mRNA_M-pyrifera_M_contig82791.19346.1 (mRNA) Macrocystis pyrifera P11B4 male
Overview
Homology
BLAST of mRNA_M-pyrifera_M_contig82791.19346.1 vs. uniprot
Match: A0A7Y2DLC7_9ACTN (NADH-quinone oxidoreductase subunit N n=1 Tax=Acidimicrobiales bacterium TaxID=2201156 RepID=A0A7Y2DLC7_9ACTN) HSP 1 Score: 285 bits (729), Expect = 7.280e-90 Identity = 160/265 (60.38%), Postives = 190/265 (71.70%), Query Frame = 1 Query: 1 SAVPFHFWTPDVYQGAPTPIVAFMASAVKVAGFAALVRVFVVAFSERGGDWRPLVGALAIFSILLGSVMAIVQTDVKRMLAYSSISHAGFMLIGVHAAGSASGDVALAGGRSVLFYMLAYTIAVAGTFAVVTAVSGYGDSNTSLDAFKGLSGRSPVLAAMMVVLLFSQAGIPFTSGFFAKFRVIVAAADGEQYVMAGIAMLGSVIGAFLYLRIVVAMF-TDTGDAAAEGDEPETAVVVVEPKPAPTVLLAITLAVAGTLLLGIWP 792 SA PFH WTPDVYQGAPTPIV FMASAVKVAGFA RVF+ AF G DWRP+VGA+A+ SI++GS +AI Q +VKRMLAYSSISHAGF+LIG++AAGSA VA+ G RSVLFY+ AYT+ V G+F V T V GD L + GLS R P LA ++VVLLF+QAGIPFTSGF+AKF VI AA GE YV+AG AM+ +V+GA+LYL+++V+MF T D AA GDE A P AI AV TLL G+ P Sbjct: 241 SAAPFHLWTPDVYQGAPTPIVGFMASAVKVAGFAGFARVFLSAFMPVGADWRPVVGAMALLSIVIGSFLAIRQDNVKRMLAYSSISHAGFILIGLYAAGSADDGVAVLGSRSVLFYLAAYTVMVGGSFGVATLVGRRGDGAHDLSDYSGLSTRKPALAGLLVVLLFAQAGIPFTSGFWAKFGVIEAAVRGEHYVLAGAAMVAAVVGAYLYLKVIVSMFLAPTTDVAASGDEAALATADGSIALVPAATAAIAAAVVITLLWGVLP 505
BLAST of mRNA_M-pyrifera_M_contig82791.19346.1 vs. uniprot
Match: A0A7Y2NA89_9ACTN (NADH-quinone oxidoreductase subunit N n=1 Tax=Acidimicrobiales bacterium TaxID=2201156 RepID=A0A7Y2NA89_9ACTN) HSP 1 Score: 276 bits (707), Expect = 1.820e-86 Identity = 162/290 (55.86%), Postives = 200/290 (68.97%), Query Frame = 1 Query: 1 SAVPFHFWTPDVYQGAPTPIVAFMASAVKVAGFAALVRVFVVAFSERGGDWRPLVGALAIFSILLGSVMAIVQTDVKRMLAYSSISHAGFMLIGVHAAGSASGDVALAGGRSVLFYMLAYTIAVAGTFAVVTAVSGYGDSNTSLDAFKGLSGRSPVLAAMMVVLLFSQAGIPFTSGFFAKFRVIVAAADGEQYVMAGIAMLGSVIGAFLYLRIVVAMFTDTG----DAAAEGDE-----PETAVVVVEPKPA--PTVLLAITLAVAGTLLLGIWPAVIDTPLGDGARSLL 837 SA PFH WTPDVYQGAPTP+V FMASAVKV GFA L+RVF+ F G DWRP+VGA+A+ SI++GS +AI Q +VKRMLAYSSISHAGF+LIG+ AAGS + +VA G RSVLFY+ AYT+ V G+F VVT V G GD L + GL+ RSP+LA +VLLF+QAGIPFTSGF AKF VI AA E YV+AG+AM+ +V+GA+LYLRI+ MF G AA D P+ AV+ + + + P + AI +AVA TLL G P + L D A + L Sbjct: 240 SAAPFHLWTPDVYQGAPTPVVGFMASAVKVGGFAGLLRVFLAGFGRLGDDWRPVVGAMALLSIVIGSFLAIRQDNVKRMLAYSSISHAGFILIGLFAAGSRNAEVAQLGTRSVLFYLFAYTVMVVGSFGVVTLVGGRGDGKHDLSDYAGLAQRSPILAGFFLVLLFAQAGIPFTSGFLAKFGVIQAAVRDEAYVLAGVAMVAAVVGAYLYLRIIKTMFFSDGAHTVPVAAALDTNVEATPDGAVIAPDEQISLPPAAVAAILVAVAITLLWGFAPNIGGDILRDAAATFL 529
BLAST of mRNA_M-pyrifera_M_contig82791.19346.1 vs. uniprot
Match: A0A538CVX3_9ACTN (NADH-quinone oxidoreductase subunit N n=1 Tax=Actinomycetia bacterium TaxID=1883427 RepID=A0A538CVX3_9ACTN) HSP 1 Score: 244 bits (623), Expect = 6.360e-77 Identity = 149/280 (53.21%), Postives = 190/280 (67.86%), Query Frame = 1 Query: 1 SAVPFHFWTPDVYQGAPTPIVAFMASAVKVAGFAALVRVFVVAFSERGGDWRPLVGALAIFSILLGSVMAIVQTDVKRMLAYSSISHAGFMLIGVHAAGSASGDVALAGGRSVLFYMLAYTIAVAGTFAVVTAVSGYGDSNTSLDAFKGLSGRSPVLAAMMVVLLFSQAGIPFTSGFFAKFRVIVAAADGEQYVMAGIAMLGSVIGAFLYLRIVVAMFTDTGDAAAEGDEPETAVVVVEPKPAPTVL-LAITLAVAGTLLLGIWPAVIDTPLGDGARSLL 837 +AVPFH W+PDVYQGAPTP VAFMA+AVK A FAAL+RVFV F+ DW+P V ALA+ ++L+GS +A+VQTDVKRMLAYSSISHAGF+L+GV AA SA G S LFY+ AYT V GTF VVT V GD+ SL ++GL R PVLA +LL +QAG+P T+GFFAKF VI AA D Y +A +AM+ SVI AFLYLRIV+AM+ G+A A+ D P A+ P++ +AI +AV T++ G P +++ D ++L Sbjct: 18 AAVPFHSWSPDVYQGAPTPAVAFMAAAVKAASFAALLRVFVAGFALYSDDWQPAVYALAVVTLLVGSTIAVVQTDVKRMLAYSSISHAGFILVGVEAA-SAKGTA------SCLFYLAAYTFMVIGTFGVVTLVGRTGDARHSLTDYRGLGSRRPVLAFAFTLLLLAQAGVPLTTGFFAKFYVISAAIDVHSYWLAIVAMVASVIAAFLYLRIVLAMYA--GEAEAD-DAPRVAI--------PSLAGVAIVIAVGVTVVFGFLPQILEHWARDAVPAIL 279
BLAST of mRNA_M-pyrifera_M_contig82791.19346.1 vs. uniprot
Match: A0A2D6M3C6_9PROT (NADH-quinone oxidoreductase subunit N n=5 Tax=root TaxID=1 RepID=A0A2D6M3C6_9PROT) HSP 1 Score: 250 bits (638), Expect = 1.560e-76 Identity = 145/276 (52.54%), Postives = 184/276 (66.67%), Query Frame = 1 Query: 1 SAVPFHFWTPDVYQGAPTPIVAFMASAVKVAGFAALVRVFVVAFSERGGDWRPLVGALAIFSILLGSVMAIVQTDVKRMLAYSSISHAGFMLIGVHAAGSASGDVALAGGRSVLFYMLAYTIAVAGTFAVVTAVSGYGDSNTSLDAFKGLSGRSPVLAAMMVVLLFSQAGIPFTSGFFAKFRVIVAAADGEQYVMAGIAMLGSVIGAFLYLRIVVAMFTDTGDAAAEGDEPETAVVVVEPKPAPTVLLAITLAVAGTLLLGIWPAVIDTPLGDGAR 828 +AVPFH W PDVYQGAPTP+VA+MA+ VK AGFAAL+RVFV+ F G+W+P V LAI ++L GS++A+VQTDVKRMLAYSSI+HAGF+L+GV AA G +VL Y+ AYT+ G+FAVVT V G GD LDA++GL R P LA VLL QAG+PFT+GF AKF VI AAA+G Y +AG+AM+ + + AF+YLRI+VAM+ + G G E +T P+ + IT +VA L LG+ P PL D AR Sbjct: 234 AAVPFHAWAPDVYQGAPTPVVAWMAAGVKAAGFAALLRVFVLTFGSWSGEWQPAVWGLAILTVLGGSIVAVVQTDVKRMLAYSSIAHAGFLLVGVQAASDR-------GTAAVLAYLGAYTLLACGSFAVVTVVGGTGDDRHGLDAYRGLGARRPWLAGAFAVLLLGQAGVPFTAGFVAKFGVIAAAAEGRSYALAGVAMVAAAVAAFVYLRILVAMYIEDG-----GPEDDTDATPWGPR------IVITASVALVLFLGVVPG----PLVDLAR 487
BLAST of mRNA_M-pyrifera_M_contig82791.19346.1 vs. uniprot
Match: A0A6G2KL54_9ACTN (NADH-quinone oxidoreductase subunit N n=3 Tax=Acidimicrobiia bacterium TaxID=2080302 RepID=A0A6G2KL54_9ACTN) HSP 1 Score: 250 bits (638), Expect = 1.720e-76 Identity = 148/264 (56.06%), Postives = 183/264 (69.32%), Query Frame = 1 Query: 1 SAVPFHFWTPDVYQGAPTPIVAFMASAVKVAGFAALVRVFVVAFSERGGDWRPLVGALAIFSILLGSVMAIVQTDVKRMLAYSSISHAGFMLIGVHAAGSASGDVALAGGRSVLFYMLAYTIAVAGTFAVVTAVSGYGDSNTSLDAFKGLSGRSPVLAAMMVVLLFSQAGIPFTSGFFAKFRVIVAAADGEQYVMAGIAMLGSVIGAFLYLRIVVAMFTDTGDAAAEGDEPETAVVVVEPKPAPTVLLAITLAVAGTLLLGIWP 792 +AVPFH WTPDVYQGAP+P+V++MA+ VK AGFAA++RVF F DW+P+V LAI S+ +GS++AIVQTDVKR+LAYSSISHAGF+L+GV AA + D G SVLFY+ AY G+FAV+T VSG GD T LD+ +GL+ R P+LAA VLL SQAGIPFT GF+AKF VI AA D + +A IAML +V+ AFLYLRIVVAMF D D P+ + + PA LAIT+ V TL GI+P Sbjct: 235 AAVPFHAWTPDVYQGAPSPVVSYMAAGVKAAGFAAMLRVFFGGFGGLADDWQPVVFGLAIASLAVGSMLAIVQTDVKRILAYSSISHAGFILVGVQAA---TDD----GVASVLFYLAAYAAMAIGSFAVITLVSGPGDEGTGLDSLRGLAARHPLLAAAFTVLLLSQAGIPFTVGFWAKFEVITAAVDARSFWLAVIAMLAAVVAAFLYLRIVVAMFLDAPD-------PDAPRLRIPRGPA----LAITIVVLFTLAFGIYP 480
BLAST of mRNA_M-pyrifera_M_contig82791.19346.1 vs. uniprot
Match: A0A2E8LIT1_9ACTN (NADH-quinone oxidoreductase subunit N n=1 Tax=Acidimicrobiaceae bacterium TaxID=2024894 RepID=A0A2E8LIT1_9ACTN) HSP 1 Score: 249 bits (637), Expect = 2.430e-76 Identity = 146/276 (52.90%), Postives = 185/276 (67.03%), Query Frame = 1 Query: 1 SAVPFHFWTPDVYQGAPTPIVAFMASAVKVAGFAALVRVFVVAFSERGGDWRPLVGALAIFSILLGSVMAIVQTDVKRMLAYSSISHAGFMLIGVHAAGSASGDVALAGGRSVLFYMLAYTIAVAGTFAVVTAVSGYGDSNTSLDAFKGLSGRSPVLAAMMVVLLFSQAGIPFTSGFFAKFRVIVAAADGEQYVMAGIAMLGSVIGAFLYLRIVVAMFTDTGDAAAEGDEPETAVVVVEPKPAPTVLLAITLAVAGTLLLGIWPAVIDTPLGDGAR 828 +AVPFH WTPDVYQGAPTP+VA+MA+ VK AGFAAL+RVFV+ F G+W P V LA+ ++L GSV+A+VQ DVKRMLAYSSI+HAGF+L+GV A+ G +VL Y+ AYT+ G+FAV+T V G GD LDA++GL+ R P LA VLL QAG+PFT+GF AKF VI AA +GE Y +AG+AML + + AF+YLRI+VAM+ + +GD E A V P L IT+AV L+LG+ P PL D AR Sbjct: 234 AAVPFHAWTPDVYQGAPTPVVAWMAAGVKAAGFAALLRVFVLTFGSWSGEWGPAVWGLAVLTVLGGSVVAVVQVDVKRMLAYSSIAHAGFLLVGVQASSER-------GTAAVLAYLGAYTLLACGSFAVLTVVGGTGDDRHGLDAYRGLAARRPWLAGAFAVLLLGQAGVPFTAGFVAKFGVIAAAVEGESYWLAGVAMLAAAVAAFVYLRIIVAMYLE-----GDGDHEEAAAEVEAAPWGPR--LVITVAVLLVLVLGVVPG----PLVDLAR 491
BLAST of mRNA_M-pyrifera_M_contig82791.19346.1 vs. uniprot
Match: A0A3N5KNM5_9ACTN (NADH-quinone oxidoreductase subunit N (Fragment) n=1 Tax=Actinomycetia bacterium TaxID=1883427 RepID=A0A3N5KNM5_9ACTN) HSP 1 Score: 245 bits (626), Expect = 3.570e-76 Identity = 136/236 (57.63%), Postives = 165/236 (69.92%), Query Frame = 1 Query: 1 SAVPFHFWTPDVYQGAPTPIVAFMASAVKVAGFAALVRVFVVAFSERGGDWRPLVGALAIFSILLGSVMAIVQTDVKRMLAYSSISHAGFMLIGVHAAGSASGDVALAGGRSVLFYMLAYTIAVAGTFAVVTAVSGYGDSNTSLDAFKGLSGRSPVLAAMMVVLLFSQAGIPFTSGFFAKFRVIVAAADGEQYVMAGIAMLGSVIGAFLYLRIVVAMF-TDTGDAAAEGDEPETAV 705 +AVPFH W PDVYQG+PTP+ FMAS K AGFAAL+RVFVVAF DW+P+V ALA+ ++++GSV+A+VQTDVKRMLAYSSISHAGF+L+GV AA G + LFY+LAYT V G+FA+V V GDSN L FKGLS R P LA V L +QAG+P TSGFFAKF VI AA D E Y +A IAM+ +VI AFLYLR++V M+ ++ D A E P V Sbjct: 106 AAVPFHTWVPDVYQGSPTPVTGFMASVAKAAGFAALLRVFVVAFETYELDWKPMVWALAVLTMVVGSVLAVVQTDVKRMLAYSSISHAGFVLVGVQAASEL-------GTGAALFYLLAYTFMVLGSFAIVALVGPPGDSNHDLSTFKGLSRRQPALAFAFTVFLLAQAGVPLTSGFFAKFYVIDAAVDAESYALAVIAMVSAVIAAFLYLRVIVVMYLSEPEDGAVEPAGPRVRV 334
BLAST of mRNA_M-pyrifera_M_contig82791.19346.1 vs. uniprot
Match: A0A6I3HJG8_9ACTN (NADH-quinone oxidoreductase subunit N n=3 Tax=root TaxID=1 RepID=A0A6I3HJG8_9ACTN) HSP 1 Score: 248 bits (633), Expect = 8.910e-76 Identity = 139/264 (52.65%), Postives = 187/264 (70.83%), Query Frame = 1 Query: 1 SAVPFHFWTPDVYQGAPTPIVAFMASAVKVAGFAALVRVFVVAFSERGGDWRPLVGALAIFSILLGSVMAIVQTDVKRMLAYSSISHAGFMLIGVHAAGSASGDVALAGGRSVLFYMLAYTIAVAGTFAVVTAVSGYGDSNTSLDAFKGLSGRSPVLAAMMVVLLFSQAGIPFTSGFFAKFRVIVAAADGEQYVMAGIAMLGSVIGAFLYLRIVVAMFTDTGDAAAEGDEPETAVVVVEPKPAPTVLLAITLAVAGTLLLGIWP 792 SA PFH WTPDVY+GAPTP+ AFMAS KVA FAAL+RV +V +R DWRP+V ALA+ ++ +GS++A+VQT+VKRMLAYSSISHAGF+L+GV AAG SGD G S + Y+ YT+ V G+FA+V A+SG D T+L FKGL+ R P LA VLLF+QAG+P T+GF AKF VI +A + + YV+A AM+ +VIGA+LYLRI V+M+ + + +E + + V+P V++ I LAV TL++G++P Sbjct: 235 SAAPFHIWTPDVYEGAPTPVTAFMASVGKVAAFAALMRVLMVGLEQRADDWRPVVWALALLTVFVGSILAVVQTNVKRMLAYSSISHAGFILVGVEAAGHMSGD----GIASSMNYLAIYTVLVMGSFAIVLAMSGNSDGETNLSDFKGLAKRRPALALAFTVLLFAQAGVPLTAGFVAKFAVIKSAVEVDSYVLAVAAMVAAVIGAYLYLRIAVSMWLE--EPVSENE------ISVDP----AVVVVIALAVVATLVVGLFP 482
BLAST of mRNA_M-pyrifera_M_contig82791.19346.1 vs. uniprot
Match: A0A6I2X8I2_9ACTN (NADH-quinone oxidoreductase subunit N n=2 Tax=root TaxID=1 RepID=A0A6I2X8I2_9ACTN) HSP 1 Score: 247 bits (631), Expect = 2.060e-75 Identity = 146/267 (54.68%), Postives = 184/267 (68.91%), Query Frame = 1 Query: 1 SAVPFHFWTPDVYQGAPTPIVAFMASAVKVAGFAALVRVFVVAFSERGGDWRPLVGALAIFSILLGSVMAIVQTDVKRMLAYSSISHAGFMLIGVHAAGSASGDVALAGGRSVLFYMLAYTIAVAGTFAVVTAVSGYGDSNTSLDAFKGLSGRSPVLAAMMVVLLFSQAGIPFTSGFFAKFRVIVAAADGEQYVMAGIAMLGSVIGAFLYLRIVVAMFTDTGDAAAEGDEPETAVVVVEPKPAPTVLLAITLAVAGTLLLGIWPAVI 801 S VPFH WTPDVYQGAPTP+ A M S KVA F+AL+RVF++A R DWRP + LA+ ++++GS++A+VQTDVKRMLAYSSISHAGF+L+G+ AA + G S + Y+ Y+I V GTFAVV+ V+G GD+ TSLDAFKGL + PVLA M VLL +QAG+P TSGF AKF +I AA E Y +A AML +VI AFLYLRI+V+M+ D + A VVV +V LAITLAV TLL+GI P ++ Sbjct: 240 SLVPFHVWTPDVYQGAPTPVTALMGSVGKVAAFSALIRVFMIALPSRIDDWRPAILVLALLTLVVGSLLAVVQTDVKRMLAYSSISHAGFILVGLEAAAHIGHADSHLGISSAMGYLFIYSILVIGTFAVVSVVAGAGDAATSLDAFKGLGKKRPVLALGMTVLLLAQAGVPLTSGFVAKFGIIRAAVSVESYALAVAAMLAAVIAAFLYLRIMVSMWLS--------DPADDAPVVVSK----SVGLAITLAVVATLLIGILPGLL 494
BLAST of mRNA_M-pyrifera_M_contig82791.19346.1 vs. uniprot
Match: A0A6I2WWG2_9ACTN (NADH-quinone oxidoreductase subunit N n=4 Tax=root TaxID=1 RepID=A0A6I2WWG2_9ACTN) HSP 1 Score: 247 bits (631), Expect = 2.580e-75 Identity = 134/229 (58.52%), Postives = 166/229 (72.49%), Query Frame = 1 Query: 1 SAVPFHFWTPDVYQGAPTPIVAFMASAVKVAGFAALVRVFVVAFSERGGDWRPLVGALAIFSILLGSVMAIVQTDVKRMLAYSSISHAGFMLIGVHAA--GSASGDVALAGGRSVLFYMLAYTIAVAGTFAVVTAVSGYGDSNTSLDAFKGLSGRSPVLAAMMVVLLFSQAGIPFTSGFFAKFRVIVAAADGEQYVMAGIAMLGSVIGAFLYLRIVVAMFTDTGDAAAE 681 +AVPFH WTPDVYQGAPTP+ FMASA K A F AL+R V++ E DWRP + LAI ++++GS +A+VQT+VKRMLAYSSISHAGF+L+G+ AA G SGD +A SVLFY+L Y + V+GTFAV T V GD LD+++GL + PVLA + V L +QAG+P TSGF AKF VI AAAD Y +A IAML +VIGAFLYLRI+V+MF + GDA E Sbjct: 246 AAVPFHSWTPDVYQGAPTPVTGFMASAAKAAAFGALLRSVVLSMPELRDDWRPAIWVLAILTLVIGSTLAVVQTNVKRMLAYSSISHAGFILVGIEAAAHGGESGDRGIA---SVLFYLLTYAVLVSGTFAVSTLVGRSGDGAHGLDSYRGLGRQRPVLALTLTVFLLAQAGVPLTSGFVAKFSVITAAADASSYAIAIIAMLAAVIGAFLYLRIIVSMFLEDGDAEGE 471 The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig82791.19346.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_M-pyrifera_M_contig82791.19346.1 >prot_M-pyrifera_M_contig82791.19346.1 ID=prot_M-pyrifera_M_contig82791.19346.1|Name=mRNA_M-pyrifera_M_contig82791.19346.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=281bp SAVPFHFWTPDVYQGAPTPIVAFMASAVKVAGFAALVRVFVVAFSERGGDback to top mRNA from alignment at M-pyrifera_M_contig82791:2..844+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_M-pyrifera_M_contig82791.19346.1 ID=mRNA_M-pyrifera_M_contig82791.19346.1|Name=mRNA_M-pyrifera_M_contig82791.19346.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=843bp|location=Sequence derived from alignment at M-pyrifera_M_contig82791:2..844+ (Macrocystis pyrifera P11B4 male)back to top Coding sequence (CDS) from alignment at M-pyrifera_M_contig82791:2..844+ >mRNA_M-pyrifera_M_contig82791.19346.1 ID=mRNA_M-pyrifera_M_contig82791.19346.1|Name=mRNA_M-pyrifera_M_contig82791.19346.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=1686bp|location=Sequence derived from alignment at M-pyrifera_M_contig82791:2..844+ (Macrocystis pyrifera P11B4 male)back to top |