mRNA_M-pyrifera_M_contig8262.19311.1 (mRNA) Macrocystis pyrifera P11B4 male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_M-pyrifera_M_contig8262.19311.1
Unique NamemRNA_M-pyrifera_M_contig8262.19311.1
TypemRNA
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Homology
BLAST of mRNA_M-pyrifera_M_contig8262.19311.1 vs. uniprot
Match: D7FRU1_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FRU1_ECTSI)

HSP 1 Score: 428 bits (1101), Expect = 6.050e-142
Identity = 255/518 (49.23%), Postives = 330/518 (63.71%), Query Frame = 1
Query:    1 AMATLLCKETWVFSTR-GVDGTLTIGACFVFLAYILHPAIEMAYRRVRAYRAWRAIEKGQSVEVTNYFIMEEIFWGRGKWDAARIITVLLAAFSLASWGLELSMDLAYYEGDTDLLNRPPPVITR---NVSGTNHWQVKTQEDLGAS---DWRDLP--NMFENGAKSRYYMEANTR-YEGA------VNGAISVAYWDTEAAKAPGQFYFLDGQTTAVKGLKCTGTKTPNAVDVYLGADKVWGNVLECEHGPSLTDELLLLHDDKNCPPPTIIMTSSE-GEVFLIVEENISYPSFLYSVWTVGRQYGNSTELKHAFHIAATMRLVEAIVTGIVHGEVSGGGCFGVLRKFSETRRPCEGVVLRASPFGEHPTGDSVKIQELEHIEFGLEISMNALVCSVCLMVLASIGIAWLCSVRSSIGMDVYNRDELIRVVSMSGTTADCDFLSQ--MRIFVRKESSGQIKVVINDASKTHSRCAQIF-KHGVKKVNNSDPKLPATG---VAPSVDGFTGTVDPMRS 1485
            +++ LL  +TWV     G DGTLTIG  FV LAY LHPAIE A+ R+RAYRAWR I+K Q+VEVT+Y +M E+F GRG WD+AR I V+LA FSLASWGLELSMDLA  EG+ DLLNRPPPV  R   N + T+ WQV T  D+      +WR L   N+ +  A SRYY+  +TR Y G       +NG I VA WD +    P  FY ++G    V  L+C+G    +A +VYLG D +WGN L+CE GP  T             PP +++T+ + G V +IVEE+ SYP+FLYSVWT   +  +S EL + FH+ +T+RLVEA++TGIVHGE  GG CFG+LR FSETR   E  + RASPFGE PTGD+V +Q+LE IE G+EI+MNALVC + +M   ++ + WL  +R+SIGMDVY+RDEL+R VS+ G  +         +RIFVR+E SG I V IND+     R  + F +    KV   D +LPA G    A S D F G   P+++
Sbjct:    3 SLSNLLGDKTWVLPLADGFDGTLTIGWTFVLLAYFLHPAIEWAFHRLRAYRAWRCIQKRQAVEVTSYNLMAEVFGGRGSWDSARNIAVILAVFSLASWGLELSMDLASLEGEADLLNRPPPVFLRPETNDTNTDPWQVLTLSDIDPDYNGNWRGLEHLNVEDTHANSRYYIVKDTRDYLGKTAKDTFINGEILVASWDDK----PSLFYDINGAN--VDSLECSGETLKDA-EVYLGTD-LWGNALDCERGPRPTG--------LTTSPPAVVLTNGDSGLVSVIVEESSSYPTFLYSVWTA--EGSDSVELAYLFHVHSTVRLVEAVITGIVHGETEGGACFGLLRVFSETRVEYEDGLDRASPFGEIPTGDTVLVQDLETIEAGVEINMNALVCLLWVMASTAVCVVWLICLRNSIGMDVYDRDELLRAVSLQGHASRDPAAEHPAIRIFVRREDSGHITVFINDSHDKEQRAWERFLRRRTSKVVEGDDRLPAGGDADAALSDDKFGGATVPVKN 502          
BLAST of mRNA_M-pyrifera_M_contig8262.19311.1 vs. uniprot
Match: D8LC87_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LC87_ECTSI)

HSP 1 Score: 355 bits (911), Expect = 2.450e-110
Identity = 210/471 (44.59%), Postives = 280/471 (59.45%), Query Frame = 1
Query:   22 KETWVFSTRGVDGTLTIGACFVFLAYILHPAIEMAYRRVRAYRAWRAIEKGQSVEVTNYFIMEEIFWGRGKWDAARIITVLLAAFSLASWGLELSMDLAYYEGDTDLLNRPPPVITRNVSGTNHWQVKTQEDLGAS---DWRDLPNMFENGAKSRYYMEA------NTRYEGAVNGAISVAYWDTEAAKAPGQFYFLDGQTTAVKGLKCTGTKTPNAVDVYLGADKVWGNVLECEHGPSLTDELLLLHDDKNCPPPTIIMTSSEGEVFLIVEENISYPSFLYSVWTVGRQYGNSTELKHAFHIAATMRLVEAIVTGIVHGEVSGGGCFGVLRKFSETRRPCEGVVL------RASPFGEHPTGDSV-KIQELEHIEFGLEISMNALVCSVCLMVLASIGIAWLCSVRSSIGMDVYNRDELIRVVSMSGTTADCD--FLSQMRIFVRKESSGQIKVVINDASKTHSRCAQIF 1380
             + W   T+  + T  IG  FVFLAY LHP IE  Y++VRA RAWRA+EK + V+VT Y ++ E+F GRGKWDAAR +T+LLAAFSL SW LELS+++ + EG   LLN P P+   N +    WQV   E++       WRDL NM E  AKS Y++        + + E  V+G I VA WD +     G  Y+    T  V  + C GT      DVYL  +  WG+ L C  GP        L ++K    P II+  SEGEV +IVEE  ++PSFLYSVWT G    +S EL ++FHI++T+RL EA+VTGIV+GE  GG CFG+LR F+  R   EG+        RA PFGE P  D V  +Q++E IE G+ ++ NALV  VCL+VL+ +GI W   + SS+ MDVY+RDEL+R +S      D D    S MRI+V+KE  G++ VVI+ +    + CA+  
Sbjct:   13 SKKWHLPTQ--EPTFAIGLSFVFLAYFLHPRIEATYQKVRAARAWRAVEKHKRVDVTTYPMVSEVFRGRGKWDAARAVTLLLAAFSLGSWVLELSLEIDHVEGGARLLNLPVPIYLVNQTSL-AWQVMPLEEINPEYGRAWRDLDNMEEKQAKSTYFVTGYREHAWSKKIETHVDGEIVVASWDPDDKHRAG-LYYGSNHTATVDSITCKGT----GGDVYLYDEAAWGSFLWCGEGP--------LAENKTSSQPVIILEKSEGEVSVIVEEVGTHPSFLYSVWTAGS--ADSKELAYSFHISSTVRLAEAVVTGIVNGETGGGPCFGLLRTFNAGRDMEEGISTGEEERERAKPFGEKPEDDKVDSLQDVETIEVGVLMNTNALVAFVCLLVLSLVGIGWSMCLESSVEMDVYDRDELLRAISQQAQGEDNDPSTRSDMRIYVQKERGGELNVVISASDDDQNGCARFL 465          
BLAST of mRNA_M-pyrifera_M_contig8262.19311.1 vs. uniprot
Match: D7FRT6_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FRT6_ECTSI)

HSP 1 Score: 343 bits (880), Expect = 2.140e-107
Identity = 211/521 (40.50%), Postives = 287/521 (55.09%), Query Frame = 1
Query:   22 KETWVFSTRGVDGTLTIGACFVFLAYILHPAIEMAYRRVRAYRAWRAIEKGQSVEVTNYFIMEEIFWGRGKWDAARIITVLLAAFSLASWGLELSMDLAYYEGDTDLLNRPPPVITRNVSGTNHWQVKTQEDLGASD------WRDLPNMFENGAKSRYYMEANTR------YEGAVNGAISVAYWDTEAAKAPGQFY--------FLDGQTTAV-KGLKCTGTKTP-NAVDVYL---GADKVWGNVLECEHGPSLTDELLLLHDDKNCPPPTIIMTSSEGEVFLIVEENISYPSFLYSVWTVGRQYGNSTELKHAFHIAATMRLVEAIVTGIVHGEVSGGGCFGVLRKFSETRRPCEG----VVLRASPFGEHPTGDSV-KIQELEHIEFGLEISMNALVCSVCLMVLASIGIAWLCSVRSSIGMDVYNRDELIRVVSMSGTTADCDFLSQ---MRIFVRKESSGQIKVVINDASKTHSRCAQIFKHGVKKVNNSDPKLPATGVAPSVDGFTGTVDPMRS 1485
            K    +   G+DGT  IG  F+ LAY LHP +  AY RVRAYRAWRAIEKG++VEVT Y   EEI  GRG WDA RI+TVLL  F++ASWGLEL +D   +E +   L +P PV  +++     WQV   +++   D      W DLPN+ +  AKS YY+E   R       E  ++G I VA WD   A++    +        + +G  TAV + + C+ +  P     VY       + WG V+ECE GP L +        +   P  I+  +   E  +I+EE  ++ SFLYSVW      G+S  L +AFHIA+T+RL EA+VTGIV GE SGGGCFG+LR FS    P E     ++++A PFGE+P    V K+ ++E IE G++I++ A+ C VC++ L  +GI W   +  S GMD+Y+RDELIR VS+ G     D  +Q   MRIFVR+E +G I V I+D  +        F    K    +DP   A  V  + D F G   P  S
Sbjct:   21 KSAAEWPINGIDGTRAIGLSFIGLAYFLHPLVVWAYHRVRAYRAWRAIEKGRAVEVTAYSNREEILRGRGVWDATRIVTVLLVVFNVASWGLELMLDQYSHENEACPLTQPSPVYRKDLDNNARWQVLNLDEINGEDRDYNGSWLDLPNVSKTEAKSLYYVENFKRSAWSDPVEKDISGEIIVANWDPAIAESLSFSFGESISSGSYEEGTATAVVEAVNCSSSSDPLKDAPVYRKMNNKSEEWGRVVECEAGPRLAN------GGEQAQPAIILTQNGTNETHVIIEETTTFLSFLYSVWKTN---GDSVTLTYAFHIASTVRLAEAVVTGIVLGESSGGGCFGMLRAFSRGPEPPEDEYAKMMVKALPFGENPQSGKVEKLTDVETIEAGIDINVAAMTCLVCVLSLTVVGIVWAVYLGRSTGMDIYDRDELIRAVSLQGHGRAVDLAAQHSRMRIFVRREDNGGISVAISDTGQAEPGGCWRFWPCKKVGETADPSPVADTVIQNNDDFGGASAPAGS 532          
BLAST of mRNA_M-pyrifera_M_contig8262.19311.1 vs. uniprot
Match: A0A6H5JST2_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JST2_9PHAE)

HSP 1 Score: 342 bits (877), Expect = 6.620e-107
Identity = 211/520 (40.58%), Postives = 280/520 (53.85%), Query Frame = 1
Query:   46 RGVDGTLTIGACFVFLAYILHPAIEMAYRRVRAYRAWRAIEKGQSVEVTNYFIMEEIFWGRGKWDAARIITVLLAAFSLASWGLELSMDLAYYEGDTDLLNRPPPVITRNVSGTNHWQVKTQEDLGASD-------WRDLPNMFENGAKSRYYMEANTR------YEGAVNGAISVAYWDTEAAKAPGQFYFLDGQ------------TTAVKGLKCTGTKTPNAVDVYL---GADKVWGNVLECEHGPSLTDELLLLHDDKNCPPPTIIMTSSEGEVFLIVEENISYPSFLYSVWTVGRQYGNSTELKHAFHIAATMRLVEAIVTGIVHGEVSGGGCFGVLRKFSETRRPCE---GVVLRASPFGEHPTGDSV-KIQELEHIEFGLEISMNALVCSVCLMVLASIGIAWLCSVRSSIGMDVYNR-----DELIRVVSMSGTTADCDFL---SQMRIFVRKESSGQIKVVINDASKTHSRCAQIFKHGVKKVNNSDPKLPATGVAPSVDGFTGTVDPMRS 1485
             G+DGT  I   F+ LAY+LHP +  AY RVRAYRAWRAIE G+ VEVT Y   EEI  GRG WDA RI+TVLL  F++ASW LEL +DL  +E +   L +PPPV   N+ G   WQV   +++   D       W DLPN+ E  AKS YY+E   R       E  ++G I VA WD   A   G   F  G+            T  V+ + C+ +       VY       + WG V+ECE GP L +        +   P  I+      E  +I+EE  ++ SFLYSVW      G S  L +AFHIA+T+RL EA+VTGIV GE +GGGCFG+LR FS    P E   G +++A PFGE+P    V K+ ++E IE G++I++ A+ C VC++ L  +G+ W   +  S GMD+Y+R     DELIR VS+ G   + D     S++RIFVR+E +G I V I+D  +        F    K    +DP   A  V  + DGF G   P  S
Sbjct:   29 NGIDGTRAISLSFIVLAYVLHPLVIQAYHRVRAYRAWRAIENGRVVEVTAYSDREEILRGRGVWDATRIVTVLLVVFNVASWVLELMLDLYSFENEAYPLTQPPPVYRENIQGNASWQVLNLDEINGEDRKYDGSSWFDLPNVSETEAKSLYYVENFKRSAWSDGVEKDISGDIIVANWDPAIA---GSLNFFFGENILSRSYEEKTATAVVEAVDCSSSGRLKDAPVYRKINNKSEEWGRVVECEVGPRLPN------GSEQAQPAIILTQHGTNETHVIIEETTTFLSFLYSVWKTN---GESVNLSYAFHIASTVRLAEAVVTGIVLGESTGGGCFGMLRAFSRGPNPPEDEYGEMIKALPFGENPQSGKVQKLTDVETIEAGIDINVAAMSCLVCVLSLTVVGVVWAVYLGRSTGMDIYDRWGTAWDELIRAVSLQGQRRELDPAAEHSKIRIFVRREDNGSISVAISDTGQAEPGGCWRFWPCKKVAETADPSPVADTVIQNNDGFGGASVPAGS 536          
BLAST of mRNA_M-pyrifera_M_contig8262.19311.1 vs. uniprot
Match: D7FRU0_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FRU0_ECTSI)

HSP 1 Score: 320 bits (820), Expect = 7.980e-98
Identity = 193/435 (44.37%), Postives = 260/435 (59.77%), Query Frame = 1
Query:    4 MATLLCKETWVFSTRGVDGTLTIGACFVFLAYILHPAIEMAYRRVRAYRAWRAIEKGQSVEVTNYFIMEEIFWGRGKWDAARIITVLLAAFSLASWGLELSMDLAYYEGDTDLLNRPPPVI---TRNVSGTNHWQVKTQEDLGAS---DWRDLPNMFENGAKSRYYMEANTRYEGA------VNGAISVAYWDTEAAKAPGQFYFLDGQTTAVKGLKCT--GTKTPNAVDVYLGADKV--WGNVLECEHGPSLTDELLLLHDDKNCPPPTIIMTSSEG-EVFLIVEENISYPSFLYSVW-----TVGRQYGNSTELKHAFHIAATMRLVEAIVTGIVHGEVSGGG--CFGVLRKFS---ETRRPCEGVVLRASPFGEHPTGDSV-KIQELEHIEFGLEISMNALVCSVCLMVLASIGIAWLCSVRSSIGMDVYNR 1224
            ++TLL  ETW   T GVD TL IG  F+FLAYILHPAIE AY+RVRAY AWR IEK Q V+VT Y ++ E+F GRG+WDAAR+IT+LL AFSLASW LELSMDL   +    LL +PPPV      N +G   W V    ++ +    +W  LPN+FE  AKSRYY++ +T Y  +      ++G I VA W  E  + P    +    T  V G+ C+  GT+    V      D +  WG VLEC+ GP +T+             P+II+T+ +G +  +IVEE   +PSFLYSVW     ++     +S E+ +AFHIA+T+RL EA+VTGIV+G   GGG  CFG+LR +S   +T    E    +A+PFGE P   +V  + E+E I  G+ ++ NA+V  V L+VL+ IG      +RS I MD+Y+R
Sbjct:    4 LSTLLSNETWTMPTGGVDSTLAIGLSFIFLAYILHPAIEAAYQRVRAYHAWRCIEKQQRVDVTTYLMLSELFAGRGRWDAARVITLLLLAFSLASWILELSMDLNPVDNPAHLLTQPPPVFKWDAENDNGEVPWHVLNLTEIDSEYQGNWWKLPNVFETFAKSRYYVQNDTYYAWSKRKDRYIDGEIIVASWSPE--EKPDSLIYGQSATVMVDGITCSSNGTRDDTTVTRRNATDHIEEWGTVLECDRGPGITN-------GTGKSKPSIILTAHDGGDTHVIVEETSKHPSFLYSVWNATGDSITAAGDSSVEIAYAFHIASTVRLAEAVVTGIVNGVAGGGGGACFGLLRAYSKGSDTPEFEEYGTEKATPFGEDPENGAVDSLNEVEIINTGVMMNANAMVAFVWLLVLSFIGFGMTFFLRSKIDMDIYDR 429          
BLAST of mRNA_M-pyrifera_M_contig8262.19311.1 vs. uniprot
Match: A0A6H5JPI8_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JPI8_9PHAE)

HSP 1 Score: 275 bits (704), Expect = 5.870e-82
Identity = 175/492 (35.57%), Postives = 258/492 (52.44%), Query Frame = 1
Query:   28 TWVFSTRGVDGTLTIGACFVFLAYILHPAIEMAYRRVRAYRAWRAIEKGQSVEVTNYFIMEEIFWGRGKWDAARIITVLLAAFSLASWGLELSMDLAYY-EGDTDLLNRPPPVITRN-----VSGTNHWQVKTQEDL---GASDWRDLPNMFENGAKSRYYMEANTRYEGAVNGAISVAYWDTEAAK-APGQFYFLDGQTTAVKGLKCTGTKTPNAVDVYLGADKVWGNVLECEHGPSLTDELLLLHDDKNCPPPTIIMTSSEGEVFLIVEENISYPSFLYSVWTVGRQYGNSTELKHAFHIAATMRLVEAIVTGIVHGEVSGGGCFGVLRKFSETRRPCE-GVVLRASPFGEHPTGDSV-KIQELEHIEFGLEISMNALVCSVCLMVLASIGIAWLCSVRSSIGMDVYNRDELIRVVSM-SGTTADCDFLSQMRIFVRKESSGQIKVVINDASKTHSRCAQIFKHGVKKVN-------NSDPKLPATGVAP 1443
            T +  T   +   +I    + L+ +LHP +   + R+RA  AW++IEK + VEVT Y I  E    RG+WD AR++T+LLAAF +++WGLELS+DLA   +G  DLLNRPPP++ R          + W V   E+    G S       + +  A + Y +      E  + G    A W  ++++ A G FY +D     V  + C+      ++ +       WG+V ECE GPSL +       +    PP I++ S+EGE +LIVEE  SYPSFLYSVW  G       +L HAF++++T RLVEAIV+G       GGGC  +L KFS           LR SPFGEHP+  SV ++ ++E I  G+ +S    VC V LMV+     A      S   +DVY+RD+LIR +S+ SG  AD   ++ ++I+VR+E +    ++I+D    +  CA + K  +  +        NS   +  +GV P
Sbjct:    2 TMIIPTSSDNVAFSIALGVLLLSVVLHPIVRWCFHRIRANVAWKSIEKQRPVEVTKYNIFSEALGDRGRWDMARVVTILLAAFHVSTWGLELSLDLALRTDGPVDLLNRPPPIVFRTQVVDVAHNFSDWIVIRNEEAIVEGGSLDHIRGTLVDGNATTTYRIG-----ESIIRGNTVFASWSPQSSRIASGLFYDIDNGQAIVSEIACSTPSRTGSLYITAEESSKWGDVSECESGPSLVNASA----NDRASPPVILLNSTEGEAYLIVEEESSYPSFLYSVWVPGEVKPQEAQLNHAFYVSSTTRLVEAIVSGXXXXXXXGGGCLDMLTKFSVQNATYSLNGALRVSPFGEHPSSSSVERLDQVEPIVVGVLVSDMGTVCGVMLMVVTGAAFAGCLCFHSRKALDVYDRDQLIRAISLPSGEGADGKPVA-LKIYVRQERNNGFSIIISDDG-VYRGCAGLKKRLLASMKSDSGVLENSAHSMSGSGVLP 482          
BLAST of mRNA_M-pyrifera_M_contig8262.19311.1 vs. uniprot
Match: A0A6H5JMP8_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JMP8_9PHAE)

HSP 1 Score: 259 bits (662), Expect = 5.800e-75
Identity = 178/512 (34.77%), Postives = 269/512 (52.54%), Query Frame = 1
Query:   22 KETWVFSTRGVDGTLTIGACFVFLAYILHPAIEMAYRRVRAYRAWRAIEKGQSVEVTNYFIMEEIFWGRGKWDAARIITVLLAAFSLASWGLELSMDLAYYEGDTDLLNRPPPVITRNVSGTNH--WQVKTQEDLGAS---DWRDLPNMFENGAKSRYYMEANTRYEGA------VNGAISVAYWDTEAAKAPGQFYFLDGQTTAVKGLKCTG-----TKTPNAVDVYLGAD---KVWGNVLECEHGPSLTDELLLLHDDKNCPPPTIIMTSSE-GEVFLIVEENISYPSFLYSVW-----TVGRQYGNST-ELKHAFHIAATMRLVEAIVTGIVHGEVS--GGGCFGVLRKFSETRRPCEGVVL-----RASPFGEHPTGDSV-KIQELEHIEFGLEISMNALVCSVCLMVLASIGIAWLCSVRSSIGMDVYNRDELIRVVSMS--GTTADCDFLSQMRIFVRKES-SGQIKVVINDASKTHSRCAQIFKHGVKKVNNSDPKLPATGVAPS 1446
               W   T  ++ TL IG  ++FLAY++HP  + AY RVRAYRAWR IE+G+ V+VT+Y    E+  G  + D AR++ +LL  F+LA W LELS+D             PPPV   +   +    W V +  ++      DW + PN+FE  AKSRYY++    Y  +      +NG I VA W       P    + +  T  V G+ C+      T T + + V L      + WG VLEC+ GP++ +   ++ + K    P+II+T  E G+  +IVEE  S PSFLYSVW     ++    GNS+ E+ +AFHI++T+RL EA+VT IV+G     GG CFG+LR ++                +A PFGE P    +  ++++E+I  G+E++ N +V    ++ L+ IGIA    +     MD+YNRDEL+R  ++   G   D    S MRI V++E  S  + + I+++    S CA+       +V  +D  +PAT   P+
Sbjct:    8 SRKWELPTGTMNTTLVIGLAYIFLAYVVHPTTKYAYLRVRAYRAWRRIEEGERVDVTDYPTWMELLGGCARRDTARVVALLLLLFALALWYLELSIDWFPVSVPAYSQTLPPPVFQWSAGNSTPTPWHVLSLNEIAPEYEGDWLNQPNVFETVAKSRYYVKEYKNYPWSEPKDRYINGDIIVANWSRNTK--PDNLVYGENATVMVDGITCSSGGKAQTFTDDPIPVTLNRTNGIEEWGTVLECDQGPAVVE---VIGNSK----PSIILTERETGDTHVIVEETSSEPSFLYSVWNATGASITAAAGNSSVEIAYAFHISSTVRLAEAVVTAIVNGVAGDGGGACFGLLRAYNRGPYDTRDFSALYGKQKARPFGEDPVSHYIYSLKDIENIIIGVEMNTNGMVAFALVIGLSFIGIALTLFLCPKYEMDIYNRDELLRATNLQAQGLPDDPSRHSAMRIEVQREDRSRHLTITISESDSERSGCARFLLRRGPEV--TDDPVPATDNTPN 508          
BLAST of mRNA_M-pyrifera_M_contig8262.19311.1 vs. uniprot
Match: D7FRT9_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FRT9_ECTSI)

HSP 1 Score: 256 bits (653), Expect = 2.280e-74
Identity = 188/528 (35.61%), Postives = 269/528 (50.95%), Query Frame = 1
Query:   22 KETWVFSTRGVDGTLTIGACFVFLAYILHPAIEMAYRRVRAYRAWRAIEKGQSVEVTNYFIMEEIFWGRGKWDAARIITVLLAAFSLASWGLELSMDLAYYEGDTDLLNRPPPVI---TRNVSGTNHWQVKTQEDLGAS---DWRDLPNMFENGAKSRYYMEANTRY------EGAVNGAISVAYWDTEAAKAPGQFYFLDGQTTAVKGLKCTG-------TKTPNAVDVYLGAD--KVWGNVLECEHGPSLTDELLLLHDDKNCPPPTIIMTSSE-GEVFLIVEENISYPSFLYSVW-----TVGRQYGNST-ELKHAFHIAATMRLVEAIVTGIVHGEVS--GGGCFGVLRKFSETRRPCEGVVL-------RASPFGEHPTGDSVK-IQELEHIEFGLEISMNALVCSVCLMVLASIGIAWLCSVRSSIGMDVYNRDELIRVVSMS--GTTADCDFLSQMRIFVRKESSGQIKVVINDASKTHS-RCAQIFKHGVKKVNNSDPKLPATGVAPSVDGFTGTVDPMR 1482
               W   T  ++ TL IG  ++FLAY++HPA + AY RVRAYRAWR IE+G+ V+VTNY    E+    G+ D AR++ +LL  F+LASW L+LS+D+             P V      N +G + W V +  ++      DW + PN+FE  AKSRYY++    Y      +  +NG I VA W       P    + +  T  V G+ C+        T  P  V +  G D  +VWG VLEC+ GP+  D +           P+II+T  E G+  +IVEE  S PSFLYSVW     ++    GNS+ E+ +AFHI++T+RL EA+VT IV+G     GG CFG+LR ++  R P + V         +A PFGE P    +  +++ EHI  G+E++ N +V    ++ L+  GI     +     MDVYNRDEL+R +++   G   D    S MRI V++E                  RCA+       +V  +D  +PAT  AP+  G  G   P R
Sbjct:    8 SRKWDLPTGTMNTTLVIGLAYIFLAYVVHPATQYAYLRVRAYRAWRRIEEGERVDVTNYPTWMELLGNCGRRDTARVVALLLLLFALASWILDLSIDVFPVPNPAYSQTLAPQVFKWPASNSTGAS-WHVLSLTEIDQEYEGDWLNQPNVFETVAKSRYYVKEYKNYVWSEPKDRYINGDIIVANWSRNTK--PDNLVYGERATVMVDGITCSSGGEADIFTDDPIPVTLKNGTDAIEVWGTVLECDQGPAGIDVI-------GSSKPSIILTERETGDTHVIVEETSSEPSFLYSVWNATGASITAAAGNSSVEIAYAFHISSTVRLAEAVVTAIVNGVAGEGGGACFGLLRAYN--RGPYDTVDFSDSYGKQKAMPFGEDPVSHYINSLKDNEHIIVGVEMNTNGMVAFALVIGLSFTGIVLTLFLCPKYEMDVYNRDELLRAINLQAQGLPDDPSRHSAMRIEVQREXXXXXXXXXXXXXXXXXXRCARFLLRRGPEV--TDDPVPATDSAPN--GRDGVPVPRR 519          
BLAST of mRNA_M-pyrifera_M_contig8262.19311.1 vs. uniprot
Match: D7FRT8_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FRT8_ECTSI)

HSP 1 Score: 88.6 bits (218), Expect = 1.840e-16
Identity = 61/196 (31.12%), Postives = 92/196 (46.94%), Query Frame = 1
Query:  211 EIFWGRGKWDAARIITVLLAAFSLASWGLELSMDLAYYEGDTDLLNRPPPVITRNVSGTNH--WQVKTQEDLGA--SDWRDLPNMFENGAKSRYYMEANTRY------EGAVNGAISVAYWDTEAAKAPG-------QFYFLDGQTTAVKGLKCT-GTKTPNAVDVYL------GADKV--WGNVLECEHGPSLTD 720
            E+F   G+ D AR++++LL  FSLASW LELS+D+            PPP+   + S +    W V +  +L     DW +LPN+F    KSRYY+E    Y      +  ++G I+VA W     +             +    T  V+G+ C+ G K  N  + ++        D +  WG VLEC+ GP+  D
Sbjct:    2 ELFGDCGRRDTARVVSLLLLLFSLASWILELSIDVFPVSNPAYSQTLPPPIFKWSASNSTQTSWHVLSLTELPEYEEDWWNLPNVFATKGKSRYYVEEYKNYVWSEPQDRYIDGDITVASWPPNGKQHSNWSPDDKPDLVYGKSDTVMVEGITCSSGGKGANLTNDFVPVTLKNATDDIEEWGTVLECDQGPARID 197          
BLAST of mRNA_M-pyrifera_M_contig8262.19311.1 vs. uniprot
Match: D7FV77_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FV77_ECTSI)

HSP 1 Score: 64.7 bits (156), Expect = 8.910e-8
Identity = 45/120 (37.50%), Postives = 66/120 (55.00%), Query Frame = 1
Query: 1030 LRASPFGEHPTGDSVK-IQELEHIEFGLEISMNALVCSVCLMVLASIGIAWLCSVRSSIGMDVYNRDELIRVVSM-SGTTADCDFLSQMRIFVRKESSGQIKVVINDASKTHSRCAQIFK 1383
            LR SPFGEHP   SV+ + ++E I  G+ +S    VC   LMV+     A      S   +DVY+RD+LIR +S+ SG  AD    + ++I+VR+E      +VI+D    +  CA + K
Sbjct:   18 LRVSPFGEHPRSSSVESLDQVEPIVAGVLVSNMGTVCGAMLMVVTGAAFAGCLCCHSRKALDVYDRDQLIRAISLPSGEGADGK-PAAIKIYVRQEQDNAFSIVISDDG-VYRGCAGLKK 135          
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig8262.19311.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 10
Match NameE-valueIdentityDescription
D7FRU1_ECTSI6.050e-14249.23Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
D8LC87_ECTSI2.450e-11044.59Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
D7FRT6_ECTSI2.140e-10740.50Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5JST2_9PHAE6.620e-10740.58Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7FRU0_ECTSI7.980e-9844.37Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5JPI8_9PHAE5.870e-8235.57Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5JMP8_9PHAE5.800e-7534.77Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7FRT9_ECTSI2.280e-7435.61Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
D7FRT8_ECTSI1.840e-1631.12Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
D7FV77_ECTSI8.910e-837.50Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig8262contigM-pyrifera_M_contig8262:4824..6507 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-19
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Properties
Property NameValue
Hectar predicted targeting categoryother localisation
Exons2
Model size1485
Cds size1482
Stop0
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig8262.19311.1prot_M-pyrifera_M_contig8262.19311.1Macrocystis pyrifera P11B4 malepolypeptideM-pyrifera_M_contig8262 4827..6507 +


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622816732.8798106-UTR-M-pyrifera_M_contig8262:4823..48261622816732.8798106-UTR-M-pyrifera_M_contig8262:4823..4826Macrocystis pyrifera P11B4 maleUTRM-pyrifera_M_contig8262 4824..4826 +
1692278146.1764593-UTR-M-pyrifera_M_contig8262:4823..48261692278146.1764593-UTR-M-pyrifera_M_contig8262:4823..4826Macrocystis pyrifera P11B4 maleUTRM-pyrifera_M_contig8262 4824..4826 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622816732.8942518-CDS-M-pyrifera_M_contig8262:4826..52221622816732.8942518-CDS-M-pyrifera_M_contig8262:4826..5222Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig8262 4827..5222 +
1692278146.1881726-CDS-M-pyrifera_M_contig8262:4826..52221692278146.1881726-CDS-M-pyrifera_M_contig8262:4826..5222Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig8262 4827..5222 +
1622816732.9059787-CDS-M-pyrifera_M_contig8262:5421..65071622816732.9059787-CDS-M-pyrifera_M_contig8262:5421..6507Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig8262 5422..6507 +
1692278146.1992135-CDS-M-pyrifera_M_contig8262:5421..65071692278146.1992135-CDS-M-pyrifera_M_contig8262:5421..6507Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig8262 5422..6507 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_M-pyrifera_M_contig8262.19311.1

>prot_M-pyrifera_M_contig8262.19311.1 ID=prot_M-pyrifera_M_contig8262.19311.1|Name=mRNA_M-pyrifera_M_contig8262.19311.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=494bp
MATLLCKETWVFSTRGVDGTLTIGACFVFLAYILHPAIEMAYRRVRAYRA
WRAIEKGQSVEVTNYFIMEEIFWGRGKWDAARIITVLLAAFSLASWGLEL
SMDLAYYEGDTDLLNRPPPVITRNVSGTNHWQVKTQEDLGASDWRDLPNM
FENGAKSRYYMEANTRYEGAVNGAISVAYWDTEAAKAPGQFYFLDGQTTA
VKGLKCTGTKTPNAVDVYLGADKVWGNVLECEHGPSLTDELLLLHDDKNC
PPPTIIMTSSEGEVFLIVEENISYPSFLYSVWTVGRQYGNSTELKHAFHI
AATMRLVEAIVTGIVHGEVSGGGCFGVLRKFSETRRPCEGVVLRASPFGE
HPTGDSVKIQELEHIEFGLEISMNALVCSVCLMVLASIGIAWLCSVRSSI
GMDVYNRDELIRVVSMSGTTADCDFLSQMRIFVRKESSGQIKVVINDASK
THSRCAQIFKHGVKKVNNSDPKLPATGVAPSVDGFTGTVDPMRS
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mRNA from alignment at M-pyrifera_M_contig8262:4824..6507+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_M-pyrifera_M_contig8262.19311.1 ID=mRNA_M-pyrifera_M_contig8262.19311.1|Name=mRNA_M-pyrifera_M_contig8262.19311.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=1684bp|location=Sequence derived from alignment at M-pyrifera_M_contig8262:4824..6507+ (Macrocystis pyrifera P11B4 male)
GCCATGGCCACCTTGCTATGCAAGGAAACGTGGGTATTTAGCACCAGAGG CGTAGACGGTACCCTCACCATCGGTGCGTGCTTCGTCTTCCTCGCCTACA TCTTGCACCCTGCCATCGAGATGGCGTATCGGCGAGTCCGGGCCTACCGC GCCTGGAGAGCAATTGAGAAGGGCCAATCTGTTGAAGTTACGAACTATTT CATTATGGAAGAGATCTTCTGGGGGAGGGGGAAATGGGATGCCGCCCGGA TTATAACCGTGCTGCTGGCCGCGTTTTCGCTGGCTTCCTGGGGTCTGGAG CTATCGATGGACCTGGCCTATTACGAAGGCGACACAGATCTGCTTAATCG ACCACCCCCAGTGATAACCAGAAACGTCAGTGGTACAAACCATTGGCAGG TGAGTCTATTCATGCAAATATATTAATCTCCGGTTCTTCCGTCACACGCT ATTTTACCGATAAAAAATGAGCCTTTGGGGCAGGGAATCGGGTGTTAGGG GTTGTTTAATCCGATATCCTTCAAAGACGCACCACCTAGCCGAACACAAG TTTCTGATGTTGTGCTATCGACTTTACGACTTGGATACCTTGTGGCAGGT GAAAACACAGGAAGACCTTGGTGCCTCAGACTGGCGGGATTTACCGAACA TGTTTGAAAATGGAGCTAAATCGAGGTATTATATGGAGGCCAACACTAGA TACGAGGGTGCTGTCAACGGCGCGATCAGCGTTGCATATTGGGACACAGA GGCTGCGAAAGCACCGGGCCAGTTCTATTTCCTCGACGGTCAGACTACGG CAGTGAAGGGCCTGAAGTGTACAGGAACGAAAACCCCCAACGCTGTCGAC GTATACCTTGGAGCCGACAAGGTATGGGGAAACGTTTTAGAGTGCGAGCA TGGACCCAGTCTAACGGACGAACTCCTCCTACTACACGACGATAAGAATT GTCCCCCCCCGACAATAATCATGACGAGCTCAGAGGGCGAGGTATTCCTC ATCGTGGAAGAGAACATCAGCTACCCCAGCTTTCTGTATTCTGTTTGGAC CGTCGGAAGACAATACGGCAATTCCACTGAACTGAAACATGCATTCCATA TCGCGGCCACCATGCGGCTTGTGGAAGCGATTGTCACTGGAATCGTGCAT GGAGAGGTATCGGGTGGTGGCTGCTTCGGGGTGCTCCGTAAGTTCAGCGA GACCCGACGTCCTTGCGAGGGCGTAGTCTTGCGAGCTTCTCCGTTCGGCG AACACCCCACCGGAGATAGCGTAAAAATACAAGAATTAGAGCATATAGAG TTCGGACTGGAAATTAGCATGAATGCACTGGTTTGTTCCGTGTGCCTTAT GGTGCTTGCTTCTATCGGCATTGCGTGGTTGTGCTCCGTGCGGTCCAGTA TCGGCATGGACGTGTACAATCGGGACGAGCTTATTCGCGTGGTTTCCATG TCTGGGACGACGGCCGATTGTGACTTTCTCTCTCAGATGCGTATTTTTGT TCGTAAGGAAAGCTCGGGCCAAATCAAAGTCGTCATTAACGACGCAAGTA AAACGCATAGCCGCTGTGCACAAATATTCAAACATGGAGTCAAGAAGGTG AACAATTCCGATCCTAAACTACCAGCCACCGGTGTGGCTCCATCTGTAGA CGGTTTCACTGGTACTGTCGACCCGATGAGGTCG
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Coding sequence (CDS) from alignment at M-pyrifera_M_contig8262:4824..6507+

>mRNA_M-pyrifera_M_contig8262.19311.1 ID=mRNA_M-pyrifera_M_contig8262.19311.1|Name=mRNA_M-pyrifera_M_contig8262.19311.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=2964bp|location=Sequence derived from alignment at M-pyrifera_M_contig8262:4824..6507+ (Macrocystis pyrifera P11B4 male)
ATGGCCACCTTGCTATGCAAGGAAACGTGGGTATTTAGCACCAGAGGCGT
AGACGGTACCCTCACCATCGGTGCGTGCTTCGTCTTCCTCGCCTACATCT
TGCACCCTGCCATCGAGATGGCGTATCGGCGAGTCCGGGCCTACCGCGCC
TGGAGAGCAATTGAGAAGGGCCAATCTGTTGAAGTTACGAACTATTTCAT
TATGGAAGAGATCTTCTGGGGGAGGGGGAAATGGGATGCCGCCCGGATTA
TAACCGTGCTGCTGGCCGCGTTTTCGCTGGCTTCCTGGGGTCTGGAGCTA
TCGATGGACCTGGCCTATTACGAAGGCGACACAGATCTGCTTAATCGACC
ACCCCCAGTGATAACCAGAAACGTCAGTGGTACAAACCATTGGCAGATGG
CCACCTTGCTATGCAAGGAAACGTGGGTATTTAGCACCAGAGGCGTAGAC
GGTACCCTCACCATCGGTGCGTGCTTCGTCTTCCTCGCCTACATCTTGCA
CCCTGCCATCGAGATGGCGTATCGGCGAGTCCGGGCCTACCGCGCCTGGA
GAGCAATTGAGAAGGGCCAATCTGTTGAAGTTACGAACTATTTCATTATG
GAAGAGATCTTCTGGGGGAGGGGGAAATGGGATGCCGCCCGGATTATAAC
CGTGCTGCTGGCCGCGTTTTCGCTGGCTTCCTGGGGTCTGGAGCTATCGA
TGGACCTGGCCTATTACGAAGGCGACACAGATCTGCTTAATCGACCACCC
CCAGTGATAACCAGAAACGTCAGTGGTACAAACCATTGGCAGGTGAAAAC
ACAGGAAGACCTTGGTGCCTCAGACTGGCGGGATTTACCGAACATGTTTG
AAAATGGAGCTAAATCGAGGTATTATATGGAGGCCAACACTAGATACGAG
GGTGCTGTCAACGGCGCGATCAGCGTTGCATATTGGGACACAGAGGCTGC
GAAAGCACCGGGCCAGTTCTATTTCCTCGACGGTCAGACTACGGCAGTGA
AGGGCCTGAAGTGTACAGGAACGAAAACCCCCAACGCTGTCGACGTATAC
CTTGGAGCCGACAAGGTATGGGGAAACGTTTTAGAGTGCGAGCATGGACC
CAGTCTAACGGACGAACTCCTCCTACTACACGACGATAAGAATTGTCCCC
CCCCGACAATAATCATGACGAGCTCAGAGGGCGAGGTATTCCTCATCGTG
GAAGAGAACATCAGCTACCCCAGCTTTCTGTATTCTGTTTGGACCGTCGG
AAGACAATACGGCAATTCCACTGAACTGAAACATGCATTCCATATCGCGG
CCACCATGCGGCTTGTGGAAGCGATTGTCACTGGAATCGTGCATGGAGAG
GTATCGGGTGGTGGCTGCTTCGGGGTGCTCCGTAAGTTCAGCGAGACCCG
ACGTCCTTGCGAGGGCGTAGTCTTGCGAGCTTCTCCGTTCGGCGAACACC
CCACCGGAGATAGCGTAAAAATACAAGAATTAGAGCATATAGAGTTCGGA
CTGGAAATTAGCATGAATGCACTGGTTTGTTCCGTGTGCCTTATGGTGCT
TGCTTCTATCGGCATTGCGTGGTTGTGCTCCGTGCGGTCCAGTATCGGCA
TGGACGTGTACAATCGGGACGAGCTTATTCGCGTGGTTTCCATGTCTGGG
ACGACGGCCGATTGTGACTTTCTCTCTCAGATGCGTATTTTTGTTCGTAA
GGAAAGCTCGGGCCAAATCAAAGTCGTCATTAACGACGCAAGTAAAACGC
ATAGCCGCTGTGCACAAATATTCAAACATGGAGTCAAGAAGGTGAACAAT
TCCGATCCTAAACTACCAGCCACCGGTGTGGCTCCATCTGTAGACGGTTT
CACTGGTACTGTCGACCCGATGAGGTCGGTGAAAACACAGGAAGACCTTG
GTGCCTCAGACTGGCGGGATTTACCGAACATGTTTGAAAATGGAGCTAAA
TCGAGGTATTATATGGAGGCCAACACTAGATACGAGGGTGCTGTCAACGG
CGCGATCAGCGTTGCATATTGGGACACAGAGGCTGCGAAAGCACCGGGCC
AGTTCTATTTCCTCGACGGTCAGACTACGGCAGTGAAGGGCCTGAAGTGT
ACAGGAACGAAAACCCCCAACGCTGTCGACGTATACCTTGGAGCCGACAA
GGTATGGGGAAACGTTTTAGAGTGCGAGCATGGACCCAGTCTAACGGACG
AACTCCTCCTACTACACGACGATAAGAATTGTCCCCCCCCGACAATAATC
ATGACGAGCTCAGAGGGCGAGGTATTCCTCATCGTGGAAGAGAACATCAG
CTACCCCAGCTTTCTGTATTCTGTTTGGACCGTCGGAAGACAATACGGCA
ATTCCACTGAACTGAAACATGCATTCCATATCGCGGCCACCATGCGGCTT
GTGGAAGCGATTGTCACTGGAATCGTGCATGGAGAGGTATCGGGTGGTGG
CTGCTTCGGGGTGCTCCGTAAGTTCAGCGAGACCCGACGTCCTTGCGAGG
GCGTAGTCTTGCGAGCTTCTCCGTTCGGCGAACACCCCACCGGAGATAGC
GTAAAAATACAAGAATTAGAGCATATAGAGTTCGGACTGGAAATTAGCAT
GAATGCACTGGTTTGTTCCGTGTGCCTTATGGTGCTTGCTTCTATCGGCA
TTGCGTGGTTGTGCTCCGTGCGGTCCAGTATCGGCATGGACGTGTACAAT
CGGGACGAGCTTATTCGCGTGGTTTCCATGTCTGGGACGACGGCCGATTG
TGACTTTCTCTCTCAGATGCGTATTTTTGTTCGTAAGGAAAGCTCGGGCC
AAATCAAAGTCGTCATTAACGACGCAAGTAAAACGCATAGCCGCTGTGCA
CAAATATTCAAACATGGAGTCAAGAAGGTGAACAATTCCGATCCTAAACT
ACCAGCCACCGGTGTGGCTCCATCTGTAGACGGTTTCACTGGTACTGTCG
ACCCGATGAGGTCG
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