mRNA_M-pyrifera_M_contig82522.19288.1 (mRNA) Macrocystis pyrifera P11B4 male
Overview
Homology
BLAST of mRNA_M-pyrifera_M_contig82522.19288.1 vs. uniprot
Match: UPI001FB1523E (uncharacterized protein LOC124912142 n=1 Tax=Impatiens glandulifera TaxID=253017 RepID=UPI001FB1523E) HSP 1 Score: 60.1 bits (144), Expect = 1.400e-8 Identity = 35/99 (35.35%), Postives = 59/99 (59.60%), Query Frame = 1 Query: 1 GKNVVVLFSHGLLNNANSSTVCSIAGAVREAGFACCRFDSATTSTGQTQNAEFTYGGYNEDVEDLQTVVEALHDGMDGLPPLKVACLLGHSKGGNNIIL 297 G +V+ HG + ++T+ ++A A+ E G + RFD + G+++ F YG Y+ +VEDL++VV+ + G LK + +LGHSKGGN ++L Sbjct: 36 GSKELVILCHGFRSTKETTTISNLAVALAEEGISSFRFDFS--GNGESEGT-FQYGHYHREVEDLRSVVQFFNGGN-----LKASTILGHSKGGNVVLL 126
BLAST of mRNA_M-pyrifera_M_contig82522.19288.1 vs. uniprot
Match: A0A833R8C4_9POAL (Alpha/beta hydrolase family n=1 Tax=Carex littledalei TaxID=544730 RepID=A0A833R8C4_9POAL) HSP 1 Score: 60.5 bits (145), Expect = 1.460e-8 Identity = 36/99 (36.36%), Postives = 54/99 (54.55%), Query Frame = 1 Query: 1 GKNVVVLFSHGLLNNANSSTVCSIAGAVREAGFACCRFDSATTSTGQTQNAEFTYGGYNEDVEDLQTVVEALHDGMDGLPPLKVACLLGHSKGGNNIIL 297 G N +V+ HG ++ S T+C + A+ G + RFD + G+++ F YG Y ++VEDL+TVV + V +LGHSKGGN +IL Sbjct: 160 GSNELVILCHGFRSSKESKTICHLGDALASKGISSFRFDFS--GNGESEG-NFEYGNYYKEVEDLRTVVRFFRE-----QNRDVTAILGHSKGGNVVIL 250
BLAST of mRNA_M-pyrifera_M_contig82522.19288.1 vs. uniprot
Match: A0A1Y1II24_KLENI (Esterase/lipase/thioesterase family protein n=1 Tax=Klebsormidium nitens TaxID=105231 RepID=A0A1Y1II24_KLENI) HSP 1 Score: 58.9 bits (141), Expect = 3.470e-8 Identity = 38/95 (40.00%), Postives = 57/95 (60.00%), Query Frame = 1 Query: 13 VVLFSHGLLNNANSSTVCSIAGAVREAGFACCRFDSATTSTGQTQNAEFTYGGYNEDVEDLQTVVEALHDGMDGLPPLKVACLLGHSKGGNNIIL 297 VV+ HG L++ SST+ +I + EAGF RFD + G++ EF +G Y ++VEDL++VV + G+ V +LGHSKGG+ +IL Sbjct: 33 VVILCHGFLSSKRSSTLQTIVPGLVEAGFGVLRFDFS--GNGES-GGEFEFGNYWKEVEDLRSVVGFVR----GVKKRSVKAVLGHSKGGDVVIL 120
BLAST of mRNA_M-pyrifera_M_contig82522.19288.1 vs. uniprot
Match: A0A0V0HUD7_SOLCH (Putative ovule protein n=1 Tax=Solanum chacoense TaxID=4108 RepID=A0A0V0HUD7_SOLCH) HSP 1 Score: 57.8 bits (138), Expect = 1.020e-7 Identity = 34/99 (34.34%), Postives = 57/99 (57.58%), Query Frame = 1 Query: 1 GKNVVVLFSHGLLNNANSSTVCSIAGAVREAGFACCRFDSATTSTGQTQNAEFTYGGYNEDVEDLQTVVEALHDGMDGLPPLKVACLLGHSKGGNNIIL 297 G +V+ HG ++ + +T+ ++AGA+ + G + RFD G+++ + F YG Y + +DL +VVE + LKV +LGHSKGGN ++L Sbjct: 30 GSMEIVVLCHGFRSSKDFNTMVNLAGALEKEGISVFRFDFP--GNGESEGS-FQYGNYRSEADDLHSVVEYFNGAN-----LKVTAVLGHSKGGNVVLL 120
BLAST of mRNA_M-pyrifera_M_contig82522.19288.1 vs. uniprot
Match: A0A1W0VY50_SORBI (Hydrolase_4 domain-containing protein n=3 Tax=Andropogoneae TaxID=147429 RepID=A0A1W0VY50_SORBI) HSP 1 Score: 57.0 bits (136), Expect = 1.830e-7 Identity = 32/99 (32.32%), Postives = 54/99 (54.55%), Query Frame = 1 Query: 1 GKNVVVLFSHGLLNNANSSTVCSIAGAVREAGFACCRFDSATTSTGQTQNAEFTYGGYNEDVEDLQTVVEALHDGMDGLPPLKVACLLGHSKGGNNIIL 297 G N +V+ HG +++ N S + +A A+ + G + RFD + + Q F YG Y ++ +DL +VV L+ +A ++GHSKGG+ +IL Sbjct: 37 GSNKIVVLCHGFISSKNDSLILDLAAALTKEGISVFRFDFSGNGESEGQ---FEYGNYRKEADDLHSVVLYLYQ-----KSYDIAAVVGHSKGGDVVIL 127
BLAST of mRNA_M-pyrifera_M_contig82522.19288.1 vs. uniprot
Match: B3VW20_POPTN (Esterase/lipase/thioesterase (Fragment) n=18 Tax=Populus tremula TaxID=113636 RepID=B3VW20_POPTN) HSP 1 Score: 55.5 bits (132), Expect = 3.620e-7 Identity = 31/99 (31.31%), Postives = 55/99 (55.56%), Query Frame = 1 Query: 1 GKNVVVLFSHGLLNNANSSTVCSIAGAVREAGFACCRFDSATTSTGQTQNAEFTYGGYNEDVEDLQTVVEALHDGMDGLPPLKVACLLGHSKGGNNIIL 297 G N +V+ HG + + + ++A A+ + G + RFD A G+++ + F+YG Y + +DL+ V+E P V+ +LGHSKGG+ ++L Sbjct: 49 GSNDIVILCHGFCSTKENDIMVNLAKALEKEGISAFRFDLA--GNGESEGS-FSYGNYRREADDLRAVIEHFRGAS---PSRGVSAILGHSKGGDVVLL 141
BLAST of mRNA_M-pyrifera_M_contig82522.19288.1 vs. uniprot
Match: A0A803MRP8_CHEQI (Hydrolase_4 domain-containing protein n=1 Tax=Chenopodium quinoa TaxID=63459 RepID=A0A803MRP8_CHEQI) HSP 1 Score: 55.1 bits (131), Expect = 7.630e-7 Identity = 35/99 (35.35%), Postives = 57/99 (57.58%), Query Frame = 1 Query: 1 GKNVVVLFSHGLLNNANSSTVCSIAGAVREAGFACCRFDSATTSTGQTQNAEFTYGGYNEDVEDLQTVVEALHDGMDGLPPLKVACLLGHSKGGNNIIL 297 G VV+ HG ++ T+ +I GA+ + G + RFD + G++ A F YG Y ++ EDL+ VV+ + G + + V+ +LGHSKGGN ++L Sbjct: 30 GSKDVVVVCHGFKSSKEQETMVNICGALEKEGISAYRFDFS--GNGESDGA-FAYGNYMKEAEDLRAVVKNFN-GANRI----VSAILGHSKGGNVVLL 120
BLAST of mRNA_M-pyrifera_M_contig82522.19288.1 vs. uniprot
Match: UPI000B78E3F7 (uncharacterized protein LOC110683064 n=1 Tax=Chenopodium quinoa TaxID=63459 RepID=UPI000B78E3F7) HSP 1 Score: 55.5 bits (132), Expect = 7.880e-7 Identity = 35/99 (35.35%), Postives = 55/99 (55.56%), Query Frame = 1 Query: 1 GKNVVVLFSHGLLNNANSSTVCSIAGAVREAGFACCRFDSATTSTGQTQNAEFTYGGYNEDVEDLQTVVEALHDGMDGLPPLKVACLLGHSKGGNNIIL 297 G VV+ HG ++ T+ I GA+ + G + RFD + G + A F YG Y ++ ED++ VV+ H G + + V+ +LGHSKGGN ++L Sbjct: 82 GSKDVVVVCHGFKSSKEQETMVDICGALEKEGISAYRFDFS--GNGDSDGA-FAYGNYVKEAEDIRAVVKHFH-GANRI----VSAILGHSKGGNVVLL 172
BLAST of mRNA_M-pyrifera_M_contig82522.19288.1 vs. uniprot
Match: A0A803MGF1_CHEQI (Uncharacterized protein n=1 Tax=Chenopodium quinoa TaxID=63459 RepID=A0A803MGF1_CHEQI) HSP 1 Score: 55.5 bits (132), Expect = 8.830e-7 Identity = 35/99 (35.35%), Postives = 55/99 (55.56%), Query Frame = 1 Query: 1 GKNVVVLFSHGLLNNANSSTVCSIAGAVREAGFACCRFDSATTSTGQTQNAEFTYGGYNEDVEDLQTVVEALHDGMDGLPPLKVACLLGHSKGGNNIIL 297 G VV+ HG ++ T+ I GA+ + G + RFD + G + A F YG Y ++ ED++ VV+ H G + + V+ +LGHSKGGN ++L Sbjct: 312 GSKDVVVVCHGFKSSKEQETMVDICGALEKEGISAYRFDFS--GNGDSDGA-FAYGNYVKEAEDIRAVVKHFH-GANRI----VSAILGHSKGGNVVLL 402
BLAST of mRNA_M-pyrifera_M_contig82522.19288.1 vs. uniprot
Match: A0A0D3BHV0_BRAOL (Hydrolase_4 domain-containing protein n=10 Tax=Brassica TaxID=3705 RepID=A0A0D3BHV0_BRAOL) HSP 1 Score: 55.1 bits (131), Expect = 9.100e-7 Identity = 32/99 (32.32%), Postives = 59/99 (59.60%), Query Frame = 1 Query: 1 GKNVVVLFSHGLLNNANSSTVCSIAGAVREAGFACCRFDSATTSTGQTQNAEFTYGGYNEDVEDLQTVVEALHDGMDGLPPLKVACLLGHSKGGNNIIL 297 G VV+ HG +N N + + S+A A+ + G + RFD + G+++ + F +G YN + +DL++V++ + + + PL +LGHSKGG+ ++L Sbjct: 35 GSTEVVVLCHGFRSNKNDTVMKSVAAAIEKEGISAFRFDFS--GNGESEGS-FYFGNYNHEADDLRSVIQHFSN-FNRVVPL----ILGHSKGGDVVLL 125 The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig82522.19288.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_M-pyrifera_M_contig82522.19288.1 >prot_M-pyrifera_M_contig82522.19288.1 ID=prot_M-pyrifera_M_contig82522.19288.1|Name=mRNA_M-pyrifera_M_contig82522.19288.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=99bp GKNVVVLFSHGLLNNANSSTVCSIAGAVREAGFACCRFDSATTSTGQTQNback to top mRNA from alignment at M-pyrifera_M_contig82522:615..911+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_M-pyrifera_M_contig82522.19288.1 ID=mRNA_M-pyrifera_M_contig82522.19288.1|Name=mRNA_M-pyrifera_M_contig82522.19288.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=297bp|location=Sequence derived from alignment at M-pyrifera_M_contig82522:615..911+ (Macrocystis pyrifera P11B4 male)back to top Coding sequence (CDS) from alignment at M-pyrifera_M_contig82522:615..911+ >mRNA_M-pyrifera_M_contig82522.19288.1 ID=mRNA_M-pyrifera_M_contig82522.19288.1|Name=mRNA_M-pyrifera_M_contig82522.19288.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=594bp|location=Sequence derived from alignment at M-pyrifera_M_contig82522:615..911+ (Macrocystis pyrifera P11B4 male)back to top |