mRNA_M-pyrifera_M_contig8257.19297.1 (mRNA) Macrocystis pyrifera P11B4 male
Overview
Homology
BLAST of mRNA_M-pyrifera_M_contig8257.19297.1 vs. uniprot
Match: D7FUH7_ECTSI (VWFA domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FUH7_ECTSI) HSP 1 Score: 270 bits (690), Expect = 1.780e-88 Identity = 128/146 (87.67%), Postives = 141/146 (96.58%), Query Frame = 1 Query: 94 VCTQSEILDICADEECGMVRDFDNPSVRLPESVANGANLNPTNEDVIETMCYSVLLNTPLRDLYDTASSVGSNAVYFGAWTGVFRYFPGIAQSSCGTYDPRIRPWYVAASSGPKNVVIVLDVSGSMSQYGRLDLAKEAAETVISSL 531 +CTQ EIL+ICA+E+CGM+RD+DNP+VRLPESVA+G NLNPT+EDVIETMCYSVLLNTPLRDLY+ AS VGSNAVYFGAWTGVFRYFPGIAQ SCGTYDPRIRPWYVAASSGPK+VVIVLDVSGSMSQYGRLDLAKEAAETVI++L Sbjct: 1 MCTQYEILEICAEEDCGMIRDYDNPTVRLPESVADGENLNPTDEDVIETMCYSVLLNTPLRDLYEEASQVGSNAVYFGAWTGVFRYFPGIAQESCGTYDPRIRPWYVAASSGPKDVVIVLDVSGSMSQYGRLDLAKEAAETVINTL 146
BLAST of mRNA_M-pyrifera_M_contig8257.19297.1 vs. uniprot
Match: A0A7S2LVH6_9STRA (Hypothetical protein (Fragment) n=2 Tax=Skeletonema marinoi TaxID=267567 RepID=A0A7S2LVH6_9STRA) HSP 1 Score: 149 bits (375), Expect = 4.400e-39 Identity = 82/189 (43.39%), Postives = 115/189 (60.85%), Query Frame = 1 Query: 1 VLEAYGLRCAV-TESECANLHLDACRSRLPSGVCTQSE--ILDICADEE---CGMVRDFDNPSVRLPESVANGANLNPTNEDVIETMCYSVLLNTPLRDLYDT------ASSVGSNAVYFGAWTGVFRYFPGIAQSSCGTYDPRIRPWYVAASSGPKNVVIVLDVSGSMSQYGRLDLAKEAAETVISSL 531 V AY RC++ T S+C+ + C S P+ C ++ +++ C C + D V +P ++A G + NPT+ ++IET CY++L +R Y+ + +V + YFGA G+FR PG CG YDPR+RPW+VAASSGPK+VV+VLDVSGSMS YGR+DLAKEAA TVI +L Sbjct: 105 VENAYTQRCSIETLSQCSRGSFNGCSSVFPNQQCMAADELVVEACGGGSGGGCNALWDKTTSIVSIPSALAQGKDDNPTDPELIETACYTLLAEDYMRTKYENDEIFWDSYNVQPSWTYFGAHNGLFRKLPGTVDEECGNYDPRLRPWFVAASSGPKDVVLVLDVSGSMSDYGRMDLAKEAAITVIKTL 293
BLAST of mRNA_M-pyrifera_M_contig8257.19297.1 vs. uniprot
Match: A0A7S4NES1_9STRA (Hypothetical protein n=2 Tax=Odontella aurita TaxID=265563 RepID=A0A7S4NES1_9STRA) HSP 1 Score: 131 bits (329), Expect = 3.370e-32 Identity = 79/187 (42.25%), Postives = 107/187 (57.22%), Query Frame = 1 Query: 13 YGLRC-AVTESECANLHLDACRSRLPSGVCTQSEILDI--CADE---ECGMVRDFDNPSVRLPESVANGANLNPTNEDVIETMCYSVLLNTPLRDLYDTASS------VGSNAVYFGAWTGVFRYFPGIAQSSCGTYDPRIRPWYVAASSGPKNVVIVLDVSGSMSQ-YGR-LDLAKEAAETVISSL 531 Y RC A + C D C S P C E L I CA+ +CG + D+ +VR+P+ +A+G N NPT++ V+ET+CYS L + Y+T + V +YFG+ G FR FPG CGTYDPR+RPWY+A SSGPKNVV+V+D SGSM GR + L +EAA ++ +L Sbjct: 55 YANRCDADSLDACKAASYDMCSSEYPFQTCRADEQLTIPACAEGSAGKCGGLFDYTTSTVRIPKDLADGMNGNPTDKTVVETVCYSRPLTDWMVGKYETDKTYWERLGVKEPQMYFGSHDGAFRIFPGRHSPECGTYDPRLRPWYIAGSSGPKNVVLVVDTSGSMGGGTGRKIKLLREAATLIVKTL 241
BLAST of mRNA_M-pyrifera_M_contig8257.19297.1 vs. uniprot
Match: K0TQX2_THAOC (VWFA domain-containing protein n=1 Tax=Thalassiosira oceanica TaxID=159749 RepID=K0TQX2_THAOC) HSP 1 Score: 129 bits (324), Expect = 1.670e-31 Identity = 81/187 (43.32%), Postives = 105/187 (56.15%), Query Frame = 1 Query: 1 VLEAYGLRC-AVTESECANLHLDACRSRLPSGVCTQSEILDICADEE---CGMVRDFDNPSVRLPESVANGANLNPTNEDVIETMCYSVLLNTPLRDLYDTASS----VGSNAV--YFGAWTGVFRYFPGIAQSSCGTYDPRIRPWYVAASSGPKNVVIVLDVSGSMSQYGRLDLAKEAAETVISSL 531 V AY RC T C+ L +C S +G CT E L I A +E C + D + +V LP + + +VIET+CYS+L + + ++ + GS YFGA G+FR P Q CG YDPR RPWYVAASSGPK+V++V+DVSGSM +GRL LAKEAA TVI +L Sbjct: 47 VERAYSRRCETATLHGCSRASLSSCSSSFSNGQCTTEEELSIPACDEGAYCSSLWDAQSSAVSLPSFLDQ-------DPEVIETICYSLLAEPFMVESFERDTEWHARYGSYPSWRYFGAHDGIFRKIPAHHQEVCGEYDPRKRPWYVAASSGPKDVILVIDVSGSMGNHGRLSLAKEAATTVIETL 226
BLAST of mRNA_M-pyrifera_M_contig8257.19297.1 vs. uniprot
Match: B7G9V1_PHATC (Predicted protein (Fragment) n=1 Tax=Phaeodactylum tricornutum (strain CCAP 1055/1) TaxID=556484 RepID=B7G9V1_PHATC) HSP 1 Score: 123 bits (309), Expect = 1.300e-29 Identity = 70/183 (38.25%), Postives = 107/183 (58.47%), Query Frame = 1 Query: 13 YGLRC-AVTESECANLHLDACRSRLPSGVCTQSEILDI--CADE-ECGMVRDFDNPSVRLPESVANGANLNPTNEDVIETMCYSVLLNTPL------RDLYDTASSVGSNAVYFGAWTGVFRYFPGIAQSSCGTYDPRIRPWYVAASSGPKNVVIVLDVSGSMSQYGRLDLAKEAAETVISSL 531 Y RC ++ +CA + C S P+ C E L++ C D C + D+ + RL +++ + A+ NP++ +VIET+C++ L+ + Y + + + +YFG+ G FR +P +CG YDPR+RPWY+AASSGPKNVV+VLD SGSM+ RL L K+AA+ VI +L Sbjct: 49 YQKRCNEISLRQCARGSYNECTSLYPNQTCPGGEDLNVAQCGDGVSCSGLWDYSISNTRLHQNLVDSADGNPSDPNVIETICFTQQLDEFFVQKRAEQKPYWDSLGLRTPQMYFGSQNGAFRIYPARQSETCGVYDPRLRPWYIAASSGPKNVVLVLDTSGSMTDGNRLSLLKQAAKQVIETL 231
BLAST of mRNA_M-pyrifera_M_contig8257.19297.1 vs. uniprot
Match: A0A7S3P4E5_9STRA (Hypothetical protein n=1 Tax=Amphora coffeiformis TaxID=265554 RepID=A0A7S3P4E5_9STRA) HSP 1 Score: 124 bits (310), Expect = 1.410e-29 Identity = 71/167 (42.51%), Postives = 97/167 (58.08%), Query Frame = 1 Query: 70 CRSRLPSGVCTQSEILDICA-------DEECGMVRDFDNPSVRLPESVANGANLNPTNEDVIETMCYSVLLNTPLRDLYDTASSVGSN------AVYFGAWTGVFRYFPGIAQSSCGTYDPRIRPWYVAASSGPKNVVIVLDVSGSMSQYGRLDLAKEAAETVISSL 531 C+S P C E I A D +C + DF +VR+P +A+G NPT++ VIET+CY+ ++ L+ +T + N A YFG+ G FR +P CG YDPR+RPWYVAASSGPKNV++VLD SGSM R+DL K+AA+ V+ +L Sbjct: 137 CQSVFPDPQCLGGESYQISACGNGSIADNQCSGLYDFSVSNVRIPAELADGPFGNPTDKQVIETICYTQAMDEFLQAKRETDKAYWENIGVEPRAWYFGSSVGSFRIWPARPGDDCGQYDPRVRPWYVAASSGPKNVIMVLDTSGSMLGL-RMDLLKQAAKRVVDTL 302
BLAST of mRNA_M-pyrifera_M_contig8257.19297.1 vs. uniprot
Match: A0A8J9TQH8_PHATR (Hypothetical protein (Fragment) n=2 Tax=Phaeodactylum tricornutum TaxID=2850 RepID=A0A8J9TQH8_PHATR) HSP 1 Score: 117 bits (294), Expect = 1.820e-29 Identity = 67/183 (36.61%), Postives = 101/183 (55.19%), Query Frame = 1 Query: 13 YGLRCAVTESE-CANLHLDACRSRLPSGVCTQSEILDI--CADE-ECGMVRDFDNPSVRLPESVANGANLNPTNEDVIETMCYSVLLNTPL------RDLYDTASSVGSNAVYFGAWTGVFRYFPGIAQSSCGTYDPRIRPWYVAASSGPKNVVIVLDVSGSMSQYGRLDLAKEAAETVISSL 531 Y RC+ E CA + + C S P+ C + L++ C D C + D+ + RL + + NP++ +VIET+C++ L+ + Y + + +YFG+ G FR +P +CG +DPR+RPWY+AASSGPKNVV+VLD S SM+ RL L K+AA+ VI +L Sbjct: 49 YQTRCSEASMEACARANYNECTSLYPNQTCPGGQDLNVAQCGDGVSCASLWDYSVSNTRLHTDLIGASGGNPSDPNVIETVCFTQQLDEFFIRKRAEQKPYWDRLGLRTPQMYFGSQNGAFRIYPARQSETCGAFDPRVRPWYIAASSGPKNVVLVLDTSNSMTDKSRLALLKQAAKQVIKTL 231
BLAST of mRNA_M-pyrifera_M_contig8257.19297.1 vs. uniprot
Match: K0R0F1_THAOC (VWFA domain-containing protein n=1 Tax=Thalassiosira oceanica TaxID=159749 RepID=K0R0F1_THAOC) HSP 1 Score: 120 bits (301), Expect = 1.880e-28 Identity = 65/164 (39.63%), Postives = 95/164 (57.93%), Query Frame = 1 Query: 13 YGLRCAV-TESECANLHLDACRSRLPSGVCTQSEILDICA----DEECGMVRDFDNPSVRLPESVANGANLNPTNEDVIETMCYSVLLNTPLRDLYDTASSVGSNAVYFGAWTGVFRYFPGIAQSSCGTYDPRIRPWYVAASSGPKNVVIVLDVSGSMSQYGRL 489 Y RC + T ++C + + C S P+ +C S + + A C + D +VR+P +ANG NP+++D++E++CYS L + Y ++ N +Y+G+ TG R P CG YDPR RPW+VAASSGPK+VVIV+DVSGSM YGR+ Sbjct: 52 YQNRCDIETLNQCGRSNFNDCTSTYPNQMCMDSSEMLVSACGSGSNGCNALWDKTQTAVRIPARLANGQGGNPSDDDLVESICYS-----RLAEPYMIKNNQDGNQMYYGSATGSLRIIPAQHSEVCGLYDPRRRPWFVAASSGPKDVVIVMDVSGSMEDYGRM 210
BLAST of mRNA_M-pyrifera_M_contig8257.19297.1 vs. uniprot
Match: A0A7R9U062_9VIRI (Hypothetical protein n=1 Tax=Prasinoderma coloniale TaxID=156133 RepID=A0A7R9U062_9VIRI) HSP 1 Score: 120 bits (300), Expect = 3.020e-28 Identity = 69/185 (37.30%), Postives = 102/185 (55.14%), Query Frame = 1 Query: 1 VLEAYGLRCAVTESECANLHLDACRSRLPSGVCTQSEILDICADEECGMVRDFDNPSVRLPES-VANGANLNPTNEDVIETMCYSVLLNTPLRDLYDTASSVGSNAV-------YFGAWTGVFRYFPGIAQSSCGTYDPRIRPWYVAASSGPKNVVIVLDVSGSMSQYGRLDLAKEAAETVISSL 531 V + Y RCA++ + C + C + ++ + I CG V DF +VR+P++ ++NG +P + ET+CY+ N + A V + +V YFGA G+FR++P CG YDPR+RPW+ AASSGPK+VV+VLD+SGSM R LAK+AA V++SL Sbjct: 28 VEKQYARRCALSANSCKEAAYEGCVTSYTDQAECSADYIKIGECGSCGAVFDFTTSNVRIPKAYMSNGPGSSPDTPSLKETVCYT---NAITDFMVRQAEEVKAGSVFQEIPQTYFGAHNGLFRFYPARQTGVCGGYDPRVRPWFTAASSGPKDVVLVLDISGSMHFQNRWSLAKQAAIAVLNSL 209
BLAST of mRNA_M-pyrifera_M_contig8257.19297.1 vs. uniprot
Match: A0A7R9VYY4_9STRA (Hypothetical protein n=1 Tax=Pseudictyota dubia TaxID=2749911 RepID=A0A7R9VYY4_9STRA) HSP 1 Score: 116 bits (290), Expect = 5.440e-27 Identity = 72/195 (36.92%), Postives = 106/195 (54.36%), Query Frame = 1 Query: 1 VLEAYGLRCAV-TESECANLHLDACRSRLPSGVCTQSE--ILDICADEE-CGMVRDFDNPSVRLPESVANGANLNPTNEDVIETMCYSVLLNTPLRDLYDTASSVGSN-------AVYFGAWTGVFRYFPGIAQSSCGTYDPRIR-------PWYVAASSGPKNVVIVLDVSGSMSQYGRLDLAKEAAETVISSL 531 V AY RC+ T + C + D C S P+ C S+ ++ C E C + D+ +VRLP ++A+G NPT+ +IET+CYS + L++L+ S + A+YFG G FR FPG +SCG YDPR R PWY++ SSG K+VV+++D S S+ +L L + A+ +ISSL Sbjct: 15 VESAYNSRCSSNTLNTCQKNNYDECSSLYPNQTCPSSDFAVISQCGKGELCNGLFDWSVSTVRLPRALADGPGNNPTDPQIIETICYSRQTDNFLKNLFGRNDSFWEDRGMSYRPAMYFGGADGAFRIFPGRQSASCGAYDPRSRAWYLAAVPWYISESSGGKDVVLIVDNSKSVGDDYKLSLFQNASRQIISSL 209 The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig8257.19297.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_M-pyrifera_M_contig8257.19297.1 >prot_M-pyrifera_M_contig8257.19297.1 ID=prot_M-pyrifera_M_contig8257.19297.1|Name=mRNA_M-pyrifera_M_contig8257.19297.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=178bp VLEAYGLRCAVTESECANLHLDACRSRLPSGVCTQSEILDICADEECGMVback to top mRNA from alignment at M-pyrifera_M_contig8257:6977..11598+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_M-pyrifera_M_contig8257.19297.1 ID=mRNA_M-pyrifera_M_contig8257.19297.1|Name=mRNA_M-pyrifera_M_contig8257.19297.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=4622bp|location=Sequence derived from alignment at M-pyrifera_M_contig8257:6977..11598+ (Macrocystis pyrifera P11B4 male)back to top Coding sequence (CDS) from alignment at M-pyrifera_M_contig8257:6977..11598+ >mRNA_M-pyrifera_M_contig8257.19297.1 ID=mRNA_M-pyrifera_M_contig8257.19297.1|Name=mRNA_M-pyrifera_M_contig8257.19297.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=1068bp|location=Sequence derived from alignment at M-pyrifera_M_contig8257:6977..11598+ (Macrocystis pyrifera P11B4 male)back to top |