mRNA_M-pyrifera_M_contig82663.19321.1 (mRNA) Macrocystis pyrifera P11B4 male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_M-pyrifera_M_contig82663.19321.1
Unique NamemRNA_M-pyrifera_M_contig82663.19321.1
TypemRNA
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Homology
BLAST of mRNA_M-pyrifera_M_contig82663.19321.1 vs. uniprot
Match: A0A6H5KU09_9PHAE (Peroxin-7 n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KU09_9PHAE)

HSP 1 Score: 123 bits (308), Expect = 1.050e-31
Identity = 62/108 (57.41%), Postives = 71/108 (65.74%), Query Frame = 1
Query:   43 REPLSLMSGHRYAVRRLRYSPHRPAVFATASYDMSVILWDSEANP---------------GGGMEKRGQGLALERCLEHTEFVAGVAFSLLEPPIMATCALDRRLCFW 321
            R PLS+M  HRYAV+RLR+SPH+  V ATASYD SVILWD++  P               GGG   R     L+RC+ HTEFVAGVAFSL EP +MATCA DRRLC W
Sbjct:  237 RVPLSVMLEHRYAVKRLRFSPHQSGVLATASYDTSVILWDTKITPPPAGTGMFPLAGEGRGGGGHGRRSPRLLDRCVGHTEFVAGVAFSLFEPRLMATCAWDRRLCLW 344          
BLAST of mRNA_M-pyrifera_M_contig82663.19321.1 vs. uniprot
Match: A0A077R5K9_9BASI (Peroxin-7 n=1 Tax=Melanopsichium pennsylvanicum 4 TaxID=1398559 RepID=A0A077R5K9_9BASI)

HSP 1 Score: 84.0 bits (206), Expect = 6.880e-17
Identity = 43/106 (40.57%), Postives = 66/106 (62.26%), Query Frame = 1
Query:   34 VTLREPLSLMSGHRYAVRRLRYSPHRPAVFATASYDMSVILWDSEANP--GGGMEKRGQ-------GLALERCLE-HTEFVAGVAFSLLEPPIMATCALDRRLCFW 321
            V L  P++ + GH YAVR++ YSPH P++ A+ASYDM+  +WD++A    GGG +  G        G +L +  + HTEFV GV++SL +  ++A+CA D  +  W
Sbjct:  249 VELGTPIAAILGHEYAVRKVAYSPHSPSMLASASYDMTSRIWDTDAAALQGGGTQAGGAMMGGVGGGTSLRKIHDAHTEFVVGVSWSLFQEGLVASCAWDSEVHLW 354          
BLAST of mRNA_M-pyrifera_M_contig82663.19321.1 vs. uniprot
Match: A0A0K3CGN7_RHOTO (Peroxin-7 n=4 Tax=Rhodosporidium toruloides TaxID=5286 RepID=A0A0K3CGN7_RHOTO)

HSP 1 Score: 82.4 bits (202), Expect = 2.840e-16
Identity = 41/96 (42.71%), Postives = 59/96 (61.46%), Query Frame = 1
Query:   52 LSLMSGHRYAVRRLRYSPHRPAVFATASYDMSVILWDSEANPGGGM-----EKRGQGLALERCLE-HTEFVAGVAFSLLEPPIMATCALDRRLCFW 321
            ++ + GH YAVRR+ +SPH  A+ AT SYDM+  +W   A  GGG       + G G  +ER  + HTEFV GVA+SL E  ++A+C+ D+ +  W
Sbjct:  279 IATLLGHEYAVRRVAWSPHSSALLATGSYDMTSRIWSVAAAGGGGQVGGFSAQGGMGARIERVWDRHTEFVVGVAWSLYEEGLVASCSWDQEVHLW 374          
BLAST of mRNA_M-pyrifera_M_contig82663.19321.1 vs. uniprot
Match: A0A1X2HEH7_SYNRA (Peroxin-7 n=1 Tax=Syncephalastrum racemosum TaxID=13706 RepID=A0A1X2HEH7_SYNRA)

HSP 1 Score: 79.3 bits (194), Expect = 2.440e-15
Identity = 40/87 (45.98%), Postives = 52/87 (59.77%), Query Frame = 1
Query:   52 LSLMSGHRYAVRRLRYSPHRPAVFATASYDMSVILWDSEANPGGGMEKRGQGLALERCLEHTEFVAGVAFSLLEPPIMATCALDRRL 312
            L+ ++GH YAVRR++ SPHRP + A+A YDMSV  WD+ A PG  M              HTEFV G+ F+L     +ATCA D R+
Sbjct:  227 LTCLAGHEYAVRRVKCSPHRPTIVASAGYDMSVRFWDTAAPPGQNMIMVHDA--------HTEFVLGLDFNLYAEGQIATCAWDERV 305          
BLAST of mRNA_M-pyrifera_M_contig82663.19321.1 vs. uniprot
Match: A0A4U7KKM2_9BASI (Peroxin-7 n=2 Tax=Sporisorium TaxID=63265 RepID=A0A4U7KKM2_9BASI)

HSP 1 Score: 79.3 bits (194), Expect = 3.270e-15
Identity = 38/97 (39.18%), Postives = 59/97 (60.82%), Query Frame = 1
Query:   49 PLSLMSGHRYAVRRLRYSPHRPAVFATASYDMSVILWDSEA----NPGGGMEKRGQGLALERCLE-HTEFVAGVAFSLLEPPIMATCALDRRLCFWS 324
            P + M GH YA+R++ +SPH P + A+ASYDM+  +WD++A     P G  +    G ++ +  E HTEFV GVA+SL +  ++A+ A D     W+
Sbjct:  255 PTAAMLGHEYAIRKVAFSPHAPPLLASASYDMTARIWDTDAAALGGPHGAQQLSQGGNSMRKIHETHTEFVVGVAWSLFQEGLVASTAWDSETHLWA 351          
BLAST of mRNA_M-pyrifera_M_contig82663.19321.1 vs. uniprot
Match: A0A5C3ER63_9BASI (Peroxin-7 n=2 Tax=Ustilago trichophora TaxID=86804 RepID=A0A5C3ER63_9BASI)

HSP 1 Score: 79.0 bits (193), Expect = 4.610e-15
Identity = 41/108 (37.96%), Postives = 64/108 (59.26%), Query Frame = 1
Query:   22 VTVTVTLREPLSLMSGHRYAVRRLRYSPHRPAVFATASYDMSVILWDSEA----NPGGGMEKRGQ---GLALERCLE-HTEFVAGVAFSLLEPPIMATCALDRRLCFW 321
            V   V L  P++ + GH YA+R++ YSPH P + A+ASYDM+  +WD++A     P G M++      G ++ +  + HTEFV GVA+SL +  ++A+ A D     W
Sbjct:  246 VAAPVELGTPMAAILGHEYAIRKVAYSPHSPQLLASASYDMTARVWDTDAAALNGPPGSMQQPSPAPAGSSMRKIHDAHTEFVVGVAWSLFQEGLVASTAWDSETHLW 353          
BLAST of mRNA_M-pyrifera_M_contig82663.19321.1 vs. uniprot
Match: A0A316YY66_9BASI (Peroxin-7 n=1 Tax=Acaromyces ingoldii TaxID=215250 RepID=A0A316YY66_9BASI)

HSP 1 Score: 79.0 bits (193), Expect = 5.760e-15
Identity = 40/93 (43.01%), Postives = 55/93 (59.14%), Query Frame = 1
Query:   55 SLMSGHRYAVRRLRYSPHRPAVFATASYDMSVILWDSEANP---GGGMEKRGQGLALERCLEHTEFVAGVAFSLLEPPIMATCALDRRLCFWS 324
            ++M GH YAVR++ +SPHRP V A+ASYDMS  +WD +A      G +   G          HTEFV G+A+SL +  ++ATCA D     W+
Sbjct:  307 AIMMGHEYAVRKVAWSPHRPNVLASASYDMSARVWDVDAGEKMAAGPLVGAGPRSLTAVHDAHTEFVVGLAWSLFQEGLVATCAWDCEAHLWA 399          
BLAST of mRNA_M-pyrifera_M_contig82663.19321.1 vs. uniprot
Match: N4VAC9_COLOR (Peroxin-7 n=31 Tax=Colletotrichum TaxID=5455 RepID=N4VAC9_COLOR)

HSP 1 Score: 78.6 bits (192), Expect = 6.720e-15
Identity = 44/98 (44.90%), Postives = 54/98 (55.10%), Query Frame = 1
Query:   49 PLSLMSGHRYAVRRLRYSPHRPAVFATASYDMSVILWDSEA------NPGGGMEKRGQGLALERCLEHTEFVAGVAFSLLEPP-IMATCALDRRLCFW 321
            P+S+M GH YAVRRL +SPH   +  TASYDM+V LWD  +      NPGGG      G  +     HTEFV GV + L      +ATC  D R+  W
Sbjct:  259 PVSVMQGHDYAVRRLAWSPHAGDLLLTASYDMTVRLWDDRSSAPPVQNPGGGGVGAQVGAQVGIMNRHTEFVVGVDWCLFGVGGWVATCGWDERVLLW 356          
BLAST of mRNA_M-pyrifera_M_contig82663.19321.1 vs. uniprot
Match: A0A317XJ83_9BASI (Peroxin-7 n=1 Tax=Testicularia cyperi TaxID=1882483 RepID=A0A317XJ83_9BASI)

HSP 1 Score: 77.8 bits (190), Expect = 1.240e-14
Identity = 40/102 (39.22%), Postives = 59/102 (57.84%), Query Frame = 1
Query:   31 TVTLREPLSLMSGHRYAVRRLRYSPHRPAVFATASYDMSVILWDSEA----NPGGGMEKRGQGLALERCLE-HTEFVAGVAFSLLEPPIMATCALDRRLCFW 321
            T T   PL+ M GH YA+RR+ +SPH P + ATASYDM+  +WD++A       G      Q  ++ R  + HTEFV G+++SL +  ++A+ A D     W
Sbjct:  254 TTTAATPLAAMLGHEYAIRRVAWSPHSPHLLATASYDMTARVWDTDAAARSTVSGLPGAAAQATSMRRVHDAHTEFVVGISWSLFQEGLVASTAWDCETHLW 355          
BLAST of mRNA_M-pyrifera_M_contig82663.19321.1 vs. uniprot
Match: A0A0P1BCH1_9BASI (Peroxin-7 n=2 Tax=Ceraceosorus TaxID=401624 RepID=A0A0P1BCH1_9BASI)

HSP 1 Score: 76.6 bits (187), Expect = 3.600e-14
Identity = 36/92 (39.13%), Postives = 52/92 (56.52%), Query Frame = 1
Query:   55 SLMSGHRYAVRRLRYSPHRPAVFATASYDMSVILWDSEANPG--GGMEKRGQGLALERCLEHTEFVAGVAFSLLEPPIMATCALDRRLCFWS 324
            +++ GH YAVRR+ +SPH  +   + SYDMS  +WD++       G     QG    R   HTEFV G+A+SL +  ++ATCA D     W+
Sbjct:  288 AVLMGHEYAVRRVAWSPHNASTLGSTSYDMSARIWDADVGAAIQAGPRIGAQGALRRRHDAHTEFVVGMAWSLFQQGVVATCAWDCETHLWA 379          
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig82663.19321.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5KU09_9PHAE1.050e-3157.41Peroxin-7 n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxI... [more]
A0A077R5K9_9BASI6.880e-1740.57Peroxin-7 n=1 Tax=Melanopsichium pennsylvanicum 4 ... [more]
A0A0K3CGN7_RHOTO2.840e-1642.71Peroxin-7 n=4 Tax=Rhodosporidium toruloides TaxID=... [more]
A0A1X2HEH7_SYNRA2.440e-1545.98Peroxin-7 n=1 Tax=Syncephalastrum racemosum TaxID=... [more]
A0A4U7KKM2_9BASI3.270e-1539.18Peroxin-7 n=2 Tax=Sporisorium TaxID=63265 RepID=A0... [more]
A0A5C3ER63_9BASI4.610e-1537.96Peroxin-7 n=2 Tax=Ustilago trichophora TaxID=86804... [more]
A0A316YY66_9BASI5.760e-1543.01Peroxin-7 n=1 Tax=Acaromyces ingoldii TaxID=215250... [more]
N4VAC9_COLOR6.720e-1544.90Peroxin-7 n=31 Tax=Colletotrichum TaxID=5455 RepID... [more]
A0A317XJ83_9BASI1.240e-1439.22Peroxin-7 n=1 Tax=Testicularia cyperi TaxID=188248... [more]
A0A0P1BCH1_9BASI3.600e-1439.13Peroxin-7 n=2 Tax=Ceraceosorus TaxID=401624 RepID=... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig82663contigM-pyrifera_M_contig82663:177..503 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-19
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Properties
Property NameValue
Taxonomic scopeFungi
Seed ortholog score82.4
Seed ortholog evalue1.4e-13
Seed eggNOG ortholog5286.M7X510
Preferred namePEX7
KEGG koko:K13341
KEGG TC3.A.20.1
KEGG Pathwayko04146,map04146
Hectar predicted targeting categorymitochondrion
GOsGO:0000268,GO:0003674,GO:0005048,GO:0005053,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005777,GO:0005782,GO:0005829,GO:0006605,GO:0006625,GO:0006810,GO:0006886,GO:0006996,GO:0007031,GO:0008104,GO:0008150,GO:0009987,GO:0015031,GO:0015833,GO:0015919,GO:0016043,GO:0016558,GO:0016560,GO:0017038,GO:0031907,GO:0031974,GO:0032991,GO:0033036,GO:0033218,GO:0033365,GO:0034613,GO:0042277,GO:0042579,GO:0042886,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043233,GO:0043574,GO:0044422,GO:0044424,GO:0044438,GO:0044439,GO:0044444,GO:0044446,GO:0044464,GO:0044743,GO:0045184,GO:0046907,GO:0051179,GO:0051234,GO:0051641,GO:0051649,GO:0055085,GO:0065002,GO:0070013,GO:0070727,GO:0071702,GO:0071705,GO:0071806,GO:0071840,GO:0072594,GO:0072662,GO:0072663
EggNOG free text desc.WD domain, G-beta repeat
EggNOG OGs2YCAU@29000,38BPW@33154,3NXHS@4751,3UYN9@5204,KOG0277@1,KOG0277@2759
COG Functional cat.U
Best tax levelPucciniomycotina
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001
Exons1
Model size327
Cds size327
Stop1
Start0
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622816733.4319835-CDS-M-pyrifera_M_contig82663:176..5031622816733.4319835-CDS-M-pyrifera_M_contig82663:176..503Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig82663 177..503 -
1692278146.4798455-CDS-M-pyrifera_M_contig82663:176..5031692278146.4798455-CDS-M-pyrifera_M_contig82663:176..503Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig82663 177..503 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig82663.19321.1prot_M-pyrifera_M_contig82663.19321.1Macrocystis pyrifera P11B4 malepolypeptideM-pyrifera_M_contig82663 177..503 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_M-pyrifera_M_contig82663.19321.1

>prot_M-pyrifera_M_contig82663.19321.1 ID=prot_M-pyrifera_M_contig82663.19321.1|Name=mRNA_M-pyrifera_M_contig82663.19321.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=109bp
LPSPTLTVTVTVTLREPLSLMSGHRYAVRRLRYSPHRPAVFATASYDMSV
ILWDSEANPGGGMEKRGQGLALERCLEHTEFVAGVAFSLLEPPIMATCAL
DRRLCFWS*
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mRNA from alignment at M-pyrifera_M_contig82663:177..503-

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_M-pyrifera_M_contig82663.19321.1 ID=mRNA_M-pyrifera_M_contig82663.19321.1|Name=mRNA_M-pyrifera_M_contig82663.19321.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=327bp|location=Sequence derived from alignment at M-pyrifera_M_contig82663:177..503- (Macrocystis pyrifera P11B4 male)
CTTCCATCCCCAACCCTAACCGTAACTGTAACCGTAACCCTCAGAGAGCC GCTGTCACTGATGTCGGGGCACCGGTATGCCGTGAGAAGACTCCGCTACT CGCCACACAGACCCGCCGTTTTCGCTACAGCTTCGTACGACATGAGCGTG ATATTGTGGGACTCGGAAGCGAATCCGGGGGGTGGGATGGAGAAGAGGGG GCAGGGACTGGCGCTAGAGAGATGTTTGGAGCACACGGAGTTCGTAGCGG GGGTGGCCTTCTCGTTGCTTGAGCCACCCATAATGGCGACGTGCGCGTTG GACCGCCGGTTGTGTTTTTGGTCTTGA
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Coding sequence (CDS) from alignment at M-pyrifera_M_contig82663:177..503-

>mRNA_M-pyrifera_M_contig82663.19321.1 ID=mRNA_M-pyrifera_M_contig82663.19321.1|Name=mRNA_M-pyrifera_M_contig82663.19321.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=654bp|location=Sequence derived from alignment at M-pyrifera_M_contig82663:177..503- (Macrocystis pyrifera P11B4 male)
CTTCCATCCCCAACCCTAACCGTAACTGTAACCGTAACCCTCAGAGAGCC
GCTGTCACTGATGTCGGGGCACCGGTATGCCGTGAGAAGACTCCGCTACT
CGCCACACAGACCCGCCGTTTTCGCTACAGCTTCGTACGACATGAGCGTG
ATATTGTGGGACTCGGAAGCGAATCCGGGGGGTGGGATGGAGAAGAGGGG
GCAGGGACTGGCGCTAGAGAGATGTTTGGAGCACACGGAGTTCGTAGCGG
GGGTGGCCTTCTCGTTGCTTGAGCCACCCATAATGGCGACGTGCGCGTTG
GACCGCCGGTTGTGTTTTTGGTCTTGACTTCCATCCCCAACCCTAACCGT
AACTGTAACCGTAACCCTCAGAGAGCCGCTGTCACTGATGTCGGGGCACC
GGTATGCCGTGAGAAGACTCCGCTACTCGCCACACAGACCCGCCGTTTTC
GCTACAGCTTCGTACGACATGAGCGTGATATTGTGGGACTCGGAAGCGAA
TCCGGGGGGTGGGATGGAGAAGAGGGGGCAGGGACTGGCGCTAGAGAGAT
GTTTGGAGCACACGGAGTTCGTAGCGGGGGTGGCCTTCTCGTTGCTTGAG
CCACCCATAATGGCGACGTGCGCGTTGGACCGCCGGTTGTGTTTTTGGTC
TTGA
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