mRNA_M-pyrifera_M_contig82919.19371.1 (mRNA) Macrocystis pyrifera P11B4 male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_M-pyrifera_M_contig82919.19371.1
Unique NamemRNA_M-pyrifera_M_contig82919.19371.1
TypemRNA
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Homology
BLAST of mRNA_M-pyrifera_M_contig82919.19371.1 vs. uniprot
Match: B7QL12_IXOSC (Glycyl-tRNA synthetase, putative n=2 Tax=Ixodes TaxID=6944 RepID=B7QL12_IXOSC)

HSP 1 Score: 216 bits (549), Expect = 2.740e-64
Identity = 126/291 (43.30%), Postives = 181/291 (62.20%), Query Frame = 1
Query:    1 MAHYSKECWDAEIYSDRYGWIECVGISDRACYDLSAHAKHTSHGHGLRAFRLFPDGPRQVREVVVQPRQPSFGKHFRKLAKPLQEALKALPQEDATAVEAAM-EKGEQSVEVSTPDGNSQSVPTELLSCTKRDATVAGVAEFPHVLEPSFGLGRILYCLLEQSFYLREGDEDRGVLAIPATLAPLTCSLLPLSNDGKLKEMVRGISAELSRNTVRHVVDDSSSSIGKRYARSDELGIPFAVTVDFESAGAVDSDAADSSLAQATVTIRERDSMDQKRC---SVAALAQELL 861
            MAHY+ +CWDAE  +  YGW+ECVG +DR+CYDL+ H K T +   +R F L P   + V  V     +P+ GK F+K AK + EAL+AL  E    +E  +  +G+  V V     N+  V +++++  +   TV      P V+EPSFG+GRI+Y + E SF +R+GDE R  L++P  +APL CS+LPLSN+ +  + V+ IS+ L+++ V H VDDSS SIG+RYAR+DE+ +PF +TVDF           D+    AT T+RERDSM+Q RC    +A L Q+L+
Sbjct:   90 MAHYACDCWDAECKTS-YGWVECVGCADRSCYDLTQHTKATGNCGIVRQF-LDPVDHKTVDVVEAVASKPALGKQFKKEAKAVAEALEALTLEQLDELEKQLASQGKAEVLVGQ---NTVEVTSDMVTVKRYQKTVHVDELVPGVIEPSFGIGRIMYAVFEHSFRVRDGDEQRTYLSLPPAVAPLKCSVLPLSNNPEFAKFVQRISSALTQHDVPHKVDDSSGSIGRRYARTDEVAVPFGITVDF-----------DTLKEPATATLRERDSMEQVRCPLEDLAPLVQDLV 364          
BLAST of mRNA_M-pyrifera_M_contig82919.19371.1 vs. uniprot
Match: A0A023FZA3_AMBPA (Putative glycyl-trna synthetase (Fragment) n=3 Tax=Ixodidae TaxID=6939 RepID=A0A023FZA3_AMBPA)

HSP 1 Score: 214 bits (545), Expect = 6.680e-64
Identity = 128/292 (43.84%), Postives = 179/292 (61.30%), Query Frame = 1
Query:    1 MAHYSKECWDAEIYSDRYGWIECVGISDRACYDLSAHAKHTSHGHGLRAFRLFPDGPRQVREVVVQPRQPSFGKHFRKLAKPLQEALKALPQEDATAVEAAM-EKGEQSVEVSTPDGNSQSVPTELLSCTKRDATVAGVAEF-PHVLEPSFGLGRILYCLLEQSFYLREGDEDRGVLAIPATLAPLTCSLLPLSNDGKLKEMVRGISAELSRNTVRHVVDDSSSSIGKRYARSDELGIPFAVTVDFESAGAVDSDAADSSLAQATVTIRERDSMDQKRC---SVAALAQELL 861
            MAHY+ +CWDAE  +  YGW+ECVG +DR+C+DLS H K T  G  L A +  P  P+ V  V   P + + GK F+K AKP+ +AL AL  E    +E  + E+G+  + V    G+S+   T+ +   KR      V E  P V+EPSFG+GRI+Y + E SF +REGDE R   ++PA +APL CS+LPLSN+    + V+ IS+ L+++ V H +DDSS SIG+RYAR+DE+ +P+ +TVDF           D+     T T+RERDSM Q RC    +A L Q+L+
Sbjct:   74 MAHYACDCWDAECKTS-YGWVECVGCADRSCFDLSQHTKAT--GVRLVAEKPLPQ-PKTVDVVEAVPNKAALGKQFKKEAKPVSDALAALSHEKVDLLEKEINERGDSELSV----GDSKVTITKDMVQVKRYQKTVHVDELVPGVIEPSFGIGRIMYAVFEHSFRVREGDEQRTYFSLPAAVAPLKCSVLPLSNNPDFNKFVQQISSALTQHDVAHKIDDSSGSIGRRYARTDEVAVPYGITVDF-----------DTLREPHTATLRERDSMLQVRCPLEDLAPLVQDLV 346          
BLAST of mRNA_M-pyrifera_M_contig82919.19371.1 vs. uniprot
Match: A0A8J4PZ30_9MYCE (Glycine--tRNA ligase n=1 Tax=Polysphondylium violaceum TaxID=133409 RepID=A0A8J4PZ30_9MYCE)

HSP 1 Score: 222 bits (565), Expect = 9.250e-64
Identity = 121/286 (42.31%), Postives = 175/286 (61.19%), Query Frame = 1
Query:    1 MAHYSKECWDAEIYSDRYGWIECVGISDRACYDLSAHAKHTSHGHGLRAFRLFPDGPRQVREVVVQPRQPSFGKHFRKLAKPLQEALKALPQEDATAVEAAMEKGEQSVEVSTPDGNSQSVPTELLSCTKRDATVAGVAEFPHVLEPSFGLGRILYCLLEQSFYLREGDEDRGVLAIPATLAPLTCSLLPLSNDGKLKEMVRGISAELSRNTVRHVVDDSSSSIGKRYARSDELGIPFAVTVDFESAGAVDSDAADSSLAQATVTIRERDSMDQKRCSVAALAQEL 858
            MAHY+ +CWDAEI++  YGW+ECVG +DR+CYDL+ H+K +  G  L  F  F +GP+ V  + V   +   GK F+K AK   + L AL  +   A+    +  E+ V   T DG + +V  E+++ TK    VAGV   PHV+EPSFGLGRI+Y +LE ++++R GDE RGVL++   +AP+ CS+LPL+   KL   V  I   L    + + VDD+ ++IG++YAR+DE+GIPF +T+DF +                TVT+RERD+  Q R  +A LA+ L
Sbjct:  405 MAHYASDCWDAEIHTS-YGWVECVGHADRSCYDLTVHSKCS--GTSLTVFEEFKEGPKMVDSIDVNMNKGLMGKTFKKEAKAPMDYLAALADKVDEALAIQQQLTEKGVYTLTIDGVAFNVTKEMVTLTKTQKKVAGVTYSPHVIEPSFGLGRIIYAILEHAYWVRGGDEQRGVLSLAPIIAPVKCSVLPLTTSEKLAPFVSKIIKILKEAGISNKVDDTGNAIGRKYARTDEIGIPFGITIDFTTPE------------DQTVTLRERDTTKQVRIPIADLAETL 675          
BLAST of mRNA_M-pyrifera_M_contig82919.19371.1 vs. uniprot
Match: A0A224YZM8_9ACAR (Glycine--tRNA ligase n=1 Tax=Rhipicephalus zambeziensis TaxID=60191 RepID=A0A224YZM8_9ACAR)

HSP 1 Score: 216 bits (551), Expect = 4.430e-63
Identity = 130/285 (45.61%), Postives = 175/285 (61.40%), Query Frame = 1
Query:    1 MAHYSKECWDAEIYSDRYGWIECVGISDRACYDLSAHAKHTSHGHGLRAFRLFPDGPRQVREVVVQPRQPSFGKHFRKLAKPLQEALKALPQEDATAVEAAM-EKGEQSVEVSTPDGNSQSVPTELLSCTKRDATVAGVAEF-PHVLEPSFGLGRILYCLLEQSFYLREGDEDRGVLAIPATLAPLTCSLLPLSNDGKLKEMVRGISAELSRNTVRHVVDDSSSSIGKRYARSDELGIPFAVTVDFESAGAVDSDAADSSLAQATVTIRERDSMDQKRCSVAALA 849
            MAHY+ +CWDAE  +  YGW+ECVG +DR+CYDLS H K T  G  L A +  P  P+ V  V   P + + GK F+K AKP+ +AL AL  E    +E  + EKGE  V V    G+S+   T+ +   KR      V E  P V+EPSFG+GRI+Y + E SF +REGDE R   ++PA +APL CS+LPLSN+    + V+ IS+ L+++ V H VDDSS SIG+RYAR+DE+ +P+ +TVDF           D+     T T+RERD+M Q RC +  LA
Sbjct:  236 MAHYACDCWDAECKTS-YGWVECVGCADRSCYDLSQHTKAT--GVRLVAEKPLPQ-PKTVDVVEALPNKAAIGKQFKKEAKPVSDALAALAAEQVDLLEKDLNEKGESEVAV----GDSKVKITKDMVQVKRYQKTVHVDELVPGVIEPSFGIGRIMYAVFEHSFRVREGDEQRTYFSLPAAVAPLKCSVLPLSNNPDFAKFVQQISSALTQHDVAHKVDDSSGSIGRRYARTDEIAVPYGITVDF-----------DTLREPHTATLRERDTMLQVRCPLEDLA 501          
BLAST of mRNA_M-pyrifera_M_contig82919.19371.1 vs. uniprot
Match: A0A6J1NX34_BICAN (Glycine--tRNA ligase n=3 Tax=Satyrini TaxID=127320 RepID=A0A6J1NX34_BICAN)

HSP 1 Score: 219 bits (557), Expect = 2.180e-62
Identity = 128/282 (45.39%), Postives = 177/282 (62.77%), Query Frame = 1
Query:    1 MAHYSKECWDAEIYSDRYGWIECVGISDRACYDLSAHAKHTSHGHGLRAFRLFPDGPRQVREVVVQPRQPSFGKHFRKLAKPLQEALKALPQEDATAVEAAMEKGEQSVE--VSTPDGNSQSVPTELLSCTKRDATVAGVAEFPHVLEPSFGLGRILYCLLEQSFYLREGDEDRGVLAIPATLAPLTCSLLPLSNDGKLKEMVRGISAELSRNTVRHVVDDSSSSIGKRYARSDELGIPFAVTVDFESAGAVDSDAADSSLAQATVTIRERDSMDQKRCSVA 840
            MAHY+ +CWDAE  S  YGW+ECVG +DR+ YDL+ H K T  G  L A +  P  P+Q+  V   P + + GK F+K AK + +AL A+   D+ A+E   EK E   E  ++T +G+ +  P  ++S  K   T+      P V+EPSFG+GRILYC+LE +F +REGDE R   ++PAT+AP+ C++LPLS + + +  VR +S EL+   V H VDDSS SIG+RYAR+DELG+ +A+TVDF           D+     TVT+RERDSM Q R  +A
Sbjct:  434 MAHYACDCWDAECLSS-YGWVECVGCADRSAYDLTQHTKAT--GTRLAAEKKLP-APKQIEVVEAVPNKAAIGKEFKKDAKVINDALAAM---DSAALEQLQEKLESDGEYVLNTANGDFKLTPN-IVSVKKSLKTIHVEEIIPSVIEPSFGVGRILYCILEHNFKMREGDEQRTYFSLPATVAPMKCAVLPLSGNAEFQPFVRELSQELTNVDVSHKVDDSSGSIGRRYARTDELGVLYAITVDF-----------DTMKEPHTVTLRERDSMGQIRLPLA 696          
BLAST of mRNA_M-pyrifera_M_contig82919.19371.1 vs. uniprot
Match: A0A084VFE9_ANOSI (AGAP008604-PA-like protein n=1 Tax=Anopheles sinensis TaxID=74873 RepID=A0A084VFE9_ANOSI)

HSP 1 Score: 210 bits (534), Expect = 4.650e-62
Identity = 125/288 (43.40%), Postives = 173/288 (60.07%), Query Frame = 1
Query:    1 MAHYSKECWDAEIYSDRYGWIECVGISDRACYDLSAHAKHTSHGHGLRAFRLFPDGPRQVREVVVQPRQPSFGKHFRKLAKPLQEALKALPQEDATAVEAAME-KGEQSVEVSTPDGNSQSVPTELLSCTKRDATVAGVAEF-PHVLEPSFGLGRILYCLLEQSFYLREGDEDRGVLAIPATLAPLTCSLLPLSNDGKLKEMVRGISAELSRNTVRHVVDDSSSSIGKRYARSDELGIPFAVTVDFESAGAVDSDAADSSLAQATVTIRERDSMDQKRCSVAALAQEL 858
            MAHY+ +CWDAE  +  YGWIECVG +DR+ YDL+ H K T  G  L A +  P  P+ +    V P +P+ GK F+K AK + EAL  L  E+ + +  ++E  GE ++ V+  DG  +   T  L   K  +    V E  P V+EPSFG+GRI+Y LLE SF +REGDE R   ++P  +APL CS+LPLSN+ +    V+ IS+ L+   V H VDDSS SIG+RYAR+DE+ IP+ +T+DF++     S           VT+RERDSM Q R  +  +A  +
Sbjct:   90 MAHYACDCWDAECLTS-YGWIECVGCADRSAYDLTQHTKAT--GVRLVAEKKLP-APKTIEVTEVVPNKPAIGKAFKKEAKGITEALARLSLEEVSDIGKSLEASGEYTLTVA--DGGPEVKLTNDLIAVKTTSKTVHVEEITPSVIEPSFGIGRIMYSLLEHSFRMREGDEQRSYFSLPPVVAPLKCSVLPLSNNAEFAPFVKKISSALTSVDVSHKVDDSSGSIGRRYARTDEIAIPYGITIDFDTLKEPHS-----------VTLRERDSMKQVRIGLDEVANTI 360          
BLAST of mRNA_M-pyrifera_M_contig82919.19371.1 vs. uniprot
Match: UPI001E27420D (glycine--tRNA ligase n=1 Tax=Melitaea cinxia TaxID=113334 RepID=UPI001E27420D)

HSP 1 Score: 218 bits (554), Expect = 5.890e-62
Identity = 130/292 (44.52%), Postives = 180/292 (61.64%), Query Frame = 1
Query:    1 MAHYSKECWDAEIYSDRYGWIECVGISDRACYDLSAHAKHTSHGHGLRAFRLFPDGPRQVREVVVQPRQPSFGKHFRKLAKPLQEALKALPQEDATAVEAAMEKGEQSVEVSTPDGNSQSVPTELLSCTKRDATVAGVAEFPHVLEPSFGLGRILYCLLEQSFYLREGDEDRGVLAIPATLAPLTCSLLPLSNDGKLKEMVRGISAELSRNTVRHVVDDSSSSIGKRYARSDELGIPFAVTVDFESAGAVDSDAADSSLAQATVTIRERDSMDQKRC---SVAALAQELLGS 867
            MAHY+ +CWDAE  S  YGWIECVG +DR+ YDL+ H K T  G  L A +  P  P+QV  V   P + + GK F+K AK + +AL A+       ++  +E   + + ++T +G+ +  P  L+S  K   TV      P V+EPSFG+GRILYCLLEQ+F +REGDE R   ++P T+AP+ C++LPLS + + +  V+ +S EL+   V H VDDSS SIG+RYAR+DELG+P+A+TVDF           D+     TVT+RERDSM Q R     V A+ ++L  S
Sbjct:  434 MAHYACDCWDAECLSS-YGWIECVGCADRSAYDLTQHTKAT--GIRLAAEKKLP-APKQVEIVEAVPNKATIGKEFKKDAKLINDALAAMNTAALEKLQFELESNGEYI-LTTSNGDFKLTPN-LVSVKKSQKTVHVEEIIPSVIEPSFGIGRILYCLLEQNFRMREGDEQRTYFSLPPTVAPMKCAVLPLSGNVEFQPFVKKLSQELTYVDVSHKVDDSSGSIGRRYARTDELGVPYAITVDF-----------DTMKEPHTVTLRERDSMGQVRLPLDDVPAVVRDLSNS 708          
BLAST of mRNA_M-pyrifera_M_contig82919.19371.1 vs. uniprot
Match: A0A6P7SUW6_OCTVU (Glycine--tRNA ligase n=3 Tax=Octopus TaxID=6643 RepID=A0A6P7SUW6_OCTVU)

HSP 1 Score: 217 bits (553), Expect = 1.250e-61
Identity = 125/284 (44.01%), Postives = 181/284 (63.73%), Query Frame = 1
Query:    1 MAHYSKECWDAEIYSDRYGWIECVGISDRACYDLSAHAKHTSHGHGLRAFRLFPDGPRQVREVVVQPRQPSFGKHFRKLAKPLQEALKALPQEDATAVEAAM-EKGEQSVEVSTPDGNSQSVPTELLSCTKRDATVAGVAEF-PHVLEPSFGLGRILYCLLEQSFYLREGDEDRGVLAIPATLAPLTCSLLPLSNDGKLKEMVRGISAELSRNTVRHVVDDSSSSIGKRYARSDELGIPFAVTVDFESAGAVDSDAADSSLAQATVTIRERDSMDQKRCSVAAL 846
            MAHY+K+CWDAE  +  YGW+ECVG +DR+CYDL+ H K T  G  L A +   + P+ +  V  QP++   GK FR+ AK + + L ++  ED   ++A++ EKGE  ++V+  +     + TE+++      TV  V EF P V+EPSFG+GRI+Y + E +F++REGDE R  L++PA +AP  CS+LPLSN+ +L+  V+ +S EL++  V H VDDSS SIG+RYAR+D + IPF +T+DF           D+     T T+RERDSM Q R  +A L
Sbjct:  467 MAHYAKDCWDAECKTS-YGWVECVGCADRSCYDLTQHTKAT--GIKLVAEKRLAE-PKTIDVVECQPQKGVIGKVFRQNAKSISDHLTSMTSEDLLVLDASLKEKGEVPIKVNDEE---YILKTEMVNIKSYQKTVH-VEEFVPSVIEPSFGIGRIMYSIFEHNFHIREGDEQRTYLSLPAVIAPYKCSVLPLSNNAELQPFVKSLSQELAKIDVSHKVDDSSGSIGRRYARTDAIAIPFGITIDF-----------DTLKEPHTATLRERDSMKQIRAPIADL 731          
BLAST of mRNA_M-pyrifera_M_contig82919.19371.1 vs. uniprot
Match: A0A4C1T149_EUMVA (Glycine--tRNA ligase n=1 Tax=Eumeta variegata TaxID=151549 RepID=A0A4C1T149_EUMVA)

HSP 1 Score: 216 bits (549), Expect = 1.370e-61
Identity = 127/282 (45.04%), Postives = 175/282 (62.06%), Query Frame = 1
Query:    1 MAHYSKECWDAEIYSDRYGWIECVGISDRACYDLSAHAKHTSHGHGLRAFRLFPDGPRQVREVVVQPRQPSFGKHFRKLAKPLQEALKALPQEDATAVEAAMEKGEQSVE--VSTPDGNSQSVPTELLSCTKRDATVAGVAEFPHVLEPSFGLGRILYCLLEQSFYLREGDEDRGVLAIPATLAPLTCSLLPLSNDGKLKEMVRGISAELSRNTVRHVVDDSSSSIGKRYARSDELGIPFAVTVDFESAGAVDSDAADSSLAQATVTIRERDSMDQKRCSVA 840
            MAHY+ +CWDAE  S  YGWIECVG +DR+ YDL+ H + T  G  L A +  P  P+QV  +   P + + GK F+K AK + +AL  +   +A ++E    K +   E  ++TP G  + + + L+S  K   TV      P V+EPSFG+GRILYC+LE +F +REGDE R   ++P T+AP+ C++LPLS + + +  VR +S EL+   V H VDDSS SIG+RYAR+DELG+P+AVTVDF           D+     TVT+RERDSM Q R  +A
Sbjct:  381 MAHYACDCWDAECLSS-YGWIECVGCADRSAYDLTQHTRAT--GVKLAAEKKLP-APKQVEVIEAVPNKAAIGKEFKKDAKIINDALALM---NACSLEDMQNKLDSDSEYILTTPAGEFK-LTSNLVSVKKTQKTVHVEEIIPSVIEPSFGVGRILYCILEHNFRMREGDEQRTYFSLPPTVAPMKCAVLPLSGNAEFQPFVRDLSMELTDVDVSHKVDDSSGSIGRRYARTDELGVPYAVTVDF-----------DTIKEPHTVTLRERDSMGQVRLPIA 643          
BLAST of mRNA_M-pyrifera_M_contig82919.19371.1 vs. uniprot
Match: A0A6M2CUG4_RHIMP (Putative glycyl-trna synthetase ovary overexpressed (Fragment) n=1 Tax=Rhipicephalus microplus TaxID=6941 RepID=A0A6M2CUG4_RHIMP)

HSP 1 Score: 206 bits (523), Expect = 1.490e-61
Identity = 125/279 (44.80%), Postives = 169/279 (60.57%), Query Frame = 1
Query:   19 ECWDAEIYSDRYGWIECVGISDRACYDLSAHAKHTSHGHGLRAFRLFPDGPRQVREVVVQPRQPSFGKHFRKLAKPLQEALKALPQEDATAVEAAM-EKGEQSVEVSTPDGNSQSVPTELLSCTKRDATVAGVAEF-PHVLEPSFGLGRILYCLLEQSFYLREGDEDRGVLAIPATLAPLTCSLLPLSNDGKLKEMVRGISAELSRNTVRHVVDDSSSSIGKRYARSDELGIPFAVTVDFESAGAVDSDAADSSLAQATVTIRERDSMDQKRCSVAALA 849
            +CWDAE  +  YGW+ECVG +DR+CYDLS H K T  G  L A +  P  P+ V  V   P + + GK F+K AKP+ +AL AL       +E  + EKGE  V V    G+S+   T+ +   KR      V E  P V+EPSFG+GRI+Y + E SF +REGDE R   ++PA +APL CS+LPLSN+    + V+ IS+ L+++ V H VDDSS SIG+RYAR+DE+ +P+ +TVDF           D+     T T+RERD+M Q RC +  LA
Sbjct:    4 DCWDAECKTS-YGWVECVGCADRSCYDLSQHTKAT--GVRLVAEKPLPQ-PKTVDVVEALPNKAAIGKQFKKEAKPVSDALAALAATQVDLLEKDLNEKGESEVAV----GDSKVKVTKDMVQVKRYQKTVHVDELVPGVIEPSFGIGRIMYAVFEHSFRVREGDEQRTYFSLPAAVAPLKCSVLPLSNNPDFAKFVQQISSALTQHDVSHKVDDSSGSIGRRYARTDEIAVPYGITVDF-----------DTLREPHTATLRERDTMLQVRCPLEDLA 263          
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig82919.19371.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
B7QL12_IXOSC2.740e-6443.30Glycyl-tRNA synthetase, putative n=2 Tax=Ixodes Ta... [more]
A0A023FZA3_AMBPA6.680e-6443.84Putative glycyl-trna synthetase (Fragment) n=3 Tax... [more]
A0A8J4PZ30_9MYCE9.250e-6442.31Glycine--tRNA ligase n=1 Tax=Polysphondylium viola... [more]
A0A224YZM8_9ACAR4.430e-6345.61Glycine--tRNA ligase n=1 Tax=Rhipicephalus zambezi... [more]
A0A6J1NX34_BICAN2.180e-6245.39Glycine--tRNA ligase n=3 Tax=Satyrini TaxID=127320... [more]
A0A084VFE9_ANOSI4.650e-6243.40AGAP008604-PA-like protein n=1 Tax=Anopheles sinen... [more]
UPI001E27420D5.890e-6244.52glycine--tRNA ligase n=1 Tax=Melitaea cinxia TaxID... [more]
A0A6P7SUW6_OCTVU1.250e-6144.01Glycine--tRNA ligase n=3 Tax=Octopus TaxID=6643 Re... [more]
A0A4C1T149_EUMVA1.370e-6145.04Glycine--tRNA ligase n=1 Tax=Eumeta variegata TaxI... [more]
A0A6M2CUG4_RHIMP1.490e-6144.80Putative glycyl-trna synthetase ovary overexpresse... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig82919contigM-pyrifera_M_contig82919:1..876 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-19
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Properties
Property NameValue
Taxonomic scopeMetazoa
Seed ortholog score222.2
Seed ortholog evalue3.1e-55
Seed eggNOG ortholog10224.XP_002739603.2
Preferred nameGARS
KEGG rclassRC00055,RC00523
KEGG koko:K01880
KEGG ReactionR03654
KEGG Pathwayko00970,map00970
KEGG ModuleM00359,M00360
Hectar predicted targeting categoryother localisation
GOsGO:0000902,GO:0000904,GO:0000959,GO:0002164,GO:0002376,GO:0002520,GO:0003674,GO:0003824,GO:0004081,GO:0004551,GO:0004812,GO:0004820,GO:0005488,GO:0005515,GO:0005575,GO:0005576,GO:0005615,GO:0005622,GO:0005623,GO:0005737,GO:0005739,GO:0005759,GO:0005829,GO:0006082,GO:0006139,GO:0006399,GO:0006412,GO:0006418,GO:0006426,GO:0006518,GO:0006520,GO:0006725,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0007275,GO:0007399,GO:0008150,GO:0008152,GO:0008796,GO:0009058,GO:0009059,GO:0009117,GO:0009165,GO:0009653,GO:0009791,GO:0009987,GO:0010467,GO:0012505,GO:0015959,GO:0015960,GO:0015965,GO:0015966,GO:0016043,GO:0016070,GO:0016358,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0016874,GO:0016875,GO:0018130,GO:0019438,GO:0019538,GO:0019637,GO:0019752,GO:0022008,GO:0030030,GO:0030097,GO:0030141,GO:0030154,GO:0030182,GO:0030424,GO:0031175,GO:0031410,GO:0031974,GO:0031982,GO:0032501,GO:0032502,GO:0032543,GO:0032989,GO:0032990,GO:0034641,GO:0034645,GO:0034654,GO:0034660,GO:0035166,GO:0035167,GO:0042802,GO:0042995,GO:0043005,GO:0043038,GO:0043039,GO:0043043,GO:0043170,GO:0043226,GO:0043227,GO:0043229,GO:0043230,GO:0043231,GO:0043233,GO:0043436,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044281,GO:0044421,GO:0044422,GO:0044424,GO:0044429,GO:0044444,GO:0044446,GO:0044464,GO:0046483,GO:0046983,GO:0048468,GO:0048513,GO:0048534,GO:0048542,GO:0048569,GO:0048666,GO:0048667,GO:0048699,GO:0048731,GO:0048732,GO:0048812,GO:0048813,GO:0048856,GO:0048858,GO:0048869,GO:0055086,GO:0070013,GO:0070062,GO:0070127,GO:0070150,GO:0071704,GO:0071840,GO:0090304,GO:0090407,GO:0097458,GO:0097708,GO:0099503,GO:0120025,GO:0120036,GO:0120039,GO:0140053,GO:0140098,GO:0140101,GO:1901293,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576,GO:1903561
EggNOG free text desc.Glycyl-tRNA synthetase
EggNOG OGs38CGD@33154,3BBNM@33208,3CXBQ@33213,COG0423@1,KOG2298@2759
EC6.1.1.14
COG Functional cat.J
Best tax levelBilateria
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko00002,ko01000,ko01007,ko03016,ko03029
Exons1
Model size876
Cds size876
Stop1
Start1
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622816735.8683913-CDS-M-pyrifera_M_contig82919:0..8761622816735.8683913-CDS-M-pyrifera_M_contig82919:0..876Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig82919 1..876 +
1692278147.8040895-CDS-M-pyrifera_M_contig82919:0..8761692278147.8040895-CDS-M-pyrifera_M_contig82919:0..876Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig82919 1..876 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig82919.19371.1prot_M-pyrifera_M_contig82919.19371.1Macrocystis pyrifera P11B4 malepolypeptideM-pyrifera_M_contig82919 1..876 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_M-pyrifera_M_contig82919.19371.1

>prot_M-pyrifera_M_contig82919.19371.1 ID=prot_M-pyrifera_M_contig82919.19371.1|Name=mRNA_M-pyrifera_M_contig82919.19371.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=292bp
MAHYSKECWDAEIYSDRYGWIECVGISDRACYDLSAHAKHTSHGHGLRAF
RLFPDGPRQVREVVVQPRQPSFGKHFRKLAKPLQEALKALPQEDATAVEA
AMEKGEQSVEVSTPDGNSQSVPTELLSCTKRDATVAGVAEFPHVLEPSFG
LGRILYCLLEQSFYLREGDEDRGVLAIPATLAPLTCSLLPLSNDGKLKEM
VRGISAELSRNTVRHVVDDSSSSIGKRYARSDELGIPFAVTVDFESAGAV
DSDAADSSLAQATVTIRERDSMDQKRCSVAALAQELLGSSK*
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mRNA from alignment at M-pyrifera_M_contig82919:1..876+

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_M-pyrifera_M_contig82919.19371.1 ID=mRNA_M-pyrifera_M_contig82919.19371.1|Name=mRNA_M-pyrifera_M_contig82919.19371.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=876bp|location=Sequence derived from alignment at M-pyrifera_M_contig82919:1..876+ (Macrocystis pyrifera P11B4 male)
ATGGCACACTACTCGAAGGAGTGCTGGGATGCTGAGATCTACAGCGATAG ATACGGCTGGATTGAGTGTGTGGGTATCAGTGACCGTGCGTGCTACGACC TCTCTGCCCATGCCAAGCACACCAGCCACGGCCATGGCCTCAGAGCTTTC AGGCTCTTTCCTGATGGGCCAAGACAGGTACGTGAAGTGGTGGTGCAGCC GCGACAGCCGTCGTTCGGCAAACACTTCAGGAAGCTGGCAAAGCCTCTGC AGGAGGCACTCAAGGCCCTCCCCCAAGAGGACGCCACTGCGGTGGAGGCA GCGATGGAGAAGGGCGAGCAGAGTGTCGAGGTGTCCACGCCTGATGGGAA CAGCCAGTCGGTGCCAACTGAGCTGCTCAGTTGCACCAAGCGCGACGCCA CCGTGGCTGGCGTGGCCGAGTTCCCCCATGTGTTGGAGCCCTCCTTTGGG CTGGGGAGGATCCTCTACTGCCTGCTGGAGCAGAGCTTCTACTTGAGGGA AGGGGACGAAGACAGAGGAGTGCTGGCGATTCCCGCTACTCTCGCACCGC TCACTTGCTCCCTTCTTCCCCTGAGCAACGATGGCAAGTTGAAAGAGATG GTGAGGGGCATCTCTGCAGAGCTCTCGAGGAATACAGTCCGCCATGTGGT GGACGACTCGAGCAGCTCCATTGGCAAGAGGTACGCCAGGTCGGACGAGC TCGGGATTCCCTTCGCTGTGACCGTGGACTTCGAGAGTGCTGGAGCAGTG GATAGCGATGCAGCTGATAGTTCTTTGGCGCAAGCCACAGTGACAATCAG GGAGAGAGATTCAATGGATCAGAAGCGGTGCTCCGTTGCAGCACTTGCGC AGGAGCTCCTTGGGAGCAGCAAATAA
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Coding sequence (CDS) from alignment at M-pyrifera_M_contig82919:1..876+

>mRNA_M-pyrifera_M_contig82919.19371.1 ID=mRNA_M-pyrifera_M_contig82919.19371.1|Name=mRNA_M-pyrifera_M_contig82919.19371.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=1752bp|location=Sequence derived from alignment at M-pyrifera_M_contig82919:1..876+ (Macrocystis pyrifera P11B4 male)
ATGGCACACTACTCGAAGGAGTGCTGGGATGCTGAGATCTACAGCGATAG
ATACGGCTGGATTGAGTGTGTGGGTATCAGTGACCGTGCGTGCTACGACC
TCTCTGCCCATGCCAAGCACACCAGCCACGGCCATGGCCTCAGAGCTTTC
AGGCTCTTTCCTGATGGGCCAAGACAGGTACGTGAAGTGGTGGTGCAGCC
GCGACAGCCGTCGTTCGGCAAACACTTCAGGAAGCTGGCAAAGCCTCTGC
AGGAGGCACTCAAGGCCCTCCCCCAAGAGGACGCCACTGCGGTGGAGGCA
GCGATGGAGAAGGGCGAGCAGAGTGTCGAGGTGTCCACGCCTGATGGGAA
CAGCCAGTCGGTGCCAACTGAGCTGCTCAGTTGCACCAAGCGCGACGCCA
CCGTGGCTGGCGTGGCCGAGTTCCCCCATGTGTTGGAGCCCTCCTTTGGG
CTGGGGAGGATCCTCTACTGCCTGCTGGAGCAGAGCTTCTACTTGAGGGA
AGGGGACGAAGACAGAGGAGTGCTGGCGATTCCCGCTACTCTCGCACCGC
TCACTTGCTCCCTTCTTCCCCTGAGCAACGATGGCAAGTTGAAAGAGATG
GTGAGGGGCATCTCTGCAGAGCTCTCGAGGAATACAGTCCGCCATGTGGT
GGACGACTCGAGCAGCTCCATTGGCAAGAGGTACGCCAGGTCGGACGAGC
TCGGGATTCCCTTCGCTGTGACCGTGGACTTCGAGAGTGCTGGAGCAGTG
GATAGCGATGCAGCTGATAGTTCTTTGGCGCAAGCCACAGTGACAATCAG
GGAGAGAGATTCAATGGATCAGAAGCGGTGCTCCGTTGCAGCACTTGCGC
AGGAGCTCCTTGGGAGCAGCAAATAAATGGCACACTACTCGAAGGAGTGC
TGGGATGCTGAGATCTACAGCGATAGATACGGCTGGATTGAGTGTGTGGG
TATCAGTGACCGTGCGTGCTACGACCTCTCTGCCCATGCCAAGCACACCA
GCCACGGCCATGGCCTCAGAGCTTTCAGGCTCTTTCCTGATGGGCCAAGA
CAGGTACGTGAAGTGGTGGTGCAGCCGCGACAGCCGTCGTTCGGCAAACA
CTTCAGGAAGCTGGCAAAGCCTCTGCAGGAGGCACTCAAGGCCCTCCCCC
AAGAGGACGCCACTGCGGTGGAGGCAGCGATGGAGAAGGGCGAGCAGAGT
GTCGAGGTGTCCACGCCTGATGGGAACAGCCAGTCGGTGCCAACTGAGCT
GCTCAGTTGCACCAAGCGCGACGCCACCGTGGCTGGCGTGGCCGAGTTCC
CCCATGTGTTGGAGCCCTCCTTTGGGCTGGGGAGGATCCTCTACTGCCTG
CTGGAGCAGAGCTTCTACTTGAGGGAAGGGGACGAAGACAGAGGAGTGCT
GGCGATTCCCGCTACTCTCGCACCGCTCACTTGCTCCCTTCTTCCCCTGA
GCAACGATGGCAAGTTGAAAGAGATGGTGAGGGGCATCTCTGCAGAGCTC
TCGAGGAATACAGTCCGCCATGTGGTGGACGACTCGAGCAGCTCCATTGG
CAAGAGGTACGCCAGGTCGGACGAGCTCGGGATTCCCTTCGCTGTGACCG
TGGACTTCGAGAGTGCTGGAGCAGTGGATAGCGATGCAGCTGATAGTTCT
TTGGCGCAAGCCACAGTGACAATCAGGGAGAGAGATTCAATGGATCAGAA
GCGGTGCTCCGTTGCAGCACTTGCGCAGGAGCTCCTTGGGAGCAGCAAAT
AA
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