mRNA_M-pyrifera_M_contig82908.19370.1 (mRNA) Macrocystis pyrifera P11B4 male
Overview
Homology
BLAST of mRNA_M-pyrifera_M_contig82908.19370.1 vs. uniprot
Match: D7FS27_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FS27_ECTSI) HSP 1 Score: 165 bits (417), Expect = 8.260e-47 Identity = 122/169 (72.19%), Postives = 130/169 (76.92%), Query Frame = 1 Query: 13 AAGGMFSAGALFPLEVIKTNLQAHTKNRT----TXXXXXXXXXXXXXXXXXXXXXXXLXXXXXXXXXXXXEMQAWRNHTKNQQAAAPSAVSIARDIHYREGLPGFYKGVWYASGQSGLEKAAYFYGYGWLKALALRVGGGGGELSTVADLGLGYLAEAFHLPFTIPIEV 507 AAGGMFSAGAL+PLEVIKTNLQAHTK T XXXXXXXXXXXXXXXX XXXXXXXXXXXX + Q PS S+A+DI+ REG+ G Y+GVWYAS QSG+EKAAYFYGYGWLKALALR GGG GELST DLGLGYLAEAFHLPFTIPIEV Sbjct: 11 AAGGMFSAGALYPLEVIKTNLQAHTKQSTGRPSPSQTEEAEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEERQLDCPPSVASVAKDIYSREGIAGLYRGVWYASTQSGVEKAAYFYGYGWLKALALR-GGGRGELSTAKDLGLGYLAEAFHLPFTIPIEV 178
BLAST of mRNA_M-pyrifera_M_contig82908.19370.1 vs. uniprot
Match: A0A835ZGU7_9STRA (Mitochondrial carrier domain-containing protein (Fragment) n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZGU7_9STRA) HSP 1 Score: 77.4 bits (189), Expect = 5.540e-14 Identity = 40/84 (47.62%), Postives = 54/84 (64.29%), Query Frame = 1 Query: 256 APSAVSIARDIHYREGLPGFYKGVWYASGQSGLEKAAYFYGYGWLKALALRVGGGGGELSTVADLGLGYLAEAFHLPFTIPIEV 507 A S++S+AR I G G Y GV Y+ + LEKAAYFYGYGWL+ A+ GG +AD+ LGY A+A HLP T+P+++ Sbjct: 1 ARSSLSVARHIIQCRGAAGLYDGVEYSVLEGALEKAAYFYGYGWLRRAAVAARGGRPP-GALADVALGYAADACHLPLTLPLQL 83
BLAST of mRNA_M-pyrifera_M_contig82908.19370.1 vs. uniprot
Match: K8Z8N5_NANGC (Peroxisomal membrane protein pmp47b n=2 Tax=Monodopsidaceae TaxID=425072 RepID=K8Z8N5_NANGC) HSP 1 Score: 74.3 bits (181), Expect = 1.030e-12 Identity = 82/172 (47.67%), Postives = 107/172 (62.21%), Query Frame = 1 Query: 13 AAGGMFSAGALFPLEVIKTNLQAH-TKNRTTXXXXXXXXXXXXXXXXXXXXXXXLXXXXXXXXXXXXEMQAWR------NHTKNQQAAAPSAVSIARDIHYREGLPGFYKGVWYASGQSGLEKAAYFYGYGWLKALALRVGGGGGELSTVADLGLGYLAEAFHLPFTIPIEV 507 A GG S L+PLEVIKT +QA TK + XXXXXXXXXXXXXXXXXXX XXXXXXXXXX + + + ++ ++A + +A++I+ R GL GF+ GV Y+S QS LEK+ YFY Y +K + + GG +L +GYL+E HLP T+PIEV Sbjct: 14 AEGGAISTAVLYPLEVIKTVIQASKTKEQKQSRQAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAADPLSGETAPEEGDEGSDEDSSALTTQDVAKEIYRRAGLGGFFGGVQYSSLQSSLEKSIYFYAYSTMKGVVKVLNGG--RFGVRENLLVGYLSEVVHLPVTVPIEV 183
BLAST of mRNA_M-pyrifera_M_contig82908.19370.1 vs. uniprot
Match: W7U3F7_9STRA (DnaJ subfamily C, member 28 n=1 Tax=Nannochloropsis gaditana TaxID=72520 RepID=W7U3F7_9STRA) HSP 1 Score: 74.3 bits (181), Expect = 2.140e-12 Identity = 82/172 (47.67%), Postives = 107/172 (62.21%), Query Frame = 1 Query: 13 AAGGMFSAGALFPLEVIKTNLQAH-TKNRTTXXXXXXXXXXXXXXXXXXXXXXXLXXXXXXXXXXXXEMQAWR------NHTKNQQAAAPSAVSIARDIHYREGLPGFYKGVWYASGQSGLEKAAYFYGYGWLKALALRVGGGGGELSTVADLGLGYLAEAFHLPFTIPIEV 507 A GG S L+PLEVIKT +QA TK + XXXXXXXXXXXXXXXXXXX XXXXXXXXXX + + + ++ ++A + +A++I+ R GL GF+ GV Y+S QS LEK+ YFY Y +K + + GG +L +GYL+E HLP T+PIEV Sbjct: 286 AEGGAISTAVLYPLEVIKTVIQASKTKEQKQSRQAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAADPLSGETAPEEGDEGSDEDSSALTTQDVAKEIYRRAGLGGFFGGVQYSSLQSSLEKSIYFYAYSTMKGVVKVLNGG--RFGVRENLLVGYLSEVVHLPVTVPIEV 455
BLAST of mRNA_M-pyrifera_M_contig82908.19370.1 vs. uniprot
Match: A0A7S4NE59_9STRA (Hypothetical protein n=1 Tax=Odontella aurita TaxID=265563 RepID=A0A7S4NE59_9STRA) HSP 1 Score: 66.2 bits (160), Expect = 1.130e-9 Identity = 54/183 (29.51%), Postives = 77/183 (42.08%), Query Frame = 1 Query: 13 AAGGMFSAGALFPLEVIKTNLQAHTKNRTTXXXXXXXXXXXXXXXXXXXXXXXLXXXXXXXXXXXXE-------MQAWRNHTKN------------QQAAAPSAVSIARDIHYREGLPGFYKGVWYASGQSGLEKAAYFYGYGWLKALALRVGGGGGELSTVADLGLGYLAEAFHLPFTIPIE 504 + GG FSA AL+PLE++KT +QA TK + E QA KN +Q A + AR +H G+ FY G+ ++ QS +EK+ YF+ Y +LK A + G + T+ +L LG LAE HLP T+PI+ Sbjct: 14 SVGGAFSASALYPLEMLKTRMQAETKVKKKKGGANEKQPEETAEIASSSADDGEGEEGAIPVPSSDEETEPTRQKQAAHKKGKNAQPEDRGEDDEDEQEAPLGMIPYARKMHAEGGIGAFYSGIETSAIQSAMEKSLYFFAYTFLKN-AYKTLTGLTSIDTIPNLVLGSLAEWAHLPVTLPID 195
BLAST of mRNA_M-pyrifera_M_contig82908.19370.1 vs. uniprot
Match: A0A7S3PY25_9STRA (Hypothetical protein n=1 Tax=Chaetoceros debilis TaxID=122233 RepID=A0A7S3PY25_9STRA) HSP 1 Score: 62.0 bits (149), Expect = 2.930e-8 Identity = 46/164 (28.05%), Postives = 72/164 (43.90%), Query Frame = 1 Query: 13 AAGGMFSAGALFPLEVIKTNLQAHTKNRTTXXXXXXXXXXXXXXXXXXXXXXXLXXXXXXXXXXXXEMQAWRNHTKNQQAAAPSAVSIARDIHYREGLPGFYKGVWYASGQSGLEKAAYFYGYGWLKALALRVGGGGGELSTVADLGLGYLAEAFHLPFTIPIE 504 + G FSA AL+PLEV+KT +QA +K + +++ K + SAV A+ ++ G+ FY G+ ++ QS EKA YF+ Y LK + + G ++ +L LG LAE HLP T+P++ Sbjct: 13 SVAGAFSASALYPLEVLKTKMQAESKGS-------------------------VKKSENDEKDASNDIEDTEIVKKEEDQKPISAVQYAKSMYSEGGVAPFYAGIETSAFQSATEKALYFFAYTALKN-SYSLFSGSNKMGPAINLILGCLAEWAHLPLTLPLD 150
BLAST of mRNA_M-pyrifera_M_contig82908.19370.1 vs. uniprot
Match: A0A6G0XX90_9STRA (Uncharacterized protein n=1 Tax=Aphanomyces euteiches TaxID=100861 RepID=A0A6G0XX90_9STRA) HSP 1 Score: 61.6 bits (148), Expect = 3.640e-8 Identity = 37/94 (39.36%), Postives = 53/94 (56.38%), Query Frame = 1 Query: 226 RNHTKNQQAAAPSAVSIARDIHYREGLPGFYKGVWYASGQSGLEKAAYFYGYGWLKALALRVGGGGGELSTVADLGLGYLAEAFHLPFTIPIEV 507 R +++++ A I D+ EG+ FYKGV Y + QS + K YFY Y + + L LST A+L +GYLAE FHLP ++P+EV Sbjct: 36 RMQSESKKDAKDKKPLITWDV---EGVLSFYKGVEYKAAQSTISKFLYFYAYTAMTQMLLSPNAK--SLSTAANLVVGYLAEMFHLPISLPLEV 124
BLAST of mRNA_M-pyrifera_M_contig82908.19370.1 vs. uniprot
Match: K0RBA8_THAOC (Uncharacterized protein n=1 Tax=Thalassiosira oceanica TaxID=159749 RepID=K0RBA8_THAOC) HSP 1 Score: 59.3 bits (142), Expect = 2.660e-7 Identity = 50/162 (30.86%), Postives = 74/162 (45.68%), Query Frame = 1 Query: 19 GGMFSAGALFPLEVIKTNLQAHTKNRTTXXXXXXXXXXXXXXXXXXXXXXXLXXXXXXXXXXXXEMQAWRNHTKNQQAAAPSAVSIARDIHYREGLPGFYKGVWYASGQSGLEKAAYFYGYGWLKALALRVGGGGGELSTVADLGLGYLAEAFHLPFTIPIE 504 GGMFSA AL+PLE++KT +QA +K +++A + +AAA S A + +EG FY GV ++ QS EKA YF+ Y +LK + + G + +++L LG AE HLP T+PI+ Sbjct: 15 GGMFSASALYPLEILKTRMQAESK------------------APKGDGDEEEKKDAAEVLTPEEDLKA-----RYTEAAAEGMGSYASLMLEKEGGGAFYTGVVTSAVQSATEKALYFFAYTFLKNGYVDLTGVQ-NIGAMSNLVLGCFAEWAHLPVTLPID 152
BLAST of mRNA_M-pyrifera_M_contig82908.19370.1 vs. uniprot
Match: A0A448ZI96_9STRA (Uncharacterized protein n=1 Tax=Pseudo-nitzschia multistriata TaxID=183589 RepID=A0A448ZI96_9STRA) HSP 1 Score: 58.9 bits (141), Expect = 4.030e-7 Identity = 49/174 (28.16%), Postives = 73/174 (41.95%), Query Frame = 1 Query: 13 AAGGMFSAGALFPLEVIKTNLQAHTKNRTTXXXXXXXXXXXXXXXXXXXXXXXLXXXXXXXXXXXXEMQAWRNHTKNQQAAAPSAVSIARDIHYREGLPGFYKGVWYASGQSGLEKAAYFYGYGWLK------ALALRVGGGGG----ELSTVADLGLGYLAEAFHLPFTIPIE 504 A GG S+GAL+P+EV+KT +QA T + N+ A ++ AR+I+ EG+ F+ G+ ++ QS +EKA YF+ Y LK + R G + S +A + LG LAE HLP T+PI+ Sbjct: 15 AVGGAISSGALYPMEVLKTRMQAEGDGSTNDTNNSHCDLPRDGKSHQKEGGEDVDIGD------------------NKPKPATHSLDYARNIYSSEGIGVFFDGMEVSALQSAIEKALYFFAYTALKRSYTHLTVRRRTRQNGSPKQQQPSAMASVLLGCLAEWVHLPITLPID 170
BLAST of mRNA_M-pyrifera_M_contig82908.19370.1 vs. uniprot
Match: A0A7S2P208_9STRA (Hypothetical protein n=2 Tax=Leptocylindrus danicus TaxID=163516 RepID=A0A7S2P208_9STRA) HSP 1 Score: 58.5 bits (140), Expect = 5.020e-7 Identity = 44/168 (26.19%), Postives = 71/168 (42.26%), Query Frame = 1 Query: 13 AAGGMFSAGALFPLEVIKTNLQAHTKNRTTXXXXXXXXXXXXXXXXXXXXXXXLXXXXXXXXXXXXEMQAWRNHTKNQQAAAP----SAVSIARDIHYREGLPGFYKGVWYASGQSGLEKAAYFYGYGWLKALALRVGGGGGELSTVADLGLGYLAEAFHLPFTIPIE 504 + GG SA L+PLEV+KT +QA + + ++Q ++ P SA+ ++++ G+ FY G+ ++ QS EKA YF+ Y + K + GG + T +L LG +AE HLP T+PI+ Sbjct: 16 SVGGAISASVLYPLEVLKTKMQAVESSDAPAEPSSGDSNAGSEDTTTSASYEKIA-----------------EDAEDQDSSKPKKNLSAIEFTKEMYKDGGVAVFYDGIGTSAFQSACEKALYFFAYTYFKNFYKGIKGG--AIGTTENLILGGMAEWAHLPITLPID 164 The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig82908.19370.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90) Total hits: 17
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_M-pyrifera_M_contig82908.19370.1 >prot_M-pyrifera_M_contig82908.19370.1 ID=prot_M-pyrifera_M_contig82908.19370.1|Name=mRNA_M-pyrifera_M_contig82908.19370.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=169bp MRHQAAGGMFSAGALFPLEVIKTNLQAHTKNRTTTAAAAAAAAEEGKEREback to top mRNA from alignment at M-pyrifera_M_contig82908:130..786- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_M-pyrifera_M_contig82908.19370.1 ID=mRNA_M-pyrifera_M_contig82908.19370.1|Name=mRNA_M-pyrifera_M_contig82908.19370.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=657bp|location=Sequence derived from alignment at M-pyrifera_M_contig82908:130..786- (Macrocystis pyrifera P11B4 male)back to top Coding sequence (CDS) from alignment at M-pyrifera_M_contig82908:130..786- >mRNA_M-pyrifera_M_contig82908.19370.1 ID=mRNA_M-pyrifera_M_contig82908.19370.1|Name=mRNA_M-pyrifera_M_contig82908.19370.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=1014bp|location=Sequence derived from alignment at M-pyrifera_M_contig82908:130..786- (Macrocystis pyrifera P11B4 male)back to top |