mRNA_M-pyrifera_M_contig83070.19403.1 (mRNA) Macrocystis pyrifera P11B4 male
Overview
Homology
BLAST of mRNA_M-pyrifera_M_contig83070.19403.1 vs. uniprot
Match: UPI0005297078 (ubiquitin conjugation factor E4 B n=1 Tax=Chlamydotis macqueenii TaxID=187382 RepID=UPI0005297078) HSP 1 Score: 200 bits (509), Expect = 1.320e-58 Identity = 101/226 (44.69%), Postives = 141/226 (62.39%), Query Frame = 1 Query: 19 KEQEFGQSERTVQSYMQLVNAVVSLFHSIASEVPDACMRPELVERIANFLNYYLSLLAGPKCRELKVENKDKYHFEPKTLLGEIVDIYVHLNCSTFRDACANDGRSYADTTYRSAIDIVSRLGLRSEKTLKLFAEFVAGVQQRSEEKKTADIALDDAPDEYLDPIMSEVMKDPVRLPSGNIVDRSVISRHLLSDPTDPFTRGPLTLQDLEPMQELKEEIQGWLLSK 696 ++ + Q ER +SY+ L V +FH + +V +RPEL R+A LN+ L L GPKCR+LKVEN +KY FEPK LL ++ DIY+ L+C+ F A A+D RSY+ + I + + G++S ++ F V++ + A+I DAPDE+ DP+M +M DPVRLPSG I+DRS+I RHLL+ TDPF R LT LEP+ ELKE+IQ W+ K Sbjct: 208 RQSQLAQDERVSRSYLALATETVDMFHILTKQVQKPFLRPELGPRLAAMLNFNLQQLCGPKCRDLKVENPEKYGFEPKKLLDQLTDIYLQLDCARFAKAIADDQRSYSKELFEEVISKMRKAGIKSTIAIEKFKLLAEKVEEIVAKNARAEIDYSDAPDEFRDPLMDTLMTDPVRLPSGTIMDRSIILRHLLNSSTDPFNRQTLTENMLEPVPELKEQIQAWMRDK 433
BLAST of mRNA_M-pyrifera_M_contig83070.19403.1 vs. uniprot
Match: UPI0009A3423E (ubiquitin conjugation factor E4 B-like n=1 Tax=Rhincodon typus TaxID=259920 RepID=UPI0009A3423E) HSP 1 Score: 198 bits (504), Expect = 1.040e-57 Identity = 101/226 (44.69%), Postives = 141/226 (62.39%), Query Frame = 1 Query: 19 KEQEFGQSERTVQSYMQLVNAVVSLFHSIASEVPDACMRPELVERIANFLNYYLSLLAGPKCRELKVENKDKYHFEPKTLLGEIVDIYVHLNCSTFRDACANDGRSYADTTYRSAIDIVSRLGLRSEKTLKLFAEFVAGVQQRSEEKKTADIALDDAPDEYLDPIMSEVMKDPVRLPSGNIVDRSVISRHLLSDPTDPFTRGPLTLQDLEPMQELKEEIQGWLLSK 696 ++ + Q ER +SY+ L V +FH + +V +RPEL R+A LN+ L L GPKCR+LKVEN +KY FEPK LL ++ DIY+HL+C F A A+D RSY+ + I + + G++S ++ F V++ + A+I DAPDE+ DP+M +M DPV+LPSG I+DRS+I RHLL+ PTDPF R LT LEP+ ELKE+I W+ K Sbjct: 220 RQSQLTQDERVSRSYLALGAETVDMFHYLTKQVQKPFLRPELGPRLAAMLNFNLQQLCGPKCRDLKVENPEKYGFEPKKLLDQLTDIYLHLDCPRFAKAIADDQRSYSKELFDEVISKMRKAGIKSTIAIEKFRLLAEKVEEIVTKNARAEIDYGDAPDEFRDPLMDTLMNDPVKLPSGTIMDRSIILRHLLNSPTDPFNRQHLTENMLEPVPELKEKIHAWMKEK 445
BLAST of mRNA_M-pyrifera_M_contig83070.19403.1 vs. uniprot
Match: UPI001B35150A (ubiquitin conjugation factor E4 B isoform X4 n=1 Tax=Ochotona curzoniae TaxID=130825 RepID=UPI001B35150A) HSP 1 Score: 206 bits (525), Expect = 1.340e-57 Identity = 103/226 (45.58%), Postives = 143/226 (63.27%), Query Frame = 1 Query: 19 KEQEFGQSERTVQSYMQLVNAVVSLFHSIASEVPDACMRPELVERIANFLNYYLSLLAGPKCRELKVENKDKYHFEPKTLLGEIVDIYVHLNCSTFRDACANDGRSYADTTYRSAIDIVSRLGLRSEKTLKLFAEFVAGVQQRSEEKKTADIALDDAPDEYLDPIMSEVMKDPVRLPSGNIVDRSVISRHLLSDPTDPFTRGPLTLQDLEPMQELKEEIQGWLLSK 696 ++ + Q ER +SY+ L V +FH + +V +RPEL R+A LN+ L L GPKCR+LKVEN +KY FEPK LL ++ DIY+ L+C+ F A A+D RSY+ + I + + G++S ++ F V++ + A+I DAPDE+ DP+M +M DPVRLPSG I+DRS+I RHLL+ PTDPF R PLT LEP+ ELKE+IQ W+ K Sbjct: 821 RQSQLAQDERVSRSYLALATETVDMFHILTKQVQKPFLRPELGPRLAAMLNFNLQQLCGPKCRDLKVENPEKYGFEPKKLLDQLTDIYLQLDCARFAKAIADDQRSYSKELFEEVISKMRKAGIKSTIAIEKFKLLAEKVEEIVAKNARAEIDYSDAPDEFRDPLMDTLMTDPVRLPSGTIMDRSIILRHLLNSPTDPFNRQPLTESMLEPVPELKEQIQAWMREK 1046
BLAST of mRNA_M-pyrifera_M_contig83070.19403.1 vs. uniprot
Match: A0A5F9CDE9_RABIT (Ubiquitination factor E4B n=2 Tax=Oryctolagus cuniculus TaxID=9986 RepID=A0A5F9CDE9_RABIT) HSP 1 Score: 206 bits (525), Expect = 1.680e-57 Identity = 103/226 (45.58%), Postives = 143/226 (63.27%), Query Frame = 1 Query: 19 KEQEFGQSERTVQSYMQLVNAVVSLFHSIASEVPDACMRPELVERIANFLNYYLSLLAGPKCRELKVENKDKYHFEPKTLLGEIVDIYVHLNCSTFRDACANDGRSYADTTYRSAIDIVSRLGLRSEKTLKLFAEFVAGVQQRSEEKKTADIALDDAPDEYLDPIMSEVMKDPVRLPSGNIVDRSVISRHLLSDPTDPFTRGPLTLQDLEPMQELKEEIQGWLLSK 696 ++ + Q ER +SY+ L V +FH + +V +RPEL R+A LN+ L L GPKCR+LKVEN +KY FEPK LL ++ DIY+ L+C+ F A A+D RSY+ + I + + G++S ++ F V++ + A+I DAPDE+ DP+M +M DPVRLPSG I+DRS+I RHLL+ PTDPF R PLT LEP+ ELKE+IQ W+ K Sbjct: 943 RQSQLAQDERVSRSYLALATETVDMFHILTKQVQKPFLRPELGPRLAAMLNFNLQQLCGPKCRDLKVENPEKYGFEPKKLLDQLTDIYLQLDCARFAKAIADDQRSYSKELFEEVISKMRKAGIKSTIAIEKFKLLAEKVEEIVAKNARAEIDYSDAPDEFRDPLMDTLMTDPVRLPSGTIMDRSIILRHLLNSPTDPFNRQPLTESMLEPVPELKEQIQAWMREK 1168
BLAST of mRNA_M-pyrifera_M_contig83070.19403.1 vs. uniprot
Match: A0A3N0YLA0_ANAGA (Ubiquitin conjugation factor E4 B n=1 Tax=Anabarilius grahami TaxID=495550 RepID=A0A3N0YLA0_ANAGA) HSP 1 Score: 205 bits (521), Expect = 4.760e-57 Identity = 102/226 (45.13%), Postives = 143/226 (63.27%), Query Frame = 1 Query: 19 KEQEFGQSERTVQSYMQLVNAVVSLFHSIASEVPDACMRPELVERIANFLNYYLSLLAGPKCRELKVENKDKYHFEPKTLLGEIVDIYVHLNCSTFRDACANDGRSYADTTYRSAIDIVSRLGLRSEKTLKLFAEFVAGVQQRSEEKKTADIALDDAPDEYLDPIMSEVMKDPVRLPSGNIVDRSVISRHLLSDPTDPFTRGPLTLQDLEPMQELKEEIQGWLLSK 696 ++ + Q ER +SY+ L V +FH + +V +RPEL R+A LNY L L GPKCR+LKVEN +KY FEPK LL ++ DIY+ L+C+ F A A+D RSY+ + I + + G++S ++ F + V++ +++ DAPDE+ DP+M +M DPV+LPSGNI+DRS+I RHLL+ PTDPF R PLT LEP+ ELKE IQ W+ K Sbjct: 825 RQSQLTQDERVSRSYLALATETVDMFHILTKQVQKPFLRPELGPRLAAMLNYNLQQLCGPKCRDLKVENPEKYGFEPKKLLDQLTDIYLQLDCARFAKAIADDQRSYSRELFEEVISKMRKAGIKSTIAIEKFKLLLEKVEEIVARNSQSEMDYSDAPDEFKDPLMDTLMTDPVQLPSGNIMDRSIILRHLLNSPTDPFNRQPLTESMLEPVPELKERIQAWMREK 1050
BLAST of mRNA_M-pyrifera_M_contig83070.19403.1 vs. uniprot
Match: A0A8C5PHJ0_9ANUR (Ubiquitination factor E4B n=3 Tax=Anura TaxID=8342 RepID=A0A8C5PHJ0_9ANUR) HSP 1 Score: 204 bits (520), Expect = 7.920e-57 Identity = 103/226 (45.58%), Postives = 141/226 (62.39%), Query Frame = 1 Query: 19 KEQEFGQSERTVQSYMQLVNAVVSLFHSIASEVPDACMRPELVERIANFLNYYLSLLAGPKCRELKVENKDKYHFEPKTLLGEIVDIYVHLNCSTFRDACANDGRSYADTTYRSAIDIVSRLGLRSEKTLKLFAEFVAGVQQRSEEKKTADIALDDAPDEYLDPIMSEVMKDPVRLPSGNIVDRSVISRHLLSDPTDPFTRGPLTLQDLEPMQELKEEIQGWLLSK 696 K+ + Q ER +SY+ L V +FH + +V +RPEL R+A LN+ L L GPKCR+LKVEN +KY FEPK LL ++ DIY+HL+C F A A+D RSY+ + I + + G++S ++ F V++ A+I DAPDE+ DP+M +M +PVRLPSGNI+DRS+I RHLL+ TDPF R LT LEP+ ELKE IQ W+ +K Sbjct: 942 KQSQLAQDERVSRSYLALATETVEMFHILTKQVQKPFLRPELGPRLAAMLNFNLQQLCGPKCRDLKVENPEKYGFEPKKLLDQLTDIYLHLDCPRFAKAIADDQRSYSKDLFEEVISKMRKAGIKSTIAVEKFKLLAEKVEETVARNARAEIDYSDAPDEFRDPLMDTLMSEPVRLPSGNIMDRSIILRHLLNSSTDPFNRQTLTENMLEPVPELKERIQAWMQNK 1167
BLAST of mRNA_M-pyrifera_M_contig83070.19403.1 vs. uniprot
Match: A0A6P6M8Q6_CARAU (ubiquitin conjugation factor E4 B-like isoform X2 n=9 Tax=Cyprininae TaxID=2743694 RepID=A0A6P6M8Q6_CARAU) HSP 1 Score: 204 bits (520), Expect = 8.460e-57 Identity = 102/226 (45.13%), Postives = 143/226 (63.27%), Query Frame = 1 Query: 19 KEQEFGQSERTVQSYMQLVNAVVSLFHSIASEVPDACMRPELVERIANFLNYYLSLLAGPKCRELKVENKDKYHFEPKTLLGEIVDIYVHLNCSTFRDACANDGRSYADTTYRSAIDIVSRLGLRSEKTLKLFAEFVAGVQQRSEEKKTADIALDDAPDEYLDPIMSEVMKDPVRLPSGNIVDRSVISRHLLSDPTDPFTRGPLTLQDLEPMQELKEEIQGWLLSK 696 ++ + Q ER +SY+ L V +FH + +V +RPEL R+A LNY L L GPKCR+LKVEN +KY FEPK LL ++ DIY+ L+C+ F A A+D RSY+ + I + + G++S ++ F + V++ +++ DAPDE+ DP+M +M DPV+LPSGNI+DRS+I RHLL+ PTDPF R PLT LEP+ ELKE IQ W+ K Sbjct: 1076 RQSQLTQDERVSRSYLALATETVDMFHILTKQVQKPFLRPELGPRLAAMLNYNLQQLCGPKCRDLKVENPEKYGFEPKKLLDQLTDIYLQLDCARFAKAIADDQRSYSRELFEEVISKMRKAGIKSTIAIEKFKLLLEKVEEIVARNSQSEMDYGDAPDEFKDPLMDTLMTDPVQLPSGNIMDRSIILRHLLNSPTDPFNRQPLTESMLEPVPELKERIQAWMRGK 1301
BLAST of mRNA_M-pyrifera_M_contig83070.19403.1 vs. uniprot
Match: A0A6P6M9U0_CARAU (ubiquitin conjugation factor E4 B-like isoform X1 n=2 Tax=Carassius auratus TaxID=7957 RepID=A0A6P6M9U0_CARAU) HSP 1 Score: 204 bits (520), Expect = 8.520e-57 Identity = 102/226 (45.13%), Postives = 143/226 (63.27%), Query Frame = 1 Query: 19 KEQEFGQSERTVQSYMQLVNAVVSLFHSIASEVPDACMRPELVERIANFLNYYLSLLAGPKCRELKVENKDKYHFEPKTLLGEIVDIYVHLNCSTFRDACANDGRSYADTTYRSAIDIVSRLGLRSEKTLKLFAEFVAGVQQRSEEKKTADIALDDAPDEYLDPIMSEVMKDPVRLPSGNIVDRSVISRHLLSDPTDPFTRGPLTLQDLEPMQELKEEIQGWLLSK 696 ++ + Q ER +SY+ L V +FH + +V +RPEL R+A LNY L L GPKCR+LKVEN +KY FEPK LL ++ DIY+ L+C+ F A A+D RSY+ + I + + G++S ++ F + V++ +++ DAPDE+ DP+M +M DPV+LPSGNI+DRS+I RHLL+ PTDPF R PLT LEP+ ELKE IQ W+ K Sbjct: 1112 RQSQLTQDERVSRSYLALATETVDMFHILTKQVQKPFLRPELGPRLAAMLNYNLQQLCGPKCRDLKVENPEKYGFEPKKLLDQLTDIYLQLDCARFAKAIADDQRSYSRELFEEVISKMRKAGIKSTIAIEKFKLLLEKVEEIVARNSQSEMDYGDAPDEFKDPLMDTLMTDPVQLPSGNIMDRSIILRHLLNSPTDPFNRQPLTESMLEPVPELKERIQAWMRGK 1337
BLAST of mRNA_M-pyrifera_M_contig83070.19403.1 vs. uniprot
Match: A0A673I932_9TELE (Ubiquitin conjugation factor E4 B-like n=7 Tax=Cyprininae TaxID=2743694 RepID=A0A673I932_9TELE) HSP 1 Score: 202 bits (513), Expect = 9.180e-57 Identity = 100/226 (44.25%), Postives = 143/226 (63.27%), Query Frame = 1 Query: 19 KEQEFGQSERTVQSYMQLVNAVVSLFHSIASEVPDACMRPELVERIANFLNYYLSLLAGPKCRELKVENKDKYHFEPKTLLGEIVDIYVHLNCSTFRDACANDGRSYADTTYRSAIDIVSRLGLRSEKTLKLFAEFVAGVQQRSEEKKTADIALDDAPDEYLDPIMSEVMKDPVRLPSGNIVDRSVISRHLLSDPTDPFTRGPLTLQDLEPMQELKEEIQGWLLSK 696 ++ + Q ER +SY+ L V +FH + +V +RPEL R+A LNY L L GPKCR+LKVEN +KY FEPK LL ++ DIY+ L+C+ F A A+D RSY+ + I + + G++S ++ F + V++ +++ +DAPDE+ DP+M +M DPV+LPSGNI+DR++I RHLL+ PTDPF R PLT LEP+ ELK IQ W+ K Sbjct: 530 RQSQLTQDERVSRSYLALATETVDMFHILTKQVQKPFLRPELGPRLAAMLNYNLQQLCGPKCRDLKVENPEKYGFEPKKLLDQLTDIYLQLDCARFAKAIADDQRSYSRELFEEVISKMRKAGIKSTIAIEKFKLLLEKVEEIVARNSQSEMDYNDAPDEFKDPLMDTLMTDPVQLPSGNIMDRAIILRHLLNSPTDPFNRQPLTESMLEPVPELKARIQAWMREK 755
BLAST of mRNA_M-pyrifera_M_contig83070.19403.1 vs. uniprot
Match: Q8JIX0_DANRE (Ubiquitination factor E4/UFD2 n=19 Tax=Otophysi TaxID=186626 RepID=Q8JIX0_DANRE) HSP 1 Score: 204 bits (519), Expect = 1.090e-56 Identity = 102/226 (45.13%), Postives = 142/226 (62.83%), Query Frame = 1 Query: 19 KEQEFGQSERTVQSYMQLVNAVVSLFHSIASEVPDACMRPELVERIANFLNYYLSLLAGPKCRELKVENKDKYHFEPKTLLGEIVDIYVHLNCSTFRDACANDGRSYADTTYRSAIDIVSRLGLRSEKTLKLFAEFVAGVQQRSEEKKTADIALDDAPDEYLDPIMSEVMKDPVRLPSGNIVDRSVISRHLLSDPTDPFTRGPLTLQDLEPMQELKEEIQGWLLSK 696 ++ + Q ER +SY+ L V +FH + +V +RPEL R+A LNY L L GPKCR+LKVEN +KY FEPK LL ++ DIY+ L+C F A A+D RSY+ + I + + G++S ++ F + V++ +++ DAPDE+ DP+M +M DPV+LPSGNI+DRS+I RHLL+ PTDPF R PLT LEP+ ELKE IQ W+ K Sbjct: 953 RQSQLTQDERVSRSYLALATETVDMFHILTKQVQKPFLRPELGPRLAAMLNYNLQQLCGPKCRDLKVENPEKYGFEPKKLLDQLTDIYLQLDCPRFAKAIADDQRSYSRELFEEVISKMRKAGIKSTIAIEKFKLLLEKVEEIVARNSQSEMDYSDAPDEFKDPLMDTLMTDPVQLPSGNIMDRSIILRHLLNSPTDPFNRQPLTESMLEPVPELKERIQAWMREK 1178 The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig83070.19403.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_M-pyrifera_M_contig83070.19403.1 >prot_M-pyrifera_M_contig83070.19403.1 ID=prot_M-pyrifera_M_contig83070.19403.1|Name=mRNA_M-pyrifera_M_contig83070.19403.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=237bp QQERAEKEQEFGQSERTVQSYMQLVNAVVSLFHSIASEVPDACMRPELVEback to top mRNA from alignment at M-pyrifera_M_contig83070:26..856+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_M-pyrifera_M_contig83070.19403.1 ID=mRNA_M-pyrifera_M_contig83070.19403.1|Name=mRNA_M-pyrifera_M_contig83070.19403.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=831bp|location=Sequence derived from alignment at M-pyrifera_M_contig83070:26..856+ (Macrocystis pyrifera P11B4 male)back to top Coding sequence (CDS) from alignment at M-pyrifera_M_contig83070:26..856+ >mRNA_M-pyrifera_M_contig83070.19403.1 ID=mRNA_M-pyrifera_M_contig83070.19403.1|Name=mRNA_M-pyrifera_M_contig83070.19403.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=1422bp|location=Sequence derived from alignment at M-pyrifera_M_contig83070:26..856+ (Macrocystis pyrifera P11B4 male)back to top |