mRNA_M-pyrifera_M_contig82571.19298.1 (mRNA) Macrocystis pyrifera P11B4 male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_M-pyrifera_M_contig82571.19298.1
Unique NamemRNA_M-pyrifera_M_contig82571.19298.1
TypemRNA
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Homology
BLAST of mRNA_M-pyrifera_M_contig82571.19298.1 vs. uniprot
Match: A0A7Y2D7J2_9ACTN (ABC transporter ATP-binding protein n=1 Tax=Acidimicrobiales bacterium TaxID=2201156 RepID=A0A7Y2D7J2_9ACTN)

HSP 1 Score: 355 bits (911), Expect = 1.410e-115
Identity = 196/303 (64.69%), Postives = 224/303 (73.93%), Query Frame = 1
Query:    1 FRMLGMFLMLGQRAKASAERIFELLDEVPDVVDRPDAGHLRSVRGEIEFDDVTFGYHSADSXXXXXXXXXXXXXXXXXEPDRVVAEPVLRHCSFRIEPGETVALVGRTGSGKSTVARLLSRYYDVDEGGGAVRVDGHDVRDLTQVSLRANIGMVADDPFLFSVSLADNIAYGRPGASRDDVVLAAKAAQAHDFISALPDGYDTVVGERGYTLSGGQRQRIAIARALLVNPKILVLDDATSAIDVLVEERIHAALDERLAERTTIVIAHRLSTIALADRVLLLEDGRVVASGPPRELLDTEPRY 909
            FRM+G  L+  QRA ASAERI+E+ D  PD+VD PDA HL  VRG + F++V F Y +AD+                  P+      VL   S  IEPGETVA+VGRTGSGKSTV RLL R+YDVD   GAVR+DGHDVRDLT  S+R ++GMV D+PFLFS S+ DNIA+GRP AS  +VV AAKAAQAHDFIS L +GYDTVVGERGYTLSGGQRQRIA+AR LL NP +LVLDDATSAIDV VEE+IH AL      RTT++IAHRLSTIALADRV+LL DGRVVASG   ELL TEPRY
Sbjct:  327 FRMVGFVLVQAQRAAASAERIYEIFDTEPDIVDAPDAVHLSEVRGAVSFENVRFTYPAADATGQ--------------RPE------VLHDFSLDIEPGETVAIVGRTGSGKSTVVRLLPRFYDVDA--GAVRIDGHDVRDLTLTSVRHHVGMVLDEPFLFSTSVRDNIAFGRPNASDAEVVAAAKAAQAHDFISELTEGYDTVVGERGYTLSGGQRQRIALARTLLENPTVLVLDDATSAIDVQVEEKIHQALRALTEHRTTLIIAHRLSTIALADRVVLLADGRVVASGTHAELLATEPRY 607          
BLAST of mRNA_M-pyrifera_M_contig82571.19298.1 vs. uniprot
Match: A0A6I2YF87_9ACTN (ATP-binding cassette domain-containing protein n=2 Tax=root TaxID=1 RepID=A0A6I2YF87_9ACTN)

HSP 1 Score: 350 bits (898), Expect = 1.260e-113
Identity = 196/303 (64.69%), Postives = 223/303 (73.60%), Query Frame = 1
Query:    1 FRMLGMFLMLGQRAKASAERIFELLDEVPDVVDRPDAGHLRSVRGEIEFDDVTFGYHSADSXXXXXXXXXXXXXXXXXEPDRVVAEPVLRHCSFRIEPGETVALVGRTGSGKSTVARLLSRYYDVDEGGGAVRVDGHDVRDLTQVSLRANIGMVADDPFLFSVSLADNIAYGRPGASRDDVVLAAKAAQAHDFISALPDGYDTVVGERGYTLSGGQRQRIAIARALLVNPKILVLDDATSAIDVLVEERIHAALDERLAERTTIVIAHRLSTIALADRVLLLEDGRVVASGPPRELLDTEPRY 909
            FRMLG  L+  QRA ASA+RIFE+LDEVP++VD PDA  L   +G IEF DV F Y S                      D  +A  VL   SF I PGE VA+VGRTGSGKST+ARLL R+YDV+  GGA+ +DG DVR LT  SLR ++G+V D+PFLFSVSL DNIAYGRP AS D+V+ AA AAQAH+F+ ALPDGY+TVVGERGYTLSGGQRQRIAIAR LLVNP+ILVLDDATSAIDV  EE IH AL   +  RTT+VIAHRLSTI+LADRVLLLE GR+VASG   ELL  EPRY
Sbjct:  321 FRMLGFVLIQWQRASASAQRIFEILDEVPEIVDPPDAVDLDDPQGRIEFRDVRFRYASLPGTA-----------------DDRLASVVLDGASFSIAPGERVAVVGRTGSGKSTIARLLPRFYDVE--GGAITIDGIDVRTLTLASLRHHVGLVLDEPFLFSVSLRDNIAYGRPTASMDEVIAAATAAQAHEFVMALPDGYETVVGERGYTLSGGQRQRIAIARTLLVNPRILVLDDATSAIDVSTEEFIHDALHTLMEGRTTLVIAHRLSTISLADRVLLLEGGRIVASGTHTELLANEPRY 604          
BLAST of mRNA_M-pyrifera_M_contig82571.19298.1 vs. uniprot
Match: A0A6J4I634_9ACTN (Heterodimeric efflux ABC transporter, permease/ATP-binding subunit 1 n=1 Tax=uncultured Acidimicrobiales bacterium TaxID=310071 RepID=A0A6J4I634_9ACTN)

HSP 1 Score: 347 bits (890), Expect = 3.730e-112
Identity = 194/303 (64.03%), Postives = 217/303 (71.62%), Query Frame = 1
Query:    1 FRMLGMFLMLGQRAKASAERIFELLDEVPDVVDRPDAGHLRSVRGEIEFDDVTFGYHSADSXXXXXXXXXXXXXXXXXEPDRVVAEPVLRHCSFRIEPGETVALVGRTGSGKSTVARLLSRYYDVDEGGGAVRVDGHDVRDLTQVSLRANIGMVADDPFLFSVSLADNIAYGRPGASRDDVVLAAKAAQAHDFISALPDGYDTVVGERGYTLSGGQRQRIAIARALLVNPKILVLDDATSAIDVLVEERIHAALDERLAERTTIVIAHRLSTIALADRVLLLEDGRVVASGPPRELLDTEPRY 909
            FRMLG  ++L QRA ASA RIFE+LDEVP +VDRP A  L    G I+F+DVTFGY                              PVL      +  GETVALVGRTG+GKST+ARLL+R+YDVD  GG+VRVDGHDVRDLT  SLRA + MV D+PFLFS S+ DNIAYGRP AS D V  AA AA A  FI ALP GYDT VGERGYTLSGGQRQRIAIAR LLV+PK+L+LDDATSAIDV VEERIH AL + L +RTTIVIAHRLSTIALADRVLLLE GR+VA G    L+ +EPRY
Sbjct:  341 FRMLGFLMLLSQRAAASAGRIFEILDEVPAIVDRPGAVDLVDPAGAIDFEDVTFGYGDGP--------------------------PVLDRLELHVAAGETVALVGRTGNGKSTLARLLTRFYDVD--GGSVRVDGHDVRDLTLASLRAQVAMVLDEPFLFSASVRDNIAYGRPDASDDQVTAAAVAADADGFIRALPFGYDTEVGERGYTLSGGQRQRIAIARTLLVDPKVLILDDATSAIDVHVEERIHRALHDLLGDRTTIVIAHRLSTIALADRVLLLEGGRIVADGTHAGLMASEPRY 615          
BLAST of mRNA_M-pyrifera_M_contig82571.19298.1 vs. uniprot
Match: A0A6J7QVJ0_9ZZZZ (Unannotated protein n=2 Tax=root TaxID=1 RepID=A0A6J7QVJ0_9ZZZZ)

HSP 1 Score: 343 bits (879), Expect = 7.170e-111
Identity = 179/303 (59.08%), Postives = 222/303 (73.27%), Query Frame = 1
Query:    1 FRMLGMFLMLGQRAKASAERIFELLDEVPDVVDRPDAGHLRSVRGEIEFDDVTFGYHSADSXXXXXXXXXXXXXXXXXEPDRVVAEPVLRHCSFRIEPGETVALVGRTGSGKSTVARLLSRYYDVDEGGGAVRVDGHDVRDLTQVSLRANIGMVADDPFLFSVSLADNIAYGRPGASRDDVVLAAKAAQAHDFISALPDGYDTVVGERGYTLSGGQRQRIAIARALLVNPKILVLDDATSAIDVLVEERIHAALDERLAERTTIVIAHRLSTIALADRVLLLEDGRVVASGPPRELLDTEPRY 909
            F MLGM +M+GQRA ASA+RIFE+LDE PD+V+RP A  +    G + F +V+F Y                              PVL     R+EPGETVALVGRTGSGKST+ARLL R+YDVD+  G+V +DGHDVRDLT  S+R N+G+V DD FLFS+S+ADNIAYGRP A+R+DV  AA+AA A++F++ALP+G+DTVVGERGYTLSGGQRQR+AIARALLVNP +L+LDDATSAIDV VE+ IH A +  L  RTT+++AHRLSTI LADRV L+EDG+V+A+G   +LL   P Y
Sbjct:  322 FMMLGMLVMMGQRAAASADRIFEVLDERPDIVERPGAYDVEHAEGLLTFRNVSFSYGEGP--------------------------PVLNGFDLRVEPGETVALVGRTGSGKSTIARLLLRFYDVDD--GSVSIDGHDVRDLTLASIRGNVGVVLDDSFLFSISIADNIAYGRPSATREDVEAAARAANAYEFVTALPEGFDTVVGERGYTLSGGQRQRLAIARALLVNPPVLILDDATSAIDVHVEQEIHRAFETLLEHRTTLIVAHRLSTITLADRVALIEDGKVIATGRHEDLLLNTPEY 596          
BLAST of mRNA_M-pyrifera_M_contig82571.19298.1 vs. uniprot
Match: A0A381U2H0_9ZZZZ (Uncharacterized protein (Fragment) n=1 Tax=marine metagenome TaxID=408172 RepID=A0A381U2H0_9ZZZZ)

HSP 1 Score: 335 bits (859), Expect = 1.160e-110
Identity = 189/303 (62.38%), Postives = 212/303 (69.97%), Query Frame = 1
Query:    1 FRMLGMFLMLGQRAKASAERIFELLDEVPDVVDRPDAGHLRSVRGEIEFDDVTFGYHSADSXXXXXXXXXXXXXXXXXEPDRVVAEPVLRHCSFRIEPGETVALVGRTGSGKSTVARLLSRYYDVDEGGGAVRVDGHDVRDLTQVSLRANIGMVADDPFLFSVSLADNIAYGRPGASRDDVVLAAKAAQAHDFISALPDGYDTVVGERGYTLSGGQRQRIAIARALLVNPKILVLDDATSAIDVLVEERIHAALDERLAERTTIVIAHRLSTIALADRVLLLEDGRVVASGPPRELLDTEPRY 909
            FRMLG  L+  QRA AS+ RIFE+LDEVP V +RP A HL    G +EF  V F Y  ADS                       A PVL      +EPGE VA+VGRTG GK+T+ARLL R+YDVD   GAV VDG+DVRDLT  SLR +   V D+PFLFS S+ DNIA+GRP A  DDVV AA AAQAH F+  L DGYD VVGERGYTLSGGQRQRIA+AR+LL NP+ILVLDDATSA+DV VEE IH AL + LA+RTTIVIAHRLSTIALADRV+LLE G V ASG   ELL  EPRY
Sbjct:  105 FRMLGFVLLQAQRAAASSRRIFEILDEVPAVAERPGARHLLDPAGRVEFRGVRFAYPGADSD----------------------APPVLDGFDLVVEPGEIVAIVGRTGCGKTTIARLLCRFYDVDA--GAVLVDGNDVRDLTLASLRHHANQVTDEPFLFSESIRDNIAFGRPDAPLDDVVRAAGAAQAHGFVGELADGYDEVVGERGYTLSGGQRQRIALARSLLANPRILVLDDATSAVDVQVEEDIHGALRDLLADRTTIVIAHRLSTIALADRVVLLEGGSVAASGTHAELLAVEPRY 383          
BLAST of mRNA_M-pyrifera_M_contig82571.19298.1 vs. uniprot
Match: A0A539E4Z4_9ACTN (ATP-binding cassette, subfamily B, bacterial n=1 Tax=Acidimicrobiaceae bacterium TaxID=2024894 RepID=A0A539E4Z4_9ACTN)

HSP 1 Score: 335 bits (858), Expect = 9.540e-110
Identity = 186/303 (61.39%), Postives = 215/303 (70.96%), Query Frame = 1
Query:    1 FRMLGMFLMLGQRAKASAERIFELLDEVPDVVDRPDAGHLRSVRGEIEFDDVTFGYHSADSXXXXXXXXXXXXXXXXXEPDRVVAEPVLRHCSFRIEPGETVALVGRTGSGKSTVARLLSRYYDVDEGGGAVRVDGHDVRDLTQVSLRANIGMVADDPFLFSVSLADNIAYGRPGASRDDVVLAAKAAQAHDFISALPDGYDTVVGERGYTLSGGQRQRIAIARALLVNPKILVLDDATSAIDVLVEERIHAALDERLAERTTIVIAHRLSTIALADRVLLLEDGRVVASGPPRELLDTEPRY 909
            FR L   L+LGQRA ASA RIFE+LDE   VVDRP A  L   RG ++FDD+TF Y                             EPVL   + ++ PGETVA+VGRTGSGKST+AR+L+R+YDV +  G V VDGHDVRD+T  SLR ++G+V DDPFLFS S+ DNIA+GRP AS DDVV AA+AAQA +FI  L DGYDTVVGERGY LSGGQRQRIAIAR LL +P +LVLDDATSAIDV VE RIH AL + L  RTTI+IAHRLSTI LADRV+LLE G+VVA G   +LL  EPRY
Sbjct:  161 FRFLSFILILGQRAAASAGRIFEVLDERAGVVDRPGAVDLVDARGAVQFDDITFAYGGG--------------------------EPVLNGFTLQVCPGETVAIVGRTGSGKSTIARVLARFYDVQQ--GMVSVDGHDVRDVTLASLRHHVGVVLDDPFLFSASVRDNIAFGRPDASIDDVVAAARAAQADEFIGELRDGYDTVVGERGYDLSGGQRQRIAIARTLLADPAVLVLDDATSAIDVQVESRIHEALHQSLGTRTTILIAHRLSTITLADRVVLLEGGQVVADGTHAQLLADEPRY 435          
BLAST of mRNA_M-pyrifera_M_contig82571.19298.1 vs. uniprot
Match: A0A257RKC2_9ACTN (ABC transporter ATP-binding protein n=1 Tax=Actinobacteria bacterium 21-73-9 TaxID=1970489 RepID=A0A257RKC2_9ACTN)

HSP 1 Score: 336 bits (862), Expect = 3.020e-109
Identity = 185/303 (61.06%), Postives = 218/303 (71.95%), Query Frame = 1
Query:    1 FRMLGMFLMLGQRAKASAERIFELLDEVPDVVDRPDAGHLRSVRGEIEFDDVTFGYHSADSXXXXXXXXXXXXXXXXXEPDRVVAEPVLRHCSFRIEPGETVALVGRTGSGKSTVARLLSRYYDVDEGGGAVRVDGHDVRDLTQVSLRANIGMVADDPFLFSVSLADNIAYGRPGASRDDVVLAAKAAQAHDFISALPDGYDTVVGERGYTLSGGQRQRIAIARALLVNPKILVLDDATSAIDVLVEERIHAALDERLAERTTIVIAHRLSTIALADRVLLLEDGRVVASGPPRELLDTEPRY 909
            F MLG  +M+GQRAKASAERIFE+LDE P+VV+RP A  L   RGE+    V F Y +                             VL      + PGETVA+VGRTGSGKST+ARLL+R+YDV E  GA+ +DGHDVRDLT  SLR  +G+V D+PFLFSVS+ +NIAYGRP AS ++VV AA+AA AH+FI  LPDGYDTVVGERGYTLSGGQRQRIAIAR LL+NP +L+LDDATSAIDV VE  IH AL   LA RTT+VIAHR+STIALADRV+LL+ GR+VASG  + LL+ EP Y
Sbjct:  250 FMMLGQLVMMGQRAKASAERIFEILDERPEVVERPGAYDLVGARGEVALRGVGFAYANGVR--------------------------VLEGVDLEVSPGETVAIVGRTGSGKSTIARLLTRFYDVTE--GAITIDGHDVRDLTLESLRREVGVVLDEPFLFSVSIRENIAYGRPDASLEEVVAAARAANAHEFIVRLPDGYDTVVGERGYTLSGGQRQRIAIARTLLMNPPVLLLDDATSAIDVHVEAGIHEALSGLLATRTTLVIAHRVSTIALADRVVLLDGGRIVASGTHQALLEGEPLY 524          
BLAST of mRNA_M-pyrifera_M_contig82571.19298.1 vs. uniprot
Match: A0A538JQA4_9ACTN (ABC transporter ATP-binding protein n=1 Tax=Actinomycetia bacterium TaxID=1883427 RepID=A0A538JQA4_9ACTN)

HSP 1 Score: 338 bits (866), Expect = 5.420e-109
Identity = 184/303 (60.73%), Postives = 214/303 (70.63%), Query Frame = 1
Query:    1 FRMLGMFLMLGQRAKASAERIFELLDEVPDVVDRPDAGHLRSVRGEIEFDDVTFGYHSADSXXXXXXXXXXXXXXXXXEPDRVVAEPVLRHCSFRIEPGETVALVGRTGSGKSTVARLLSRYYDVDEGGGAVRVDGHDVRDLTQVSLRANIGMVADDPFLFSVSLADNIAYGRPGASRDDVVLAAKAAQAHDFISALPDGYDTVVGERGYTLSGGQRQRIAIARALLVNPKILVLDDATSAIDVLVEERIHAALDERLAERTTIVIAHRLSTIALADRVLLLEDGRVVASGPPRELLDTEPRY 909
            FRMLG F+M+GQRA ASA RI+E+LD  P+++DRP A  L S  G +++ DVTFGY  A                           PVL H    IE GETVALVGRTG GKSTVARLL+R+YDVD   G V +DGHDVRDLT VS+R  + MV D+PFLFS S+ DNIAYGRP A  DDVV AA+ A A +FI  LPDGYDT +GERGYTLSGGQRQRIAIAR LLVNP++L+LDDATSA+DV VEE IH AL   L  RTT++IAHRLSTI LA+RV+LLE G +VA G    L+ TEPRY
Sbjct:  306 FRMLGFFMMMGQRAAASAGRIYEILDTPPEILDRPGAIDLVSPEGRVDYRDVTFGYAGAP--------------------------PVLDHFDLHIEAGETVALVGRTGRGKSTVARLLTRFYDVDS--GHVEIDGHDVRDLTLVSVRGQVSMVLDEPFLFSASVRDNIAYGRPDAPFDDVVAAARTANAVEFIDELPDGYDTQIGERGYTLSGGQRQRIAIARTLLVNPRVLILDDATSAVDVHVEEEIHGALRGLLDGRTTLIIAHRLSTIRLAERVVLLERGHIVADGTHAGLMATEPRY 580          
BLAST of mRNA_M-pyrifera_M_contig82571.19298.1 vs. uniprot
Match: A0A349B7I7_9ACTN (ABC transporter ATP-binding protein n=1 Tax=Acidimicrobiaceae bacterium TaxID=2024894 RepID=A0A349B7I7_9ACTN)

HSP 1 Score: 336 bits (862), Expect = 1.320e-108
Identity = 184/303 (60.73%), Postives = 212/303 (69.97%), Query Frame = 1
Query:    1 FRMLGMFLMLGQRAKASAERIFELLDEVPDVVDRPDAGHLRSVRGEIEFDDVTFGYHSADSXXXXXXXXXXXXXXXXXEPDRVVAEPVLRHCSFRIEPGETVALVGRTGSGKSTVARLLSRYYDVDEGGGAVRVDGHDVRDLTQVSLRANIGMVADDPFLFSVSLADNIAYGRPGASRDDVVLAAKAAQAHDFISALPDGYDTVVGERGYTLSGGQRQRIAIARALLVNPKILVLDDATSAIDVLVEERIHAALDERLAERTTIVIAHRLSTIALADRVLLLEDGRVVASGPPRELLDTEPRY 909
            FRMLG F+++ QRA ASA RIFE+LD   +++DRPDA  L    G + FD VTF Y   D                           VL      + PGET+ALVG TGSGKSTVARLL R+YDVDE  GAVR+DGHDVRDLT  S+R ++GMV D+PFLFS S+ DNIAY RP A+RD+VV AAKAA AH FI  L DGYDTV+GERGYTLSGGQRQRIAIAR L+ NP +LVLDDATSA+DV VE  IH AL+   A+RTTIVIAHRLSTIALADRV LL  G+V+A G  +ELL  EP Y
Sbjct:  279 FRMLGFFMIMSQRAAASAGRIFEILDTPAEIIDRPDADDLVDPEGAVRFDHVTFRYGEDDQL-------------------------VLEDFDLEVRPGETMALVGGTGSGKSTVARLLLRFYDVDE--GAVRIDGHDVRDLTMASIRHHVGMVTDEPFLFSSSIHDNIAYARPDATRDEVVAAAKAANAHGFIGELADGYDTVIGERGYTLSGGQRQRIAIARTLVANPAVLVLDDATSAVDVRVEAEIHEALEHLSADRTTIVIAHRLSTIALADRVALLRHGKVLAVGTHQELLVHEPHY 554          
BLAST of mRNA_M-pyrifera_M_contig82571.19298.1 vs. uniprot
Match: A0A6J6CFX4_9ZZZZ (Unannotated protein n=2 Tax=root TaxID=1 RepID=A0A6J6CFX4_9ZZZZ)

HSP 1 Score: 337 bits (865), Expect = 1.500e-108
Identity = 184/303 (60.73%), Postives = 218/303 (71.95%), Query Frame = 1
Query:    1 FRMLGMFLMLGQRAKASAERIFELLDEVPDVVDRPDAGHLRSVRGEIEFDDVTFGYHSADSXXXXXXXXXXXXXXXXXEPDRVVAEPVLRHCSFRIEPGETVALVGRTGSGKSTVARLLSRYYDVDEGGGAVRVDGHDVRDLTQVSLRANIGMVADDPFLFSVSLADNIAYGRPGASRDDVVLAAKAAQAHDFISALPDGYDTVVGERGYTLSGGQRQRIAIARALLVNPKILVLDDATSAIDVLVEERIHAALDERLAERTTIVIAHRLSTIALADRVLLLEDGRVVASGPPRELLDTEPRY 909
            FR L   L++GQRA ASA RIFE+LDE P + DRP A  L   RGE+ FD VTFGY +                           EP+LR  SFR+ PGETVA+VGRTGSGKST+ARLL+R YDV    G+VR+DGHDVRDLT  S+R ++G+V DDPFLFS S+ DNIAYGRP A+R +V  AA  AQA +F+  LP+GYD+VVGERGY LSGGQRQRI+IAR LL  P +LVLDDATSAIDV VE++IH AL E L  RTTI++AHRLSTIALADRV+LL++GRV+A G    LL TEPRY
Sbjct:  326 FRFLSFILIMGQRAAASAGRIFEVLDERPGITDRPGAIDLVEPRGEVVFDHVTFGYANG--------------------------EPILRDLSFRVAPGETVAIVGRTGSGKSTIARLLARSYDVQA--GSVRIDGHDVRDLTVASVRHHVGVVLDDPFLFSASIHDNIAYGRPDATRAEVERAAAVAQAAEFVGDLPEGYDSVVGERGYDLSGGQRQRISIARTLLTAPAVLVLDDATSAIDVHVEQQIHGALHEVLGTRTTILVAHRLSTIALADRVVLLDEGRVMAEGTHAHLLATEPRY 600          
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig82571.19298.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A7Y2D7J2_9ACTN1.410e-11564.69ABC transporter ATP-binding protein n=1 Tax=Acidim... [more]
A0A6I2YF87_9ACTN1.260e-11364.69ATP-binding cassette domain-containing protein n=2... [more]
A0A6J4I634_9ACTN3.730e-11264.03Heterodimeric efflux ABC transporter, permease/ATP... [more]
A0A6J7QVJ0_9ZZZZ7.170e-11159.08Unannotated protein n=2 Tax=root TaxID=1 RepID=A0A... [more]
A0A381U2H0_9ZZZZ1.160e-11062.38Uncharacterized protein (Fragment) n=1 Tax=marine ... [more]
A0A539E4Z4_9ACTN9.540e-11061.39ATP-binding cassette, subfamily B, bacterial n=1 T... [more]
A0A257RKC2_9ACTN3.020e-10961.06ABC transporter ATP-binding protein n=1 Tax=Actino... [more]
A0A538JQA4_9ACTN5.420e-10960.73ABC transporter ATP-binding protein n=1 Tax=Actino... [more]
A0A349B7I7_9ACTN1.320e-10860.73ABC transporter ATP-binding protein n=1 Tax=Acidim... [more]
A0A6J6CFX4_9ZZZZ1.500e-10860.73Unannotated protein n=2 Tax=root TaxID=1 RepID=A0A... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig82571contigM-pyrifera_M_contig82571:1..909 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-19
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Properties
Property NameValue
Taxonomic scopeBacteria
Seed ortholog score331.6
Seed ortholog evalue3.7e-88
Seed eggNOG ortholog1449976.KALB_3115
Preferred nameiroC
KEGG koko:K06147,ko:K18895
KEGG TC3.A.1.106,3.A.1.106.7,3.A.1.109,3.A.1.21
KEGG Pathwayko02010,map02010
Hectar predicted targeting categoryother localisation
EggNOG free text desc.ABC-type multidrug transport system, ATPase and permease
EggNOG OGs2GITR@201174,4DXBD@85010,COG1132@1,COG1132@2
COG Functional cat.V
BiGG ReactioniUTI89_1310.UTI89_C1121
Best tax levelPseudonocardiales
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko02000
Exons1
Model size909
Cds size903
Stop0
Start1
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622816732.3913362-CDS-M-pyrifera_M_contig82571:0..9031622816732.3913362-CDS-M-pyrifera_M_contig82571:0..903Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig82571 1..903 -
1692278145.959105-CDS-M-pyrifera_M_contig82571:0..9031692278145.959105-CDS-M-pyrifera_M_contig82571:0..903Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig82571 1..903 -


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622816732.4040678-UTR-M-pyrifera_M_contig82571:903..9091622816732.4040678-UTR-M-pyrifera_M_contig82571:903..909Macrocystis pyrifera P11B4 maleUTRM-pyrifera_M_contig82571 904..909 -
1692278145.974791-UTR-M-pyrifera_M_contig82571:903..9091692278145.974791-UTR-M-pyrifera_M_contig82571:903..909Macrocystis pyrifera P11B4 maleUTRM-pyrifera_M_contig82571 904..909 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig82571.19298.1prot_M-pyrifera_M_contig82571.19298.1Macrocystis pyrifera P11B4 malepolypeptideM-pyrifera_M_contig82571 1..903 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_M-pyrifera_M_contig82571.19298.1

>prot_M-pyrifera_M_contig82571.19298.1 ID=prot_M-pyrifera_M_contig82571.19298.1|Name=mRNA_M-pyrifera_M_contig82571.19298.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=301bp
MLGMFLMLGQRAKASAERIFELLDEVPDVVDRPDAGHLRSVRGEIEFDDV
TFGYHSADSDSDTETRPEAESESDSDEPDRVVAEPVLRHCSFRIEPGETV
ALVGRTGSGKSTVARLLSRYYDVDEGGGAVRVDGHDVRDLTQVSLRANIG
MVADDPFLFSVSLADNIAYGRPGASRDDVVLAAKAAQAHDFISALPDGYD
TVVGERGYTLSGGQRQRIAIARALLVNPKILVLDDATSAIDVLVEERIHA
ALDERLAERTTIVIAHRLSTIALADRVLLLEDGRVVASGPPRELLDTEPR
Y
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mRNA from alignment at M-pyrifera_M_contig82571:1..909-

Legend: UTRCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_M-pyrifera_M_contig82571.19298.1 ID=mRNA_M-pyrifera_M_contig82571.19298.1|Name=mRNA_M-pyrifera_M_contig82571.19298.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=909bp|location=Sequence derived from alignment at M-pyrifera_M_contig82571:1..909- (Macrocystis pyrifera P11B4 male)
TTCCGGATGCTCGGCATGTTCTTGATGCTCGGGCAGCGAGCCAAGGCCTC GGCCGAGCGCATCTTCGAACTCCTCGACGAGGTGCCCGACGTGGTCGACC GACCCGACGCCGGCCATCTTCGATCGGTTCGAGGCGAGATCGAGTTCGAC GACGTCACCTTCGGCTATCACTCGGCCGATTCCGATTCCGACACCGAGAC CCGCCCCGAGGCCGAGTCGGAGTCGGATTCCGACGAGCCGGATCGTGTCG TGGCCGAACCGGTCCTTCGCCATTGCAGCTTCCGCATCGAGCCAGGCGAG ACCGTCGCCCTCGTCGGTCGAACGGGTTCGGGCAAGTCCACCGTCGCCCG ACTCCTGAGCCGTTACTACGACGTCGACGAGGGTGGGGGAGCGGTGCGCG TCGACGGTCACGACGTGCGAGACCTCACCCAGGTGAGTCTGCGAGCCAAC ATCGGCATGGTGGCCGACGATCCGTTCCTGTTCTCGGTCAGCCTGGCCGA CAACATCGCCTACGGACGGCCCGGCGCATCCCGTGACGACGTCGTCCTGG CGGCGAAGGCCGCCCAGGCCCACGACTTCATCTCGGCCTTGCCCGATGGC TACGACACCGTGGTCGGCGAGCGGGGCTACACCCTGTCGGGTGGCCAACG GCAGAGGATCGCCATCGCTCGGGCGCTCCTGGTCAATCCGAAGATCCTCG TGCTCGACGATGCCACCAGCGCCATCGACGTGCTGGTCGAAGAACGTATC CATGCTGCGCTCGACGAGCGTCTGGCCGAACGAACCACCATCGTCATCGC CCACCGGCTCTCGACCATCGCCCTCGCCGACCGGGTGCTGCTGCTCGAAG ACGGCCGAGTCGTGGCCTCGGGACCGCCCCGAGAGCTGTTGGACACCGAG CCTCGGTAC
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Coding sequence (CDS) from alignment at M-pyrifera_M_contig82571:1..909-

>mRNA_M-pyrifera_M_contig82571.19298.1 ID=mRNA_M-pyrifera_M_contig82571.19298.1|Name=mRNA_M-pyrifera_M_contig82571.19298.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=1806bp|location=Sequence derived from alignment at M-pyrifera_M_contig82571:1..909- (Macrocystis pyrifera P11B4 male)
ATGCTCGGCATGTTCTTGATGCTCGGGCAGCGAGCCAAGGCCTCGGCCGA
GCGCATCTTCGAACTCCTCGACGAGGTGCCCGACGTGGTCGACCGACCCG
ACGCCGGCCATCTTCGATCGGTTCGAGGCGAGATCGAGTTCGACGACGTC
ACCTTCGGCTATCACTCGGCCGATTCCGATTCCGACACCGAGACCCGCCC
CGAGGCCGAGTCGGAGTCGGATTCCGACGAGCCGGATCGTGTCGTGGCCG
AACCGGTCCTTCGCCATTGCAGCTTCCGCATCGAGCCAGGCGAGACCGTC
GCCCTCGTCGGTCGAACGGGTTCGGGCAAGTCCACCGTCGCCCGACTCCT
GAGCCGTTACTACGACGTCGACGAGGGTGGGGGAGCGGTGCGCGTCGACG
GTCACGACGTGCGAGACCTCACCCAGGTGAGTCTGCGAGCCAACATCGGC
ATGGTGGCCGACGATCCGTTCCTGTTCTCGGTCAGCCTGGCCGACAACAT
CGCCTACGGACGGCCCGGCGCATCCCGTGACGACGTCGTCCTGGCGGCGA
AGGCCGCCCAGGCCCACGACTTCATCTCGGCCTTGCCCGATGGCTACGAC
ACCGTGGTCGGCGAGCGGGGCTACACCCTGTCGGGTGGCCAACGGCAGAG
GATCGCCATCGCTCGGGCGCTCCTGGTCAATCCGAAGATCCTCGTGCTCG
ACGATGCCACCAGCGCCATCGACGTGCTGGTCGAAGAACGTATCCATGCT
GCGCTCGACGAGCGTCTGGCCGAACGAACCACCATCGTCATCGCCCACCG
GCTCTCGACCATCGCCCTCGCCGACCGGGTGCTGCTGCTCGAAGACGGCC
GAGTCGTGGCCTCGGGACCGCCCCGAGAGCTGTTGGACACCGAGCCTCGG
TACATGCTCGGCATGTTCTTGATGCTCGGGCAGCGAGCCAAGGCCTCGGC
CGAGCGCATCTTCGAACTCCTCGACGAGGTGCCCGACGTGGTCGACCGAC
CCGACGCCGGCCATCTTCGATCGGTTCGAGGCGAGATCGAGTTCGACGAC
GTCACCTTCGGCTATCACTCGGCCGATTCCGATTCCGACACCGAGACCCG
CCCCGAGGCCGAGTCGGAGTCGGATTCCGACGAGCCGGATCGTGTCGTGG
CCGAACCGGTCCTTCGCCATTGCAGCTTCCGCATCGAGCCAGGCGAGACC
GTCGCCCTCGTCGGTCGAACGGGTTCGGGCAAGTCCACCGTCGCCCGACT
CCTGAGCCGTTACTACGACGTCGACGAGGGTGGGGGAGCGGTGCGCGTCG
ACGGTCACGACGTGCGAGACCTCACCCAGGTGAGTCTGCGAGCCAACATC
GGCATGGTGGCCGACGATCCGTTCCTGTTCTCGGTCAGCCTGGCCGACAA
CATCGCCTACGGACGGCCCGGCGCATCCCGTGACGACGTCGTCCTGGCGG
CGAAGGCCGCCCAGGCCCACGACTTCATCTCGGCCTTGCCCGATGGCTAC
GACACCGTGGTCGGCGAGCGGGGCTACACCCTGTCGGGTGGCCAACGGCA
GAGGATCGCCATCGCTCGGGCGCTCCTGGTCAATCCGAAGATCCTCGTGC
TCGACGATGCCACCAGCGCCATCGACGTGCTGGTCGAAGAACGTATCCAT
GCTGCGCTCGACGAGCGTCTGGCCGAACGAACCACCATCGTCATCGCCCA
CCGGCTCTCGACCATCGCCCTCGCCGACCGGGTGCTGCTGCTCGAAGACG
GCCGAGTCGTGGCCTCGGGACCGCCCCGAGAGCTGTTGGACACCGAGCCT
CGGTAC
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