mRNA_M-pyrifera_M_contig82870.19362.1 (mRNA) Macrocystis pyrifera P11B4 male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_M-pyrifera_M_contig82870.19362.1
Unique NamemRNA_M-pyrifera_M_contig82870.19362.1
TypemRNA
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Homology
BLAST of mRNA_M-pyrifera_M_contig82870.19362.1 vs. uniprot
Match: UPI001992C3F7 (Fibronectin type III domain-containing protein n=1 Tax=bacterium TaxID=1869227 RepID=UPI001992C3F7)

HSP 1 Score: 101 bits (252), Expect = 2.270e-21
Identity = 74/269 (27.51%), Postives = 127/269 (47.21%), Query Frame = 1
Query:    4 PYALVAAGATIGALEISD--SVGFIQQAKQAQSIFGMTLMSADFSQLAADGLGLRLVDKQVEPGKKYVYWVELADSIARIPWQQLDSTTIMARGYRQQLQAREGRNEAFYTGEYVNKSAVHGLKAKSGEHQVTLRWPADNGDRFSAYIIERSNNGGLSFDTLTALPLMPQPLTIKETSVEWEIVNSGKQESMFQYIDSLVNNYVPYTYRITGLDAFADSSDPVSVVSMGKDLTPPKNPQIHSGKYLKEEGVIRLSWRLQEVPDDFGDLA 804
            PY + AAG  +   ++S   +   + +A+   + F + +++A+   +AADGLGLRLVD+ V  G +++Y V  A +   + +    +   +AR                    Y    A H L+A++ +  + + W       +  YIIERS++ G ++  LTA P+    L  ++T  E E            Y+D+   NY  Y YR+ G+  FAD S    V  M +DLTPP  P+ +    + +  + R +W   ++P+  GDL+
Sbjct:  106 PY-VAAAGQMLHDAKLSSDANASMLDRAQALGNRFQIAILAANLDPVAADGLGLRLVDRDVRSGDRFIYRVRSASTSEDVRFDTAIAVVDVAR--------------------YETPPAPHALEAEARDGSIRVHWSPLPIGYYIGYIIERSDDNGRTYRVLTAAPIASTQLDGQQTVSEPE------------YLDTTTVNYRRYHYRVRGITHFADRSLTADVSGMSRDLTPPPAPRANKATQIGKRAM-RTTW---DMPETSGDLS 337          
BLAST of mRNA_M-pyrifera_M_contig82870.19362.1 vs. uniprot
Match: A0A7V3CWT8_9BACT (Fibronectin type-III domain-containing protein (Fragment) n=2 Tax=Ignavibacteria TaxID=795747 RepID=A0A7V3CWT8_9BACT)

HSP 1 Score: 101 bits (252), Expect = 1.330e-20
Identity = 74/251 (29.48%), Postives = 111/251 (44.22%), Query Frame = 1
Query:  100 FGMTLMSADFSQLAADGLGLRLVDKQVEPGKKYVYWVELADSIARIPWQQLDSTTIMARGYRQQLQAREGRNEAFYTGEYVNKSAVHGLKA--------KSGEHQVTLRWPADNGDRFSAYIIERSNNGGLSFDTLTALPLM-PQPLTIKETSVEWEIVNSGKQESMFQYIDSLVNNYVPYTYRITGLDAFADSSDPVSVVSMGKDLTPPKNPQIHSGKYLKEEGVIRLSWRLQEVPDDFGDLAIYRSNDP 825
            +   L +AD     A  +GLR VD+ V+ G+ YVY V LA                            E  NE  +   YV        K         +SG+  +TL+W  +   RFS Y + RS +G   +  L  +P++ P P   KE + + E          F +IDS   NY  Y Y+I G++AF + S+P  + +  KD+T P  P +   K  + + V  L+W+L+E PDD     I RS++P
Sbjct:  152 YSFALFAADNDAQTASAMGLRFVDRNVKEGESYVYRVYLA----------------------------ENTNEYSFDTAYVIVDVTTAEKIPSPIDLTFESGDESITLKWKDNPVVRFSGYYVYRSEDGK-DYKKLNDMPVIFPNP---KEETEQQE----------FSFIDSATVNYKNYFYKIYGVNAFGELSEPAEIKAYSKDITAPSAPILEKPKQFRSDEV-SLTWKLEETPDDLNGFVIARSDNP 359          
BLAST of mRNA_M-pyrifera_M_contig82870.19362.1 vs. uniprot
Match: A0A357JEM7_9FLAO (Fibronectin type-III domain-containing protein n=1 Tax=Flavobacteriaceae bacterium TaxID=1871037 RepID=A0A357JEM7_9FLAO)

HSP 1 Score: 99.0 bits (245), Expect = 1.220e-19
Identity = 78/268 (29.10%), Postives = 125/268 (46.64%), Query Frame = 1
Query:    1 DPYALVAAGATIGALEISD----SVGFIQQAKQAQSIFGMTLMSADFSQLAADGLGLRLVDKQVEPGKKYVYWVELADSIARIPWQQLDSTTIMARGYRQQLQAREGRNEAFYTGEYVNKSAVHGL-KAKSGEHQVTLRWPADNGDRFSAYIIERSNNGGLSFDTLTALPLMPQPLTIKETSVEWEIVNSGKQESMFQYIDSLVNNYVPYTYRITGLDAFADSSDPVSVV-SMGKDLTPPKNPQIHSGKYLKEEGVIRLSWRLQEVPD 786
            D YA +AA A  G   ++D    +  F+Q+A +  S++G +L++A+FS+ AA    LR  D  ++P   YVY V    S A   +  +D+  +M +G           NE       + K+ +  + K +  E  + L+W     D FSA+ IERS + G +F  L   P +               V   ++     Y DS+   Y    YRI G++ FA+ S+P  VV +MG+D TPP  P+    +     G ++++W   EV D
Sbjct:  111 DKYAAIAAQAIHGKRNLADPSNTNSSFLQKANELNSLYGFSLLAAEFSRNAAIASALRFEDSDIDPTMNYVYRVY---SNAASEFYPIDTAYVMLKG-----------NE-------ITKTEIPIIDKVEESEKFIVLKWDRAYKDDFSAWYIERSLDNGKTFQRLNDDPYIHS-------------VGKNQRADYIVYRDSVKQLYKKQQYRIIGINTFAELSEPSPVVIAMGRDKTPPPTPRNVKAEQTNTNG-LKITWDADEVED 343          
BLAST of mRNA_M-pyrifera_M_contig82870.19362.1 vs. uniprot
Match: A0A1S2VLP6_9BACT (Fibronectin type-III domain-containing protein n=1 Tax=Arsenicibacter rosenii TaxID=1750698 RepID=A0A1S2VLP6_9BACT)

HSP 1 Score: 96.7 bits (239), Expect = 7.470e-19
Identity = 80/252 (31.75%), Postives = 124/252 (49.21%), Query Frame = 1
Query:   97 IFGMTLMSADFSQLAADGLGLRLVDKQVEPGKKYVYWV-ELADSIARIPWQQLDSTTIMARGYRQQLQAREGRNEAFYTGEYVNKSAVHGLKAKSGEHQVTLRWPA-DNGDRFSAYIIERSNNGGLSFDTLTALPLMPQPLTIKETSVEWEIVNSGKQESMFQYIDSLVNNYVPYTYRITGLDAFADSSDPVSVVS-MGKDLTPPKNPQIHSGKYLKEEG--VIRLSWRLQEVPDDFGDLAIYRSNDPDLPY 837
            + G+TL  AD +   A+G+GLR  D+ V+ G+ Y Y +  LAD                A+ Y   ++     N+    GE   + A+  + A   +  + LRW      +RFSAY IERS++GG +F  L   P M       ++SV        +  ++F+Y DS+  NY PY YR+ G+  FA+ S P  V++  G D TPP+     S   +K +G   ++LSW+  +   DF   A+ RSN P+ P+
Sbjct:  154 MIGLTL--ADANARHAEGMGLRFTDRNVQKGEVYFYTLYPLAD----------------AKNYPTPIEKATIVNDG--PGE---RPAMVPVMADPADRTIKLRWSRMATQERFSAYYIERSDDGGRTFKRLNRRPWM-------QSSV-------AQFATVFEYKDSVAQNYRPYQYRVIGITPFAELSQPSPVLTAQGIDQTPPRAA---SNVTVKHKGGTEVQLSWQYGKAAGDFAGFAVGRSNAPNGPF 365          
BLAST of mRNA_M-pyrifera_M_contig82870.19362.1 vs. uniprot
Match: UPI001F25C983 (hypothetical protein n=1 Tax=Fulvivirga sp. W9P-11 TaxID=2904246 RepID=UPI001F25C983)

HSP 1 Score: 95.9 bits (237), Expect = 1.360e-18
Identity = 81/278 (29.14%), Postives = 130/278 (46.76%), Query Frame = 1
Query:    7 YALVAAGATIGALEISDSVGFIQQAKQAQSIFGMTLMSADFSQLAADGLGLRLVDKQVEPGKKYVYWVELADSIARIPWQQLDSTTIMARGYRQQLQAREGRNEAFYTGEYVNKSAVHGLKAKSGEHQVTLRWP-ADNGDRFSAYIIERSNNGGLSFDTLTALPLMPQPLTIKETSVEWEIVNSGKQESMFQYIDSLVNNYVPYTYRITGLDAFADSSDPVSVV--SMGKDLTPPKNPQIHSGKYLKEEGVIRLSWRLQEVPDDFGDLAIYRSNDPDL 831
            YA +AA    G  + S  +   ++A+Q +++ G  LM+A+FS +AA+GLGLR VD  + P KKY+Y +    + +  P   +D+  +M  G                  E     AV   + K  E  + + W  A +   FS Y IE+S N   +F  +   P +  PL             S   +S   + DS V NY P+ YRI G++ F + + PVS V  +MG+D TPP  P I++       G +++SW +     +     I R ++P++
Sbjct:  103 YAALAAEILYGESDYSPDI--FRKAEQFKNLLGSALMAAEFSSVAAEGLGLRYVDTDINPDKKYLYRLYSLGASSDYP---IDTAYLMISG-----------------NEIDANPAVDIAEVKEREGHIEIWWDRAAHEKLFSGYYIEKSTNKK-NFQRINQAPFVSSPLP-----------GSSISKSYIIFTDS-VENYQPHYYRIIGINTFGEQA-PVSKVIKAMGRDRTPPP-PPINAKAEQIAPGKMKISWEISGDDKNIKGFLIARGHNPEV 343          
BLAST of mRNA_M-pyrifera_M_contig82870.19362.1 vs. uniprot
Match: A0A7G5GVI2_9BACT (Uncharacterized protein n=1 Tax=Spirosoma sp. KCTC 72228 TaxID=2710596 RepID=A0A7G5GVI2_9BACT)

HSP 1 Score: 95.9 bits (237), Expect = 1.370e-18
Identity = 69/243 (28.40%), Postives = 110/243 (45.27%), Query Frame = 1
Query:  112 LMSADFSQLAADGLGLRLVDKQVEPGKKYVYWVELADSIARIPWQQLDSTTIMARGYRQQLQAREGRNEAFYTGEYVNKSAVHGLKAKSGEHQVTLRWPADNGDR-FSAYIIERSNNGGLSFDTLTALPLMPQPLTIKETSVEWEIVNSGKQESMFQYIDSLVNNYVPYTYRITGLDAFADSSDPVSVVS-MGKDLTPPKNPQIHSGKYLKEEGVIRLSWRLQEVPDDFGDLAIYRSNDPDLP 834
            LM AD +   A+G+GL  +D+ V+ G +Y Y+                   +  R   + L   E +      G Y  +  +  ++A+  +H + L W     D  FSAY IERS +GG +F  +  +P    P+                +++++ Y+DSL  NYV Y YR+ G+  FA+ S P  V++  G DLTPP   +    K+L    V R++W    +  DF    I R +D + P
Sbjct:  163 LMLADENARHAEGMGLGYIDRAVKKGVQYFYY-------------------LTPRYDGKLLSVDEQKVLVSNVGPYT-RPPMPVVRAEQKDHAIKLVWDRQVTDELFSAYYIERSQDGGRTFRRMNRMPYTQAPIQ--------------SEQALYSYVDSLKQNYVKYQYRVVGISPFAERSIPSPVITAQGVDLTPPVGARNVQAKHLSGSKV-RITWEQPSMSSDFAGYIIARGSDENKP 370          
BLAST of mRNA_M-pyrifera_M_contig82870.19362.1 vs. uniprot
Match: A0A0P1MWC9_9BACT (Uncharacterized protein n=2 Tax=Candidatus Kryptonium thompsoni TaxID=1633631 RepID=A0A0P1MWC9_9BACT)

HSP 1 Score: 95.1 bits (235), Expect = 2.500e-18
Identity = 83/281 (29.54%), Postives = 127/281 (45.20%), Query Frame = 1
Query:    4 PYALVAAGATIGA-LEISDS---VGFIQQAKQAQSI-FGMTLMSADFSQLAADGLGLRLVDKQVEPGKKYVYWVELADSIARIPWQQLDSTTIMARGYRQQLQAREGRNEAFYTGEYVNK-SAVHGLKAKSGEHQVTLRWPADNGDR-FSAYIIERSNNGGLSFDTLTALPLMPQPLTIKETSVEWEIVNSGKQESMFQYIDSLVN-NYVPYTYRITGLDAFADSSDPVSVV-SMGKDLTPPKNPQIHSGKYLKEEGVIRLSWRLQEVPDDFGDLAIYRSN 819
            PYA +A  A  G    IS+    +  I+   Q Q + +   L +AD     A+GLGLR+VDK  E  ++Y+Y +        IP+      + M  GY             F     +        L+    E+Q+ LRW  +N    F+A+ IERS +G                + + +T       N  +Q+    Y D+ ++ NY+PY YR+ G+  FA+ S+P  V+ +MG+D T P+ P I S K +K  G I L W+++  P D     I RSN
Sbjct:  108 PYAPIAVQALYGKQFRISEQNFDIANIRTLSQEQELRYSFALFTADMDAQVAEGLGLRVVDKNFEKDEQYLYVI--------IPY----DVSQMDTGY------------VFVDTRLLTPVPKAPNLEKNEMENQIELRWSVENMQNVFTAFWIERSEDG-------------KNWVRLNKTPYIQATQNPNQQDKYIYYTDTTISRNYLPYKYRLIGITPFAELSEPSEVIEAMGRDRTAPQPPVITSIKDVK--GKIELEWKIENPPSDLKGFIIGRSN 349          
BLAST of mRNA_M-pyrifera_M_contig82870.19362.1 vs. uniprot
Match: UPI00159B89A4 (fibronectin type III domain-containing protein n=1 Tax=Spirosoma sp. KUDC1026 TaxID=2745947 RepID=UPI00159B89A4)

HSP 1 Score: 93.2 bits (230), Expect = 1.120e-17
Identity = 73/264 (27.65%), Postives = 117/264 (44.32%), Query Frame = 1
Query:   64 GFIQQAKQAQSIFGMTLMSADFSQLAADGLGLRLVDKQVEPGKKYVYWVELADSIARIPWQQLDSTTIMARGYRQQLQAREGRNEAFYTGEYVNKSAVHGLKAKSGEHQVTLRWPADNGD-RFSAYIIERSNNGGLSFDTLTALPLMPQPLTIKETSVEWEIVNSGKQESMFQYIDSLVNNYVPYTYRITGLDAFADSSDPVSVVS-MGKDLTPP----KNPQIHSGKYLKEEGVIRLSWRLQEVPDDFGDLAIYRSNDPDLPY 837
            G +QQ +Q      + L+ AD     A G+GL  +DK V+ GK+YVY +             +   T++     + L   +G +          +S +  +K ++G+    + W     + +FSAY +E+S +GG +F  L   P +  P              +GK   +++Y DSL  NY P  YR+ GL AF + S P  VV+  G D T P    K   +H     +  G +RLSW+  + P D     + +S D   P+
Sbjct:  127 GILQQQQQNNFRLMLALLLADEDPRHAAGMGLGYIDKNVQRGKRYVYAISA-----------ITDRTVLYSDTARTLITNDGPHP---------RSDMIEIKTEAGDRVAKISWNRALAETQFSAYYVEKSVDGGRTFRRLNKRPWLQPP--------------TGKFAQVYEYTDSLAQNYRPAQYRVIGLTAFGELSQPSPVVTAQGIDRTGPAAVSKLQALH-----QSGGRVRLSWQYPKPPGDLAGYVVAKSADSQGPF 351          
BLAST of mRNA_M-pyrifera_M_contig82870.19362.1 vs. uniprot
Match: A0A7V2ZIV9_9BACT (Uncharacterized protein n=1 Tax=Ignavibacterium album TaxID=591197 RepID=A0A7V2ZIV9_9BACT)

HSP 1 Score: 86.7 bits (213), Expect = 1.920e-15
Identity = 66/226 (29.20%), Postives = 108/226 (47.79%), Query Frame = 1
Query:  106 MTLMSADFSQLAADGLGLRLVDKQVEPGKKYVYWVELADSIARIPWQQLDSTTIMARGYRQQLQAREGRNEAFYTGEYVNKSAVHGLKAKSGEHQVTLRWPADNGDRFSAYIIERSNNGGLSFDTLTALPLMPQPLTIKETSVEWEIVNSGKQESMFQYIDSLVNNYVPYTYRITGLDAFADSSDPVSVVSMGKDLTPPKNPQIHSGKYLKEEGVIRLSWRLQEVP 783
            +TL++A+ S +A++GLGL  VDK V+  + Y Y +                       Y+  L + +          +  K A+  +KA   +  + + W  D   +FS Y +ERS +   SF  L   PL    LT+K T       +S  Q+S   +ID+ + NY PYTYR+  L  FAD      + +MG+D TPP+ P +    ++ ++ V R++W++ E P
Sbjct:  162 LTLVAANNSLIASEGLGLFYVDKNVKENETYSYRIYC--------------------NYKSNLYSFDTTYLKIKAESFDPKKALQQIKANENDGSIEVFWDTDI--QFSTYNVERSEDKK-SFKRLNDSPL----LTLKST-----FSDSLNQDS---FIDTTIINYKPYTYRVYALTVFADEILLGEITAMGRDRTPPEQPFVSQPTHIDDKKV-RITWQMAEPP 351          
BLAST of mRNA_M-pyrifera_M_contig82870.19362.1 vs. uniprot
Match: A0A832D2S5_9BACT (Uncharacterized protein n=1 Tax=Ignavibacterium album TaxID=591197 RepID=A0A832D2S5_9BACT)

HSP 1 Score: 85.5 bits (210), Expect = 4.720e-15
Identity = 71/233 (30.47%), Postives = 110/233 (47.21%), Query Frame = 1
Query:  106 MTLMSADFSQLAADGLGLRLVDKQVEPGKKYVYWVELADSIARIPWQQLDSTTIMARGYRQQLQAREGRNEAFYTGEYVNKSAVHGLKAKSGEHQVTLRWPADNGDRFSAYIIERSNNGGLSFDTLTALPLMPQPLTIKETSVEWEIVNSGKQESMFQYIDSLVNNYVPYTYRITGLDAFADSSDPVSVVSMGKDLTPPKNPQIHSGKYLKEEGVIRLSWRLQEVPDDFGDLA 804
            +TL++A+ S  AA+GLGL  VDK V   + Y Y +    S  +      D+T    +            NE F       K A   L A   E  + + W  D   +FS Y +ERS +   +F  L   PL    LT+K  + +   ++S        YID+ + NY PYTYR+  +  FAD      + +MG+D TPP+ P +    ++ EE  ++++W++ + P   GDLA
Sbjct:  161 LTLLAANNSLNAAEGLGLFYVDKDVRENETYSYRIY---SDYKTALYSFDTTYFTIK------------NEKFDP-----KKAYQKLSANENEGSIEIIWNTDL--QFSTYNVERSEDKK-TFKRLNDSPL----LTLKSAASDSLNIDS--------YIDTTIINYKPYTYRVYAMTVFADEILLGEITAMGRDRTPPEQPFLPQPSHI-EENKVKITWQMADPPA--GDLA 355          
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig82870.19362.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
UPI001992C3F72.270e-2127.51Fibronectin type III domain-containing protein n=1... [more]
A0A7V3CWT8_9BACT1.330e-2029.48Fibronectin type-III domain-containing protein (Fr... [more]
A0A357JEM7_9FLAO1.220e-1929.10Fibronectin type-III domain-containing protein n=1... [more]
A0A1S2VLP6_9BACT7.470e-1931.75Fibronectin type-III domain-containing protein n=1... [more]
UPI001F25C9831.360e-1829.14hypothetical protein n=1 Tax=Fulvivirga sp. W9P-11... [more]
A0A7G5GVI2_9BACT1.370e-1828.40Uncharacterized protein n=1 Tax=Spirosoma sp. KCTC... [more]
A0A0P1MWC9_9BACT2.500e-1829.54Uncharacterized protein n=2 Tax=Candidatus Krypton... [more]
UPI00159B89A41.120e-1727.65fibronectin type III domain-containing protein n=1... [more]
A0A7V2ZIV9_9BACT1.920e-1529.20Uncharacterized protein n=1 Tax=Ignavibacterium al... [more]
A0A832D2S5_9BACT4.720e-1530.47Uncharacterized protein n=1 Tax=Ignavibacterium al... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig82870contigM-pyrifera_M_contig82870:34..870 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-19
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Properties
Property NameValue
Taxonomic scopeBacteria
Seed ortholog score94.0
Seed ortholog evalue1.2e-16
Seed eggNOG ortholog1185876.BN8_01057
Hectar predicted targeting categoryother localisation
EggNOG free text desc.SPTR Fibronectin type III domain protein
EggNOG OGs47MWJ@768503,4NF53@976,COG4733@1,COG4733@2
COG Functional cat.S
Best tax levelCytophagia
Best eggNOG OGNA|NA|NA
Exons1
Model size837
Cds size837
Stop0
Start0
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622816735.525756-CDS-M-pyrifera_M_contig82870:33..8701622816735.525756-CDS-M-pyrifera_M_contig82870:33..870Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig82870 34..870 -
1692278147.6504264-CDS-M-pyrifera_M_contig82870:33..8701692278147.6504264-CDS-M-pyrifera_M_contig82870:33..870Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig82870 34..870 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig82870.19362.1prot_M-pyrifera_M_contig82870.19362.1Macrocystis pyrifera P11B4 malepolypeptideM-pyrifera_M_contig82870 34..870 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_M-pyrifera_M_contig82870.19362.1

>prot_M-pyrifera_M_contig82870.19362.1 ID=prot_M-pyrifera_M_contig82870.19362.1|Name=mRNA_M-pyrifera_M_contig82870.19362.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=279bp
DPYALVAAGATIGALEISDSVGFIQQAKQAQSIFGMTLMSADFSQLAADG
LGLRLVDKQVEPGKKYVYWVELADSIARIPWQQLDSTTIMARGYRQQLQA
REGRNEAFYTGEYVNKSAVHGLKAKSGEHQVTLRWPADNGDRFSAYIIER
SNNGGLSFDTLTALPLMPQPLTIKETSVEWEIVNSGKQESMFQYIDSLVN
NYVPYTYRITGLDAFADSSDPVSVVSMGKDLTPPKNPQIHSGKYLKEEGV
IRLSWRLQEVPDDFGDLAIYRSNDPDLPY
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mRNA from alignment at M-pyrifera_M_contig82870:34..870-

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_M-pyrifera_M_contig82870.19362.1 ID=mRNA_M-pyrifera_M_contig82870.19362.1|Name=mRNA_M-pyrifera_M_contig82870.19362.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=837bp|location=Sequence derived from alignment at M-pyrifera_M_contig82870:34..870- (Macrocystis pyrifera P11B4 male)
GATCCTTATGCTTTAGTCGCGGCAGGTGCTACAATAGGCGCGCTGGAAAT ATCCGACAGTGTAGGGTTCATTCAACAAGCCAAACAGGCACAATCTATAT TCGGGATGACATTGATGTCGGCTGATTTTTCACAACTGGCAGCTGATGGG TTAGGTTTACGTCTGGTAGACAAGCAGGTAGAGCCTGGAAAAAAATACGT TTACTGGGTAGAACTAGCCGATTCTATTGCAAGAATTCCCTGGCAGCAAC TGGACAGTACTACGATTATGGCCAGGGGATACCGGCAGCAGCTGCAGGCC AGAGAAGGGCGGAATGAGGCCTTTTATACGGGTGAATATGTGAATAAATC AGCCGTACACGGACTCAAAGCCAAGTCAGGTGAGCATCAGGTGACGCTTC GCTGGCCAGCAGACAATGGGGATAGGTTTAGTGCCTATATCATTGAGCGC AGCAATAATGGAGGGCTGAGTTTTGATACGTTGACGGCACTTCCGCTCAT GCCACAGCCTCTGACTATTAAGGAGACCTCTGTCGAGTGGGAAATAGTTA ATAGTGGAAAACAGGAAAGTATGTTCCAGTACATAGACTCTCTGGTCAAT AATTATGTACCCTATACTTATAGGATTACCGGTCTGGATGCTTTTGCTGA TTCTAGTGATCCCGTGTCTGTAGTCAGTATGGGAAAGGATTTGACCCCGC CAAAAAATCCGCAGATCCACTCTGGTAAGTACCTCAAAGAGGAAGGTGTT ATCAGACTGAGTTGGAGGTTGCAGGAGGTGCCTGATGATTTCGGGGACTT GGCCATTTATCGATCGAATGACCCGGATCTCCCCTAT
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Coding sequence (CDS) from alignment at M-pyrifera_M_contig82870:34..870-

>mRNA_M-pyrifera_M_contig82870.19362.1 ID=mRNA_M-pyrifera_M_contig82870.19362.1|Name=mRNA_M-pyrifera_M_contig82870.19362.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=1674bp|location=Sequence derived from alignment at M-pyrifera_M_contig82870:34..870- (Macrocystis pyrifera P11B4 male)
GATCCTTATGCTTTAGTCGCGGCAGGTGCTACAATAGGCGCGCTGGAAAT
ATCCGACAGTGTAGGGTTCATTCAACAAGCCAAACAGGCACAATCTATAT
TCGGGATGACATTGATGTCGGCTGATTTTTCACAACTGGCAGCTGATGGG
TTAGGTTTACGTCTGGTAGACAAGCAGGTAGAGCCTGGAAAAAAATACGT
TTACTGGGTAGAACTAGCCGATTCTATTGCAAGAATTCCCTGGCAGCAAC
TGGACAGTACTACGATTATGGCCAGGGGATACCGGCAGCAGCTGCAGGCC
AGAGAAGGGCGGAATGAGGCCTTTTATACGGGTGAATATGTGAATAAATC
AGCCGTACACGGACTCAAAGCCAAGTCAGGTGAGCATCAGGTGACGCTTC
GCTGGCCAGCAGACAATGGGGATAGGTTTAGTGCCTATATCATTGAGCGC
AGCAATAATGGAGGGCTGAGTTTTGATACGTTGACGGCACTTCCGCTCAT
GCCACAGCCTCTGACTATTAAGGAGACCTCTGTCGAGTGGGAAATAGTTA
ATAGTGGAAAACAGGAAAGTATGTTCCAGTACATAGACTCTCTGGTCAAT
AATTATGTACCCTATACTTATAGGATTACCGGTCTGGATGCTTTTGCTGA
TTCTAGTGATCCCGTGTCTGTAGTCAGTATGGGAAAGGATTTGACCCCGC
CAAAAAATCCGCAGATCCACTCTGGTAAGTACCTCAAAGAGGAAGGTGTT
ATCAGACTGAGTTGGAGGTTGCAGGAGGTGCCTGATGATTTCGGGGACTT
GGCCATTTATCGATCGAATGACCCGGATCTCCCCTATGATCCTTATGCTT
TAGTCGCGGCAGGTGCTACAATAGGCGCGCTGGAAATATCCGACAGTGTA
GGGTTCATTCAACAAGCCAAACAGGCACAATCTATATTCGGGATGACATT
GATGTCGGCTGATTTTTCACAACTGGCAGCTGATGGGTTAGGTTTACGTC
TGGTAGACAAGCAGGTAGAGCCTGGAAAAAAATACGTTTACTGGGTAGAA
CTAGCCGATTCTATTGCAAGAATTCCCTGGCAGCAACTGGACAGTACTAC
GATTATGGCCAGGGGATACCGGCAGCAGCTGCAGGCCAGAGAAGGGCGGA
ATGAGGCCTTTTATACGGGTGAATATGTGAATAAATCAGCCGTACACGGA
CTCAAAGCCAAGTCAGGTGAGCATCAGGTGACGCTTCGCTGGCCAGCAGA
CAATGGGGATAGGTTTAGTGCCTATATCATTGAGCGCAGCAATAATGGAG
GGCTGAGTTTTGATACGTTGACGGCACTTCCGCTCATGCCACAGCCTCTG
ACTATTAAGGAGACCTCTGTCGAGTGGGAAATAGTTAATAGTGGAAAACA
GGAAAGTATGTTCCAGTACATAGACTCTCTGGTCAATAATTATGTACCCT
ATACTTATAGGATTACCGGTCTGGATGCTTTTGCTGATTCTAGTGATCCC
GTGTCTGTAGTCAGTATGGGAAAGGATTTGACCCCGCCAAAAAATCCGCA
GATCCACTCTGGTAAGTACCTCAAAGAGGAAGGTGTTATCAGACTGAGTT
GGAGGTTGCAGGAGGTGCCTGATGATTTCGGGGACTTGGCCATTTATCGA
TCGAATGACCCGGATCTCCCCTAT
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