mRNA_M-pyrifera_M_contig82985.19386.1 (mRNA) Macrocystis pyrifera P11B4 male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_M-pyrifera_M_contig82985.19386.1
Unique NamemRNA_M-pyrifera_M_contig82985.19386.1
TypemRNA
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Homology
BLAST of mRNA_M-pyrifera_M_contig82985.19386.1 vs. uniprot
Match: A0A812Y231_9DINO (Tmem67 protein (Fragment) n=2 Tax=Sar TaxID=2698737 RepID=A0A812Y231_9DINO)

HSP 1 Score: 155 bits (392), Expect = 3.310e-40
Identity = 89/208 (42.79%), Postives = 122/208 (58.65%), Query Frame = 1
Query:    1 PVPVRVTNLLDADGNAPNENA-QPEDES-DDILTRRFFVFDAATGRSGSTGVAKDDVTVVRYASAITLTFPARPDDRGLMFPPVLTVTYAERRAELFGAE-ENYHLAPATFTVHYRTDSSDFWTTAITIFAVAQTAGLVVVVIRMLNWQGKAARTPQEYAFGLRTMTRALVFLAHSFAQATFWVLFLLTGYWFVFFKLQARVFALLQD 615
            P+PVR+ N   ADG  PN +A  P  E+ DD+L+RRFF++D  +G S  T  A     ++RYA  + L+  A+   R  +  PVLTV Y ERRA+   A+ +        F V Y  + S +WT A+ +FA+ QT  +   V+RM NW  ++ RT +E    L  + R LV+LAH +A A FWV  +L  YWF FFKLQARVFALL +
Sbjct:  565 PMPVRIVNYRAADGGTPNADAYSPGAETGDDVLSRRFFLYDRVSGLS--TASAAGTPQILRYARRLVLSMRAQDTSRAKLLVPVLTVEYRERRADDVVADTDGLGRDEVEFRVLYEAEQSQYWTAAVVMFAIGQTLAVGFAVLRMFNWNRRSVRTTEEGGLSLIVLGRFLVYLAHGYAHAAFWVAVVLCAYWFAFFKLQARVFALLPE 770          
BLAST of mRNA_M-pyrifera_M_contig82985.19386.1 vs. uniprot
Match: A0A5A8C1T1_CAFRO (Uncharacterized protein n=2 Tax=Cafeteria roenbergensis TaxID=33653 RepID=A0A5A8C1T1_CAFRO)

HSP 1 Score: 155 bits (392), Expect = 3.950e-40
Identity = 89/208 (42.79%), Postives = 122/208 (58.65%), Query Frame = 1
Query:    1 PVPVRVTNLLDADGNAPNENA-QPEDES-DDILTRRFFVFDAATGRSGSTGVAKDDVTVVRYASAITLTFPARPDDRGLMFPPVLTVTYAERRAELFGAE-ENYHLAPATFTVHYRTDSSDFWTTAITIFAVAQTAGLVVVVIRMLNWQGKAARTPQEYAFGLRTMTRALVFLAHSFAQATFWVLFLLTGYWFVFFKLQARVFALLQD 615
            P+PVR+ N   ADG  PN +A  P  E+ DD+L+RRFF++D  +G S  T  A     ++RYA  + L+  A+   R  +  PVLTV Y ERRA+   A+ +        F V Y  + S +WT A+ +FA+ QT  +   V+RM NW  ++ RT +E    L  + R LV+LAH +A A FWV  +L  YWF FFKLQARVFALL +
Sbjct:  327 PMPVRIVNYRAADGGTPNADAYSPGAETGDDVLSRRFFLYDRVSGLS--TASAAGTPQILRYARRLVLSMRAQDTSRAKLLVPVLTVEYRERRADDVVADTDGLGRDEVEFRVLYEAEQSQYWTAAVVMFAIGQTLAVGFAVLRMFNWNRRSVRTTEEGGLSLIVLGRFLVYLAHGYAHAAFWVAVVLCAYWFAFFKLQARVFALLPE 532          
BLAST of mRNA_M-pyrifera_M_contig82985.19386.1 vs. uniprot
Match: K3WK50_GLOUD (Uncharacterized protein n=1 Tax=Globisporangium ultimum (strain ATCC 200006 / CBS 805.95 / DAOM BR144) TaxID=431595 RepID=K3WK50_GLOUD)

HSP 1 Score: 123 bits (308), Expect = 6.960e-29
Identity = 75/205 (36.59%), Postives = 117/205 (57.07%), Query Frame = 1
Query:    1 PVPVRVTNLLDADGNAPNENAQPEDESDDILTRRFFVFDAATGRSGSTGVAKDDVTVVRYASAITLTFPARPDDRGLMFPPVLTVTYAERRAELFGAEENYHLAPATFTVHYRTDSSDFWTTAITIFAVAQTAGLVVVVIRMLNWQGKAARTPQEYAFGLRTMTRALVFLAHSFAQATFWVLFLLTGYWFVFFKLQARVFALLQD 615
            PVPV+  N  DA G   N N + ED +DD+LT RFF++D  +G    T V +    V RYA ++TLT  A+      ++PP+L+++Y + ++ L      +H       V Y +D++ FWTTA+++F VA       VV+    WQ ++ R  +  A    ++   L+  A +FA A+F +LF++T Y+FVFFK QARV+ LL +
Sbjct:  276 PVPVQNRNYEDAKGFTINVNTRSEDVADDVLTHRFFLYDFLSG----TAVGETQPKVFRYADSMTLTIRAQTKSVDAIYPPLLSISYVDTQS-LRNTSMRFH-------VTYASDTAKFWTTAMSLFIVALGFAACRVVLHTYTWQRRSTRNEELGAAMWHSIAHVLMCSASNFAFASFGILFVMTNYFFVFFKWQARVYVLLPE 468          
BLAST of mRNA_M-pyrifera_M_contig82985.19386.1 vs. uniprot
Match: A0A5D6XN00_9STRA (Uncharacterized protein n=1 Tax=Pythium brassicum TaxID=1485010 RepID=A0A5D6XN00_9STRA)

HSP 1 Score: 119 bits (299), Expect = 1.130e-27
Identity = 75/205 (36.59%), Postives = 108/205 (52.68%), Query Frame = 1
Query:    1 PVPVRVTNLLDADGNAPNENAQPEDESDDILTRRFFVFDAATGRSGSTGVAKDDVTVVRYASAITLTFPARPDDRGLMFPPVLTVTYAERRAELFGAEENYHLAPATFTVHYRTDSSDFWTTAITIFAVAQTAGLVVVVIRMLNWQGKAARTPQEYAFGLRTMTRALVFLAHSFAQATFWVLFLLTGYWFVFFKLQARVFALLQD 615
            PVPV+  N  DA G A NEN    D SDD L+ RFF++D  +G        +   TV RYA +ITLT   R  D   ++PP+L+++YA+         +    A   F V Y +DSS FW TA  +F VA       VV++   WQ ++ R  +  A    +M   L   A + A+A+F VL  ++ Y+ +FFKLQ+ V+ LL +
Sbjct:  261 PVPVQNLNYRDAKGFAVNENTHQSDASDDFLSHRFFLYDFQSG----VAAGESKPTVYRYAKSITLTIRTRSADVQRLYPPLLSISYADT--------QTLRSATLQFHVTYASDSSGFWATATALFVVACALAACRVVLQTYTWQRRSTRNEEMEAALWHSMAHLLTCSASNAARASFAVLLAVSAYFLLFFKLQSSVYVLLPE 453          
BLAST of mRNA_M-pyrifera_M_contig82985.19386.1 vs. uniprot
Match: A0A5A8C0Z5_CAFRO (Uncharacterized protein n=1 Tax=Cafeteria roenbergensis TaxID=33653 RepID=A0A5A8C0Z5_CAFRO)

HSP 1 Score: 110 bits (276), Expect = 1.320e-24
Identity = 59/132 (44.70%), Postives = 78/132 (59.09%), Query Frame = 1
Query:  223 RGLMFPPVLTVTYAERRAELFGAE-ENYHLAPATFTVHYRTDSSDFWTTAITIFAVAQTAGLVVVVIRMLNWQGKAARTPQEYAFGLRTMTRALVFLAHSFAQATFWVLFLLTGYWFVFFKLQARVFALLQD 615
            R  +  PVLTV Y ERRA+   A+ +        F V Y  + S +WT A+ +FA+ QT  +   V+RM NW  ++ RT +E    L  + R LV+LAH +A A FWV  +L  YWF FFKLQARVFALL +
Sbjct:  174 RAKLLVPVLTVEYRERRADDVVADTDGLGRDEVEFRVLYEAEQSQYWTAAVVMFAIGQTLAVGFAVLRMFNWNRRSVRTTEEGGLSLIVLGRFLVYLAHGYAHAAFWVAVVLCAYWFAFFKLQARVFALLPE 305          
BLAST of mRNA_M-pyrifera_M_contig82985.19386.1 vs. uniprot
Match: A0A2R5GAI5_9STRA (Meckelin n=1 Tax=Hondaea fermentalgiana TaxID=2315210 RepID=A0A2R5GAI5_9STRA)

HSP 1 Score: 110 bits (275), Expect = 1.920e-24
Identity = 72/213 (33.80%), Postives = 108/213 (50.70%), Query Frame = 1
Query:    1 PVPVRVTNLLDADGNAPNENAQPEDESDDILTRRFFVFDAATGRSGSTGVAKDDVTVVRYASAITLTFPARPDDRGLMFPPVLTVTYAERRAELF----------GAEENYHLAPATFTVHYRTDSSDFWTTAITIFAVAQTAGLVVVVIRMLNWQGKAARTPQEYAFGLRTMTRALVFLAHSFAQATFWVLFLLTGYWFVFFKLQARVFALL 609
            PVPVR  NL+  +G  PNEN +  +E+DD+LTRRFF++D  +    S+  A D+ +V+RYA  ITLT   +      + PPVL + Y ER    F            EEN ++   +FTV Y      FW +    F +  T   +  ++R+ NW  + +R P +       + R + ++  +F+   FW LF    Y F+FFK+Q  V  LL
Sbjct:  554 PVPVRNRNLVQ-NGAFPNENTEIAEEADDVLTRRFFLYDQVS----SSVSASDEASVIRYAKTITLTTTVQELSSNKIEPPVLEILYEERLVADFYRDGVDEEGNPLEENTYV-DLSFTVAYTEKYDSFWQSTAAFFGITMTIVGLFGLLRLYNWTRRNSRLPGDSPVDFVFLLRCVSYMLSTFSTVFFWFLFAYAAYIFIFFKMQDSVHLLL 760          
BLAST of mRNA_M-pyrifera_M_contig82985.19386.1 vs. uniprot
Match: A0A078AY18_STYLE (Meckelin isoform 4 n=1 Tax=Stylonychia lemnae TaxID=5949 RepID=A0A078AY18_STYLE)

HSP 1 Score: 104 bits (259), Expect = 2.590e-22
Identity = 68/203 (33.50%), Postives = 101/203 (49.75%), Query Frame = 1
Query:    4 VPVRVTNLLDADGNAPNENAQPEDESDDILTRRFFVFDAATGRSGSTGVAKDDV-TVVRYASAITLTFPARPDDRGLMFPPVLTVTYAERRAELFGAEENYHLAPATFTVHYRTDSSDFWTTAITIFAVAQTAGLVVVVIRMLNWQGKAARTPQEYAFGLRTMTRALVFLAHSFAQATFWVLFLLTGYWFVFFKLQARVFALL 609
            VPV + N  DA G  PNE +    ++   L RRFF+FD  +G  G+ G  K  + TVVRY   +T+      D   ++F P+L +TY ER        E   LA   FT  Y  D ++FWTT   +         ++V+ +++ W      +    A     + + ++     ++Q  FW L ++TGYWFVFFKLQ RV+ LL
Sbjct:  424 VPVLIRNFQDAQGQKPNEESVLN-QNTWRLVRRFFMFDTISGIEGTDGYKKGQISTVVRYPKDLTMRIKLDLDSEEMIFTPLLIITYRERSRTRI---ETNSLATVKFTSEYAMDMTNFWTTIGGLLIGLLVFFGIIVITQLVIWYQLPTLSDDVNAKCKYAIVKFIITGLDVYSQLFFWFLVIVTGYWFVFFKLQERVYVLL 622          
BLAST of mRNA_M-pyrifera_M_contig82985.19386.1 vs. uniprot
Match: A0A8J8P7U9_HALGN (Uncharacterized protein n=1 Tax=Halteria grandinella TaxID=5974 RepID=A0A8J8P7U9_HALGN)

HSP 1 Score: 103 bits (256), Expect = 6.350e-22
Identity = 73/206 (35.44%), Postives = 108/206 (52.43%), Query Frame = 1
Query:    4 VPVRVTNLLDADGNAPNENAQPEDESDDILTRRFFVFDAATGRSGSTG-VAKDDV-TVVRYASAITLTFPARPDDRGLMFPPVLTVTYAERRAELFGAEENYHLAPATFTVHYRTDSSDFWTTAITIFAVAQTAGLVVVVIRMLNWQGKAARTPQEYAFGLRTMTRALVFLAHSFAQATFWVLFLLTGYWFVFFKLQARVFALLQD 615
            VPV V N+ D  GN PN +    D +   L RRFFVFD  +G  G T    K +V TV+RYA +ITL     PD+  +++ P+L + Y ER     G + N  LA  T++  Y  D++   +T   +   A     V+VV +++ W      +    A    T+ +  +   H+F+   FW L +L+GYWFVFFK+Q RV+ LL +
Sbjct:  444 VPVLVKNMQDKVGNRPNLD-DSTDGNGWRLVRRFFVFDTKSGVEGGTDKYVKGEVSTVIRYAKSITLRVKIDPDNEEMIYTPLLIINYRERSKT--GIQTN-PLAQVTYSTEYLQDNTKLISTLKGLLVGALILLGVLVVGQLIVWSFLPQLSDDVQARCQYTIVKFFITTIHTFSSLFFWFLVILSGYWFVFFKMQERVYLLLPE 645          
BLAST of mRNA_M-pyrifera_M_contig82985.19386.1 vs. uniprot
Match: J9GB90_9SPIT (Uncharacterized protein n=1 Tax=Oxytricha trifallax TaxID=1172189 RepID=J9GB90_9SPIT)

HSP 1 Score: 103 bits (256), Expect = 6.510e-22
Identity = 67/205 (32.68%), Postives = 103/205 (50.24%), Query Frame = 1
Query:    4 VPVRVTNLLDADGNAPNENAQPEDESDDILTRRFFVFDAATGRSGSTGVAKDDV-TVVRYASAITLTFPARPDDRGLMFPPVLTVTYAERRAELFGAEENYHLAPATFTVHYRTDSSDFWTTAITIFAVAQTAGLVVVVIRMLNWQGKAARTPQEYAFGLRTMTRALVFLAHSFAQATFWVLFLLTGYWFVFFKLQARVFALLQD 615
            VPV + N  D+ G+ PN+ +   D++   L RRFF+FD  +G  G+ G     + TVVRY   I L      ++  ++  P+L +TY ER     G   N  LA  +FT  Y  D+S+FW T   +F        ++V++++  WQ     +  + A     + +  +     F+   FW + L+ GYWFVFFKLQ RV+ LL  
Sbjct:  425 VPVLIRNFQDSQGSRPNDESVT-DQNKWRLVRRFFLFDTKSGIEGTDGYKNGQISTVVRYPQDIKLRIKLDINNDEMILNPLLIITYRERSRT--GVATN-SLASVSFTAEYAMDTSNFWKTVSGLFIGCMALFGIMVIVQVCIWQCNPTLSDDKSAKCKYAIVKIFLTGIDVFSNLIFWFMVLVAGYWFVFFKLQERVYVLLPQ 625          
BLAST of mRNA_M-pyrifera_M_contig82985.19386.1 vs. uniprot
Match: A0A1R2CXH2_9CILI (Uncharacterized protein n=1 Tax=Stentor coeruleus TaxID=5963 RepID=A0A1R2CXH2_9CILI)

HSP 1 Score: 94.7 bits (234), Expect = 5.570e-19
Identity = 66/206 (32.04%), Postives = 102/206 (49.51%), Query Frame = 1
Query:    4 VPVRVTNLLDADGNAPNENAQPEDESDDILTRRFFVFDAATGRSGSTG-VAKDDVTVVRYASAITLTFPARPDDRGLMFPPVLTVTYAERRAELF-GAEENYHLAPATFTVHYRTDSSDFWTTAITIFAVAQTAGLVVVVIRMLNWQGKAARTPQEYA---FGLRTMTRALVFLAHSFAQATFWVLFLLTGYWFVFFKLQARVFAL 606
            +PV V N  D+DGN+PNE++   DES   L RRFF++D  +G+ G+   V  D  TV++Y    TL      D    ++ P+L + Y  R        +   H+A   F   Y  + S FW  A  +F       L++ + R   W       P E+    +  R + +++ +LA S+A   FW L  +T YWF+F+K+Q  V+AL
Sbjct:  378 IPVLVKNYKDSDGNSPNESS---DESKWKLVRRFFIYDNVSGKEGTDAYVNGDKTTVLQYMRTATLRVKLINDQDQKIYVPLLILDYRARYTSYIESVDATDHIA---FNSQYTMNLSRFWYIARGVFIGINILVLIITISRTYIW---TKNNPSEHVRDTYTSRLIIQSIWYLAGSWAFIVFWYLIGITAYWFIFYKMQYHVYAL 574          
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig82985.19386.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A812Y231_9DINO3.310e-4042.79Tmem67 protein (Fragment) n=2 Tax=Sar TaxID=269873... [more]
A0A5A8C1T1_CAFRO3.950e-4042.79Uncharacterized protein n=2 Tax=Cafeteria roenberg... [more]
K3WK50_GLOUD6.960e-2936.59Uncharacterized protein n=1 Tax=Globisporangium ul... [more]
A0A5D6XN00_9STRA1.130e-2736.59Uncharacterized protein n=1 Tax=Pythium brassicum ... [more]
A0A5A8C0Z5_CAFRO1.320e-2444.70Uncharacterized protein n=1 Tax=Cafeteria roenberg... [more]
A0A2R5GAI5_9STRA1.920e-2433.80Meckelin n=1 Tax=Hondaea fermentalgiana TaxID=2315... [more]
A0A078AY18_STYLE2.590e-2233.50Meckelin isoform 4 n=1 Tax=Stylonychia lemnae TaxI... [more]
A0A8J8P7U9_HALGN6.350e-2235.44Uncharacterized protein n=1 Tax=Halteria grandinel... [more]
J9GB90_9SPIT6.510e-2232.68Uncharacterized protein n=1 Tax=Oxytricha trifalla... [more]
A0A1R2CXH2_9CILI5.570e-1932.04Uncharacterized protein n=1 Tax=Stentor coeruleus ... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig82985contigM-pyrifera_M_contig82985:278..892 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-19
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score120.6
Seed ortholog evalue8.8e-25
Seed eggNOG ortholog65071.PYU1_T005342
Preferred nameTMEM67
KEGG koko:K13525,ko:K19348
KEGG TC3.A.16.1
KEGG Pathwayko04141,ko05134,map04141,map05134
KEGG ModuleM00400,M00403
Hectar predicted targeting categoryother localisation
GOsGO:0001763,GO:0002009,GO:0003674,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005783,GO:0005789,GO:0005813,GO:0005815,GO:0005856,GO:0005886,GO:0005929,GO:0006508,GO:0006511,GO:0006807,GO:0006950,GO:0006996,GO:0007275,GO:0007368,GO:0007389,GO:0007399,GO:0007507,GO:0008092,GO:0008150,GO:0008152,GO:0009056,GO:0009057,GO:0009653,GO:0009799,GO:0009855,GO:0009888,GO:0009893,GO:0009894,GO:0009896,GO:0009987,GO:0010033,GO:0010243,GO:0010498,GO:0010564,GO:0010604,GO:0010638,GO:0010639,GO:0010824,GO:0010826,GO:0010948,GO:0012505,GO:0012506,GO:0015630,GO:0016020,GO:0016043,GO:0019222,GO:0019538,GO:0019941,GO:0022008,GO:0022406,GO:0022607,GO:0030030,GO:0030031,GO:0030154,GO:0030162,GO:0030163,GO:0030182,GO:0030433,GO:0030659,GO:0031005,GO:0031090,GO:0031253,GO:0031323,GO:0031325,GO:0031329,GO:0031331,GO:0031344,GO:0031346,GO:0031410,GO:0031982,GO:0031984,GO:0032268,GO:0032270,GO:0032501,GO:0032502,GO:0032886,GO:0032991,GO:0033043,GO:0033554,GO:0034976,GO:0035239,GO:0035295,GO:0035845,GO:0035869,GO:0036038,GO:0036503,GO:0042175,GO:0042176,GO:0042221,GO:0042461,GO:0042995,GO:0043161,GO:0043170,GO:0043226,GO:0043227,GO:0043228,GO:0043229,GO:0043231,GO:0043232,GO:0043632,GO:0044085,GO:0044087,GO:0044089,GO:0044237,GO:0044238,GO:0044248,GO:0044257,GO:0044260,GO:0044265,GO:0044267,GO:0044422,GO:0044424,GO:0044425,GO:0044430,GO:0044432,GO:0044433,GO:0044441,GO:0044444,GO:0044446,GO:0044459,GO:0044463,GO:0044464,GO:0044782,GO:0045724,GO:0045732,GO:0045786,GO:0045862,GO:0046530,GO:0046605,GO:0046606,GO:0048468,GO:0048513,GO:0048518,GO:0048519,GO:0048522,GO:0048523,GO:0048583,GO:0048584,GO:0048666,GO:0048699,GO:0048729,GO:0048731,GO:0048754,GO:0048856,GO:0048869,GO:0050789,GO:0050794,GO:0050896,GO:0051082,GO:0051128,GO:0051129,GO:0051130,GO:0051171,GO:0051173,GO:0051179,GO:0051246,GO:0051247,GO:0051493,GO:0051494,GO:0051603,GO:0051640,GO:0051641,GO:0051716,GO:0051726,GO:0051787,GO:0060170,GO:0060255,GO:0060271,GO:0060429,GO:0060491,GO:0060562,GO:0061136,GO:0061138,GO:0065007,GO:0070507,GO:0070925,GO:0071704,GO:0071840,GO:0071944,GO:0072359,GO:0080090,GO:0080134,GO:0080135,GO:0097708,GO:0097711,GO:0098588,GO:0098590,GO:0098827,GO:0120025,GO:0120031,GO:0120032,GO:0120034,GO:0120035,GO:0120036,GO:0120038,GO:0140056,GO:1901564,GO:1901565,GO:1901575,GO:1901698,GO:1901800,GO:1902017,GO:1902115,GO:1902117,GO:1902855,GO:1902857,GO:1903050,GO:1903052,GO:1903362,GO:1903364,GO:1904292,GO:1904294,GO:1905515,GO:1905897,GO:1905898
EggNOG free text desc.Transmembrane protein. Source PGD
EggNOG OGs1MB6G@121069,KOG4611@1,KOG4611@2759
COG Functional cat.S
Best tax levelPythiales
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko00002,ko03019,ko03036,ko04131,ko04147
Exons1
Model size615
Cds size615
Stop0
Start0
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622816736.672-CDS-M-pyrifera_M_contig82985:277..8921622816736.672-CDS-M-pyrifera_M_contig82985:277..892Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig82985 278..892 +
1692278148.3081295-CDS-M-pyrifera_M_contig82985:277..8921692278148.3081295-CDS-M-pyrifera_M_contig82985:277..892Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig82985 278..892 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig82985.19386.1prot_M-pyrifera_M_contig82985.19386.1Macrocystis pyrifera P11B4 malepolypeptideM-pyrifera_M_contig82985 278..892 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_M-pyrifera_M_contig82985.19386.1

>prot_M-pyrifera_M_contig82985.19386.1 ID=prot_M-pyrifera_M_contig82985.19386.1|Name=mRNA_M-pyrifera_M_contig82985.19386.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=205bp
PVPVRVTNLLDADGNAPNENAQPEDESDDILTRRFFVFDAATGRSGSTGV
AKDDVTVVRYASAITLTFPARPDDRGLMFPPVLTVTYAERRAELFGAEEN
YHLAPATFTVHYRTDSSDFWTTAITIFAVAQTAGLVVVVIRMLNWQGKAA
RTPQEYAFGLRTMTRALVFLAHSFAQATFWVLFLLTGYWFVFFKLQARVF
ALLQD
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mRNA from alignment at M-pyrifera_M_contig82985:278..892+

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_M-pyrifera_M_contig82985.19386.1 ID=mRNA_M-pyrifera_M_contig82985.19386.1|Name=mRNA_M-pyrifera_M_contig82985.19386.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=615bp|location=Sequence derived from alignment at M-pyrifera_M_contig82985:278..892+ (Macrocystis pyrifera P11B4 male)
CCAGTTCCCGTGCGTGTCACTAACCTCCTTGACGCCGACGGCAATGCTCC CAACGAGAACGCGCAGCCCGAGGATGAATCGGACGACATTCTCACCAGGC GGTTTTTCGTCTTCGACGCCGCGACTGGAAGGTCAGGATCCACTGGAGTG GCCAAGGATGACGTCACGGTGGTGCGTTATGCATCAGCCATCACGCTCAC GTTCCCGGCGAGACCGGATGACAGAGGGCTCATGTTCCCACCTGTGCTCA CGGTGACGTATGCAGAACGTCGAGCGGAACTTTTTGGAGCGGAAGAAAAC TACCACCTCGCACCAGCCACTTTCACAGTGCACTATCGCACCGATTCTTC CGATTTCTGGACCACGGCCATCACCATCTTCGCCGTCGCGCAGACGGCGG GGCTTGTCGTGGTGGTCATTCGCATGCTCAACTGGCAAGGCAAGGCTGCG AGGACACCACAAGAATACGCCTTTGGACTGCGCACCATGACGCGTGCCCT GGTTTTCCTGGCCCACTCTTTCGCGCAAGCCACCTTTTGGGTGCTCTTCC TCCTCACGGGCTACTGGTTCGTCTTCTTCAAGCTCCAGGCTCGGGTGTTC GCTCTCCTGCAAGAT
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Coding sequence (CDS) from alignment at M-pyrifera_M_contig82985:278..892+

>mRNA_M-pyrifera_M_contig82985.19386.1 ID=mRNA_M-pyrifera_M_contig82985.19386.1|Name=mRNA_M-pyrifera_M_contig82985.19386.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=1230bp|location=Sequence derived from alignment at M-pyrifera_M_contig82985:278..892+ (Macrocystis pyrifera P11B4 male)
CCAGTTCCCGTGCGTGTCACTAACCTCCTTGACGCCGACGGCAATGCTCC
CAACGAGAACGCGCAGCCCGAGGATGAATCGGACGACATTCTCACCAGGC
GGTTTTTCGTCTTCGACGCCGCGACTGGAAGGTCAGGATCCACTGGAGTG
GCCAAGGATGACGTCACGGTGGTGCGTTATGCATCAGCCATCACGCTCAC
GTTCCCGGCGAGACCGGATGACAGAGGGCTCATGTTCCCACCTGTGCTCA
CGGTGACGTATGCAGAACGTCGAGCGGAACTTTTTGGAGCGGAAGAAAAC
TACCACCTCGCACCAGCCACTTTCACAGTGCACTATCGCACCGATTCTTC
CGATTTCTGGACCACGGCCATCACCATCTTCGCCGTCGCGCAGACGGCGG
GGCTTGTCGTGGTGGTCATTCGCATGCTCAACTGGCAAGGCAAGGCTGCG
AGGACACCACAAGAATACGCCTTTGGACTGCGCACCATGACGCGTGCCCT
GGTTTTCCTGGCCCACTCTTTCGCGCAAGCCACCTTTTGGGTGCTCTTCC
TCCTCACGGGCTACTGGTTCGTCTTCTTCAAGCTCCAGGCTCGGGTGTTC
GCTCTCCTGCAAGATCCAGTTCCCGTGCGTGTCACTAACCTCCTTGACGC
CGACGGCAATGCTCCCAACGAGAACGCGCAGCCCGAGGATGAATCGGACG
ACATTCTCACCAGGCGGTTTTTCGTCTTCGACGCCGCGACTGGAAGGTCA
GGATCCACTGGAGTGGCCAAGGATGACGTCACGGTGGTGCGTTATGCATC
AGCCATCACGCTCACGTTCCCGGCGAGACCGGATGACAGAGGGCTCATGT
TCCCACCTGTGCTCACGGTGACGTATGCAGAACGTCGAGCGGAACTTTTT
GGAGCGGAAGAAAACTACCACCTCGCACCAGCCACTTTCACAGTGCACTA
TCGCACCGATTCTTCCGATTTCTGGACCACGGCCATCACCATCTTCGCCG
TCGCGCAGACGGCGGGGCTTGTCGTGGTGGTCATTCGCATGCTCAACTGG
CAAGGCAAGGCTGCGAGGACACCACAAGAATACGCCTTTGGACTGCGCAC
CATGACGCGTGCCCTGGTTTTCCTGGCCCACTCTTTCGCGCAAGCCACCT
TTTGGGTGCTCTTCCTCCTCACGGGCTACTGGTTCGTCTTCTTCAAGCTC
CAGGCTCGGGTGTTCGCTCTCCTGCAAGAT
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