mRNA_M-pyrifera_M_contig83038.19401.1 (mRNA) Macrocystis pyrifera P11B4 male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_M-pyrifera_M_contig83038.19401.1
Unique NamemRNA_M-pyrifera_M_contig83038.19401.1
TypemRNA
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Homology
BLAST of mRNA_M-pyrifera_M_contig83038.19401.1 vs. uniprot
Match: L8GVC3_ACACA (3hydroxyacyl-CoA dehydrogenase, NAD binding domain containing protein n=1 Tax=Acanthamoeba castellanii str. Neff TaxID=1257118 RepID=L8GVC3_ACACA)

HSP 1 Score: 213 bits (543), Expect = 1.730e-61
Identity = 128/301 (42.52%), Postives = 188/301 (62.46%), Query Frame = 1
Query:    1 IDSPPVNSLSRPVVEGLLAAVNAANENDAVKSIVIHGANDNFVAGADIGELKQAAKLAIQENPPQTDGEA-EVAANLAAALEDLEANAKPIVMAIDGFALGGGLELAMSGQRRIGTSRCRVGLPELTLGLIPGAAGTQRLPRIVGPQLAAEMMLTSRQAKAAEALETGILQEVV---EPDELLDAALAAARKLAAGDLTPVRASQDSSKLPSAEEAKQLVEMATGMMGAKGRNLVHPHLCLDAMLCGITDGYAAGLKREEENFRKCLASSQAQGLIHMFFSPRAATKVPGVTDQGLKPAKI 891
            ID+PPVN+LSR V +GL+   + A E+D VK +VI GAN  FVAGA+I  ++ + +L ++  P + D ++  +     A L  LE+ +KP+V A+D FALGGGLE+AM+   R+ T R ++GLPEL LG+IPG  GTQRLPR+VG + A +MML+SR  KA EA   G++ EVV   +P +L+DAA+   +++A G    VRA+Q + +L    EAK++++            +VHP  CLDA+  G+  G ++G+  E      CL +  ++ + H FF+ R    V GVTDQGL+P  I
Sbjct:   67 IDNPPVNALSRGVFDGLIRLTHEALEDDNVKLLVITGANQKFVAGAEIASIQDSIEL-LRNTPDRLDADSMRLMEREHAWLNWLESQSKPVVAAMDTFALGGGLEVAMACHARVATRRTKLGLPELALGVIPGLGGTQRLPRLVGMKKAVDMMLSSRSLKADEAKNLGLVDEVVGGSDPAQLIDAAITVGKEIAEGMRPFVRATQLTDRLEPLPEAKKIIDERA----YPPNTVVHPFACLDAVQAGVQMGGSSGVDAERRAVVACLYNDASEAMTHAFFAERKTANVSGVTDQGLQPRPI 362          
BLAST of mRNA_M-pyrifera_M_contig83038.19401.1 vs. uniprot
Match: A0A7J7PU00_9CHLO (ClpP/crotonase-like domain-containing protein n=1 Tax=Scenedesmus sp. NREL 46B-D3 TaxID=2650976 RepID=A0A7J7PU00_9CHLO)

HSP 1 Score: 206 bits (523), Expect = 1.830e-57
Identity = 125/298 (41.95%), Postives = 175/298 (58.72%), Query Frame = 1
Query:    1 IDSPPVNSLSRPVVEGLLAAVNAANENDAVKSIVIHGANDNFVAGADIGEL-KQAAKLAIQENPPQTDGEAEVAANLAAALEDLEANAKPIVMAIDGFALGGGLELAMSGQRRIGTSRCRVGLPELTLGLIPGAAGTQRLPRIVGPQLAAEMMLTSRQAKAAEALETGILQEVVEPDELLDAALAAARKLAAGDLTPVRASQDSSKLPSAEEAKQLVEMATGMMGAKGRNLVHPHLCLDAMLCGITDGYAAGLKREEENFRKCLASSQAQGLIHMFFSPRAATKVPGVTDQGLKPAKI 891
            + +PPVN+L   V++GL  ++  A+ + +VK++V+ G+  NF AG DI +  KQ+    I  N   +              E LE  AKP V AI G ALGGGLE+AM    R+G+  CR+GLPEL LG+IPG  GTQRLPR+VG Q   +MMLTS       AL+ G+L  VV   +LLDAA   A  +A+G L  + + Q + +L +  EA  +++ A      + R+L HP LCLDA+  G+  G AAGLK+E E F    A    + L+H+FF+ R+  KV GV+D GL+P K+
Sbjct:   19 LSNPPVNALHPAVLKGLFDSLTRAHADPSVKAVVVTGSGKNFSAGFDINQFQKQSGGGGIGNNINDS------------ICEVLEGGAKPTVAAIQGVALGGGLEVAMGCNARVGSPGCRLGLPELQLGIIPGFGGTQRLPRLVGLQQGIQMMLTSTPIGDKAALKAGLLDAVVPAPQLLDAARRRALDIASGRLPRLFSLQRTDRLEAYGEAMAVIDFARAQAAKRARHLRHPQLCLDAIQAGVAYGGAAGLKKEGEAFAAAAALDTHKALVHIFFATRSTKKVAGVSDAGLQPRKV 304          
BLAST of mRNA_M-pyrifera_M_contig83038.19401.1 vs. uniprot
Match: A0A0C9RSC5_9SPER (TSA: Wollemia nobilis Ref_Wollemi_Transcript_15269_2665 transcribed RNA sequence n=1 Tax=Wollemia nobilis TaxID=56998 RepID=A0A0C9RSC5_9SPER)

HSP 1 Score: 204 bits (519), Expect = 6.170e-57
Identity = 128/299 (42.81%), Postives = 176/299 (58.86%), Query Frame = 1
Query:    1 IDSPPVNSLSRPVVEGLLAAVNAANENDAVKSIVIHGANDNFVAGADIGELKQAAKLAIQENPPQTDGEAEVAANLAAAL--EDLEANAKPIVMAIDGFALGGGLELAMSGQRRIGTSRCRVGLPELTLGLIPGAAGTQRLPRIVGPQLAAEMMLTSRQAKAAEALETGILQEVVEPDELLDAALAAARKLAAGDLTPVRASQDSSKLPSAEEAKQLVEMATGMMGAKGRNLVHPHLCLDAMLCGITDGYAAGLKREEENFRKCLASSQAQGLIHMFFSPRAATKVPGVTDQGLKPAKI 891
            I +PPVNSLS PV+ GL      A + D VK+IVI G+N  F  G DIG L             Q+ GE   + +++  +  E LE   KP V AI+G ALGGGLE+AM+   RI   + ++GLPEL LG+IPG  GTQRLPR+VG   A EM+L S+  K+ EA E G++  +V P ELL+ A   A  +A      +R+   + KL    EA+++++        +  NL HP +CLD M  GI  G  AGL++E  +F++ L S  A+ LIH+FF+ R+ +KVPGVTD GL P +I
Sbjct:   20 ISNPPVNSLSIPVLLGLKDKYEEAMQRDDVKAIVITGSNGKFSGGFDIGTLGNV----------QSGGELPKSVDISVGIITESLEGGRKPSVAAIEGLALGGGLEIAMACHGRIAAPQAQLGLPELQLGVIPGFGGTQRLPRLVGLSKALEMILLSKPIKSEEASELGLVDAIVAPAELLNTACRWALDIAECRRPWIRSLYRTDKLEPLGEAREILKFTRMQAQKRAANLKHPLVCLDVMEEGIVSGPMAGLRKEASSFQELLKSDTAKALIHIFFAQRSTSKVPGVTDLGLVPKRI 308          
BLAST of mRNA_M-pyrifera_M_contig83038.19401.1 vs. uniprot
Match: A0A1Y1IKS8_KLENI (Enoyl-CoA hydratase n=1 Tax=Klebsormidium nitens TaxID=105231 RepID=A0A1Y1IKS8_KLENI)

HSP 1 Score: 203 bits (516), Expect = 1.660e-56
Identity = 122/295 (41.36%), Postives = 178/295 (60.34%), Query Frame = 1
Query:    7 SPPVNSLSRPVVEGLLAAVNAANENDAVKSIVIHGANDNFVAGADIGELKQAAKLAIQENPPQTDGEAEVAANLAAALEDLEANAKPIVMAIDGFALGGGLELAMSGQRRIGTSRCRVGLPELTLGLIPGAAGTQRLPRIVGPQLAAEMMLTSRQAKAAEALETGILQEVVEPDELLDAALAAARKLAAGDLTPVRASQDSSKLPSAEEAKQLVEMATGMMGAKGRNLVHPHLCLDAMLCGITDGYAAGLKREEENFRKCLASSQAQGLIHMFFSPRAATKVPGVTDQGLKPAKI 891
            +PPVN+L+  V++GL  A + A+    VK+IV+ GAN  F  G DI  + Q      Q+   +     +V+ +L   ++ +E+  KP V AI+G ALGGGLELAMS   R+   + ++GLPELTLG+IPG  GTQRLPR+ G   A EMML S+  KA E  E G++ E+V  ++LL AA   A  LA+G    V++ + S K+   ++A ++++ A     A   N+ HP  CLDA+  G+  G   G ++E E F++ + S  ++ L H+FF+ RA TKV GVTD+GLKP  I
Sbjct:   21 NPPVNALAPAVLKGLKEAFDEAHHRKDVKAIVVTGANGRFSGGFDISAIVQ------QQERGEIASLGDVSTDLM--IKTVESGPKPAVAAIEGLALGGGLELAMSCHARLSAPKAQLGLPELTLGIIPGFGGTQRLPRLTGLAKAVEMMLLSKPIKAEEGKELGLIDEIVPLNQLLSAARKVALDLASGRRPLVKSLERSDKIEELDDALEIIKFARKQARATAPNVNHPQACLDAVEAGVRHGGYEGNRKEAEVFKELVLSDTSKALTHVFFAQRATTKVAGVTDKGLKPRPI 307          
BLAST of mRNA_M-pyrifera_M_contig83038.19401.1 vs. uniprot
Match: A0A7V9SHK5_9BACT (3-hydroxyacyl-CoA dehydrogenase (Fragment) n=1 Tax=Acidobacteria bacterium TaxID=1978231 RepID=A0A7V9SHK5_9BACT)

HSP 1 Score: 195 bits (495), Expect = 4.130e-56
Identity = 126/287 (43.90%), Postives = 175/287 (60.98%), Query Frame = 1
Query:    1 IDSPPVNSLSRPVVEGLLAAVNAANENDAVKSIVIHGANDNFVAGADIGELKQAAKLAIQENPPQTDGEAEVAANLAAALEDLEANAKPIVMAIDGFALGGGLELAMSGQRRIGTSRCRVGLPELTLGLIPGAAGTQRLPRIVGPQLAAEMMLTSRQAKAAEALETGILQEVVEPDELLDAALAAARKLAAGDLTPVRASQDSSKLPSAEEAKQLVEMATGMMGAKGRNLVHPHLCLDAMLCGITDGYAAGLKREEENFRKCLASSQAQGLIHMFFSPRAATKVPGV 861
            +D+PPVN+LS  V E +  A+ AA E+ ++ +IV+ GA   FVAGADI  L++AA     E+P         A +L   L  +E  AKP+VMAI G ALGGGLE+AM+G  R+  +   +G PE+ LG+IPGA GTQRLPR+VG + A +M +T +  KA EAL  G+L  V+E D L D A+A AR  AA  L  V+  +   +L +A+E   L E A  ++G   R+   P   +DA+    T  +A G +RE E F +CL + QA+ LIH+FF+ RA +KV GV
Sbjct:   18 VDNPPVNALSPGVPEAIAQAIAAAQEDPSISAIVLKGAGRTFVAGADIAMLEKAA----WEDPA-------AAVDLHGLLARIEDCAKPVVMAIHGTALGGGLEVAMAGHFRVAVAEALLGQPEVNLGIIPGAEGTQRLPRLVGIRQALDMCVTGKPLKAREALAAGLLDSVIEGD-LTDGAVAFARD-AAAKLPRVKTRERLDRLGTADENAPLFEAARELVGKTRRHQSAPLRAVDAIEAAATMPFAEGCRRERELFVECLGTDQAKALIHLFFAERAVSKVRGV 291          
BLAST of mRNA_M-pyrifera_M_contig83038.19401.1 vs. uniprot
Match: A0A0C9RPJ6_9SPER (TSA: Wollemia nobilis Ref_Wollemi_Transcript_5333_2695 transcribed RNA sequence n=2 Tax=Araucariaceae TaxID=25664 RepID=A0A0C9RPJ6_9SPER)

HSP 1 Score: 202 bits (513), Expect = 4.550e-56
Identity = 123/297 (41.41%), Postives = 174/297 (58.59%), Query Frame = 1
Query:    1 IDSPPVNSLSRPVVEGLLAAVNAANENDAVKSIVIHGANDNFVAGADIGELKQAAKLAIQENPPQTDGEAEVAANLAAALEDLEANAKPIVMAIDGFALGGGLELAMSGQRRIGTSRCRVGLPELTLGLIPGAAGTQRLPRIVGPQLAAEMMLTSRQAKAAEALETGILQEVVEPDELLDAALAAARKLAAGDLTPVRASQDSSKLPSAEEAKQLVEMATGMMGAKGRNLVHPHLCLDAMLCGITDGYAAGLKREEENFRKCLASSQAQGLIHMFFSPRAATKVPGVTDQGLKPAKI 891
            + +PPVN+L+ P++ G+    N A   + VK+IV+ G    F  G DI  L+ A K    +   +      V+ +L   +  +E  +KP V AI G ALGGGLELAMS   RI T R ++GLPEL+LG++PG  GTQRLPR+VG Q A EMML S+   + E  + G++  +V P+EL+  A   A ++       +++ + + KL S  EA+++++ A         NL HP LCLD +  GI  G  AG+ REE  F   + S  A+GL+H FFS RA +KVPGVTD GLKP +I
Sbjct:   20 LTNPPVNALAIPILAGIKEKYNEAMRRNDVKAIVVTGEGGKFSGGFDISALQDAQKTGDIKRLGR------VSVDLM--INTIEDASKPSVAAIQGLALGGGLELAMSCHARISTPRAQLGLPELSLGILPGFGGTQRLPRLVGVQKAVEMMLLSKPITSEEGKKLGLIDALVSPEELMTTARMWALEIVERRKPWIKSLERTDKLESLGEAREILKFARAQAKKTAPNLPHPQLCLDVIEEGIVSGGFAGVLREEAGFFNIVLSETAKGLVHFFFSQRATSKVPGVTDLGLKPRQI 308          
BLAST of mRNA_M-pyrifera_M_contig83038.19401.1 vs. uniprot
Match: A0A6P6WR29_COFAR (glyoxysomal fatty acid beta-oxidation multifunctional protein MFP-a-like n=1 Tax=Coffea arabica TaxID=13443 RepID=A0A6P6WR29_COFAR)

HSP 1 Score: 195 bits (495), Expect = 3.120e-55
Identity = 124/297 (41.75%), Postives = 171/297 (57.58%), Query Frame = 1
Query:    1 IDSPPVNSLSRPVVEGLLAAVNAANENDAVKSIVIHGANDNFVAGADIGELKQAAKLAIQENPPQTDGEAEVAANLAAALEDLEANAKPIVMAIDGFALGGGLELAMSGQRRIGTSRCRVGLPELTLGLIPGAAGTQRLPRIVGPQLAAEMMLTSRQAKAAEALETGILQEVVEPDELLDAALAAARKLAAGDLTPVRASQDSSKLPSAEEAKQLVEMATGMMGAKGRNLVHPHLCLDAMLCGITDGYAAGLKREEENFRKCLASSQAQGLIHMFFSPRAATKVPGVTDQGLKPAKI 891
            I +PPVNSLS  V+  L  +   A   D VK+IV+ G+N  F  G DI      A   IQE          V+  + +  + ++A  KP V AIDG ALGGGLE+AM+   RI TS  ++GLPEL LG++PG  GTQRLPR+VG   + EMML S+  K  EAL  G++ E+  PD+LL  A   A ++       V +   + KL S  EAK++++ A   +  +  NL HP +C+D +  GI  G  AGL +E E F+  L S   + L+H+FF+ R  TKVPG+TD+GL P +I
Sbjct:   24 IFNPPVNSLSLDVLNSLKESYEQALRRDDVKAIVVIGSNGKFSGGFDI-----TAFGGIQEGKFPAPKPGFVSIEILS--DTVDAATKPSVAAIDGLALGGGLEVAMACHARISTSNAQLGLPELQLGILPGFGGTQRLPRLVGLAKSLEMMLMSKPVKGEEALSLGLVDEIAAPDQLLATARRWALEILDRKRPWVSSLYKTDKLESLAEAKEILKFARAQIRKQAPNLTHPLVCIDVVEEGIISGPLAGLFKEAEAFQVLLHSDTCKSLVHIFFAQRGTTKVPGITDRGLAPRRI 313          
BLAST of mRNA_M-pyrifera_M_contig83038.19401.1 vs. uniprot
Match: A0A328ECC4_9ASTE (Uncharacterized protein n=1 Tax=Cuscuta australis TaxID=267555 RepID=A0A328ECC4_9ASTE)

HSP 1 Score: 197 bits (502), Expect = 1.680e-54
Identity = 131/298 (43.96%), Postives = 170/298 (57.05%), Query Frame = 1
Query:    1 IDSPPVNSLSRPVVEGLLAAVNAANENDAVKSIVIHGANDNFVAGADIGELKQAAKLAIQENPPQTDGEAEVAANLAAALEDL-EANAKPIVMAIDGFALGGGLELAMSGQRRIGTSRCRVGLPELTLGLIPGAAGTQRLPRIVGPQLAAEMMLTSRQAKAAEALETGILQEVVEPDELLDAALAAARKLAAGDLTPVRASQDSSKLPSAEEAKQLVEMATGMMGAKGRNLVHPHLCLDAMLCGITDGYAAGLKREEENFRKCLASSQAQGLIHMFFSPRAATKVPGVTDQGLKPAKI 891
            I +PPVNSLS  V+  L  +   A   D VK+IV+ GAN  F  G DI      A   +Q     T     V+  +   L D+ EA+ KP V AIDG ALGGGLE+AM    RI T   ++GLPEL LG+IPG  GTQRLPR+VG     EMMLTS+  K  EAL  G++  VV P ELLDAA   A  +       V +   ++K+    +AK++++ A      +  NL HP +C+D +  GI  G  AGL +E E F++ L S   + L+H+FF+ R  TKVPGVTDQGL P KI
Sbjct:   21 IINPPVNSLSLDVLNSLKESYEHALNKDDVKAIVVTGANGKFSGGFDIS-----AFAGLQGGMVATPKPGFVSVEI---LSDIVEASRKPSVAAIDGLALGGGLEVAMVCHARISTPHTQLGLPELQLGIIPGFGGTQRLPRLVGLAKGLEMMLTSKPVKGQEALNLGLVDAVVSPSELLDAARRWALDIFERRKPWVTSLYRTNKIEPLGDAKEILKFARAQARKQAPNLNHPLVCIDVVEEGIVSGPRAGLWKEAEAFQELLYSDTCKALVHIFFALRGTTKVPGVTDQGLAPRKI 310          
BLAST of mRNA_M-pyrifera_M_contig83038.19401.1 vs. uniprot
Match: A0A251VBP5_HELAN (Putative crotonase superfamily n=1 Tax=Helianthus annuus TaxID=4232 RepID=A0A251VBP5_HELAN)

HSP 1 Score: 193 bits (491), Expect = 2.240e-54
Identity = 127/299 (42.47%), Postives = 170/299 (56.86%), Query Frame = 1
Query:    1 IDSPPVNSLSRPVVEGLLAAVNAANENDAVKSIVIHGANDNFVAGADIGELKQAAKLAIQENPPQTDGEAEVAANLAAAL--EDLEANAKPIVMAIDGFALGGGLELAMSGQRRIGTSRCRVGLPELTLGLIPGAAGTQRLPRIVGPQLAAEMMLTSRQAKAAEALETGILQEVVEPDELLDAALAAARKLAAGDLTPVRASQDSSKLPSAEEAKQLVEMATGMMGAKGRNLVHPHLCLDAMLCGITDGYAAGLKREEENFRKCLASSQAQGLIHMFFSPRAATKVPGVTDQGLKPAKI 891
            I +PPVNSLS  V+  L  + + A + D VK+IV+ GA   F  G DI          IQ     T G A     ++  +  + +EA  KP V AIDG ALGGGLE+AM+   RI TS  ++GLPEL LG+IPG  GTQRLPR+VG   A EMMLTS+  +  EA   G++  +V  DEL+D A   A  + A     V +   + K+    EA++++  A      +  NL HP +C+D +  GI  G  AGL +E E+F+  L S   + LIH+FF+ R  TKVPGVTD GLKP +I
Sbjct:   19 IINPPVNSLSVDVLLSLKESFDEALQRDDVKAIVVTGAKGKFSGGFDINAFG-----GIQGGKAMTTGLASKPGYVSIDILSDTVEAARKPSVAAIDGLALGGGLEVAMACHARIATSSAQLGLPELQLGIIPGFGGTQRLPRLVGLAKALEMMLTSKPLRGEEAHNLGLVDAIVPGDELVDIARKWALDILARRKPWVPSLYKTDKIEPLGEAREILNFARAQARKQAPNLQHPQVCIDVIEEGIVSGPRAGLIKEYESFQVLLKSDTCKSLIHVFFAQRGTTKVPGVTDLGLKPRQI 312          
BLAST of mRNA_M-pyrifera_M_contig83038.19401.1 vs. uniprot
Match: A0A6J1KJV6_CUCMA (glyoxysomal fatty acid beta-oxidation multifunctional protein MFP-a isoform X1 n=2 Tax=Cucurbita TaxID=3660 RepID=A0A6J1KJV6_CUCMA)

HSP 1 Score: 197 bits (500), Expect = 4.440e-54
Identity = 126/297 (42.42%), Postives = 168/297 (56.57%), Query Frame = 1
Query:    1 IDSPPVNSLSRPVVEGLLAAVNAANENDAVKSIVIHGANDNFVAGADIGELKQAAKLAIQENPPQTDGEAEVAANLAAALEDLEANAKPIVMAIDGFALGGGLELAMSGQRRIGTSRCRVGLPELTLGLIPGAAGTQRLPRIVGPQLAAEMMLTSRQAKAAEALETGILQEVVEPDELLDAALAAARKLAAGDLTPVRASQDSSKLPSAEEAKQLVEMATGMMGAKGRNLVHPHLCLDAMLCGITDGYAAGLKREEENFRKCLASSQAQGLIHMFFSPRAATKVPGVTDQGLKPAKI 891
            I +PPVNSLS  V+  L      A   D VK+IV+ GAN  F  G DI          +QE   +    + ++  +   +   EA  KP V AIDG ALGGGLE+AM+   RI T   ++GLPEL LGLIPG  GTQRLPR+VG   A EMMLTS+  K  EA   G++  +V PDEL++ A   A ++       V +   + KLPS  +A+++ + A      +  NL HP  C+D +  GI  G  AGL +E E F+  L S   +GLI++FF+ R+ TKVPGVTD GL P +I
Sbjct:   23 IINPPVNSLSFDVLFSLRDRYEEALRRDDVKAIVVTGANGKFSGGFDIASFG-----VLQEGKGKQPNVSNISIEMVTDI--FEAARKPAVAAIDGLALGGGLEVAMACHARISTPTAQLGLPELQLGLIPGFGGTQRLPRLVGLSKALEMMLTSKPIKGQEAHSLGLVDAIVPPDELINTARRWALEILDRRKPWVHSLHRTDKLPSLAKAREIFKFARAQAKKQSPNLKHPFACIDVIETGIVSGPRAGLWKEAEEFQGLLHSDTCKGLINIFFAQRSTTKVPGVTDLGLVPRRI 312          
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig83038.19401.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
L8GVC3_ACACA1.730e-6142.523hydroxyacyl-CoA dehydrogenase, NAD binding domain... [more]
A0A7J7PU00_9CHLO1.830e-5741.95ClpP/crotonase-like domain-containing protein n=1 ... [more]
A0A0C9RSC5_9SPER6.170e-5742.81TSA: Wollemia nobilis Ref_Wollemi_Transcript_15269... [more]
A0A1Y1IKS8_KLENI1.660e-5641.36Enoyl-CoA hydratase n=1 Tax=Klebsormidium nitens T... [more]
A0A7V9SHK5_9BACT4.130e-5643.903-hydroxyacyl-CoA dehydrogenase (Fragment) n=1 Tax... [more]
A0A0C9RPJ6_9SPER4.550e-5641.41TSA: Wollemia nobilis Ref_Wollemi_Transcript_5333_... [more]
A0A6P6WR29_COFAR3.120e-5541.75glyoxysomal fatty acid beta-oxidation multifunctio... [more]
A0A328ECC4_9ASTE1.680e-5443.96Uncharacterized protein n=1 Tax=Cuscuta australis ... [more]
A0A251VBP5_HELAN2.240e-5442.47Putative crotonase superfamily n=1 Tax=Helianthus ... [more]
A0A6J1KJV6_CUCMA4.440e-5442.42glyoxysomal fatty acid beta-oxidation multifunctio... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig83038contigM-pyrifera_M_contig83038:3..893 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-19
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Properties
Property NameValue
Taxonomic scopeViridiplantae
Seed ortholog score217.6
Seed ortholog evalue7.7e-54
Seed eggNOG ortholog242159.ABO95335
KEGG rclassRC00029,RC00117,RC00831,RC01095
KEGG koko:K10527
KEGG ReactionR01975,R03026,R04170,R04737,R04738,R04739,R04740,R04741,R04743,R04744,R04745,R04746,R04748,R04749,R07889,R07890,R07893,R07894,R07897,R07898
KEGG Pathwayko00071,ko00592,ko01100,ko01110,ko01212,map00071,map00592,map01100,map01110,map01212
KEGG ModuleM00087,M00113
Hectar predicted targeting categoryother localisation
GOsGO:0003674,GO:0003824,GO:0003857,GO:0004165,GO:0004300,GO:0005575,GO:0005618,GO:0005622,GO:0005623,GO:0005634,GO:0005730,GO:0005737,GO:0005777,GO:0005911,GO:0006082,GO:0006629,GO:0006631,GO:0006635,GO:0008150,GO:0008152,GO:0008692,GO:0009056,GO:0009062,GO:0009506,GO:0009514,GO:0009987,GO:0016042,GO:0016054,GO:0016491,GO:0016508,GO:0016614,GO:0016616,GO:0016829,GO:0016835,GO:0016836,GO:0016853,GO:0016854,GO:0016856,GO:0016860,GO:0016863,GO:0018812,GO:0019395,GO:0019752,GO:0030054,GO:0030258,GO:0030312,GO:0031974,GO:0031981,GO:0032787,GO:0034440,GO:0042579,GO:0043226,GO:0043227,GO:0043228,GO:0043229,GO:0043231,GO:0043232,GO:0043233,GO:0043436,GO:0044237,GO:0044238,GO:0044242,GO:0044248,GO:0044255,GO:0044281,GO:0044282,GO:0044422,GO:0044424,GO:0044428,GO:0044444,GO:0044446,GO:0044464,GO:0046395,GO:0055044,GO:0055114,GO:0070013,GO:0071704,GO:0071944,GO:0072329,GO:1901575
EggNOG free text desc.3-hydroxyacyl-CoA dehydrogenase, C-terminal domain
EggNOG OGs34H1R@3041,37J3I@33090,COG1024@1,KOG1683@2759
EC1.1.1.211,1.1.1.35,4.2.1.17
COG Functional cat.I
Best tax levelChlorophyta
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko00002,ko01000
Exons1
Model size891
Cds size891
Stop0
Start0
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622816737.520909-CDS-M-pyrifera_M_contig83038:2..8931622816737.520909-CDS-M-pyrifera_M_contig83038:2..893Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig83038 3..893 +
1692278148.8700905-CDS-M-pyrifera_M_contig83038:2..8931692278148.8700905-CDS-M-pyrifera_M_contig83038:2..893Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig83038 3..893 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig83038.19401.1prot_M-pyrifera_M_contig83038.19401.1Macrocystis pyrifera P11B4 malepolypeptideM-pyrifera_M_contig83038 3..893 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_M-pyrifera_M_contig83038.19401.1

>prot_M-pyrifera_M_contig83038.19401.1 ID=prot_M-pyrifera_M_contig83038.19401.1|Name=mRNA_M-pyrifera_M_contig83038.19401.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=297bp
IDSPPVNSLSRPVVEGLLAAVNAANENDAVKSIVIHGANDNFVAGADIGE
LKQAAKLAIQENPPQTDGEAEVAANLAAALEDLEANAKPIVMAIDGFALG
GGLELAMSGQRRIGTSRCRVGLPELTLGLIPGAAGTQRLPRIVGPQLAAE
MMLTSRQAKAAEALETGILQEVVEPDELLDAALAAARKLAAGDLTPVRAS
QDSSKLPSAEEAKQLVEMATGMMGAKGRNLVHPHLCLDAMLCGITDGYAA
GLKREEENFRKCLASSQAQGLIHMFFSPRAATKVPGVTDQGLKPAKI
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mRNA from alignment at M-pyrifera_M_contig83038:3..893+

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_M-pyrifera_M_contig83038.19401.1 ID=mRNA_M-pyrifera_M_contig83038.19401.1|Name=mRNA_M-pyrifera_M_contig83038.19401.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=891bp|location=Sequence derived from alignment at M-pyrifera_M_contig83038:3..893+ (Macrocystis pyrifera P11B4 male)
ATCGATTCGCCGCCGGTTAATTCACTCAGCCGTCCCGTCGTCGAGGGACT GCTAGCCGCTGTGAACGCTGCCAACGAGAACGATGCCGTGAAGTCCATCG TCATCCATGGAGCCAACGACAACTTCGTGGCCGGGGCCGACATTGGCGAA TTGAAGCAGGCAGCCAAGCTCGCAATTCAAGAGAACCCACCACAAACCGA TGGCGAAGCTGAAGTGGCCGCCAACCTTGCGGCGGCGCTCGAAGACCTGG AAGCCAACGCCAAGCCCATCGTGATGGCCATCGACGGCTTCGCACTGGGC GGTGGATTGGAACTGGCCATGAGCGGACAACGCCGCATCGGCACCAGCCG CTGCCGCGTGGGCTTGCCGGAGCTGACCTTGGGGCTCATTCCTGGCGCCG CGGGTACACAACGGCTGCCGCGGATCGTCGGCCCGCAGTTGGCCGCCGAG ATGATGCTCACCAGCCGGCAGGCCAAGGCCGCCGAAGCCCTGGAGACCGG CATCCTGCAAGAGGTGGTCGAGCCAGACGAACTGCTCGATGCCGCCTTGG CGGCTGCTCGCAAGCTGGCCGCCGGCGATCTCACCCCGGTTCGCGCATCG CAAGACAGCAGCAAACTACCTTCGGCCGAAGAGGCCAAACAGTTGGTCGA AATGGCCACCGGCATGATGGGAGCCAAGGGGCGCAACCTGGTGCATCCGC ATCTGTGTCTCGACGCCATGCTCTGCGGCATCACCGACGGTTACGCCGCT GGGCTGAAACGCGAAGAGGAAAACTTCCGCAAGTGCTTGGCCAGCAGTCA GGCCCAAGGGTTAATCCACATGTTCTTCTCTCCCCGCGCGGCCACCAAGG TGCCGGGGGTAACCGATCAGGGGCTCAAGCCCGCCAAAATC
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Coding sequence (CDS) from alignment at M-pyrifera_M_contig83038:3..893+

>mRNA_M-pyrifera_M_contig83038.19401.1 ID=mRNA_M-pyrifera_M_contig83038.19401.1|Name=mRNA_M-pyrifera_M_contig83038.19401.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=1782bp|location=Sequence derived from alignment at M-pyrifera_M_contig83038:3..893+ (Macrocystis pyrifera P11B4 male)
ATCGATTCGCCGCCGGTTAATTCACTCAGCCGTCCCGTCGTCGAGGGACT
GCTAGCCGCTGTGAACGCTGCCAACGAGAACGATGCCGTGAAGTCCATCG
TCATCCATGGAGCCAACGACAACTTCGTGGCCGGGGCCGACATTGGCGAA
TTGAAGCAGGCAGCCAAGCTCGCAATTCAAGAGAACCCACCACAAACCGA
TGGCGAAGCTGAAGTGGCCGCCAACCTTGCGGCGGCGCTCGAAGACCTGG
AAGCCAACGCCAAGCCCATCGTGATGGCCATCGACGGCTTCGCACTGGGC
GGTGGATTGGAACTGGCCATGAGCGGACAACGCCGCATCGGCACCAGCCG
CTGCCGCGTGGGCTTGCCGGAGCTGACCTTGGGGCTCATTCCTGGCGCCG
CGGGTACACAACGGCTGCCGCGGATCGTCGGCCCGCAGTTGGCCGCCGAG
ATGATGCTCACCAGCCGGCAGGCCAAGGCCGCCGAAGCCCTGGAGACCGG
CATCCTGCAAGAGGTGGTCGAGCCAGACGAACTGCTCGATGCCGCCTTGG
CGGCTGCTCGCAAGCTGGCCGCCGGCGATCTCACCCCGGTTCGCGCATCG
CAAGACAGCAGCAAACTACCTTCGGCCGAAGAGGCCAAACAGTTGGTCGA
AATGGCCACCGGCATGATGGGAGCCAAGGGGCGCAACCTGGTGCATCCGC
ATCTGTGTCTCGACGCCATGCTCTGCGGCATCACCGACGGTTACGCCGCT
GGGCTGAAACGCGAAGAGGAAAACTTCCGCAAGTGCTTGGCCAGCAGTCA
GGCCCAAGGGTTAATCCACATGTTCTTCTCTCCCCGCGCGGCCACCAAGG
TGCCGGGGGTAACCGATCAGGGGCTCAAGCCCGCCAAAATCATCGATTCG
CCGCCGGTTAATTCACTCAGCCGTCCCGTCGTCGAGGGACTGCTAGCCGC
TGTGAACGCTGCCAACGAGAACGATGCCGTGAAGTCCATCGTCATCCATG
GAGCCAACGACAACTTCGTGGCCGGGGCCGACATTGGCGAATTGAAGCAG
GCAGCCAAGCTCGCAATTCAAGAGAACCCACCACAAACCGATGGCGAAGC
TGAAGTGGCCGCCAACCTTGCGGCGGCGCTCGAAGACCTGGAAGCCAACG
CCAAGCCCATCGTGATGGCCATCGACGGCTTCGCACTGGGCGGTGGATTG
GAACTGGCCATGAGCGGACAACGCCGCATCGGCACCAGCCGCTGCCGCGT
GGGCTTGCCGGAGCTGACCTTGGGGCTCATTCCTGGCGCCGCGGGTACAC
AACGGCTGCCGCGGATCGTCGGCCCGCAGTTGGCCGCCGAGATGATGCTC
ACCAGCCGGCAGGCCAAGGCCGCCGAAGCCCTGGAGACCGGCATCCTGCA
AGAGGTGGTCGAGCCAGACGAACTGCTCGATGCCGCCTTGGCGGCTGCTC
GCAAGCTGGCCGCCGGCGATCTCACCCCGGTTCGCGCATCGCAAGACAGC
AGCAAACTACCTTCGGCCGAAGAGGCCAAACAGTTGGTCGAAATGGCCAC
CGGCATGATGGGAGCCAAGGGGCGCAACCTGGTGCATCCGCATCTGTGTC
TCGACGCCATGCTCTGCGGCATCACCGACGGTTACGCCGCTGGGCTGAAA
CGCGAAGAGGAAAACTTCCGCAAGTGCTTGGCCAGCAGTCAGGCCCAAGG
GTTAATCCACATGTTCTTCTCTCCCCGCGCGGCCACCAAGGTGCCGGGGG
TAACCGATCAGGGGCTCAAGCCCGCCAAAATC
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