mRNA_M-pyrifera_M_contig82371.19265.1 (mRNA) Macrocystis pyrifera P11B4 male
Overview
Homology
BLAST of mRNA_M-pyrifera_M_contig82371.19265.1 vs. uniprot
Match: A0A5A8D2V7_CAFRO (DUF1619 domain-containing protein n=3 Tax=Cafeteria roenbergensis TaxID=33653 RepID=A0A5A8D2V7_CAFRO) HSP 1 Score: 80.5 bits (197), Expect = 3.500e-15 Identity = 47/105 (44.76%), Postives = 63/105 (60.00%), Query Frame = 1 Query: 55 TYDATRRECQGLIGEAHLQILAARVGEVGNPQRKIVAAKLTFHEVTVQLPAEDIVAPPDAGETVPFELRFVVSFAELDDAELTPFIPPPPSAVKLPFDIWYPFEL 369 T+DA CQG++ +++LAA VGE NPQRKI+AA + +T D+ A AG T F L VSFA L + L FIPPPPS + LP D++YPF++ Sbjct: 570 TWDAASLTCQGMLVGFEVRLLAAPVGEAANPQRKIIAAATRY--IT-----GDLTAASAAGATA-FALTSSVSFASLGASGLDRFIPPPPSVIALPHDLFYPFQI 666
BLAST of mRNA_M-pyrifera_M_contig82371.19265.1 vs. uniprot
Match: A0A7S1EIN9_HEMAN (Hypothetical protein (Fragment) n=1 Tax=Hemiselmis andersenii TaxID=464988 RepID=A0A7S1EIN9_HEMAN) HSP 1 Score: 65.1 bits (157), Expect = 7.840e-10 Identity = 36/101 (35.64%), Postives = 55/101 (54.46%), Query Frame = 1 Query: 70 RRECQGLIGEAHLQILAARVGEVGNPQRKIVAAKLTFHEVTVQLPAEDIVAPPDAGETVPFELRFVVSFAELDDAELTPFIPPPPSAV-KLPFDIWYPFEL 369 R EC ++ H+QIL A G + NPQRKI+ A++ + + IV + + +R VSF ++D + IPPPPS + LP DI+YPF++ Sbjct: 305 RGECIDVVSGTHIQILTADTGNIQNPQRKILGARVVYETSNWRA----IVKTVGSESYGTYSIRSSVSFLNIEDGDTVEVIPPPPSILPSLPDDIFYPFQI 401
BLAST of mRNA_M-pyrifera_M_contig82371.19265.1 vs. uniprot
Match: A0A7S0Z1H8_9CRYP (Hypothetical protein n=1 Tax=Hemiselmis tepida TaxID=464990 RepID=A0A7S0Z1H8_9CRYP) HSP 1 Score: 60.8 bits (146), Expect = 2.530e-8 Identity = 39/101 (38.61%), Postives = 55/101 (54.46%), Query Frame = 1 Query: 70 RRECQGLIGEAHLQILAARVGEVGNPQRKIVAAKLTFHEVTVQLPAEDIVAPPDAGETVPFELRFVVSFAELDDAELTPFIPPPPSAV-KLPFDIWYPFEL 369 R EC ++ H+QIL A G V NPQRKI+ A++ + T A + A +A + +R VSF + D IPPPPS + LP DI+YPF++ Sbjct: 390 RGECLDVVTGTHIQILTADTGNVRNPQRKILGARVVYE--TANWLAR-VKAMGEASHAT-YSIRSSVSFLNILDGGTVEVIPPPPSILPSLPDDIFYPFQI 486
BLAST of mRNA_M-pyrifera_M_contig82371.19265.1 vs. uniprot
Match: A0A8J2X759_9STRA (Hypothetical protein n=1 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A8J2X759_9STRA) HSP 1 Score: 54.3 bits (129), Expect = 5.130e-6 Identity = 36/128 (28.12%), Postives = 61/128 (47.66%), Query Frame = 1 Query: 1 DVEQWLTLTTPGVDGFATTYDATRRE----CQGLIGEAHLQILAARVGEVGNPQRKIVAAKLTFHEVTVQLPAEDIVAPPDAGETVPFELRFVVSFAELDDAELTPFIPP-PPSAVKLPFDIWYPFEL 369 D QWL L P T DA +E C+ I + + + VG GNPQ KI+ A+++F + + P +++ + +F + D++ + PP PP A+ +P D+WYPF++ Sbjct: 587 DNSQWLKLPRP------TRNDADWQERSGSCKNAITSMNYRFIWTYVGAQGNPQAKIIGARISFGTSDINYHHSTV---PSTSQSI--SITATATFVK-KDSDFVDYSPPSPPVAISVPHDVWYPFKI 702 The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig82371.19265.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90) Total hits: 4
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_M-pyrifera_M_contig82371.19265.1 >prot_M-pyrifera_M_contig82371.19265.1 ID=prot_M-pyrifera_M_contig82371.19265.1|Name=mRNA_M-pyrifera_M_contig82371.19265.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=123bp DVEQWLTLTTPGVDGFATTYDATRRECQGLIGEAHLQILAARVGEVGNPQback to top mRNA from alignment at M-pyrifera_M_contig82371:542..910- Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_M-pyrifera_M_contig82371.19265.1 ID=mRNA_M-pyrifera_M_contig82371.19265.1|Name=mRNA_M-pyrifera_M_contig82371.19265.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=369bp|location=Sequence derived from alignment at M-pyrifera_M_contig82371:542..910- (Macrocystis pyrifera P11B4 male)back to top Coding sequence (CDS) from alignment at M-pyrifera_M_contig82371:542..910- >mRNA_M-pyrifera_M_contig82371.19265.1 ID=mRNA_M-pyrifera_M_contig82371.19265.1|Name=mRNA_M-pyrifera_M_contig82371.19265.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=738bp|location=Sequence derived from alignment at M-pyrifera_M_contig82371:542..910- (Macrocystis pyrifera P11B4 male)back to top |