mRNA_M-pyrifera_M_contig82359.19261.1 (mRNA) Macrocystis pyrifera P11B4 male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_M-pyrifera_M_contig82359.19261.1
Unique NamemRNA_M-pyrifera_M_contig82359.19261.1
TypemRNA
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Homology
BLAST of mRNA_M-pyrifera_M_contig82359.19261.1 vs. uniprot
Match: A0A7S0KTL2_MICPS (Intraflagellar transport protein 122 homolog (Fragment) n=1 Tax=Micromonas pusilla TaxID=38833 RepID=A0A7S0KTL2_MICPS)

HSP 1 Score: 285 bits (728), Expect = 1.710e-89
Identity = 136/301 (45.18%), Postives = 200/301 (66.45%), Query Frame = 1
Query:    1 LAWNPSPEEAFDILAVGSWDGTLSFHKLNGRTVGRERQLDAVPTSLAYTRGGEFLLSAGSDRSVRLLTKEGAALGTLVEADEWVWRARPRLAHSATAPGLRVAVADAAGKVGVWAVHFGTVHALYRDRYAFRDLMTDVVVQHLTTEQRVRIRCKQLVHKVALFRGVLAVQLKDSINVYRLTDAAAPTDMQYKPAQRIKGAHECSSLVATQRHLVLCRGRRLVALGAGGKREREWELDAPVRFVKAVGGAAGAEGLLVGLKDGQVLQVFLDNPFPVQLLEGGTGVKCVDLSLDKTRLAVVDE 903
            LAWNP+  E  D++AVG WDGTLSF++LNG  VG + +L   P S++Y  GG++++  G+D++ RL +KEG  L TL E   WVW AR R  H+A      +AV    G +    + F TVH +Y++ YA+RDLMTDV+VQ L T+Q+VRIRCK  V K+A+++  LAVQL D + +Y+  ++  P DMQY+    I+   +C+ LV T  H++LC  ++L+     GK+ER W +D+ +R++K  GG    EG+LVGLKDG  L++F+DN FP++L+  G  V+C+D+S  + +LAVVDE
Sbjct:  120 LAWNPNKRETHDVMAVGCWDGTLSFYQLNGMQVGDDTRLGFDPCSVSYFGGGDYVVVGGTDKTARLCSKEGTVLTTLCERGSWVWCARARPGHNA------IAVGSEDGSISTHTLTFSTVHGMYKELYAYRDLMTDVIVQQLETDQKVRIRCKDYVKKIAVYKDKLAVQLPDKLVIYQKIESDDPDDMQYRMMTTIEDDLKCNLLVITSHHVILCMEKKLLLYTMEGKKERTWSMDSVIRYIKVNGGPEKGEGVLVGLKDGMCLKIFIDNDFPMELVNHGASVRCLDMSAFRKKLAVVDE 414          
BLAST of mRNA_M-pyrifera_M_contig82359.19261.1 vs. uniprot
Match: A0A6A0GPI4_HYAAZ (Intraflagellar transport protein 122 homolog n=1 Tax=Hyalella azteca TaxID=294128 RepID=A0A6A0GPI4_HYAAZ)

HSP 1 Score: 276 bits (707), Expect = 1.490e-88
Identity = 142/303 (46.86%), Postives = 197/303 (65.02%), Query Frame = 1
Query:    1 LAWNPSPEEAFDILAVGSWDGTLSFHKLNGRTVGRERQLDAVPTSLAYTRGGEFLLSAGSDRSVRLLTKEGAALGTLVEADEWVW--RARPRLAHSATAPGLRVAVADAAGKVGVWAVHFGTVHALYRDRYAFRDLMTDVVVQHLTTEQRVRIRCKQLVHKVALFRGVLAVQLKDSINVYRLTDAAAPTDMQYKPAQRIKGAHECSSLVATQRHLVLCRGRRLVALGAGGKREREWELDAPVRFVKAVGGAAGAEGLLVGLKDGQVLQVFLDNPFPVQLLEGGTGVKCVDLSLDKTRLAVVDE 903
            LAWNPS EEA+DIL V  W   LSF+ +NG+ +G+ER L   P  ++Y   GE+LL  G++RS  L T+EG  LG + +   WVW   A P  ++        VAV    G +  + + F TVH LY++RYA+R+ MTDV++QHL TEQ+VRI+C+ LV KVA+++  LAVQL + + VY L    A  DM Y+   +I    EC+ LV    H+VLC+ +RL  L   G REREW+LD+ +R++K VGG    EGLL+GLK+GQVL++FLDN FPV LL   + ++C+DL+  + RLAVVD+
Sbjct:   21 LAWNPSKEEAYDILCVADWGQNLSFYSMNGKLIGKERPLGFDPCCVSYFSKGEYLLVGGANRSCSLYTREGVRLGLICDQQSWVWCCEAHPDSSY--------VAVGCQDGTIAYFQLVFATVHGLYKERYAYRENMTDVIIQHLITEQKVRIKCRDLVKKVAIYKHRLAVQLPERVIVYELYSQEA-ADMHYRVRDKINQKLECNLLVVCTNHIVLCQEKRLQCLNFTGLREREWQLDSMIRYIKVVGGPPNREGLLLGLKNGQVLKIFLDNAFPVHLLTVSSAIRCLDLNSSRHRLAVVDD 314          
BLAST of mRNA_M-pyrifera_M_contig82359.19261.1 vs. uniprot
Match: A0A1S3ICX5_LINUN (Intraflagellar transport protein 122 homolog n=1 Tax=Lingula unguis TaxID=7574 RepID=A0A1S3ICX5_LINUN)

HSP 1 Score: 285 bits (730), Expect = 7.940e-88
Identity = 140/302 (46.36%), Postives = 208/302 (68.87%), Query Frame = 1
Query:    1 LAWNPSPEEAFDILAVGSWDGTLSFHKLNGRTVGRERQLDAVPTSLAYTRGGEFLLSAGSDRSVRLLTKEGAALGTLVEADEWVWRARPRLAHSATAPGLRVAVADAAGKVGVWAVHFGTVHALYRDRYAFRDLMTDVVVQHLTTEQRVRIRCKQLVHKVALFRGVLAVQLKDSINVYRL-TDAAAPTDMQYKPAQRIKGAHECSSLVATQRHLVLCRGRRLVALGAGGKREREWELDAPVRFVKAVGGAAGAEGLLVGLKDGQVLQVFLDNPFPVQLLEGGTGVKCVDLSLDKTRLAVVDE 903
            L WNPS +EAFDIL V  W G LSF++L+G+ +G++R L+  P  +++   GE+++  GS++ V L TKEG  LGT+ E + WVW  R R   +  A G +       G +  + + F TVH LY+DRYA+RD MTDV++QHL T+Q+VRI+C+ LV K+A++R  LAVQL D I VY L +D +A  DM Y+  ++I    +C+ LV   +H++LC+ +RL  L   G +EREW +++ +R++K +GG  G EGLLVGLK+GQ++++F+DNPFP+ LL+  T V+C+D+S  +T+LAVVDE
Sbjct:  188 LEWNPSKDEAFDILTVADWGGQLSFYQLSGKQIGKDRHLEYDPCCVSWFSKGEYVVIGGSNKQVSLHTKEGVKLGTIGEQNSWVWCCRVRPDSNYVAIGCQD------GTIAYYQLIFSTVHGLYKDRYAYRDNMTDVIIQHLITDQKVRIKCRDLVKKIAIYRHRLAVQLPDKIVVYELYSDDSA--DMHYRIKEKINKKFDCNLLVVCSQHIILCQEKRLQCLNFKGIKEREWIMESLIRYIKVIGGPPGREGLLVGLKNGQIMKIFVDNPFPIVLLKQATSVRCLDMSASRTKLAVVDE 481          
BLAST of mRNA_M-pyrifera_M_contig82359.19261.1 vs. uniprot
Match: UPI001F046407 (LOW QUALITY PROTEIN: intraflagellar transport protein 122 homolog n=1 Tax=Xenia sp. Carnegie-2017 TaxID=2897299 RepID=UPI001F046407)

HSP 1 Score: 293 bits (751), Expect = 1.270e-87
Identity = 139/301 (46.18%), Postives = 210/301 (69.77%), Query Frame = 1
Query:    1 LAWNPSPEEAFDILAVGSWDGTLSFHKLNGRTVGRERQLDAVPTSLAYTRGGEFLLSAGSDRSVRLLTKEGAALGTLVEADEWVWRARPRLAHSATAPGLRVAVADAAGKVGVWAVHFGTVHALYRDRYAFRDLMTDVVVQHLTTEQRVRIRCKQLVHKVALFRGVLAVQLKDSINVYRLTDAAAPTDMQYKPAQRIKGAHECSSLVATQRHLVLCRGRRLVALGAGGKREREWELDAPVRFVKAVGGAAGAEGLLVGLKDGQVLQVFLDNPFPVQLLEGGTGVKCVDLSLDKTRLAVVDE 903
            ++WNPS +E +D+LAVG W+  LSF++L+G+ +G++R L   P SL +   GE+L+  GS++   L TKEG  LG + E D W+W  +P    +    G +       G V    + F TVH+LY+DRYA+RD MTDV+VQHLTTE +VRI+C+ LV K+A++RG LA+QL + I VY L+    PTDM+Y+  ++I+  ++CS LV    ++VLC+G++L  L   G++EREW +++ +R+++ +GG  G EGLLVGLK+GQ+L++F+DNPFPV LL+  TG++C+DLS  +T++AVV E
Sbjct:  186 ISWNPSKDEPYDVLAVGDWNQKLSFYQLSGKQIGKDRHLGFDPCSLNFFSHGEYLVIGGSNKECLLYTKEGVKLGAIGEHDSWLWSCKPTPGQNYVVTGCQD------GTVSYHQLVFSTVHSLYQDRYAYRDSMTDVIVQHLTTESKVRIKCRDLVKKIAVYRGRLAMQLPERIIVYELS-GDDPTDMRYRVKEKIEKKYDCSLLVVCANNVVLCQGKKLQCLSFRGEKEREWNMESLIRYIRVIGGPPGREGLLVGLKNGQILKIFMDNPFPVMLLKHETGIRCLDLSCSRTKIAVVGE 479          
BLAST of mRNA_M-pyrifera_M_contig82359.19261.1 vs. uniprot
Match: A0A3M6UCC7_POCDA (Intraflagellar transport protein 122 homolog n=2 Tax=Pocilloporidae TaxID=46729 RepID=A0A3M6UCC7_POCDA)

HSP 1 Score: 292 bits (748), Expect = 3.540e-87
Identity = 149/302 (49.34%), Postives = 207/302 (68.54%), Query Frame = 1
Query:    1 LAWNPSPEEAFDILAVGSWDGTLSFHKLNGRTVGRERQLDAVPTSLAYTRGGEFLLSAGSDRSVRLLTKEGAALGTLVEADEWVWRARPRLAHSATAPGLRVAVADAAGKVGVWAVHFGTVHALYRDRYAFRDLMTDVVVQHLTTEQRVRIRCKQLVHKVALFRGVLAVQLKDSINVYRL-TDAAAPTDMQYKPAQRIKGAHECSSLVATQRHLVLCRGRRLVALGAGGKREREWELDAPVRFVKAVGGAAGAEGLLVGLKDGQVLQVFLDNPFPVQLLEGGTGVKCVDLSLDKTRLAVVDE 903
            L+WNPS EE +DILAVG W   LSF++L+G+ VG++R L   P  L+Y   GE+L+  GSD+   L TKEG AL ++ E   WVW  R R   +  A G +       G +  + + F TVH LY+DRYAFRD MTDV++QHL TEQ+VRI+C+ LV K+A++R  LAVQL D I +Y L TD  +  DM YK  ++I+   EC+ LVA   H++LC+ RRL  L   G +EREW +D+ +R++K +GG +G EGLLVGLK+GQ++++F++NPFP+ LL+  T V+C+DLS  +T+LAVVDE
Sbjct:  186 LSWNPSKEEPYDILAVGDWSQKLSFYQLSGKQVGKDRYLGYDPCCLSYFSKGEYLIIGGSDKKCSLHTKEGVALTSVGEQQSWVWCCRVRPDSNYVALGCQD------GTIAYYQLIFSTVHGLYKDRYAFRDNMTDVIIQHLITEQKVRIKCRDLVKKIAIYRHRLAVQLPDKIVIYELNTDDIS--DMHYKVKEKIERKFECNLLVACSNHIILCQERRLQCLAFTGIKEREWVMDSLIRYIKVIGGPSGREGLLVGLKNGQIMKIFINNPFPLLLLKQETSVRCLDLSSSRTKLAVVDE 479          
BLAST of mRNA_M-pyrifera_M_contig82359.19261.1 vs. uniprot
Match: UPI001068FF11 (intraflagellar transport protein 122 homolog n=1 Tax=Dendronephthya gigantea TaxID=151771 RepID=UPI001068FF11)

HSP 1 Score: 290 bits (743), Expect = 1.740e-86
Identity = 138/301 (45.85%), Postives = 208/301 (69.10%), Query Frame = 1
Query:    1 LAWNPSPEEAFDILAVGSWDGTLSFHKLNGRTVGRERQLDAVPTSLAYTRGGEFLLSAGSDRSVRLLTKEGAALGTLVEADEWVWRARPRLAHSATAPGLRVAVADAAGKVGVWAVHFGTVHALYRDRYAFRDLMTDVVVQHLTTEQRVRIRCKQLVHKVALFRGVLAVQLKDSINVYRLTDAAAPTDMQYKPAQRIKGAHECSSLVATQRHLVLCRGRRLVALGAGGKREREWELDAPVRFVKAVGGAAGAEGLLVGLKDGQVLQVFLDNPFPVQLLEGGTGVKCVDLSLDKTRLAVVDE 903
            ++WNPS +E +D+LAVG W+ TLSF++L+G+ +G++R L   P SLA+   GE+L+  GS++   L TKEG  LG++ E   W+W  R R   +    G +       G +  + + F TVH LY+DRYA+RD MTDV+VQHLTTE +VRI+C+ LV K+A++R  LA+QL D I VY LT +  PTDM+Y+  ++I+   +C+ LV    +++LC+ +RL  L   G++EREW +++ +R++K +GG  G EGLLVGLK+GQ+ ++F +NPFP+ LL+  T V+C+DLS  +T++AVVDE
Sbjct:  186 ISWNPSKDEPYDVLAVGDWNQTLSFYQLSGKQIGKDRHLGFDPCSLAFFSQGEYLVIGGSNKECSLYTKEGVRLGSVGEQQSWLWSCRVRPGQNFVVTGCQD------GTIAYYQLVFSTVHGLYQDRYAYRDNMTDVIVQHLTTENKVRIKCRDLVKKIAIYRSRLAMQLPDRIIVYELT-SDDPTDMRYRVKEKIEEKFDCNLLVVCANNIILCQEKRLQCLSFRGEKEREWNMESLIRYIKVIGGPPGREGLLVGLKNGQIFKIFTNNPFPILLLKQQTSVRCLDLSCSRTKIAVVDE 479          
BLAST of mRNA_M-pyrifera_M_contig82359.19261.1 vs. uniprot
Match: A0A2J8TVI5_PONAB (Intraflagellar transport protein 122 homolog (Fragment) n=2 Tax=Hominidae TaxID=9604 RepID=A0A2J8TVI5_PONAB)

HSP 1 Score: 276 bits (706), Expect = 4.400e-86
Identity = 133/301 (44.19%), Postives = 201/301 (66.78%), Query Frame = 1
Query:    1 LAWNPSPEEAFDILAVGSWDGTLSFHKLNGRTVGRERQLDAVPTSLAYTRGGEFLLSAGSDRSVRLLTKEGAALGTLVEADEWVWRARPRLAHSATAPGLRVAVADAAGKVGVWAVHFGTVHALYRDRYAFRDLMTDVVVQHLTTEQRVRIRCKQLVHKVALFRGVLAVQLKDSINVYRLTDAAAPTDMQYKPAQRIKGAHECSSLVATQRHLVLCRGRRLVALGAGGKREREWELDAPVRFVKAVGGAAGAEGLLVGLKDGQVLQVFLDNPFPVQLLEGGTGVKCVDLSLDKTRLAVVDE 903
            + WNPS EE  DILAV  W   +SF++L+G+ +G++R L+  P  ++Y   GE++L  GSD+ V L TK+G  LGT+ E + WVW  + +   +    G +       G +  + + F TVH LY+DRYA+RD MTDV+VQHL TEQ+VRI+CK+LV K+A++R  LA+QL + I +Y L    + +DM Y+  ++I    EC+ LV    H++LC+ +RL  L   G +EREW++++ +R++K +GG  G EGLLVGLK+GQ+L++F+DN F + LL+  T V+C+D+S  + +LAVVDE
Sbjct:  147 ICWNPSREERNDILAVADWGQKVSFYQLSGKQIGKDRALNFDPCCISYFTKGEYILLGGSDKQVSLFTKDGVRLGTVGEQNSWVWTCQAKPDSNYVVVGCQD------GTISFYQLIFSTVHGLYKDRYAYRDSMTDVIVQHLITEQKVRIKCKELVKKIAIYRNRLAIQLPEKILIYELYSEDS-SDMHYRVKEKIIKKFECNLLVVCANHIILCQEKRLQCLSFSGVKEREWQMESLIRYIKVIGGPPGREGLLVGLKNGQILKIFVDNLFAIVLLKQATAVRCLDMSASRKKLAVVDE 440          
BLAST of mRNA_M-pyrifera_M_contig82359.19261.1 vs. uniprot
Match: UPI0009A3576F (intraflagellar transport protein 122 homolog n=1 Tax=Rhincodon typus TaxID=259920 RepID=UPI0009A3576F)

HSP 1 Score: 279 bits (714), Expect = 1.300e-85
Identity = 134/301 (44.52%), Postives = 201/301 (66.78%), Query Frame = 1
Query:    1 LAWNPSPEEAFDILAVGSWDGTLSFHKLNGRTVGRERQLDAVPTSLAYTRGGEFLLSAGSDRSVRLLTKEGAALGTLVEADEWVWRARPRLAHSATAPGLRVAVADAAGKVGVWAVHFGTVHALYRDRYAFRDLMTDVVVQHLTTEQRVRIRCKQLVHKVALFRGVLAVQLKDSINVYRLTDAAAPTDMQYKPAQRIKGAHECSSLVATQRHLVLCRGRRLVALGAGGKREREWELDAPVRFVKAVGGAAGAEGLLVGLKDGQVLQVFLDNPFPVQLLEGGTGVKCVDLSLDKTRLAVVDE 903
            + WNPS +E  DILAV  W   LSF++L+G+ +G++R L+  P  ++Y   GE+++  GSD+ V L TK+G  LG++ E   WVW  R +   +    G +       G +  + + F TVH LY+DRYA+RD MTDV+VQHL TEQ+VRIRC++LV K+A+++  LA+QL + I +Y L  +   TDM Y+  ++I    EC+ LV   +HL+LC  +RL  L   G +EREW +++ +R++K +GG +G EGLLVGLK+GQ+L++F+DNPF + LL+  T V+C+D+S  + +LAVVDE
Sbjct:  186 ICWNPSKDEHTDILAVADWGQRLSFYQLSGKQIGKDRALNFDPCCVSYFSKGEYIVMGGSDKQVSLYTKDGVRLGSIGEQQSWVWTCRVKPDSNYVVVGCQD------GTIAFYQIIFSTVHGLYKDRYAYRDSMTDVIVQHLITEQKVRIRCRELVKKIAIYKNRLAIQLPEKILIYELF-SEDNTDMHYRVKEKITKKFECNLLVVCSQHLILCLEKRLQCLSFSGVKEREWLMESLIRYIKVIGGPSGREGLLVGLKNGQILKIFVDNPFAIVLLKQATSVRCLDMSTSRNKLAVVDE 479          
BLAST of mRNA_M-pyrifera_M_contig82359.19261.1 vs. uniprot
Match: C1EAL9_MICCC (Intraflagellar transport protein 122 homolog n=1 Tax=Micromonas commoda (strain RCC299 / NOUM17 / CCMP2709) TaxID=296587 RepID=C1EAL9_MICCC)

HSP 1 Score: 287 bits (734), Expect = 1.410e-85
Identity = 138/301 (45.85%), Postives = 201/301 (66.78%), Query Frame = 1
Query:    1 LAWNPSPEEAFDILAVGSWDGTLSFHKLNGRTVGRERQLDAVPTSLAYTRGGEFLLSAGSDRSVRLLTKEGAALGTLVEADEWVWRARPRLAHSATAPGLRVAVADAAGKVGVWAVHFGTVHALYRDRYAFRDLMTDVVVQHLTTEQRVRIRCKQLVHKVALFRGVLAVQLKDSINVYRLTDAAAPTDMQYKPAQRIKGAHECSSLVATQRHLVLCRGRRLVALGAGGKREREWELDAPVRFVKAVGGAAGAEGLLVGLKDGQVLQVFLDNPFPVQLLEGGTGVKCVDLSLDKTRLAVVDE 903
            LAWNP+  E  D++AVG WDGTLSF++LNG  VG + +L   P S++Y  GG++++  G+D++ RL +KEG  L TL E   WVW AR R  H+A      +AV    G +   A+ F TVH +Y++ YA+RDLMTDV+VQ L T+Q+VRIRCK  V K+A+++  LAVQL D + +Y+  ++  P DMQY+    I+   +C+ LV T  H++LC  ++L+     GK+ER W +D+ +R++K  GG    EG+LVGLKDG  L++F+DN FPV+L+  G  V+C+D+S  + +LAVVDE
Sbjct:  184 LAWNPNKRETHDVMAVGCWDGTLSFYQLNGMQVGDDTRLGFDPCSVSYFGGGDYVVVGGTDKTARLCSKEGTVLTTLCERGSWVWCARARPGHNA------IAVGSEDGSISTHALTFSTVHGMYKELYAYRDLMTDVIVQQLETDQKVRIRCKDYVKKIAVYKDKLAVQLPDKLVIYQKIESDDPDDMQYRMMTTIEENLKCNLLVITSHHVILCMEKKLLLYTMEGKKERTWSMDSVIRYIKVNGGPEKGEGVLVGLKDGMCLKIFIDNDFPVELVNHGASVRCLDMSAFRKKLAVVDE 478          
BLAST of mRNA_M-pyrifera_M_contig82359.19261.1 vs. uniprot
Match: A0A7S0T117_9CHLO (Intraflagellar transport protein 122 homolog (Fragment) n=1 Tax=Mantoniella antarctica TaxID=81844 RepID=A0A7S0T117_9CHLO)

HSP 1 Score: 285 bits (730), Expect = 4.300e-85
Identity = 138/301 (45.85%), Postives = 201/301 (66.78%), Query Frame = 1
Query:    1 LAWNPSPEEAFDILAVGSWDGTLSFHKLNGRTVGRERQLDAVPTSLAYTRGGEFLLSAGSDRSVRLLTKEGAALGTLVEADEWVWRARPRLAHSATAPGLRVAVADAAGKVGVWAVHFGTVHALYRDRYAFRDLMTDVVVQHLTTEQRVRIRCKQLVHKVALFRGVLAVQLKDSINVYRLTDAAAPTDMQYKPAQRIKGAHECSSLVATQRHLVLCRGRRLVALGAGGKREREWELDAPVRFVKAVGGAAGAEGLLVGLKDGQVLQVFLDNPFPVQLLEGGTGVKCVDLSLDKTRLAVVDE 903
            LAWNP+ +E  D++A+G WDGTLSF++LNG  VG+++ L   P S++Y   GE++  AG+DR V L TKEG  L  + E + WVW ARPR   +  A G         G + ++ + F TVH LY+DRYA+RD MTDV++QHL TEQ+VRI+C+  V K+A+++  LAVQL D + +Y L    +  DM Y+ A +I+   +C+ LV T  H++LC  ++L   G  G  EREW L+A +R++K VGG    EGLLVGLK+G + ++F+DN FP+QL++  + ++C+DLS  + +LAVVDE
Sbjct:  184 LAWNPNKDETHDVMAIGCWDGTLSFYQLNGTQVGKDKALGYDPCSVSYFSNGEYMCVAGTDRRVTLATKEGTTLTQICERNSWVWCARPRPKQNYVAVGCED------GSISMYQLIFSTVHGLYQDRYAYRDYMTDVIIQHLITEQKVRIKCRDYVKKIAVYKDRLAVQLPDRVIIYELLHDDS-YDMHYRVATKIQKKLDCNLLVVTSHHVILCLEKKLQLYGFNGVMEREWVLEAVIRYIKIVGGPENREGLLVGLKNGMIQKIFIDNAFPIQLIKHTSSIRCLDLSFRRQKLAVVDE 477          
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig82359.19261.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A7S0KTL2_MICPS1.710e-8945.18Intraflagellar transport protein 122 homolog (Frag... [more]
A0A6A0GPI4_HYAAZ1.490e-8846.86Intraflagellar transport protein 122 homolog n=1 T... [more]
A0A1S3ICX5_LINUN7.940e-8846.36Intraflagellar transport protein 122 homolog n=1 T... [more]
UPI001F0464071.270e-8746.18LOW QUALITY PROTEIN: intraflagellar transport prot... [more]
A0A3M6UCC7_POCDA3.540e-8749.34Intraflagellar transport protein 122 homolog n=2 T... [more]
UPI001068FF111.740e-8645.85intraflagellar transport protein 122 homolog n=1 T... [more]
A0A2J8TVI5_PONAB4.400e-8644.19Intraflagellar transport protein 122 homolog (Frag... [more]
UPI0009A3576F1.300e-8544.52intraflagellar transport protein 122 homolog n=1 T... [more]
C1EAL9_MICCC1.410e-8545.85Intraflagellar transport protein 122 homolog n=1 T... [more]
A0A7S0T117_9CHLO4.300e-8545.85Intraflagellar transport protein 122 homolog (Frag... [more]

Pages

back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig82359contigM-pyrifera_M_contig82359:6..908 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-19
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Properties
Property NameValue
Taxonomic scopeViridiplantae
Seed ortholog score288.9
Seed ortholog evalue2.8e-75
Seed eggNOG ortholog296587.XP_002503969.1
Preferred nameIFT122
KEGG koko:K19656
Hectar predicted targeting categoryother localisation
EggNOG free text desc.Intraflagellar Transport or IFT refers to the cellular process essential for the formation and maintenance of eukaryotic cilia and flagella
EggNOG OGs37TA0@33090,COG2319@1,KOG1538@2759
COG Functional cat.L
Best tax levelViridiplantae
Best eggNOG OGNA|NA|NA
BRITEko00000,ko03036
Exons1
Model size903
Cds size903
Stop0
Start0
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622816730.550198-CDS-M-pyrifera_M_contig82359:5..9081622816730.550198-CDS-M-pyrifera_M_contig82359:5..908Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig82359 6..908 +
1692278144.983831-CDS-M-pyrifera_M_contig82359:5..9081692278144.983831-CDS-M-pyrifera_M_contig82359:5..908Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig82359 6..908 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig82359.19261.1prot_M-pyrifera_M_contig82359.19261.1Macrocystis pyrifera P11B4 malepolypeptideM-pyrifera_M_contig82359 6..908 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_M-pyrifera_M_contig82359.19261.1

>prot_M-pyrifera_M_contig82359.19261.1 ID=prot_M-pyrifera_M_contig82359.19261.1|Name=mRNA_M-pyrifera_M_contig82359.19261.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=301bp
LAWNPSPEEAFDILAVGSWDGTLSFHKLNGRTVGRERQLDAVPTSLAYTR
GGEFLLSAGSDRSVRLLTKEGAALGTLVEADEWVWRARPRLAHSATAPGL
RVAVADAAGKVGVWAVHFGTVHALYRDRYAFRDLMTDVVVQHLTTEQRVR
IRCKQLVHKVALFRGVLAVQLKDSINVYRLTDAAAPTDMQYKPAQRIKGA
HECSSLVATQRHLVLCRGRRLVALGAGGKREREWELDAPVRFVKAVGGAA
GAEGLLVGLKDGQVLQVFLDNPFPVQLLEGGTGVKCVDLSLDKTRLAVVD
E
back to top

mRNA from alignment at M-pyrifera_M_contig82359:6..908+

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_M-pyrifera_M_contig82359.19261.1 ID=mRNA_M-pyrifera_M_contig82359.19261.1|Name=mRNA_M-pyrifera_M_contig82359.19261.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=903bp|location=Sequence derived from alignment at M-pyrifera_M_contig82359:6..908+ (Macrocystis pyrifera P11B4 male)
TTGGCCTGGAACCCTTCTCCAGAAGAGGCCTTTGACATCCTTGCAGTGGG CAGCTGGGACGGCACGCTGAGCTTCCACAAGCTGAACGGGCGCACCGTGG GGCGGGAGCGACAGCTGGACGCCGTTCCCACATCACTGGCCTACACGCGT GGCGGGGAGTTTCTGCTGAGTGCCGGCTCGGATCGAAGCGTTCGACTGCT GACCAAGGAGGGCGCTGCACTGGGCACCTTGGTGGAGGCTGACGAGTGGG TGTGGAGGGCGAGGCCTCGTCTGGCCCACTCGGCCACCGCCCCGGGTCTT CGAGTCGCAGTGGCTGATGCGGCAGGCAAGGTGGGGGTGTGGGCCGTACA CTTTGGCACCGTGCATGCGCTGTACCGCGACAGGTATGCGTTCCGCGATC TGATGACCGACGTGGTCGTGCAGCACCTGACCACGGAGCAGAGAGTGCGC ATTCGCTGCAAGCAGCTGGTGCACAAGGTGGCACTGTTTCGGGGCGTGCT GGCAGTGCAACTCAAGGACTCGATCAACGTCTACCGACTGACAGACGCCG CTGCACCCACGGACATGCAGTACAAGCCTGCGCAACGCATCAAGGGCGCG CACGAATGCTCCTCGCTGGTGGCCACACAGCGCCACTTGGTGCTCTGTCG CGGCAGGCGCCTGGTGGCCCTGGGAGCCGGGGGCAAGAGGGAGCGAGAGT GGGAGCTGGATGCTCCCGTGCGATTCGTCAAGGCCGTGGGAGGAGCTGCA GGTGCAGAGGGCCTGCTGGTGGGGTTGAAGGATGGGCAGGTGCTGCAGGT GTTTTTGGACAACCCGTTTCCAGTGCAGCTGCTCGAAGGAGGCACTGGGG TGAAGTGCGTGGACTTGAGCCTCGACAAGACGCGGCTGGCCGTGGTGGAT GAG
back to top

Coding sequence (CDS) from alignment at M-pyrifera_M_contig82359:6..908+

>mRNA_M-pyrifera_M_contig82359.19261.1 ID=mRNA_M-pyrifera_M_contig82359.19261.1|Name=mRNA_M-pyrifera_M_contig82359.19261.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=1806bp|location=Sequence derived from alignment at M-pyrifera_M_contig82359:6..908+ (Macrocystis pyrifera P11B4 male)
TTGGCCTGGAACCCTTCTCCAGAAGAGGCCTTTGACATCCTTGCAGTGGG
CAGCTGGGACGGCACGCTGAGCTTCCACAAGCTGAACGGGCGCACCGTGG
GGCGGGAGCGACAGCTGGACGCCGTTCCCACATCACTGGCCTACACGCGT
GGCGGGGAGTTTCTGCTGAGTGCCGGCTCGGATCGAAGCGTTCGACTGCT
GACCAAGGAGGGCGCTGCACTGGGCACCTTGGTGGAGGCTGACGAGTGGG
TGTGGAGGGCGAGGCCTCGTCTGGCCCACTCGGCCACCGCCCCGGGTCTT
CGAGTCGCAGTGGCTGATGCGGCAGGCAAGGTGGGGGTGTGGGCCGTACA
CTTTGGCACCGTGCATGCGCTGTACCGCGACAGGTATGCGTTCCGCGATC
TGATGACCGACGTGGTCGTGCAGCACCTGACCACGGAGCAGAGAGTGCGC
ATTCGCTGCAAGCAGCTGGTGCACAAGGTGGCACTGTTTCGGGGCGTGCT
GGCAGTGCAACTCAAGGACTCGATCAACGTCTACCGACTGACAGACGCCG
CTGCACCCACGGACATGCAGTACAAGCCTGCGCAACGCATCAAGGGCGCG
CACGAATGCTCCTCGCTGGTGGCCACACAGCGCCACTTGGTGCTCTGTCG
CGGCAGGCGCCTGGTGGCCCTGGGAGCCGGGGGCAAGAGGGAGCGAGAGT
GGGAGCTGGATGCTCCCGTGCGATTCGTCAAGGCCGTGGGAGGAGCTGCA
GGTGCAGAGGGCCTGCTGGTGGGGTTGAAGGATGGGCAGGTGCTGCAGGT
GTTTTTGGACAACCCGTTTCCAGTGCAGCTGCTCGAAGGAGGCACTGGGG
TGAAGTGCGTGGACTTGAGCCTCGACAAGACGCGGCTGGCCGTGGTGGAT
GAGTTGGCCTGGAACCCTTCTCCAGAAGAGGCCTTTGACATCCTTGCAGT
GGGCAGCTGGGACGGCACGCTGAGCTTCCACAAGCTGAACGGGCGCACCG
TGGGGCGGGAGCGACAGCTGGACGCCGTTCCCACATCACTGGCCTACACG
CGTGGCGGGGAGTTTCTGCTGAGTGCCGGCTCGGATCGAAGCGTTCGACT
GCTGACCAAGGAGGGCGCTGCACTGGGCACCTTGGTGGAGGCTGACGAGT
GGGTGTGGAGGGCGAGGCCTCGTCTGGCCCACTCGGCCACCGCCCCGGGT
CTTCGAGTCGCAGTGGCTGATGCGGCAGGCAAGGTGGGGGTGTGGGCCGT
ACACTTTGGCACCGTGCATGCGCTGTACCGCGACAGGTATGCGTTCCGCG
ATCTGATGACCGACGTGGTCGTGCAGCACCTGACCACGGAGCAGAGAGTG
CGCATTCGCTGCAAGCAGCTGGTGCACAAGGTGGCACTGTTTCGGGGCGT
GCTGGCAGTGCAACTCAAGGACTCGATCAACGTCTACCGACTGACAGACG
CCGCTGCACCCACGGACATGCAGTACAAGCCTGCGCAACGCATCAAGGGC
GCGCACGAATGCTCCTCGCTGGTGGCCACACAGCGCCACTTGGTGCTCTG
TCGCGGCAGGCGCCTGGTGGCCCTGGGAGCCGGGGGCAAGAGGGAGCGAG
AGTGGGAGCTGGATGCTCCCGTGCGATTCGTCAAGGCCGTGGGAGGAGCT
GCAGGTGCAGAGGGCCTGCTGGTGGGGTTGAAGGATGGGCAGGTGCTGCA
GGTGTTTTTGGACAACCCGTTTCCAGTGCAGCTGCTCGAAGGAGGCACTG
GGGTGAAGTGCGTGGACTTGAGCCTCGACAAGACGCGGCTGGCCGTGGTG
GATGAG
back to top