mRNA_M-pyrifera_M_contig82637.19316.1 (mRNA) Macrocystis pyrifera P11B4 male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_M-pyrifera_M_contig82637.19316.1
Unique NamemRNA_M-pyrifera_M_contig82637.19316.1
TypemRNA
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Homology
BLAST of mRNA_M-pyrifera_M_contig82637.19316.1 vs. uniprot
Match: A0A2E7CYZ8_9PLAN (IS1 family transposase n=1 Tax=Planctomycetaceae bacterium TaxID=2026779 RepID=A0A2E7CYZ8_9PLAN)

HSP 1 Score: 392 bits (1006), Expect = 2.470e-133
Identity = 193/278 (69.42%), Postives = 224/278 (80.58%), Query Frame = 1
Query:    1 TFSDEHDPTGPLGTMRIDIDTACMAINLLLEGMSVRATERMTGVHRNTLCDLLLVVGERCEQFLSETIRDVEVKDVQADEIWSYIGMKEKTRKRKNRSEDFGDSWTWIAVERHTKLVLA----QRDGTDCQAFLNKMNRAVSGRFQMTTDGLGAYRYSVPFTFRSNVDYGMLIKHYQSNNTEKRYSPANIISIERARVFGNPDMENVCTSHVERLNLTLRMQMRRFTRLTNGFSKSLEHHMAMQNLFFAWYNFCRPHMGFQKKGQKVPPTTPAMASGL 822
            T+S+ +  T PLG MRID+D AC A+NLLLEGMS+RAT RMTG+ RNTL DLLL+VGERCE F    I+DVE  DVQADEIWS++GMKEKTRKR   SED GDSWTWIA+ER TKLVLA    QRDG DCQ F+NK+ RA++GRFQMTTDGLGAY+ +VPFTFRSNVD+ MLIK YQS   E RYSPANI++IE+  +FG+PD + +CTSHVERLNLTLRMQMRRF RLTNGFSK+L+HH AMQ+LFF WYNF RPH   + +  K    TPAMASGL
Sbjct:   80 TYSEANSSTAPLGKMRIDLDKACTALNLLLEGMSLRATSRMTGLSRNTLGDLLLIVGERCETFSRAMIKDVEATDVQADEIWSFVGMKEKTRKRIGASEDMGDSWTWIAIERDTKLVLAYHVGQRDGDDCQDFMNKLKRAITGRFQMTTDGLGAYQSTVPFTFRSNVDFAMLIKTYQSAQNETRYSPANIVAIEKKVMFGSPDEQQICTSHVERLNLTLRMQMRRFARLTNGFSKALDHHRAMQSLFFCWYNFVRPHQSLRTEDGKK--QTPAMASGL 355          
BLAST of mRNA_M-pyrifera_M_contig82637.19316.1 vs. uniprot
Match: A0A518J0Z9_9BACT (IS1 transposase n=4 Tax=Rosistilla TaxID=2795779 RepID=A0A518J0Z9_9BACT)

HSP 1 Score: 298 bits (762), Expect = 3.030e-97
Identity = 148/287 (51.57%), Postives = 203/287 (70.73%), Query Frame = 1
Query:   31 PLGTMRIDIDTACMAINLLLEGMSVRATERMTGVHRNTLCDLLLVVGERCEQFLSETIRDVEVKDVQADEIWSYIGMKEKTRKRKNRSED--FGDSWTWIAVERHTKLVLA----QRDGTDCQAFLNKMNRAVSGR--FQMTTDGLGAYRYSVPFTFRSNVDYGMLIKHYQSNNTEKRYSPANIISIERARVFGNPDMENVCTSHVERLNLTLRMQMRRFTRLTNGFSKSLEHHMAMQNLFFAWYNFCRPHMGFQKKGQKVPPTTPAMASGLASKPWTIKRLLSESA 867
            P+GTM+ID+D ACMA+++LLEGMS+RAT R+T + +NT+ +L+L  GE+C + L ++I  + V D+Q DEIW+++GMK++T   +N  +D   GD+WT+IAVER+TK+VLA    +RD  D   FL K+ RA+     FQ++TDGL  YRY VPF   SN ++GMLIK Y +   E RYSPA II  E+  VFG+PD +++CTSH+E LN  +RM +RRFTRLT G SKS+EHH+AMQN+FFAWYN+CR H   ++        TPAM  G+A   W+I+ LL  SA
Sbjct:   39 PIGTMQIDLDRACMALSMLLEGMSIRATARITNIDQNTIGNLILTAGEQCGRLL-DSISGISVTDIQIDEIWTFVGMKQRTANLRNLGDDSSVGDNWTYIAVERYTKMVLAHHVGRRDTNDTNVFLGKVRRAIDASLPFQVSTDGLSNYRYGVPFALGSNANFGMLIKKYAAQQQETRYSPAAIIGTEKKAVFGSPDPDSICTSHIETLNQKIRMHLRRFTRLTAGHSKSVEHHVAMQNIFFAWYNWCRKHHTLRQ--------TPAMECGIAMTKWSIRELLESSA 316          
BLAST of mRNA_M-pyrifera_M_contig82637.19316.1 vs. uniprot
Match: A0A5B9QLA6_9BACT (IS1 transposase n=1 Tax=Bythopirellula goksoeyrii TaxID=1400387 RepID=A0A5B9QLA6_9BACT)

HSP 1 Score: 293 bits (750), Expect = 1.750e-95
Identity = 150/287 (52.26%), Postives = 197/287 (68.64%), Query Frame = 1
Query:   19 DPTGPLGTMRIDIDTACMAINLLLEGMSVRATERMTGVHRNTLCDLLLVVGERCEQFLSETIRDVEVKDVQADEIWSYIGMKEKTRKRKNRSEDFGDSWTWIAVERHTKLVLA----QRDGTDCQAFLNKMNRAVSGRFQMTTDGLGAYRYSVPFTFRSNVDYGMLIKHYQSNNTEKRYSPANIISIERARVFGNPDMENVCTSHVERLNLTLRMQMRRFTRLTNGFSKSLEHHMAMQNLFFAWYNFCRPHMGFQKKGQKVPPTTPAMASGLASKPWTIKRLLSESA 867
            D T PLG MRID+D A +A+NLLLEGMSVRAT RMTG+   T+CDL+L VGE C+++L   I+ V+V+DV+ DEIWS++G K +T   K  +ED GDSWT +A+ER+TKLV+A    +RD T     L K+     GRFQ+++DGL +Y+ +VP+  R  VD+G++IK YQS     RYSPA II I++   FG PD + + TS VER NLT+RMQ RRFTRLTN  SKS +HH AMQ +F  WYN+ R H   ++        TPAMASGLA K W++K L+ + A
Sbjct:   35 DETRPLGDMRIDLDKAVVALNLLLEGMSVRATSRMTGMKIGTICDLILHVGENCQRYLDTKIQGVKVEDVEVDEIWSFVGCKNRTAADKGYNEDSGDSWTAVAIERNTKLVIAHQVGERDNTTICILLQKLADNTVGRFQLSSDGLASYKLNVPYMLRDRVDFGIIIKQYQSTQKSGRYSPAAIIGIKKRSEFGRPDRDRIGTSIVERFNLTMRMQNRRFTRLTNAHSKSRKHHAAMQAIFVMWYNYARKHETIKQ--------TPAMASGLAEKKWSVKDLVLQVA 313          
BLAST of mRNA_M-pyrifera_M_contig82637.19316.1 vs. uniprot
Match: A0A517YNJ7_9BACT (IS1 transposase n=1 Tax=Anatilimnocola aggregata TaxID=2528021 RepID=A0A517YNJ7_9BACT)

HSP 1 Score: 284 bits (726), Expect = 8.550e-92
Identity = 141/279 (50.54%), Postives = 191/279 (68.46%), Query Frame = 1
Query:   31 PLGTMRIDIDTACMAINLLLEGMSVRATERMTGVHRNTLCDLLLVVGERCEQFLSETIRDVEVKDVQADEIWSYIGMKEKTRKRKNRSEDFGDSWTWIAVERHTKLVLA----QRDGTDCQAFLNKMNRAVSGRFQMTTDGLGAYRYSVPFTFRSNVDYGMLIKHYQSNNTEKRYSPANIISIERARVFGNPDMENVCTSHVERLNLTLRMQMRRFTRLTNGFSKSLEHHMAMQNLFFAWYNFCRPHMGFQKKGQKVPPTTPAMASGLASKPWTIKRLL 855
            PLG MR+++D A   + +LLEGMS+RA ER+TGV+R+T+CDL+L VG+ C++FL + IR V+ K ++ DEIWS++G K K    K  SE+ GDSWTW+A++  +KL+L+    +RD   C AFL+++NRA  GR Q+T+DG   Y + VP    S VD+  +IK Y S+ +E RYSPA I +IE+   FGNPD  ++ TS+ ERLNL++RM  RRFTRLTN  SKS EHH A  +LF A+YN+CR H    K  Q     TPAMA+GL    W+IK LL
Sbjct:   40 PLGNMRLEMDKAVAVLKMLLEGMSIRACERITGVNRDTICDLVLHVGQNCDRFLKDGIRGVKAKYIELDEIWSFVGCKAKAAVGKENSEEMGDSWTWLAIDADSKLILSHAVGKRDVNTCDAFLSQLNRATVGRTQVTSDGFSTYTHGVPMHMGSRVDFAQIIKSYSSSQSETRYSPATISNIEKVPRFGNPDEAHISTSYSERLNLSVRMHNRRFTRLTNAHSKSAEHHSAAVSLFVAFYNYCRKHESCGKGKQ-----TPAMAAGLTDHVWSIKELL 313          
BLAST of mRNA_M-pyrifera_M_contig82637.19316.1 vs. uniprot
Match: A0A517YNJ2_9BACT (IS1 transposase n=1 Tax=Anatilimnocola aggregata TaxID=2528021 RepID=A0A517YNJ2_9BACT)

HSP 1 Score: 274 bits (700), Expect = 7.320e-88
Identity = 136/288 (47.22%), Postives = 186/288 (64.58%), Query Frame = 1
Query:   16 HDPTGPLGTMRIDIDTACMAINLLLEGMSVRATERMTGVHRNTLCDLLLVVGERCEQFLSETIRDVEVKDVQADEIWSYIGMKEKTRKRKNRSEDFGDSWTWIAVERHTKLVLAQRDGTDCQA----FLNKMNRAVSGRFQMTTDGLGAYRYSVPFTFRSNVDYGMLIKHYQSNNTEKRYSPANIISIERARVFGNPDMENVCTSHVERLNLTLRMQMRRFTRLTNGFSKSLEHHMAMQNLFFAWYNFCRPHMGFQKKGQKVPPTTPAMASGLASKPWTIKRLLSESA 867
            H+   PLG MR+++  A + + LLLEGMS+RA ER+T V+R+T+CDL+L +G++C+ FL  T++ V+ K ++ DEIW++ G K KT K KN   + GD WTW A++  +K++L+ + G   Q     FL ++N A  GR Q+T+DG  AY Y VP    S VD+  LIKHY  +  E RYSPA I+  E    FGNPD  +V TS+ ERLNL++RM  RR TRLTN  SKS EHH AM ++F A+YN+CR H    K  Q     TPAMA+GL    W++K LL  +A
Sbjct:   36 HEGGKPLGNMRLEMAKAIIVLKLLLEGMSIRACERITSVNRDTICDLVLTLGQKCDTFLENTVQGVQAKYIELDEIWAFSGCKAKTAKEKNYGPEMGDVWTWFAIDAQSKMILSHKTGKRDQVTGDEFLRRLNNATVGRTQVTSDGFSAYTYGVPSAMGSRVDFAQLIKHYAGSQNETRYSPAQIVGTEVVPRFGNPDEAHVSTSYSERLNLSVRMHNRRLTRLTNAHSKSAEHHSAMLSIFTAFYNYCRKHESCGKGKQ-----TPAMAAGLTDHVWSVKELLEAAA 318          
BLAST of mRNA_M-pyrifera_M_contig82637.19316.1 vs. uniprot
Match: A0A517R7H7_9BACT (IS1 transposase n=1 Tax=Planctomycetes bacterium Pan189 TaxID=2527980 RepID=A0A517R7H7_9BACT)

HSP 1 Score: 273 bits (697), Expect = 1.310e-86
Identity = 141/287 (49.13%), Postives = 191/287 (66.55%), Query Frame = 1
Query:   31 PLGTMRIDIDTACMAINLLLEGMSVRATERMTGVHRNTLCDLLLVVGERCEQFLSETIRDVEVKDVQADEIWSYIGMKEKTRKRKNRSEDFGDSWTWIAVERHTKLV----LAQRDGTDCQAFLNKMNRAVSGRFQMTTDGLGAYRYSVPFTFRSNVDYGMLIKHYQSN---NTEKRYSPANIISIERARVFGNPDMENVCTSHVERLNLTLRMQMRRFTRLTNGFSKSLEHHMAMQNLFFAWYNFCRPHMGFQKKGQKVPPTTPAMASGLASKPWTIKRLLSESAK 870
            PLG MRI++D A  A+NLLLEGMS+RA ERMT +HR+T+C L+  VG  C++FL   ++++  KDVQ DEIW ++G KEK  +R N     GD++T+IA+ER TKLV    + +R+     AF+ +++ A SG FQ++TDG   YR +V       VD+G+L+K Y ++   +  +RYSPA II IER    G P    VCTSH+ER NLTLRMQ RR TRLTNGFSK+ E H AM  ++FAWYNF R H   +        TTPA+A  L S+ W+++RLL+E+AK
Sbjct:   95 PLGDMRIEMDKAVFALNLLLEGMSIRAVERMTNLHRDTICSLVSTVGANCQKFLDNRMQNIPAKDVQCDEIWGFVGAKEKNARRLNHDPLNGDAYTFIAIERKTKLVYCYMIGKRNSDSTDAFIEQLDGATSGHFQLSTDGFHPYRTAVYSHLNGRVDHGVLVKKYGNDPNGDGPRRYSPAAIIGIERTAALGRPMKSKVCTSHIERSNLTLRMQCRRMTRLTNGFSKTWEQHDAMLAIYFAWYNFVRKHSTIK--------TTPAVAHKLESEQWSMERLLTEAAK 373          
BLAST of mRNA_M-pyrifera_M_contig82637.19316.1 vs. uniprot
Match: A0A3B9MIZ8_9BACT (IS1 family transposase n=1 Tax=Blastocatellia bacterium TaxID=2052146 RepID=A0A3B9MIZ8_9BACT)

HSP 1 Score: 259 bits (662), Expect = 3.350e-82
Identity = 136/291 (46.74%), Postives = 187/291 (64.26%), Query Frame = 1
Query:    1 TFSDEHDPTGPLGTMRIDIDTACMAINLLLEGMSVRATERMTGVHRNTLCDLLLVVGERCEQFLSETIRDVEVKDVQADEIWSYIGMKEKTRKRKN-RSEDFGDSWTWIAVERHTKLVLA----QRDGTDCQAFLNKMNRAVSGRFQMTTDGLGAYRYSVPFTFRSNVDYGMLIKHYQSNNTEKRYSPANIISIERARVFGNPDMENVCTSHVERLNLTLRMQMRRFTRLTNGFSKSLEHHMAMQNLFFAWYNFCRPHMGFQKKGQKVPPTTPAMASGLASKPWTIKRLLS 858
            TFS+  D   PLGTMR+ I+ A   + LL+EG+SVR+ ER+TGV + T+  LL  VGERCE  L   IR++ VKDVQ DE+W Y+ MKEKT+ RK   SE  GD++ ++A+ER +KL+L+    +R   D   F++K+++A  G+FQ+TTDG G YR ++ FT     D+  L+K Y     E RYSPA ++  ++    G PD + VCTSH+ER NLT+RMQMRR TRLTNGFSK  E+  A   L FA+YNFCR H   +         TPAM +G+  + W++  LL+
Sbjct:   31 TFSELQDR--PLGTMRLSIEKAIQVLQLLVEGVSVRSAERITGVEKKTILSLLGRVGERCEMLLENLIRELPVKDVQCDELWGYVQMKEKTKTRKALTSEKLGDAYCFVALERDSKLILSWHLGRRSAADTNLFIDKLDKATQGQFQITTDGFGPYRDAIGFTLGGRTDFAQLVKVYGEMQDEHRYSPATVLGAKKDWQHGRPDPDRVCTSHIERQNLTIRMQMRRLTRLTNGFSKKWENLKAAYALHFAYYNFCRIHSTIR--------CTPAMEAGITKRVWSMNDLLT 311          
BLAST of mRNA_M-pyrifera_M_contig82637.19316.1 vs. uniprot
Match: A0A3E0PWX1_9BACT (IS1 family transposase n=1 Tax=Planctomycetes bacterium TaxID=2026780 RepID=A0A3E0PWX1_9BACT)

HSP 1 Score: 256 bits (653), Expect = 9.230e-81
Identity = 133/300 (44.33%), Postives = 197/300 (65.67%), Query Frame = 1
Query:    1 TFSDEHDPTGPLGTMRIDIDTACMAINLLLEGMSVRATERMTGVHRNTLCDLLLVVGERCEQFLSETIRDVEVKDVQADEIWSYIGMKEKTRKRKNRSEDFGDSWTWIAVERHTKLV----LAQRDGTDCQAFLNKMNRAVSGRFQMTTDGLGAYRYSVPFTFRSNVDYGMLIKHYQSNNTE--KRYSPANIISIERARVFGNPDMENVCTSHVERLNLTLRMQMRRFTRLTNGFSKSLEHHMAMQNLFFAWYNFCRPHMGFQKKGQKVPPTTPAMASGLASKPWTIKRLLSESAKYAVA 882
            TFS+      PL  +  D+++A MA+ LLLEGMS+RAT R+T + ++T+  ++   G +C QF+++ I +    D+Q DE W ++GMKEKT   +  + D GD++T+ A++R +K+V    L +RD      F+ K+ R VSGR Q++TDG   Y  ++P T+R + DY  L+K Y S + +  +RYSPA II ++   V G+PD +++CTSHVER NLT RMQ+RR TRLTNGFSK  E+H AM  LF+AWYN+CR H   +        TTPA+++GL  +PW++++LL+ESAK   A
Sbjct:   31 TFSEPK----PLPGLATDLESAVMALRLLLEGMSIRATARITNLDKDTVQRIVETAGRQCCQFMADAIDNHPFGDIQIDEQWGFVGMKEKTAFFQGGAADAGDAYTFTAIDRDSKMVICFHLGKRDSDHTWEFVEKLYRCVSGRPQISTDGFRPYMQAIPLTWRFDCDYAQLVKKYGSPDQQGQRRYSPARIIGVDERAVCGSPDEDHICTSHVERHNLTTRMQVRRMTRLTNGFSKKWENHEAMLGLFYAWYNWCRKHSTLK--------TTPAVSAGLTDEPWSLEKLLTESAKVVAA 318          
BLAST of mRNA_M-pyrifera_M_contig82637.19316.1 vs. uniprot
Match: A0A7W0JJ73_9BACT (IS1/IS6 family transposase n=1 Tax=Acidobacteria bacterium TaxID=1978231 RepID=A0A7W0JJ73_9BACT)

HSP 1 Score: 255 bits (652), Expect = 1.230e-80
Identity = 137/286 (47.90%), Postives = 188/286 (65.73%), Query Frame = 1
Query:   31 PLGTMRIDIDTACMAINLLLEGMSVRATERMTGVHRNTLCDLLLVVGERCEQFLSETIRDVEVKDVQADEIWSYIGMKEKTRKRKNRS-EDFGDSWTWIAVERHTKLVLA----QRDGTDCQAFLNKMNRAVSG---RFQMTTDGLGAYRYSVPFTFRSNVDYGMLIKHYQSNNTEK-RYSPANIISIERARVFGNPDMENVCTSHVERLNLTLRMQMRRFTRLTNGFSKSLEHHMAMQNLFFAWYNFCRPHMGFQKKGQKVPPTTPAMASGLASKPWTIKRLLSE 861
            PL  MR+ +D A M + LL+EG SVR+TER+TGV +  +  LL+ VGE+CE+   + IR+++V DVQADEIW ++ MK+KTRKR+ +  E  GD++TWIA+E ++KL++A    +R+  D + FL K+ +AV G   RFQM+TDG GAY  +V +   + VDY  LIK Y +   +  RYSP+  I  +   V G+PDM  VCTSH+ER NLT+RM MRR TRLTNGFSK  ++  A   L FA+YNFCR H        K    TPAM +G+ +  W +K LL+E
Sbjct:   39 PLDEMRLPMDKALMVLQLLIEGCSVRSTERITGVGKTAILSLLVKVGEKCERLFEKHIRNIKVSDVQADEIWGFVQMKDKTRKRRGKDPEGLGDAYTWIAMESNSKLIIAWHLGKRESKDAEIFLEKIYKAVEGTSNRFQMSTDGYGAYPDAVSYNLGTRVDYAQLIKQYAAPEADDHRYSPSVCIGAKAVAVIGDPDMAKVCTSHIERQNLTVRMSMRRMTRLTNGFSKKWDNLRAALALNFAYYNFCRVH--------KTLRCTPAMEAGITNTIWELKDLLTE 316          
BLAST of mRNA_M-pyrifera_M_contig82637.19316.1 vs. uniprot
Match: A0A2V8S132_9BACT (IS1 family transposase n=1 Tax=Acidobacteria bacterium TaxID=1978231 RepID=A0A2V8S132_9BACT)

HSP 1 Score: 254 bits (650), Expect = 2.700e-80
Identity = 136/285 (47.72%), Postives = 185/285 (64.91%), Query Frame = 1
Query:   31 PLGTMRIDIDTACMAINLLLEGMSVRATERMTGVHRNTLCDLLLVVGERCEQFLSETIRDVEVKDVQADEIWSYIGMKEKTRKRKNRSED-FGDSWTWIAVERHTKLVLA----QRDGTDCQAFLNKMNRAVSG---RFQMTTDGLGAYRYSVPFTFRSNVDYGMLIKHYQSNNTEK-RYSPANIISIERARVFGNPDMENVCTSHVERLNLTLRMQMRRFTRLTNGFSKSLEHHMAMQNLFFAWYNFCRPHMGFQKKGQKVPPTTPAMASGLASKPWTIKRLLS 858
            PLG MR+ ID A M +NLL+EG S+R+TER+TGV +  +  LL+  GE+CE+   + +R+++V DVQADEIW ++ MK+KTRKR+ + E+  GD++TWIA+ER +KL+ A    +R   D + FL K+ +AV G   RFQMTTDG GAY  +V ++  + VDY  LIK Y +   +  RYSP+     +   V GNPD E +CTSH+ER NLT+RM MRR TRLTNGFSK   +  A   L FA+YNFCR H        K    TPAM + +  + W +K LL+
Sbjct:   42 PLGDMRLPIDKAVMILNLLIEGNSIRSTERITGVGKTAIIALLVKTGEKCERLFEKYMRNIKVNDVQADEIWGFVRMKDKTRKRRGKDEEGLGDAYTWIAMERDSKLIFAWHLGKRSAKDAEIFLEKIYKAVEGTNNRFQMTTDGYGAYPDAVSYSLGTRVDYAQLIKQYAAPEADDHRYSPSVCTGAKPVPVIGNPDPEKICTSHIERQNLTVRMSMRRMTRLTNGFSKKWSNLRAALALNFAYYNFCRMH--------KTIRCTPAMQANITKRVWELKDLLA 318          
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig82637.19316.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A2E7CYZ8_9PLAN2.470e-13369.42IS1 family transposase n=1 Tax=Planctomycetaceae b... [more]
A0A518J0Z9_9BACT3.030e-9751.57IS1 transposase n=4 Tax=Rosistilla TaxID=2795779 R... [more]
A0A5B9QLA6_9BACT1.750e-9552.26IS1 transposase n=1 Tax=Bythopirellula goksoeyrii ... [more]
A0A517YNJ7_9BACT8.550e-9250.54IS1 transposase n=1 Tax=Anatilimnocola aggregata T... [more]
A0A517YNJ2_9BACT7.320e-8847.22IS1 transposase n=1 Tax=Anatilimnocola aggregata T... [more]
A0A517R7H7_9BACT1.310e-8649.13IS1 transposase n=1 Tax=Planctomycetes bacterium P... [more]
A0A3B9MIZ8_9BACT3.350e-8246.74IS1 family transposase n=1 Tax=Blastocatellia bact... [more]
A0A3E0PWX1_9BACT9.230e-8144.33IS1 family transposase n=1 Tax=Planctomycetes bact... [more]
A0A7W0JJ73_9BACT1.230e-8047.90IS1/IS6 family transposase n=1 Tax=Acidobacteria b... [more]
A0A2V8S132_9BACT2.700e-8047.72IS1 family transposase n=1 Tax=Acidobacteria bacte... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig82637contigM-pyrifera_M_contig82637:5..892 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-19
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Properties
Property NameValue
Taxonomic scopeBacteria
Seed ortholog score203.4
Seed ortholog evalue1.5e-49
Seed eggNOG ortholog1304878.AUGD01000003_gene2573
KEGG koko:K07480
Hectar predicted targeting categoryother localisation
EggNOG free text desc.PFAM IS1 transposase
EggNOG OGs1MV8R@1224,2TURN@28211,3JZ9K@41294,COG1662@1,COG1662@2
COG Functional cat.L
Best tax levelBradyrhizobiaceae
Best eggNOG OGNA|NA|NA
BRITEko00000
Exons1
Model size888
Cds size888
Stop1
Start0
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622816733.139761-CDS-M-pyrifera_M_contig82637:4..8921622816733.139761-CDS-M-pyrifera_M_contig82637:4..892Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig82637 5..892 +
1692278146.3093116-CDS-M-pyrifera_M_contig82637:4..8921692278146.3093116-CDS-M-pyrifera_M_contig82637:4..892Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig82637 5..892 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig82637.19316.1prot_M-pyrifera_M_contig82637.19316.1Macrocystis pyrifera P11B4 malepolypeptideM-pyrifera_M_contig82637 5..892 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_M-pyrifera_M_contig82637.19316.1

>prot_M-pyrifera_M_contig82637.19316.1 ID=prot_M-pyrifera_M_contig82637.19316.1|Name=mRNA_M-pyrifera_M_contig82637.19316.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=296bp
TFSDEHDPTGPLGTMRIDIDTACMAINLLLEGMSVRATERMTGVHRNTLC
DLLLVVGERCEQFLSETIRDVEVKDVQADEIWSYIGMKEKTRKRKNRSED
FGDSWTWIAVERHTKLVLAQRDGTDCQAFLNKMNRAVSGRFQMTTDGLGA
YRYSVPFTFRSNVDYGMLIKHYQSNNTEKRYSPANIISIERARVFGNPDM
ENVCTSHVERLNLTLRMQMRRFTRLTNGFSKSLEHHMAMQNLFFAWYNFC
RPHMGFQKKGQKVPPTTPAMASGLASKPWTIKRLLSESAKYAVAT*
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mRNA from alignment at M-pyrifera_M_contig82637:5..892+

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_M-pyrifera_M_contig82637.19316.1 ID=mRNA_M-pyrifera_M_contig82637.19316.1|Name=mRNA_M-pyrifera_M_contig82637.19316.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=888bp|location=Sequence derived from alignment at M-pyrifera_M_contig82637:5..892+ (Macrocystis pyrifera P11B4 male)
ACGTTCTCTGACGAGCACGACCCCACCGGCCCACTCGGCACAATGCGGAT CGACATCGACACAGCCTGCATGGCGATCAACCTGTTGCTGGAAGGGATGA GCGTCCGAGCCACTGAGCGAATGACGGGCGTCCACCGCAACACGCTGTGC GACCTCCTGCTGGTCGTGGGCGAGCGATGTGAGCAGTTCCTGTCCGAGAC CATCCGCGACGTCGAGGTGAAGGACGTGCAGGCTGATGAAATCTGGAGCT ACATCGGCATGAAGGAGAAGACCCGCAAACGCAAGAACCGCTCTGAGGAC TTCGGCGACTCTTGGACATGGATCGCTGTCGAGCGTCACACCAAGCTCGT GCTGGCCCAACGCGACGGCACTGACTGTCAGGCATTCCTCAACAAGATGA ACCGAGCTGTCTCTGGTCGCTTCCAGATGACGACTGACGGCTTGGGAGCG TACCGCTACAGTGTGCCTTTCACCTTCCGGTCGAATGTGGATTACGGGAT GCTCATCAAGCACTATCAGTCCAACAACACGGAGAAGCGATACTCACCGG CCAATATAATATCCATCGAGAGGGCTCGCGTTTTCGGCAACCCGGACATG GAGAACGTTTGCACGAGCCATGTTGAGCGTCTCAATCTTACGCTCCGGAT GCAGATGCGACGCTTCACCCGGCTGACGAACGGCTTCTCAAAGTCACTGG AGCATCATATGGCGATGCAGAACCTGTTCTTCGCATGGTACAATTTCTGT CGTCCTCACATGGGGTTTCAGAAGAAGGGGCAGAAGGTTCCTCCGACCAC GCCAGCGATGGCGAGTGGGTTGGCCAGTAAGCCTTGGACGATCAAGCGAC TGTTGAGTGAATCGGCGAAGTACGCGGTGGCAACATGA
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Coding sequence (CDS) from alignment at M-pyrifera_M_contig82637:5..892+

>mRNA_M-pyrifera_M_contig82637.19316.1 ID=mRNA_M-pyrifera_M_contig82637.19316.1|Name=mRNA_M-pyrifera_M_contig82637.19316.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=1776bp|location=Sequence derived from alignment at M-pyrifera_M_contig82637:5..892+ (Macrocystis pyrifera P11B4 male)
ACGTTCTCTGACGAGCACGACCCCACCGGCCCACTCGGCACAATGCGGAT
CGACATCGACACAGCCTGCATGGCGATCAACCTGTTGCTGGAAGGGATGA
GCGTCCGAGCCACTGAGCGAATGACGGGCGTCCACCGCAACACGCTGTGC
GACCTCCTGCTGGTCGTGGGCGAGCGATGTGAGCAGTTCCTGTCCGAGAC
CATCCGCGACGTCGAGGTGAAGGACGTGCAGGCTGATGAAATCTGGAGCT
ACATCGGCATGAAGGAGAAGACCCGCAAACGCAAGAACCGCTCTGAGGAC
TTCGGCGACTCTTGGACATGGATCGCTGTCGAGCGTCACACCAAGCTCGT
GCTGGCCCAACGCGACGGCACTGACTGTCAGGCATTCCTCAACAAGATGA
ACCGAGCTGTCTCTGGTCGCTTCCAGATGACGACTGACGGCTTGGGAGCG
TACCGCTACAGTGTGCCTTTCACCTTCCGGTCGAATGTGGATTACGGGAT
GCTCATCAAGCACTATCAGTCCAACAACACGGAGAAGCGATACTCACCGG
CCAATATAATATCCATCGAGAGGGCTCGCGTTTTCGGCAACCCGGACATG
GAGAACGTTTGCACGAGCCATGTTGAGCGTCTCAATCTTACGCTCCGGAT
GCAGATGCGACGCTTCACCCGGCTGACGAACGGCTTCTCAAAGTCACTGG
AGCATCATATGGCGATGCAGAACCTGTTCTTCGCATGGTACAATTTCTGT
CGTCCTCACATGGGGTTTCAGAAGAAGGGGCAGAAGGTTCCTCCGACCAC
GCCAGCGATGGCGAGTGGGTTGGCCAGTAAGCCTTGGACGATCAAGCGAC
TGTTGAGTGAATCGGCGAAGTACGCGGTGGCAACATGAACGTTCTCTGAC
GAGCACGACCCCACCGGCCCACTCGGCACAATGCGGATCGACATCGACAC
AGCCTGCATGGCGATCAACCTGTTGCTGGAAGGGATGAGCGTCCGAGCCA
CTGAGCGAATGACGGGCGTCCACCGCAACACGCTGTGCGACCTCCTGCTG
GTCGTGGGCGAGCGATGTGAGCAGTTCCTGTCCGAGACCATCCGCGACGT
CGAGGTGAAGGACGTGCAGGCTGATGAAATCTGGAGCTACATCGGCATGA
AGGAGAAGACCCGCAAACGCAAGAACCGCTCTGAGGACTTCGGCGACTCT
TGGACATGGATCGCTGTCGAGCGTCACACCAAGCTCGTGCTGGCCCAACG
CGACGGCACTGACTGTCAGGCATTCCTCAACAAGATGAACCGAGCTGTCT
CTGGTCGCTTCCAGATGACGACTGACGGCTTGGGAGCGTACCGCTACAGT
GTGCCTTTCACCTTCCGGTCGAATGTGGATTACGGGATGCTCATCAAGCA
CTATCAGTCCAACAACACGGAGAAGCGATACTCACCGGCCAATATAATAT
CCATCGAGAGGGCTCGCGTTTTCGGCAACCCGGACATGGAGAACGTTTGC
ACGAGCCATGTTGAGCGTCTCAATCTTACGCTCCGGATGCAGATGCGACG
CTTCACCCGGCTGACGAACGGCTTCTCAAAGTCACTGGAGCATCATATGG
CGATGCAGAACCTGTTCTTCGCATGGTACAATTTCTGTCGTCCTCACATG
GGGTTTCAGAAGAAGGGGCAGAAGGTTCCTCCGACCACGCCAGCGATGGC
GAGTGGGTTGGCCAGTAAGCCTTGGACGATCAAGCGACTGTTGAGTGAAT
CGGCGAAGTACGCGGTGGCAACATGA
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