mRNA_M-pyrifera_M_contig82519.19286.1 (mRNA) Macrocystis pyrifera P11B4 male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_M-pyrifera_M_contig82519.19286.1
Unique NamemRNA_M-pyrifera_M_contig82519.19286.1
TypemRNA
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Homology
BLAST of mRNA_M-pyrifera_M_contig82519.19286.1 vs. uniprot
Match: A0A2D6BTH8_9DELT (Acyl-CoA synthetase n=1 Tax=Deltaproteobacteria bacterium TaxID=2026735 RepID=A0A2D6BTH8_9DELT)

HSP 1 Score: 300 bits (769), Expect = 6.740e-96
Identity = 155/296 (52.36%), Postives = 208/296 (70.27%), Query Frame = 1
Query:    4 VIPAPLFHAWGLSQLMVAATLAGTAVLPGAFDPAAVMGLVEEHRATVLAAVPVMLHRILDAGTST----DSSSLRITASSGSALPGDLAERWMNATGDHLYSLYGSTEVGQVAVATPVDLRHATGTAGRPLPGIRVKLIDHDQSEVPTGEVGKIMVASSMHFDGYTGGGTKAIVDDHMEIGDQGYFDADGRLFVVGRADDMIISGGENVYPSNIEASLLRHPLVIEAVVLGVPDEDFGQRIRAVIVTSDGQGSGRRTASIKRHLQSELANYEVPRDFVYVEVLPRNAAGKVLRSAL 879
            ++ AP FH+WG   +++AA L  TA+L   FDP A +  ++EHR  VLA VPVM+ RIL  G       D+SSL +  +SGSALPG+LA RWMN  GD++Y+LYGSTEV Q ++A P +LR A GTAGRP  G  V+++D +  EVPTG  G+I VA+++ F+GYTGGG K I+D  M  GD G+FD +GRLFV GR DDMIISGGENV+P  +E  L  H  V+EA V+GVPD++FGQR++A  V  +G  S    A++K H+++ LANY+VPR+ V+++ LPRN  GKVL+  L
Sbjct:  203 LVVAPTFHSWGGMHMLLAAQLGATAILHRRFDPEATLASIQEHRPQVLAVVPVMMQRILALGDEVIGKYDTSSLEMVCASGSALPGELALRWMNTFGDNIYNLYGSTEVAQASIAMPDELRAAPGTAGRPPRGAVVRILDDEGKEVPTGTTGRIFVANAVQFEGYTGGGNKEIIDGLMSSGDVGHFDEEGRLFVDGRDDDMIISGGENVFPREVEDLLADHDDVMEAAVIGVPDDEFGQRLKAFAVLREGAASDE--AALKAHIKNSLANYKVPREIVFLDALPRNPTGKVLKRQL 496          
BLAST of mRNA_M-pyrifera_M_contig82519.19286.1 vs. uniprot
Match: A0A6G0A844_9ACTN (Acyl-CoA synthetase n=2 Tax=Bacteria TaxID=2 RepID=A0A6G0A844_9ACTN)

HSP 1 Score: 288 bits (738), Expect = 8.590e-91
Identity = 157/296 (53.04%), Postives = 201/296 (67.91%), Query Frame = 1
Query:    4 VIPAPLFHAWGLSQLMVAATLAGTAVLPGAFDPAAVMGLVEEHRATVLAAVPVMLHRILDAGTST----DSSSLRITASSGSALPGDLAERWMNATGDHLYSLYGSTEVGQVAVATPVDLRHATGTAGRPLPGIRVKLIDHDQSEVPTGEVGKIMVASSMHFDGYTGGGTKAIVDDHMEIGDQGYFDADGRLFVVGRADDMIISGGENVYPSNIEASLLRHPLVIEAVVLGVPDEDFGQRIRAVIVTSDGQGSGRRTASIKRHLQSELANYEVPRDFVYVEVLPRNAAGKVLRSAL 879
            V+PAPLFHAWGL  LMVAA+     VL   FD    + LV+ + ATVLA VPVML RIL   T+     D+S+LRI ASSG+ALPG LA  WM+  GD+LY+LYGSTEV Q  +A+P D+R A GTAGRP  G  VK++D    EVP GE+G+I V + + FDGYTGGG K +V   M  GD GY D DGRLFV GR DDMI+SGGENV+P  +E  L  +P V +  V+GV DE+FGQR++A +V   G G+     S+  H+++ LA Y++PR+ V+++ LPRN  GKVL+  L
Sbjct:  242 VVPAPLFHAWGLGHLMVAASGGCCLVLCRRFDAEKTLELVDRYGATVLAVVPVMLQRILGLDTAVINRHDTSTLRIVASSGAALPGGLAVEWMDTFGDNLYNLYGSTEVAQATIASPEDMRAAPGTAGRPPVGTVVKILDSAGQEVPQGEIGRIFVGNRLQFDGYTGGGGKEMVGGLMSTGDMGYVDEDGRLFVGGRDDDMIVSGGENVFPREVEDLLSAYPGVDDVAVIGVDDEEFGQRLKAFVV--QGPGADLSDRSLLDHVKASLARYKIPREVVFLDELPRNPTGKVLKRKL 535          
BLAST of mRNA_M-pyrifera_M_contig82519.19286.1 vs. uniprot
Match: A0A2W5ZHT3_9ACTN (Acyl-CoA synthetase (Fragment) n=1 Tax=Solirubrobacterales bacterium TaxID=1909295 RepID=A0A2W5ZHT3_9ACTN)

HSP 1 Score: 280 bits (717), Expect = 2.530e-90
Identity = 155/295 (52.54%), Postives = 196/295 (66.44%), Query Frame = 1
Query:    7 IPAPLFHAWGLSQLMVAATLAGTAVLPGAFDPAAVMGLVEEHRATVLAAVPVMLHRILDAGTST----DSSSLRITASSGSALPGDLAERWMNATGDHLYSLYGSTEVGQVAVATPVDLRHATGTAGRPLPGIRVKLIDHDQSEVPTGEVGKIMVASSMHFDGYTGGGTKAIVDDHMEIGDQGYFDADGRLFVVGRADDMIISGGENVYPSNIEASLLRHPLVIEAVVLGVPDEDFGQRIRAVIVTSDGQGSGRRTASIKRHLQSELANYEVPRDFVYVEVLPRNAAGKVLRSAL 879
            I APLFH+WG +   +   L+ T VL   FDP A + L  +HR   L  VPVML RIL+    T    D S+LR+ A+SGSALPG+LA + M+  GD LY+LYGSTEV  V +ATP DLR A GTAGRP  G  +KL+D    EV  G+ G+I V + M F+GYTGGG K ++D  M  GD G+ D  GRLFV GR DDMI+SGGENV+P  +E  L  HP V EA V+GVPDE FGQR++A +VT  G+ S      +K H++S LANY+VPR+ V+++ LPRNA GKVL+  L
Sbjct:   29 IAAPLFHSWGFAHFTLGLALSSTIVLRRKFDPEATLSLSAQHRCQTLVVVPVMLQRILELPRDTIERYDLSALRVIAASGSALPGELAIKVMDTFGDVLYNLYGSTEVAWVTIATPEDLRAAPGTAGRPPRGTILKLLDEQGKEVAAGDTGRIFVTNEMLFEGYTGGGNKDVIDGLMSTGDVGHLDRGGRLFVDGRDDDMIVSGGENVFPREVEDLLADHPKVDEAAVVGVPDEKFGQRLKAYVVTR-GKASISE-GDLKAHVKSNLANYKVPREIVFLKELPRNATGKVLKREL 321          
BLAST of mRNA_M-pyrifera_M_contig82519.19286.1 vs. uniprot
Match: UPI001CC821B4 (AMP-binding protein n=1 Tax=Nocardioides sp. GBK3QG-3 TaxID=2874580 RepID=UPI001CC821B4)

HSP 1 Score: 285 bits (730), Expect = 1.550e-89
Identity = 150/295 (50.85%), Postives = 194/295 (65.76%), Query Frame = 1
Query:    7 IPAPLFHAWGLSQLMVAATLAGTAVLPGAFDPAAVMGLVEEHRATVLAAVPVMLHRILDAGTST----DSSSLRITASSGSALPGDLAERWMNATGDHLYSLYGSTEVGQVAVATPVDLRHATGTAGRPLPGIRVKLIDHDQSEVPTGEVGKIMVASSMHFDGYTGGGTKAIVDDHMEIGDQGYFDADGRLFVVGRADDMIISGGENVYPSNIEASLLRHPLVIEAVVLGVPDEDFGQRIRAVIVTSDGQGSGRRTASIKRHLQSELANYEVPRDFVYVEVLPRNAAGKVLRSAL 879
            I APLFH WG + L +A  L  T VL   FDP A + ++E  R   +A +PVML RIL     T    D S +++ ASSGSALPGDLA  WM+  GDHLY++YGSTEV   ++ATP DLR     AG+P     VK++D D +EVP GE G+I V + + F+GYTGGG+K +VD  M  GD G FDADGRL V GR D+MI+SGGENV+P  +E SL+RH  V+E   +GV D DFG+R+RA +V  DG  +G     ++ H++  LA Y+VPRD V++  LPRNA GKVL+  L
Sbjct:  246 IAAPLFHTWGFAHLALAMLLNSTMVLRRRFDPEACLQVIESERCDSVAVIPVMLQRILTLPEETLARYDLSRVKVVASSGSALPGDLAIDWMDHFGDHLYNIYGSTEVAYASIATPEDLRADPAAAGKPPYATVVKILDPDGTEVPAGETGRIFVGNGLLFEGYTGGGSKEVVDGLMSTGDVGRFDADGRLHVEGRDDEMIVSGGENVFPKEVEDSLMRHEAVVEVAAVGVDDPDFGKRLRAYVVVRDGVETGTLEDELRAHVKDNLARYKVPRDIVFLPELPRNATGKVLKREL 540          
BLAST of mRNA_M-pyrifera_M_contig82519.19286.1 vs. uniprot
Match: A0A857KHA3_9ACTN (AMP-binding protein n=2 Tax=Gordonia amarae TaxID=36821 RepID=A0A857KHA3_9ACTN)

HSP 1 Score: 289 bits (740), Expect = 1.980e-89
Identity = 156/296 (52.70%), Postives = 200/296 (67.57%), Query Frame = 1
Query:    7 IPAPLFHAWGLSQLMVAATLAGTAVLPGAFDPAAVMGLVEEHRATVLAAVPVMLHRIL----DAGTSTDSSSLRITASSGSALPGDLAERWMNATGDHLYSLYGSTEVGQVAVATPVDLRHATGTAGRPLPGIRVKLIDHDQSEVPTGEVGKIMVASSMHFDGYTGGGTKAIVDDHMEIGDQGYFDADGRLFVVGRADDMIISGGENVYPSNIEASLLRHPLVIEAVVLGVPDEDFGQRIRAVIVTSDGQGSGRRTAS-IKRHLQSELANYEVPRDFVYVEVLPRNAAGKVLRSAL 879
            + AP+FH WGLS L++   L  T V    FDP   +  +++H+   LA VPVML RIL    D     D+SSL +  +SGSALPGDL++RWM A G++LY+LYGSTEV    +ATP D+R A GTAG+P  G  +KL+D + SEVP GEVG+I V +S  FDGY+GGG K   +  M  GD G FDA GRLFVVGR DDMI+SGGENV+P  +E ++ RHP V +   +GV DE FGQR+RA +V  +GQ   + TA  +K  ++SELA Y+VPRD  +V+ LPRNA GKVLR  L
Sbjct:  399 LAAPVFHTWGLSNLLLGLGLGCTLVCVRKFDPEQWLATIDQHKVQALAVVPVMLQRILELPGDVRQQYDTSSLTVVTASGSALPGDLSDRWMTAFGENLYNLYGSTEVANATIATPEDMRRAPGTAGKPTRGTTIKLLDDNNSEVPQGEVGRIFVGNSQLFDGYSGGGDKQRRNGLMATGDVGRFDAAGRLFVVGRDDDMIVSGGENVFPKEVEDAISRHPSVADVAAIGVDDEKFGQRLRAFVVVREGQ---KVTADELKSLVKSELAGYKVPRDVEFVDELPRNATGKVLRRDL 691          
BLAST of mRNA_M-pyrifera_M_contig82519.19286.1 vs. uniprot
Match: A0A524MXY2_9ACTN (Acyl-CoA synthetase n=1 Tax=Acidimicrobiales bacterium TaxID=2201156 RepID=A0A524MXY2_9ACTN)

HSP 1 Score: 281 bits (720), Expect = 3.010e-88
Identity = 157/292 (53.77%), Postives = 195/292 (66.78%), Query Frame = 1
Query:    4 VIPAPLFHAWGLSQLMVAATLAGTAVLPGAFDPAAVMGLVEEHRATVLAAVPVMLHRIL--DAGTSTDSSSLRITASSGSALPGDLAERWMNATGDHLYSLYGSTEVGQVAVATPVDLRHATGTAGRPLPGIRVKLIDHDQSEVPTGEVGKIMVASSMHFDGYTGGGTKAIVDDHMEIGDQGYFDADGRLFVVGRADDMIISGGENVYPSNIEASLLRHPLVIEAVVLGVPDEDFGQRIRAVIVTSDGQGSGRRTASIKRHLQSELANYEVPRDFVYVEVLPRNAAGKVLRS 873
            VIP PLFHAWGL+QL VAA+   TAVL   F   A +  +E +RA VLA VPVML RIL  D   + D+SSL+I A SGSALP  +A  WM+  G++LY++YGSTEVGQ  +ATP DLR A GTAGR + G  V+++D D + VPTG  G I+V S   F  YTGGGTK  V   M  GD GYFDA GRLFV GRADDMI+SGGENV+P  IE  LL H  + +A V+GVPD +FGQR+ A +V + G         ++  + S LA ++VPRD  +V+ LPRN  GK+LR 
Sbjct:  228 VIPTPLFHAWGLAQLTVAASTGSTAVLVRRFAVGATLEAIESNRANVLAVVPVMLQRILAEDGPDARDTSSLQIVACSGSALPAAVATAWMDRYGENLYNVYGSTEVGQATLATPDDLRAAPGTAGRVIAGTVVEVVDADGNGVPTGGTGLIVVGSDAQFTEYTGGGTKERVRGLMSSGDVGYFDAQGRLFVTGRADDMIVSGGENVFPLEIEEVLLSHDDITDAAVVGVPDAEFGQRLAAFVVVNPGGSID--AGDVRAIVASRLARHKVPRDVTFVDELPRNTTGKLLRG 517          
BLAST of mRNA_M-pyrifera_M_contig82519.19286.1 vs. uniprot
Match: A0A537W537_9ACTN (Acyl-CoA synthetase n=1 Tax=Actinomycetia bacterium TaxID=1883427 RepID=A0A537W537_9ACTN)

HSP 1 Score: 281 bits (720), Expect = 3.620e-88
Identity = 157/296 (53.04%), Postives = 196/296 (66.22%), Query Frame = 1
Query:    4 VIPAPLFHAWGLSQLMVAATLAGTAVLPGAFDPAAVMGLVEEHRATVLAAVPVMLHRILDAGTST----DSSSLRITASSGSALPGDLAERWMNATGDHLYSLYGSTEVGQVAVATPVDLRHATGTAGRPLPGIRVKLIDHDQSEVPTGEVGKIMVASSMHFDGYTGGGTKAIVDDHMEIGDQGYFDADGRLFVVGRADDMIISGGENVYPSNIEASLLRHPLVIEAVVLGVPDEDFGQRIRAVIVTSDGQGSGRRTASIKRHLQSELANYEVPRDFVYVEVLPRNAAGKVLRSAL 879
            +I AP+FH+WG +   +A  LA T VL   FDP   +  V  HRA+ LA VPVML RILD G  T    D  +L++ A SGSALPGDLA R M+  G+ LY+LYGSTEV    +ATP DLR A GTAGRP  G  VKL+D +  EV   + G+I VA+ M FDGYTGGG K IV   M  GD G+FD  GRLFV GR D+MI+SGGENV+P  +E  L  H  + EA V+GVPDE+FGQR++A +V  DG     +   +KR+++  LA ++VPRD V+VE LPRNA GKVL+  L
Sbjct:  235 MIAAPMFHSWGFAHFTLALPLASTLVLRRKFDPEDTLRAVAHHRASALALVPVMLQRILDLGPETIARYDLHALKVVALSGSALPGDLATRTMDLLGEVLYNLYGSTEVAWATIATPADLRAAPGTAGRPPMGTVVKLLDGEGREVGPQKGGRIFVANEMMFDGYTGGGGKEIVGGLMSTGDVGHFDLAGRLFVDGRDDEMIVSGGENVFPREVEDLLADHEAIEEAAVVGVPDEEFGQRLKAFVVRRDGAELDEQ--DVKRYVKENLARFKVPRDIVFVEELPRNATGKVLKRVL 528          
BLAST of mRNA_M-pyrifera_M_contig82519.19286.1 vs. uniprot
Match: A0A6C7DZK6_ILUCY (Putative fatty-acid--CoA ligase n=1 Tax=Ilumatobacter coccineus (strain NBRC 103263 / KCTC 29153 / YM16-304) TaxID=1313172 RepID=A0A6C7DZK6_ILUCY)

HSP 1 Score: 280 bits (716), Expect = 1.600e-87
Identity = 150/293 (51.19%), Postives = 196/293 (66.89%), Query Frame = 1
Query:    7 IPAPLFHAWGLSQLMVAATLAGTAVLPGAFDPAAVMGLVEEHRATVLAAVPVMLHRILDAGT--STDSSSLRITASSGSALPGDLAERWMNATGDHLYSLYGSTEVGQVAVATPVDLRHATGTAGRPLPGIRVKLIDHDQSEVPTGEVGKIMVASSMHFDGYTGGGTKAIVDDHMEIGDQGYFDADGRLFVVGRADDMIISGGENVYPSNIEASLLRHPLVIEAVVLGVPDEDFGQRIRAVIVTSDGQGSGRRTASIKRHLQSELANYEVPRDFVYVEVLPRNAAGKVLRSAL 879
            + +PLFHAWGL+Q+ +AA L  T VL  +FDP A +  +E  R TVLA VP +L R+L +    STD SSLRI ASSGSALP  + E W++  G +LY+LYGSTEVGQ  +ATP DL HA  TAGR + G  ++++D   +EV TG +G+I V +   FDGYTGGG K +VD  M  GD GY D  G LFV GRADDMI+SGGENV+P  +E  LL HP V +  V+GV D+DFGQR+ A IV   G+   ++   ++  + + LA ++VPRD  +V+ LPR A GK+ RS L
Sbjct:  246 VTSPLFHAWGLAQMTLAAGLGATVVLAESFDPDATLAQIERERVTVLAVVPAILQRLLASPMLDSTDLSSLRIVASSGSALPVPVVEAWLDRVGPNLYNLYGSTEVGQATLATPDDLAHAPSTAGRVMRGSTIRILDESGAEVATGSIGRIFVGNGAQFDGYTGGGGKEVVDGLMSSGDVGYVDDGGLLFVTGRADDMIVSGGENVFPREVEDLLLAHPAVADVAVVGVDDDDFGQRLAAHIVKEPGRKITKK--QVRELVGANLARHKVPRDVHFVDELPRTATGKIRRSRL 536          
BLAST of mRNA_M-pyrifera_M_contig82519.19286.1 vs. uniprot
Match: A0A6J4SQN3_9ACTN (Long-chain-fatty-acid--CoA ligase n=1 Tax=uncultured Solirubrobacteraceae bacterium TaxID=1162706 RepID=A0A6J4SQN3_9ACTN)

HSP 1 Score: 280 bits (716), Expect = 1.680e-87
Identity = 151/297 (50.84%), Postives = 198/297 (66.67%), Query Frame = 1
Query:    4 VIPAPLFHAWGLSQLMVAATLAGTAVLPGAFDPAAVMGLVEEHRATVLAAVPVMLHRILDAGTST----DSSSLRITASSGSALPGDLAERWMNATGDHLYSLYGSTEVGQVAVATPVDLRHATGTAGRPLPGIRVKLIDHDQSEVPTGEVGKIMVASSMHFDGYTGGGTKAIVDDHMEIGDQGYFDADGRLFVVGRADDMIISGGENVYPSNIEASLLRHPLVIEAVVLGVPDEDFGQRIRAVIVTSDGQGSGRRTASIKRHLQSELANYEVPRDFVYVEVLPRNAAGKVLRSALV 882
            +I APLFH+WGL+  ++A  L+ T +L   FDP   +  ++EH AT L  VPVML RIL+ G  T    D+ SLR+ A+SGSALPG+LA + M+  GD LY+LYGSTEV    VATP DLR A GTAGRP  G  V+L D D  EV  GE G+I V + + FDGY+GGG KA +D  M  GD G+FD DGRLFV GR D+MI+SGGENV+P  +E ++ R   + E   +GV D DFGQR++A +V  +G     +   +K H++  LA ++VPRD V+++ LPRNA GKVL+  LV
Sbjct:  241 LIAAPLFHSWGLAHFILAIGLSSTLILRRRFDPQDTLSAIDEHGATALIVVPVMLQRILELGPKTLGRYDTGSLRVIAASGSALPGELATKVMDTFGDILYNLYGSTEVAWATVATPEDLRAAPGTAGRPPRGTVVRLYDADDEEVAPGETGRIFVGNELCFDGYSGGGQKARIDGLMSSGDVGHFDEDGRLFVDGRDDEMIVSGGENVFPREVEDTIARLAGIEEVAAVGVEDGDFGQRLKAFVVVREGATVSEQ--DVKAHVKENLARFKVPRDVVFLDALPRNATGKVLKRELV 535          
BLAST of mRNA_M-pyrifera_M_contig82519.19286.1 vs. uniprot
Match: A0A7C7ZJE6_9DELT (Acyl-CoA synthetase n=1 Tax=Myxococcales bacterium TaxID=2026763 RepID=A0A7C7ZJE6_9DELT)

HSP 1 Score: 280 bits (715), Expect = 2.500e-87
Identity = 150/297 (50.51%), Postives = 196/297 (65.99%), Query Frame = 1
Query:    4 VIPAPLFHAWGLSQLMVAATLAGTAVLPGAFDPAAVMGLVEEHRATVLAAVPVMLHRILDAGTST----DSSSLRITASSGSALPGDLAERWMNATGDHLYSLYGSTEVGQVAVATPVDLRHATGTAGRPLPGIRVKLIDHDQSEVPTGEVGKIMVASSMHFDGYTGGGTKAIVDDHMEIGDQGYFDADGRLFVVGRADDMIISGGENVYPSNIEASLLRHPLVIEAVVLGVPDEDFGQRIRAVIVTSDGQGSGRRTASIKRHLQSELANYEVPRDFVYVEVLPRNAAGKVLRSALV 882
            +I AP FH+WG   L++ A L  T +L   FDP A +  ++EHR  VL  VPVM+ RIL+         D+SSL    +SGSALPGDLA RWM+  GD++Y+LYGSTEV   ++A P +LR A GTAGRP  G+ VK++D +  EV  G  G+I V +   FDGYTGGG K I++  M  GD G+FD DGRLF+ GR DDMIISGGENV+P  IE  L  H  V EA VLGV D++FGQR++A +V  +G       A +K H+++ LA Y+VPR+ V++E LPRN  GKVL+  L+
Sbjct:  243 LIAAPTFHSWGGLHLLLGAQLGCTVILQRRFDPEATLAAIQEHRPQVLVVVPVMMQRILELDADVISRYDTSSLEGVCASGSALPGDLALRWMDTFGDNVYNLYGSTEVAHASIAMPDELRAAPGTAGRPPRGVIVKILDDEGREVEKGATGRIFVGNDTQFDGYTGGGNKEIIEGLMSSGDVGHFDDDGRLFIDGRDDDMIISGGENVFPREIEDILSDHTDVAEASVLGVSDDEFGQRLKAFVVLKEGIAPNE--AVLKDHVKTNLARYKVPREIVFLETLPRNPTGKVLKRVLL 537          
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig82519.19286.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A2D6BTH8_9DELT6.740e-9652.36Acyl-CoA synthetase n=1 Tax=Deltaproteobacteria ba... [more]
A0A6G0A844_9ACTN8.590e-9153.04Acyl-CoA synthetase n=2 Tax=Bacteria TaxID=2 RepID... [more]
A0A2W5ZHT3_9ACTN2.530e-9052.54Acyl-CoA synthetase (Fragment) n=1 Tax=Solirubroba... [more]
UPI001CC821B41.550e-8950.85AMP-binding protein n=1 Tax=Nocardioides sp. GBK3Q... [more]
A0A857KHA3_9ACTN1.980e-8952.70AMP-binding protein n=2 Tax=Gordonia amarae TaxID=... [more]
A0A524MXY2_9ACTN3.010e-8853.77Acyl-CoA synthetase n=1 Tax=Acidimicrobiales bacte... [more]
A0A537W537_9ACTN3.620e-8853.04Acyl-CoA synthetase n=1 Tax=Actinomycetia bacteriu... [more]
A0A6C7DZK6_ILUCY1.600e-8751.19Putative fatty-acid--CoA ligase n=1 Tax=Ilumatobac... [more]
A0A6J4SQN3_9ACTN1.680e-8750.84Long-chain-fatty-acid--CoA ligase n=1 Tax=uncultur... [more]
A0A7C7ZJE6_9DELT2.500e-8750.51Acyl-CoA synthetase n=1 Tax=Myxococcales bacterium... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig82519contigM-pyrifera_M_contig82519:2..886 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-19
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Properties
Property NameValue
Taxonomic scopeBacteria
Seed ortholog score295.0
Seed ortholog evalue3.8e-77
Seed eggNOG ortholog1075090.GOAMR_61_00070
KEGG koko:K00666
Hectar predicted targeting categorysignal peptide
EggNOG free text desc.AMP-binding enzyme C-terminal domain
EggNOG OGs2GKDF@201174,4GACE@85026,COG0318@1,COG0318@2,COG3427@1,COG3427@2
COG Functional cat.IQ
Best tax levelGordoniaceae
Best eggNOG OGNA|NA|NA
BRITEko00000,ko01000,ko01004
Exons1
Model size885
Cds size885
Stop1
Start0
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622816731.8061624-CDS-M-pyrifera_M_contig82519:1..8861622816731.8061624-CDS-M-pyrifera_M_contig82519:1..886Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig82519 2..886 +
1692278145.6321392-CDS-M-pyrifera_M_contig82519:1..8861692278145.6321392-CDS-M-pyrifera_M_contig82519:1..886Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig82519 2..886 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig82519.19286.1prot_M-pyrifera_M_contig82519.19286.1Macrocystis pyrifera P11B4 malepolypeptideM-pyrifera_M_contig82519 2..886 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_M-pyrifera_M_contig82519.19286.1

>prot_M-pyrifera_M_contig82519.19286.1 ID=prot_M-pyrifera_M_contig82519.19286.1|Name=mRNA_M-pyrifera_M_contig82519.19286.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=295bp
FVIPAPLFHAWGLSQLMVAATLAGTAVLPGAFDPAAVMGLVEEHRATVLA
AVPVMLHRILDAGTSTDSSSLRITASSGSALPGDLAERWMNATGDHLYSL
YGSTEVGQVAVATPVDLRHATGTAGRPLPGIRVKLIDHDQSEVPTGEVGK
IMVASSMHFDGYTGGGTKAIVDDHMEIGDQGYFDADGRLFVVGRADDMII
SGGENVYPSNIEASLLRHPLVIEAVVLGVPDEDFGQRIRAVIVTSDGQGS
GRRTASIKRHLQSELANYEVPRDFVYVEVLPRNAAGKVLRSALV*
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mRNA from alignment at M-pyrifera_M_contig82519:2..886+

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_M-pyrifera_M_contig82519.19286.1 ID=mRNA_M-pyrifera_M_contig82519.19286.1|Name=mRNA_M-pyrifera_M_contig82519.19286.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=885bp|location=Sequence derived from alignment at M-pyrifera_M_contig82519:2..886+ (Macrocystis pyrifera P11B4 male)
TTCGTGATTCCGGCCCCGCTGTTCCACGCCTGGGGGCTCAGCCAACTCAT GGTCGCCGCCACCCTGGCGGGGACCGCGGTGCTGCCGGGAGCGTTCGACC CGGCGGCCGTGATGGGACTCGTCGAGGAACATCGTGCCACCGTGCTGGCG GCGGTCCCGGTGATGCTGCATCGCATCCTCGATGCCGGCACGAGCACCGA CAGTTCGTCGCTGAGAATCACCGCAAGCAGCGGCTCTGCGCTTCCCGGAG ACCTCGCCGAGCGATGGATGAACGCCACTGGTGACCACCTCTACAGCCTG TACGGGTCCACCGAGGTCGGTCAGGTCGCCGTCGCGACCCCCGTCGATCT TCGACACGCCACCGGCACCGCAGGCCGTCCGCTGCCGGGCATTCGTGTCA AGCTGATCGACCACGACCAGTCAGAGGTCCCGACCGGTGAGGTCGGCAAG ATCATGGTGGCATCGTCGATGCACTTCGACGGGTACACCGGCGGCGGCAC CAAGGCGATCGTGGACGACCACATGGAGATCGGCGATCAGGGCTACTTCG ATGCCGACGGTCGACTGTTCGTCGTCGGCCGGGCCGACGACATGATCATC AGCGGTGGCGAAAACGTCTATCCGTCCAACATCGAGGCCAGTCTGCTCCG ACATCCCCTGGTCATCGAGGCCGTCGTTCTCGGCGTGCCCGACGAAGACT TCGGTCAGCGGATCCGCGCCGTCATCGTCACCAGCGACGGTCAGGGGTCC GGTCGTCGCACCGCCTCGATCAAACGGCATCTCCAGTCCGAGCTGGCCAA CTACGAGGTCCCTCGCGATTTCGTCTACGTCGAGGTGCTGCCGCGCAACG CCGCCGGGAAGGTGCTGCGTTCCGCGCTCGTCTGA
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Coding sequence (CDS) from alignment at M-pyrifera_M_contig82519:2..886+

>mRNA_M-pyrifera_M_contig82519.19286.1 ID=mRNA_M-pyrifera_M_contig82519.19286.1|Name=mRNA_M-pyrifera_M_contig82519.19286.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=1770bp|location=Sequence derived from alignment at M-pyrifera_M_contig82519:2..886+ (Macrocystis pyrifera P11B4 male)
TTCGTGATTCCGGCCCCGCTGTTCCACGCCTGGGGGCTCAGCCAACTCAT
GGTCGCCGCCACCCTGGCGGGGACCGCGGTGCTGCCGGGAGCGTTCGACC
CGGCGGCCGTGATGGGACTCGTCGAGGAACATCGTGCCACCGTGCTGGCG
GCGGTCCCGGTGATGCTGCATCGCATCCTCGATGCCGGCACGAGCACCGA
CAGTTCGTCGCTGAGAATCACCGCAAGCAGCGGCTCTGCGCTTCCCGGAG
ACCTCGCCGAGCGATGGATGAACGCCACTGGTGACCACCTCTACAGCCTG
TACGGGTCCACCGAGGTCGGTCAGGTCGCCGTCGCGACCCCCGTCGATCT
TCGACACGCCACCGGCACCGCAGGCCGTCCGCTGCCGGGCATTCGTGTCA
AGCTGATCGACCACGACCAGTCAGAGGTCCCGACCGGTGAGGTCGGCAAG
ATCATGGTGGCATCGTCGATGCACTTCGACGGGTACACCGGCGGCGGCAC
CAAGGCGATCGTGGACGACCACATGGAGATCGGCGATCAGGGCTACTTCG
ATGCCGACGGTCGACTGTTCGTCGTCGGCCGGGCCGACGACATGATCATC
AGCGGTGGCGAAAACGTCTATCCGTCCAACATCGAGGCCAGTCTGCTCCG
ACATCCCCTGGTCATCGAGGCCGTCGTTCTCGGCGTGCCCGACGAAGACT
TCGGTCAGCGGATCCGCGCCGTCATCGTCACCAGCGACGGTCAGGGGTCC
GGTCGTCGCACCGCCTCGATCAAACGGCATCTCCAGTCCGAGCTGGCCAA
CTACGAGGTCCCTCGCGATTTCGTCTACGTCGAGGTGCTGCCGCGCAACG
CCGCCGGGAAGGTGCTGCGTTCCGCGCTCGTCTGATTCGTGATTCCGGCC
CCGCTGTTCCACGCCTGGGGGCTCAGCCAACTCATGGTCGCCGCCACCCT
GGCGGGGACCGCGGTGCTGCCGGGAGCGTTCGACCCGGCGGCCGTGATGG
GACTCGTCGAGGAACATCGTGCCACCGTGCTGGCGGCGGTCCCGGTGATG
CTGCATCGCATCCTCGATGCCGGCACGAGCACCGACAGTTCGTCGCTGAG
AATCACCGCAAGCAGCGGCTCTGCGCTTCCCGGAGACCTCGCCGAGCGAT
GGATGAACGCCACTGGTGACCACCTCTACAGCCTGTACGGGTCCACCGAG
GTCGGTCAGGTCGCCGTCGCGACCCCCGTCGATCTTCGACACGCCACCGG
CACCGCAGGCCGTCCGCTGCCGGGCATTCGTGTCAAGCTGATCGACCACG
ACCAGTCAGAGGTCCCGACCGGTGAGGTCGGCAAGATCATGGTGGCATCG
TCGATGCACTTCGACGGGTACACCGGCGGCGGCACCAAGGCGATCGTGGA
CGACCACATGGAGATCGGCGATCAGGGCTACTTCGATGCCGACGGTCGAC
TGTTCGTCGTCGGCCGGGCCGACGACATGATCATCAGCGGTGGCGAAAAC
GTCTATCCGTCCAACATCGAGGCCAGTCTGCTCCGACATCCCCTGGTCAT
CGAGGCCGTCGTTCTCGGCGTGCCCGACGAAGACTTCGGTCAGCGGATCC
GCGCCGTCATCGTCACCAGCGACGGTCAGGGGTCCGGTCGTCGCACCGCC
TCGATCAAACGGCATCTCCAGTCCGAGCTGGCCAACTACGAGGTCCCTCG
CGATTTCGTCTACGTCGAGGTGCTGCCGCGCAACGCCGCCGGGAAGGTGC
TGCGTTCCGCGCTCGTCTGA
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