mRNA_M-pyrifera_M_contig82920.19372.1 (mRNA) Macrocystis pyrifera P11B4 male
Overview
Homology
BLAST of mRNA_M-pyrifera_M_contig82920.19372.1 vs. uniprot
Match: A0A8H7ACL3_9EURO (MMS19 nucleotide excision repair protein n=1 Tax=Endocarpon pusillum TaxID=364733 RepID=A0A8H7ACL3_9EURO) HSP 1 Score: 68.2 bits (165), Expect = 2.660e-10 Identity = 53/140 (37.86%), Postives = 83/140 (59.29%), Query Frame = 1 Query: 79 PHQESAARALGEVLAPGGGCLAGAGAKVRRLYRQRYFCTTKALLLARF-SAPQAEERQRSGVLAALAQLLLHVPHDLLLMELPDLLPLLLQALDGGQSRAVVAASLGCLALLARSAPSTMAD--HLPTLVRGLLRLSTFP 489 P + AA + G +LAP GA+VR L Q+ F T L+ A F S+ Q EE++ L AL+ ++ +P D+++ ELP LLPLLLQ+LD R +A +L LA++ +PS + + H+P+LVR L++ ++ P Sbjct: 835 PVNKFAASSFGGLLAPDAVLSKTNGAQVRLLTPQKVFQTLAPLISAGFKSSSQGEEKE--NYLTALSGVIASIPSDIVVPELPTLLPLLLQSLDLSDQRVKIA-TLETLAVVTARSPSALEESGHIPSLVRRLVKTASIP 971
BLAST of mRNA_M-pyrifera_M_contig82920.19372.1 vs. uniprot
Match: U1GA82_ENDPU (MMS19 nucleotide excision repair protein n=1 Tax=Endocarpon pusillum (strain Z07020 / HMAS-L-300199) TaxID=1263415 RepID=U1GA82_ENDPU) HSP 1 Score: 67.4 bits (163), Expect = 4.730e-10 Identity = 56/160 (35.00%), Postives = 92/160 (57.50%), Query Frame = 1 Query: 34 EARALITFLVDLLAS-----PHQESAARALGEVLAPGGGCLAGAGAKVRRLYRQRYFCTTKALLLARF-SAPQAEERQRSGVLAALAQLLLHVPHDLLLMELPDLLPLLLQALDGGQSRAVVAASLGCLALLARSAPSTMAD--HLPTLVRGLLRLSTFP 489 + A++ L+ LL S P + AA + G +LAP GA++R L Q+ F T L+ A F S+ Q +E++ L AL+ ++ +P D+++ ELP LLPLLLQ+LD R +A +L LA++ +PS + + H+P+LVR L++ ++ P Sbjct: 534 DTNAILRDLLSLLDSSKHPLPVNKFAASSFGGLLAPDAVLSKTNGAQIRLLAPQKVFQTLAPLISAGFKSSSQGDEKE--NYLTALSGVIASIPSDIVVPELPTLLPLLLQSLDLSDQRVKIA-TLETLAVVTARSPSALEESGHIPSLVRRLVKTASIP 690
BLAST of mRNA_M-pyrifera_M_contig82920.19372.1 vs. uniprot
Match: W9Y646_9EURO (MMS19 nucleotide excision repair protein n=1 Tax=Capronia epimyces CBS 606.96 TaxID=1182542 RepID=W9Y646_9EURO) HSP 1 Score: 65.1 bits (157), Expect = 3.110e-9 Identity = 56/154 (36.36%), Postives = 86/154 (55.84%), Query Frame = 1 Query: 49 ITFLVDLLAS---PHQESAARALG--EVLAPGGGCLAGAGAKVRRLYRQRYFCTTKALLLARFSAPQAEERQRSGVLAALAQLLLHVPHDLLLMELPDLLPLLLQALDGGQSRAVVAASLGCLALLARSAPSTMAD--HLPTLVRGLLRLSTFP 489 +T LVDLL P + S A+G +L+P A++R L QR F L+ RF A Q+ ++ L AL+ +L VP D+++ ELP LLPLLLQ+LD + V A+L LA++ + PS + + H+P LV+ L++++T P Sbjct: 806 LTSLVDLLDENQHPREVSRKAAMGFATILSPDDVLSKKNAAEIRLLAPQRVFQILTPLISERFKASQSPS-EKENYLIALSGILASVPSDIVMPELPTLLPLLLQSLDI-TDQTVKVATLETLAVVISNNPSALEESGHIPALVKRLIKVATVP 957
BLAST of mRNA_M-pyrifera_M_contig82920.19372.1 vs. uniprot
Match: A0A0D1YRB6_9EURO (MMS19 nucleotide excision repair protein n=3 Tax=Exophiala sideris TaxID=1016849 RepID=A0A0D1YRB6_9EURO) HSP 1 Score: 64.7 bits (156), Expect = 4.230e-9 Identity = 57/154 (37.01%), Postives = 85/154 (55.19%), Query Frame = 1 Query: 49 ITFLVDLLAS---PHQESAARALG--EVLAPGGGCLAGAGAKVRRLYRQRYFCTTKALLLARFSAPQAEERQRSGVLAALAQLLLHVPHDLLLMELPDLLPLLLQALDGGQSRAVVAASLGCLALLARSAPSTMAD--HLPTLVRGLLRLSTFP 489 +T LVDLL P S A+G +LAP A++R L QR F L+ RF A Q ++ L +L+ +L HVP D+++ ELP LLPLLLQ+LD +AV A+L LA++ + P+ + D H+P LV+ L+ +++ P Sbjct: 803 LTSLVDLLDENRYPRDVSRRAAMGFATLLAPDDVLSKQNAAQIRLLAPQRVFQVLTPLISERFRASQ-NPSEKEHYLISLSGVLAHVPSDIVMPELPTLLPLLLQSLDVAD-QAVKVATLETLAVVISNNPTALEDSGHIPALVKRLVAVASVP 954
BLAST of mRNA_M-pyrifera_M_contig82920.19372.1 vs. uniprot
Match: A0A0D2X5I0_CAPO3 (MMS19 nucleotide excision repair protein n=1 Tax=Capsaspora owczarzaki (strain ATCC 30864) TaxID=595528 RepID=A0A0D2X5I0_CAPO3) HSP 1 Score: 63.9 bits (154), Expect = 7.820e-9 Identity = 42/112 (37.50%), Postives = 66/112 (58.93%), Query Frame = 1 Query: 154 AKVRRLYRQRYFCTTKALLLARFSAPQAEERQRSGVLAALAQLLLHVPHDLLLMELPDLLPLLLQALDGGQSRAVVAASLGCLALLARSAPSTMADHLPTLVRGLLRLSTFP 489 A R +Y+QR F + AL++ ++A E +Q L AL+ +L +VP +LL ELP LLPLL Q+L + +++ + LL AP+ +A H PTL++ ++ LST P Sbjct: 879 ANFRIMYKQRLFTSKSALIVQGYAATDDEHKQ--FYLTALSHMLQNVPKQVLLTELPSLLPLLFQSLSHANV-GLRLSTINSVYLLLFDAPALLASHTPTLIKHMMALSTSP 987
BLAST of mRNA_M-pyrifera_M_contig82920.19372.1 vs. uniprot
Match: A0A8J8VYZ6_9EURO (MMS19 nucleotide excision repair protein n=1 Tax=Penicillium sp. RFL-2021a TaxID=2839758 RepID=A0A8J8VYZ6_9EURO) HSP 1 Score: 61.6 bits (148), Expect = 4.930e-8 Identity = 59/160 (36.88%), Postives = 82/160 (51.25%), Query Frame = 1 Query: 46 LITFLVDLLASPHQE---SAARALGEVLAPGGGCLAGAGAKVRRLYRQRYFCTTKALLLARF---------SAPQAEERQRSGVLAALAQLLLHVPHDLLLMELPDLLPLLLQALD--GGQSRAVVAASLGCLALLARSAPSTMAD---HLPTLVRGLLR 474 ++T L+ LL+SP + S AR +L A GA +R L +QR F T ++ AR P + + LAALA +L +P DL+L ELP LLPLLLQ+LD +S AV +A+L LA++ R D H+ +LV LLR Sbjct: 804 VLTSLLRLLSSPDVQTSVSTARGFSILLGEDDVLSAANGASIRLLSKQRVFTTVVPIIAARIREVNVAGSEGLPTTADHIKPAHLAALAGILSTIPTDLVLTELPTLLPLLLQSLDLQNSESVAVRSATLDTLAVIIRDNGVAAIDKCGHVHSLVTRLLR 963
BLAST of mRNA_M-pyrifera_M_contig82920.19372.1 vs. uniprot
Match: A0A0D2CIC3_9EURO (MMS19 nucleotide excision repair protein n=2 Tax=Phialophora americana TaxID=5601 RepID=A0A0D2CIC3_9EURO) HSP 1 Score: 61.6 bits (148), Expect = 4.930e-8 Identity = 55/150 (36.67%), Postives = 82/150 (54.67%), Query Frame = 1 Query: 58 LVDLLASPHQ------ESAARALGEVLAPGGGCLAGAGAKVRRLYRQRYFCTTKALLLARFSAPQAEERQRSGVLAALAQLLLHVPHDLLLMELPDLLPLLLQALDGGQSRAVVAASLGCLALLARSAPSTMAD--HLPTLVRGLLRLST 483 LV+LL SP Q + AA +L+P GA++R L QR F T L+ +F A ++ L AL+ +L VP ++++ ELP LLPLLLQ+LD + V A+L LA++ S PS + D H+P LV+ L+ ++T Sbjct: 813 LVELL-SPSQYPRSVSQKAALGFATILSPDDILSKENGAQIRLLVPQRVFQTLTPLIAEKFRTSNAP-LEKENYLIALSGILASVPSEIVMPELPTLLPLLLQSLDI-TDQTVKVATLETLAVVISSNPSALVDSGHIPALVKRLITVAT 959
BLAST of mRNA_M-pyrifera_M_contig82920.19372.1 vs. uniprot
Match: A0A0D1ZBW8_EXOME (MMS19 nucleotide excision repair protein n=2 Tax=Exophiala mesophila TaxID=212818 RepID=A0A0D1ZBW8_EXOME) HSP 1 Score: 61.2 bits (147), Expect = 6.700e-8 Identity = 59/152 (38.82%), Postives = 84/152 (55.26%), Query Frame = 1 Query: 58 LVDLLAS---PHQESAARALG--EVLAPGGGCLAGAGAKVRRLYRQRYFCTTKALLLARF-SAPQAEERQRSGVLAALAQLLLHVPHDLLLMELPDLLPLLLQALDGGQSRAVVAASLGCLALLARSAPSTMAD--HLPTLVRGLLRLSTFP 489 LVDLL P S A+G +LAP A++R L QR F T L+ RF S+ A E++ L AL+ +L +VP D+++ ELP LLPLLLQ+LD + V A+L LA++ S P + + H+P LV+ LL ++T P Sbjct: 811 LVDLLDQSTYPVDVSKKAAMGFVSILAPDDVLSKTNDAQIRLLAPQRVFQTLTPLIAERFRSSSSAAEKE--NYLVALSGILTNVPSDIVMPELPTLLPLLLQSLDI-TDQMVKIATLETLAVVISSNPKALEESGHIPALVKRLLAVATVP 959
BLAST of mRNA_M-pyrifera_M_contig82920.19372.1 vs. uniprot
Match: W9X205_9EURO (MMS19 nucleotide excision repair protein n=2 Tax=Cladophialophora TaxID=82105 RepID=W9X205_9EURO) HSP 1 Score: 61.2 bits (147), Expect = 6.700e-8 Identity = 54/152 (35.53%), Postives = 87/152 (57.24%), Query Frame = 1 Query: 49 ITFLVDLLAS---PHQES--AARALGEVLAPGGGCLAGAGAKVRRLYRQRYFCTTKALLLARFSAPQAEERQRSGVLAALAQLLLHVPHDLLLMELPDLLPLLLQALDGGQSRAVVAASLGCLALLARSAPSTMAD--HLPTLVRGLLRLST 483 +T LV+LL S P+Q S AAR +LA GA++R L QR F T ++ +F Q+ ++ L A++ ++ VP ++++ ELP LLPLLLQ+LD + V A+LG LA++ + PS + + H+P LV+ L+ ++T Sbjct: 810 LTNLVELLDSRQYPYQVSQRAARGFATILASDDILSKENGAQIRLLAPQRVFQTLTPMISDKFKTSQSPF-EKENFLVAMSGIMGSVPSEIVMPELPTLLPLLLQSLDIAD-QTVKLATLGTLAVVISNNPSALEESGHIPALVKRLIAVAT 959
BLAST of mRNA_M-pyrifera_M_contig82920.19372.1 vs. uniprot
Match: UPI000A2A5EC9 (MMS19 nucleotide excision repair protein homolog n=1 Tax=Exaiptasia diaphana TaxID=2652724 RepID=UPI000A2A5EC9) HSP 1 Score: 60.8 bits (146), Expect = 9.080e-8 Identity = 44/112 (39.29%), Postives = 66/112 (58.93%), Query Frame = 1 Query: 154 AKVRRLYRQRYFCTTKALLLARF-SAPQAEERQRSGVLAALAQLLLHVPHDLLLMELPDLLPLLLQALDGGQSRAVVAASLGCLALLARSAPSTMADHLPTLVRGLLRLSTF 486 A +R +YRQR+F T LLLA F SAP + L AL+ LL +P +L+ E+P+L+PLL+Q+L Q+ +++ +SL L L AP + + ++V LLRL F Sbjct: 850 ANIRIMYRQRFFMETLPLLLAGFQSAPTVHKH---NYLTALSHLLRWIPKQVLMSEIPNLMPLLIQSLSHDQA-SLLLSSLQTLYSLVFDAPEAVTRQITSIVPNLLRLVKF 957 The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig82920.19372.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_M-pyrifera_M_contig82920.19372.1 >prot_M-pyrifera_M_contig82920.19372.1 ID=prot_M-pyrifera_M_contig82920.19372.1|Name=mRNA_M-pyrifera_M_contig82920.19372.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=163bp LAQALSAAGRAEARALITFLVDLLASPHQESAARALGEVLAPGGGCLAGAback to top mRNA from alignment at M-pyrifera_M_contig82920:164..652- Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_M-pyrifera_M_contig82920.19372.1 ID=mRNA_M-pyrifera_M_contig82920.19372.1|Name=mRNA_M-pyrifera_M_contig82920.19372.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=489bp|location=Sequence derived from alignment at M-pyrifera_M_contig82920:164..652- (Macrocystis pyrifera P11B4 male)back to top Coding sequence (CDS) from alignment at M-pyrifera_M_contig82920:164..652- >mRNA_M-pyrifera_M_contig82920.19372.1 ID=mRNA_M-pyrifera_M_contig82920.19372.1|Name=mRNA_M-pyrifera_M_contig82920.19372.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=978bp|location=Sequence derived from alignment at M-pyrifera_M_contig82920:164..652- (Macrocystis pyrifera P11B4 male)back to top |