mRNA_M-pyrifera_M_contig82938.19377.1 (mRNA) Macrocystis pyrifera P11B4 male
Overview
Homology
BLAST of mRNA_M-pyrifera_M_contig82938.19377.1 vs. uniprot
Match: UPI000854F5AC (LOW QUALITY PROTEIN: ubiquitin carboxyl-terminal hydrolase 4-like n=1 Tax=Nanorana parkeri TaxID=125878 RepID=UPI000854F5AC) HSP 1 Score: 197 bits (502), Expect = 3.930e-58 Identity = 101/184 (54.89%), Postives = 123/184 (66.85%), Query Frame = 1 Query: 43 GICGLHNLGNTCFMNSAVQCLRATWPLASYMLQGREKVDLNRSNPLGTGGVMAMEFAHLVRLALAPSCPGVLAPRGVRVAAARARSEFAGFAQQDAHELLSFVLDGLHEDLNRVTKKPATEAPEGRGRPDAEVAKEAWDTYLERNKSVIVDHFSGLLKSVLTCPSCGNVSKTFDPFNSLALPIP 594 G+CGL NLGNTCFMNSA+QCL T PL Y L K ++N+ NPLG G +AM +A L+R + +APR + R +F+G+ QQD+ ELL+F+LDGLHEDLNRV KKP E + GRPD+ VAKEAWD +L RN S+IVD F GL KS L CP C VS TFDPF L LP+P Sbjct: 19 GLCGLSNLGNTCFMNSALQCLSNTPPLTEYFLSDDYKEEINKENPLGMKGEIAMAYAELIRQIWSGE-HSYVAPRMFKTQVGRFAPQFSGYQQQDSQELLAFLLDGLHEDLNRVKKKPYLELKDADGRPDSVVAKEAWDNHLRRNYSIIVDIFHGLFKSTLVCPECAKVSVTFDPFCYLTLPLP 201
BLAST of mRNA_M-pyrifera_M_contig82938.19377.1 vs. uniprot
Match: A0A2G9RJ31_LITCT (Ubiquitinyl hydrolase 1 (Fragment) n=2 Tax=Lithobates catesbeianus TaxID=8400 RepID=A0A2G9RJ31_LITCT) HSP 1 Score: 198 bits (503), Expect = 6.910e-58 Identity = 101/184 (54.89%), Postives = 123/184 (66.85%), Query Frame = 1 Query: 43 GICGLHNLGNTCFMNSAVQCLRATWPLASYMLQGREKVDLNRSNPLGTGGVMAMEFAHLVRLALAPSCPGVLAPRGVRVAAARARSEFAGFAQQDAHELLSFVLDGLHEDLNRVTKKPATEAPEGRGRPDAEVAKEAWDTYLERNKSVIVDHFSGLLKSVLTCPSCGNVSKTFDPFNSLALPIP 594 G+CGL NLGNTCFMNSA+QCL T PL Y L K ++N+ NPLG G +AM +A L+R + +APR + R +F+G+ QQD+ ELL+F+LDGLHEDLNRV KKP E + GRPD+ VAKEAWD +L RN S+IVD F GL KS L CP C VS TFDPF L LP+P Sbjct: 100 GLCGLSNLGNTCFMNSALQCLSNTPPLTEYFLTDDYKEEINKENPLGMKGEIAMAYAELIRQIWSGE-HSYVAPRMFKTQVGRFAPQFSGYQQQDSQELLAFLLDGLHEDLNRVKKKPYLELKDADGRPDSVVAKEAWDNHLRRNNSIIVDIFHGLFKSTLVCPECAKVSVTFDPFCYLTLPLP 282
BLAST of mRNA_M-pyrifera_M_contig82938.19377.1 vs. uniprot
Match: A0A8C9GLB3_9PRIM (USP domain-containing protein n=1 Tax=Piliocolobus tephrosceles TaxID=591936 RepID=A0A8C9GLB3_9PRIM) HSP 1 Score: 193 bits (491), Expect = 3.000e-57 Identity = 101/186 (54.30%), Postives = 123/186 (66.13%), Query Frame = 1 Query: 43 GICGLHNLGNTCFMNSAVQCLRATWPLASYMLQGREKVDLNRSNPLGTGGVMAMEFAHLVRLALAPSCPGVLAPRGVRVAAARARSEFAGFAQQDAHELLSFVLDGLHEDLNRVTKKPATEAPEGRGRPDAEVAKEAWDTYLERNKSVIVDHFSGLLKSVLTCPSCGNVSKTFDPFNSLALPIPPK 600 G+CGL NLGNTCFMNSA+QCL T PL Y L+ + ++NR NPLG G +A +A L++ + V APR + R +F+G+ QQD+ ELL+F+LDGLHEDLNRV KKP E + GRPDA VAKEAW+ + RN SVIVD F GL KS L CP C VS TFDPF L LP+P K Sbjct: 35 GLCGLGNLGNTCFMNSALQCLSNTAPLTDYFLKDEYEAEINRDNPLGMKGEIAEAYAELIKQMWSGRDAHV-APRMFKTQVGRFAPQFSGYQQQDSQELLAFLLDGLHEDLNRVKKKPYLELKDANGRPDAVVAKEAWENHRLRNDSVIVDTFHGLFKSTLVCPECAKVSVTFDPFCYLTLPLPLK 219
BLAST of mRNA_M-pyrifera_M_contig82938.19377.1 vs. uniprot
Match: I0YQZ0_COCSC (Ubiquitin carboxyl-terminal hydrolase (Fragment) n=1 Tax=Coccomyxa subellipsoidea (strain C-169) TaxID=574566 RepID=I0YQZ0_COCSC) HSP 1 Score: 193 bits (491), Expect = 4.090e-57 Identity = 100/184 (54.35%), Postives = 121/184 (65.76%), Query Frame = 1 Query: 43 GICGLHNLGNTCFMNSAVQCLRATWPLASYMLQGREKVDLNRSNPLGTGGVMAMEFAHLVRLALAPSCPGVLAPRGVRVAAARARSEFAGFAQQDAHELLSFVLDGLHEDLNRVTKKPATEAPEGRGRPDAEVAKEAWDTYLERNKSVIVDHFSGLLKSVLTCPSCGNVSKTFDPFNSLALPIP 594 G+ GL NLGNTCFMNS+VQCL PL L G K DLN NPLG G +A F L++L L G ++P+G + A AR +F G++QQD+ ELL+F+LDGLHEDLNRV +KP E + GRPD VA EAWD Y +RN SV+VDHF GL KS L CP C S FDPF L+LP+P Sbjct: 1 GLAGLSNLGNTCFMNSSVQCLAHAAPLVRVFLTGAYKRDLNPDNPLGNKGELAEAFGSLMKL-LWQGGVGSVSPKGFKAALARFAPQFGGYSQQDSQELLAFLLDGLHEDLNRVRQKPYVEEADAEGRPDKVVAAEAWDNYRKRNDSVVVDHFQGLYKSTLVCPQCSFSSVKFDPFMYLSLPLP 183
BLAST of mRNA_M-pyrifera_M_contig82938.19377.1 vs. uniprot
Match: A0A2G9P1R3_LITCT (USP domain-containing protein (Fragment) n=2 Tax=Tetrapoda TaxID=32523 RepID=A0A2G9P1R3_LITCT) HSP 1 Score: 189 bits (480), Expect = 4.690e-57 Identity = 94/186 (50.54%), Postives = 121/186 (65.05%), Query Frame = 1 Query: 43 GICGLHNLGNTCFMNSAVQCLRATWPLASYMLQGREKVDLNRSNPLGTGGVMAMEFAHLVRLALAPSCPGVLAPRGVRVAAARARSEFAGFAQQDAHELLSFVLDGLHEDLNRVTKKPATEAPEGRGRPDAEVAKEAWDTYLERNKSVIVDHFSGLLKSVLTCPSCGNVSKTFDPFNSLALPIPPK 600 G+CGL NLGNTCFMNSA+QCL T PL Y L + + +LN NPLG G +A +A L++ + V PR + R +F+G+ QQD ELL+F+LDGLHEDLNR+ KKP + + GRPD VA+EAW+ +++RN S+IVD F GL KS L CP C +S TFDPF L LP+P K Sbjct: 44 GLCGLSNLGNTCFMNSAIQCLSNTPPLTEYFLNDKYQDELNLDNPLGMRGEIAKSYAELIKQMWSGKYSYVT-PRAFKTQVGRFAPQFSGYQQQDCQELLAFLLDGLHEDLNRIRKKPYIQLKDAEGRPDEVVAEEAWENHIKRNDSIIVDIFHGLFKSTLVCPECSKISVTFDPFCYLTLPLPMK 228
BLAST of mRNA_M-pyrifera_M_contig82938.19377.1 vs. uniprot
Match: A0A2Y9QTH3_TRIMA (Ubiquitinyl hydrolase 1 n=2 Tax=Eutheria TaxID=9347 RepID=A0A2Y9QTH3_TRIMA) HSP 1 Score: 195 bits (495), Expect = 2.230e-56 Identity = 102/186 (54.84%), Postives = 124/186 (66.67%), Query Frame = 1 Query: 43 GICGLHNLGNTCFMNSAVQCLRATWPLASYMLQGREKVDLNRSNPLGTGGVMAMEFAHLVRLALAPSCPGVLAPRGVRVAAARARSEFAGFAQQDAHELLSFVLDGLHEDLNRVTKKPATEAPEGRGRPDAEVAKEAWDTYLERNKSVIVDHFSGLLKSVLTCPSCGNVSKTFDPFNSLALPIPPK 600 G+CGL NLGNTCFMNSA+QCL T PL Y L+ +V++NR NPLG G +A +A L++ + V APR + R +F+G+ QQD+ ELL+F+LDGLHEDLNRV KKP E + GRPDA VAKEAW+ + RN SVIVD F GL KS L CP C VS TFDPF L LP+P K Sbjct: 300 GLCGLGNLGNTCFMNSALQCLSNTAPLTDYFLKDEYEVEINRDNPLGMKGEIAEAYAELIKQMWSGRDTHV-APRMFKTQVGRFAPQFSGYQQQDSQELLAFLLDGLHEDLNRVKKKPYLELKDANGRPDAVVAKEAWENHRLRNDSVIVDTFHGLFKSTLVCPECAKVSVTFDPFCYLTLPLPLK 484
BLAST of mRNA_M-pyrifera_M_contig82938.19377.1 vs. uniprot
Match: A0A8J0V3P2_XENLA (Ubiquitinyl hydrolase 1 n=1 Tax=Xenopus laevis TaxID=8355 RepID=A0A8J0V3P2_XENLA) HSP 1 Score: 196 bits (498), Expect = 3.140e-56 Identity = 101/186 (54.30%), Postives = 123/186 (66.13%), Query Frame = 1 Query: 43 GICGLHNLGNTCFMNSAVQCLRATWPLASYMLQGREKVDLNRSNPLGTGGVMAMEFAHLVRLALAPSCPGVLAPRGVRVAAARARSEFAGFAQQDAHELLSFVLDGLHEDLNRVTKKPATEAPEGRGRPDAEVAKEAWDTYLERNKSVIVDHFSGLLKSVLTCPSCGNVSKTFDPFNSLALPIPPK 600 G+CGL NLGNTCFMNSA+QCL T PL Y L K ++NR NPLG G +A+ +A L+R + +APR + R +F+G+ QQD+ ELL+F+LDGLHEDLNRV KKP E + GRPD+ VA EAWD +L RN S+IVD F GL KS L CP C VS TFDPF L LP+P K Sbjct: 319 GLCGLSNLGNTCFMNSALQCLSNTPPLTRYFLMDEYKKEINRENPLGMKGEIAVAYAELIRQIWSGE-HSYMAPRMFKTQVGRFAPQFSGYQQQDSQELLAFLLDGLHEDLNRVKKKPYLELKDANGRPDSIVATEAWDNHLRRNYSIIVDIFHGLFKSTLVCPECHKVSVTFDPFCYLTLPLPMK 503
BLAST of mRNA_M-pyrifera_M_contig82938.19377.1 vs. uniprot
Match: A0A224ZBD9_9ACAR (Ubiquitinyl hydrolase 1 n=1 Tax=Rhipicephalus zambeziensis TaxID=60191 RepID=A0A224ZBD9_9ACAR) HSP 1 Score: 196 bits (498), Expect = 3.910e-56 Identity = 99/186 (53.23%), Postives = 126/186 (67.74%), Query Frame = 1 Query: 43 GICGLHNLGNTCFMNSAVQCLRATWPLASYMLQGREKVDLNRSNPLGTGGVMAMEFAHLVRLALAPSCPGVLAPRGVRVAAARARSEFAGFAQQDAHELLSFVLDGLHEDLNRVTKKPATEAPEGRGRPDAEVAKEAWDTYLERNKSVIVDHFSGLLKSVLTCPSCGNVSKTFDPFNSLALPIPPK 600 G+CGL N+GNTCFMNSA+QC+ T PL Y + R +LN SNPLG G +A +A L+++ + +C V+ PR ++A R +F+GF QQD EL++F+LDGLHEDLNRV KP E + GRPD VA+EAW YL RN S+IVD F GLLKS L CP C +S TFDPF L+LP+P K Sbjct: 282 GLCGLGNIGNTCFMNSALQCMSNTPPLTEYFMTDRYLSELNDSNPLGMRGEIAKSYADLIKVMWSGNCSSVI-PRPFKMAVGRFAPQFSGFQQQDCQELMAFLLDGLHEDLNRVINKPYIELKDSDGRPDEVVAQEAWHNYLLRNNSIIVDIFHGLLKSTLVCPDCHKLSVTFDPFCYLSLPLPYK 466
BLAST of mRNA_M-pyrifera_M_contig82938.19377.1 vs. uniprot
Match: A0A2F0AUB7_ESCRO (Ubiquitin carboxyl-terminal hydrolase 15 (Fragment) n=1 Tax=Eschrichtius robustus TaxID=9764 RepID=A0A2F0AUB7_ESCRO) HSP 1 Score: 189 bits (480), Expect = 4.900e-56 Identity = 95/186 (51.08%), Postives = 121/186 (65.05%), Query Frame = 1 Query: 43 GICGLHNLGNTCFMNSAVQCLRATWPLASYMLQGREKVDLNRSNPLGTGGVMAMEFAHLVRLALAPSCPGVLAPRGVRVAAARARSEFAGFAQQDAHELLSFVLDGLHEDLNRVTKKPATEAPEGRGRPDAEVAKEAWDTYLERNKSVIVDHFSGLLKSVLTCPSCGNVSKTFDPFNSLALPIPPK 600 G+CGL NLGNTCFMNSA+QCL T PL Y L + + +LN NPLG G +A +A L++ + V PR + R +F+G+ QQD ELL+F+LDGLHEDLNR+ KKP + + GRPD VA+EAW+ +L+RN S+IVD F GL KS L CP C +S TFDPF L LP+P K Sbjct: 30 GLCGLSNLGNTCFMNSAIQCLSNTPPLTEYFLNDKYQEELNFDNPLGMRGEIAKSYAELIKQMWSGKFSYVT-PRAFKTQVGRFAPQFSGYQQQDCQELLAFLLDGLHEDLNRIRKKPYIQLKDADGRPDKVVAEEAWENHLKRNDSIIVDIFHGLFKSTLVCPECAKISVTFDPFCYLTLPLPMK 214
BLAST of mRNA_M-pyrifera_M_contig82938.19377.1 vs. uniprot
Match: A0A2L2XYN7_PARTP (Ubiquitin carboxyl-terminal hydrolase n=1 Tax=Parasteatoda tepidariorum TaxID=114398 RepID=A0A2L2XYN7_PARTP) HSP 1 Score: 199 bits (507), Expect = 6.880e-56 Identity = 101/188 (53.72%), Postives = 126/188 (67.02%), Query Frame = 1 Query: 37 RGGICGLHNLGNTCFMNSAVQCLRATWPLASYMLQGREKVDLNRSNPLGTGGVMAMEFAHLVRLALAPSCPGVLAPRGVRVAAARARSEFAGFAQQDAHELLSFVLDGLHEDLNRVTKKPATEAPEGRGRPDAEVAKEAWDTYLERNKSVIVDHFSGLLKSVLTCPSCGNVSKTFDPFNSLALPIPPK 600 + G+CGL NLGNTCFMNSA+QC+ T PLA Y LQ +LN NPLG G +A F L++ + +C + PR ++ R +F+G+ QQD EL++F+LDGLHEDLNRV KKP E + GRPD VAKEAW+ YL+RN S+IVD F GLLKS L CP C VS TFDPF L+LP+P K Sbjct: 285 QAGLCGLSNLGNTCFMNSALQCMSNTPPLADYFLQDHYWNELNNDNPLGMQGEIAKSFGDLIKNMWSGNCSYTV-PRNFKMIVGRFAPQFSGYQQQDCQELMAFLLDGLHEDLNRVKKKPYIELSDADGRPDELVAKEAWENYLKRNNSIIVDTFHGLLKSTLVCPECNKVSVTFDPFCYLSLPLPLK 471 The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig82938.19377.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_M-pyrifera_M_contig82938.19377.1 >prot_M-pyrifera_M_contig82938.19377.1 ID=prot_M-pyrifera_M_contig82938.19377.1|Name=mRNA_M-pyrifera_M_contig82938.19377.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=200bp GYPWDLGVDAFGRGGICGLHNLGNTCFMNSAVQCLRATWPLASYMLQGREback to top mRNA from alignment at M-pyrifera_M_contig82938:303..902+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_M-pyrifera_M_contig82938.19377.1 ID=mRNA_M-pyrifera_M_contig82938.19377.1|Name=mRNA_M-pyrifera_M_contig82938.19377.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=600bp|location=Sequence derived from alignment at M-pyrifera_M_contig82938:303..902+ (Macrocystis pyrifera P11B4 male)back to top Coding sequence (CDS) from alignment at M-pyrifera_M_contig82938:303..902+ >mRNA_M-pyrifera_M_contig82938.19377.1 ID=mRNA_M-pyrifera_M_contig82938.19377.1|Name=mRNA_M-pyrifera_M_contig82938.19377.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=1200bp|location=Sequence derived from alignment at M-pyrifera_M_contig82938:303..902+ (Macrocystis pyrifera P11B4 male)back to top |