mRNA_M-pyrifera_M_contig82316.19254.1 (mRNA) Macrocystis pyrifera P11B4 male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_M-pyrifera_M_contig82316.19254.1
Unique NamemRNA_M-pyrifera_M_contig82316.19254.1
TypemRNA
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Homology
BLAST of mRNA_M-pyrifera_M_contig82316.19254.1 vs. uniprot
Match: A0A225WR63_9STRA (Purple acid phosphatase n=2 Tax=Phytophthora TaxID=4783 RepID=A0A225WR63_9STRA)

HSP 1 Score: 186 bits (473), Expect = 1.810e-52
Identity = 106/228 (46.49%), Postives = 133/228 (58.33%), Query Frame = 1
Query:    1 YNARFRMPSAESGGVENMWWSMAYGAASFIFIDSETDFPGAPGDSY-NLRPNGNFGDQLKWFEMALQRANSTRATRPWIIVSGHRPVYSLDACNDAGVPVGA--AADFQKAFEHLLLQYKVDLYLAGHVHGSELSYPTRNNVPIQ-------KHWNGAAAPTYAIIGGAGNIEGLTNYTHDPQNVPWNAYVNGNDEILCKLTVSPQNLTLQYFISQTAALDHQVVITK 654
            +NARFRMPS ESGGV NMW+S  Y +  F  I SETDFP AP ++Y   R  GNFG+QL W E  L+ A++ RAT PWI+V  HRP+Y+L +C+  GVP     +   QKAFE L L+YKVDL   GHVH  E  YPT N+  I        K +    AP + I G AGN EGL N+ + P +  W A ++     + KLT SP NLT+    S T  +  Q  I K
Sbjct:  323 FNARFRMPSPESGGVLNMWYSFDYASVHFTTISSETDFPNAPSNAYYTKRTYGNFGNQLAWLEADLKAAHANRATVPWIVVGMHRPLYTLRSCDANGVPNDKYESLKVQKAFEKLFLKYKVDLVYQGHVHAYERHYPTANSKAIMHGVSKDGKTYTNPKAPVHLIAGIAGNSEGLYNFKNPP-SPKWLALLDNEHYGITKLTASPTNLTITMIESATGTVFDQFSIIK 549          
BLAST of mRNA_M-pyrifera_M_contig82316.19254.1 vs. uniprot
Match: A0A6A4B7Y5_9STRA (Uncharacterized protein n=2 Tax=Phytophthora rubi TaxID=129364 RepID=A0A6A4B7Y5_9STRA)

HSP 1 Score: 179 bits (454), Expect = 8.740e-52
Identity = 100/228 (43.86%), Postives = 129/228 (56.58%), Query Frame = 1
Query:    1 YNARFRMPSAESGGVENMWWSMAYGAASFIFIDSETDFPGAPGDSY-NLRPNGNFGDQLKWFEMALQRANSTRATRPWIIVSGHRPVYSLDACNDAGVPVG--AAADFQKAFEHLLLQYKVDLYLAGHVHGSELSYPTRNNVPIQ-------KHWNGAAAPTYAIIGGAGNIEGLTNYTHDPQNVPWNAYVNGNDEILCKLTVSPQNLTLQYFISQTAALDHQVVITK 654
            +N+RFRMPS ESGGV NMW+S  YG   F  + +ETD+P AP ++Y   R  G FGDQL W E  L+ A++ R   PWIIV  HRP+Y++ +C   GVP     A + Q+AFE L ++YKVDL L GHVH  E  YPT NN  I        K +    AP Y I G AG  EGL  Y  DP +  W   ++     + +L+V+P NLTL    S T  +  +  I K
Sbjct:  100 FNSRFRMPSVESGGVLNMWYSYEYGTVHFTTLSTETDYPNAPSNAYFTKRVYGGFGDQLAWLEEDLKAADANRDNVPWIIVGMHRPMYTIRSCGPDGVPNNDYEARNVQEAFEELFIKYKVDLVLQGHVHTYERLYPTANNSAIMDGVSRDNKTYENPQAPVYVITGTAGGPEGLFVY-QDPPSPEWLVLMDNKHFSITRLSVTPTNLTLAKIESATGIIHDEFSIIK 326          
BLAST of mRNA_M-pyrifera_M_contig82316.19254.1 vs. uniprot
Match: G4ZZW8_PHYSP (Purple acid phosphatase n=1 Tax=Phytophthora sojae (strain P6497) TaxID=1094619 RepID=G4ZZW8_PHYSP)

HSP 1 Score: 184 bits (467), Expect = 9.640e-52
Identity = 103/228 (45.18%), Postives = 132/228 (57.89%), Query Frame = 1
Query:    1 YNARFRMPSAESGGVENMWWSMAYGAASFIFIDSETDFPGAPGDSY-NLRPNGNFGDQLKWFEMALQRANSTRATRPWIIVSGHRPVYSLDACNDAGVPVG--AAADFQKAFEHLLLQYKVDLYLAGHVHGSELSYPTRNNVPIQ-------KHWNGAAAPTYAIIGGAGNIEGLTNYTHDPQNVPWNAYVNGNDEILCKLTVSPQNLTLQYFISQTAALDHQVVITK 654
            +N+RFRMPSAESGGV NMW+S  YG   F  + SETD+P AP ++Y   R  GNFGDQL W E  L+ A+S R   PWIIV  HRP+Y++ +C+  G P     A + Q+AFE L ++YKVDL L GHVH  E  YPT N+  +        K +    AP Y I G AG  EGL  YT  P +  W A V+     + +L+V+P NLTL    S T  +  +  I K
Sbjct:  306 FNSRFRMPSAESGGVLNMWYSYEYGTVHFTSLSSETDYPNAPSNAYFTKRVYGNFGDQLAWLEEDLKAADSNRDQVPWIIVGMHRPMYTIRSCDADGTPNNDYEARNVQEAFEELFIKYKVDLVLQGHVHTYERLYPTANSSAVMDGVSKDNKAYENPQAPVYVIQGTAGGPEGLFQYT-SPPSPAWLALVDNKHFSITRLSVTPTNLTLSKIESATGIIHDEFSIIK 532          
BLAST of mRNA_M-pyrifera_M_contig82316.19254.1 vs. uniprot
Match: M4BQC8_HYAAE (Purple acid phosphatase n=1 Tax=Hyaloperonospora arabidopsidis (strain Emoy2) TaxID=559515 RepID=M4BQC8_HYAAE)

HSP 1 Score: 181 bits (458), Expect = 2.540e-51
Identity = 100/228 (43.86%), Postives = 133/228 (58.33%), Query Frame = 1
Query:    1 YNARFRMPSAESGGVENMWWSMAYGAASFIFIDSETDFPGAPGDSY-NLRPNGNFGDQLKWFEMALQRANSTRATRPWIIVSGHRPVYSLDACNDAGVPVGA--AADFQKAFEHLLLQYKVDLYLAGHVHGSELSYPTRNNVPIQ-------KHWNGAAAPTYAIIGGAGNIEGLTNYTHDPQNVPWNAYVNGNDEILCKLTVSPQNLTLQYFISQTAALDHQVVITK 654
            +NARFRMPS ESGGV NMW+S  Y +  F  + SETDFP AP ++Y   R  GNFG+QL W E  L+ A++ R   PWI+V  HRP+Y+L +C+  GVP     A   QKAFE LL++Y+VDL   GHVH  E  YPT N+ P+        K +    AP Y I G AGN EGLT Y   P +  W A+++     +  +TV+P  LT+ +  + T  +  +  I K
Sbjct:  200 FNARFRMPSLESGGVLNMWYSFDYASVHFTTLSSETDFPDAPTNAYYTQRTYGNFGNQLGWLEADLKAAHANRDKVPWIVVGMHRPLYTLRSCDANGVPNNKFEALKVQKAFEQLLIKYEVDLVYHGHVHSYERLYPTANSKPVMEGVSEEGKLYTNPRAPVYVIAGSAGNAEGLTQYEQLP-SPKWIAHLDATHYGITTITVTPSTLTVTFVEAATEKVLDEFNIVK 426          
BLAST of mRNA_M-pyrifera_M_contig82316.19254.1 vs. uniprot
Match: A0A8K1CPI6_PYTOL (Uncharacterized protein n=2 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1CPI6_PYTOL)

HSP 1 Score: 182 bits (462), Expect = 3.700e-51
Identity = 93/225 (41.33%), Postives = 131/225 (58.22%), Query Frame = 1
Query:    1 YNARFRMPSAESGGVENMWWSMAYGAASFIFIDSETDFPGAPGDSYNLRPNGNFGDQLKWFEMALQRANSTRATRPWIIVSGHRPVYSLDACNDAGVPVGAAADFQKAFEHLLLQYKVDLYLAGHVHGSELSYPTRNNVPIQ-------KHWNGAAAPTYAIIGGAGNIEGLTNYTHDPQNVPWNAYVNGNDEILCKLTVSPQNLTLQYFISQTAALDHQVVITK 654
            +N RF+MPS ESGG +NMW+S  +G   F  I++ETD+P AP +SY  R  G FGDQL W E  L++A++ RA  PW+IV  HR +Y+L  C+  G P G A   QKAFE L ++YKVD  ++GHVH     YP   N P+        K +    AP Y I G AG  EG  +Y  + +   WNA +N  +  + K+ VS ++L+ Q+  +++  +    VITK
Sbjct:  300 FNTRFKMPSKESGGSQNMWYSFEHGPIHFTTINTETDYPDAPNNSYTFREYGGFGDQLTWLENDLKKADANRANTPWLIVMMHRAIYTLTMCDKNGAPKGEALPVQKAFEDLFIKYKVDQVISGHVHLYSRHYPIAKNQPVMDGVSQDGKTYTNPKAPVYLISGAAGCSEGHKDYDENLKT-SWNAVMNNKEYGITKVRVSRKSLSWQFISAESGKVLDDFVITK 523          
BLAST of mRNA_M-pyrifera_M_contig82316.19254.1 vs. uniprot
Match: D0NUG5_PHYIT (Purple acid phosphatase n=15 Tax=Phytophthora TaxID=4783 RepID=D0NUG5_PHYIT)

HSP 1 Score: 181 bits (459), Expect = 1.520e-50
Identity = 103/228 (45.18%), Postives = 132/228 (57.89%), Query Frame = 1
Query:    1 YNARFRMPSAESGGVENMWWSMAYGAASFIFIDSETDFPGAPGDSY-NLRPNGNFGDQLKWFEMALQRANSTRATRPWIIVSGHRPVYSLDACNDAGVPVGA--AADFQKAFEHLLLQYKVDLYLAGHVHGSELSYPTRNNVPIQ-------KHWNGAAAPTYAIIGGAGNIEGLTNYTHDPQNVPWNAYVNGNDEILCKLTVSPQNLTLQYFISQTAALDHQVVITK 654
            YNARFRMPS ESGGV NMW+S  Y +  F  I SETDFP AP ++Y   R  GNFG+QLKW E  L+ A++ RA  PWIIV  HRP+Y+L +C+  GVP     +   QKAFE L ++YKVDL   GHVH  E  YPT ++  I        K +    AP + I G AGN EGL  + + P +  W A ++     + KLT SP NLT+    + T  +  +  I K
Sbjct:  315 YNARFRMPSPESGGVLNMWYSFDYASVHFTTISSETDFPNAPKNAYFTKRTYGNFGNQLKWLEADLKAAHANRANVPWIIVGMHRPLYTLRSCDANGVPNDEYESLKVQKAFEKLFIKYKVDLVYQGHVHAYERHYPTADSKAIMHGVSKDGKTYTNPKAPVHVIAGIAGNSEGLYPFKNPP-SPKWLALMDNEHYGITKLTASPTNLTITMIEAATGTVHDEFSIIK 541          
BLAST of mRNA_M-pyrifera_M_contig82316.19254.1 vs. uniprot
Match: A0A3R7K290_9STRA (Purple acid phosphatase n=6 Tax=Phytophthora kernoviae TaxID=325452 RepID=A0A3R7K290_9STRA)

HSP 1 Score: 179 bits (453), Expect = 6.760e-50
Identity = 99/228 (43.42%), Postives = 129/228 (56.58%), Query Frame = 1
Query:    1 YNARFRMPSAESGGVENMWWSMAYGAASFIFIDSETDFPGAPGDSY-NLRPNGNFGDQLKWFEMALQRANSTRATRPWIIVSGHRPVYSLDACNDAGVPVG--AAADFQKAFEHLLLQYKVDLYLAGHVHGSELSYPTRNNVPIQ-------KHWNGAAAPTYAIIGGAGNIEGLTNYTHDPQNVPWNAYVNGNDEILCKLTVSPQNLTLQYFISQTAALDHQVVITK 654
            +NARFRMPSAESGGV NMW+S  Y +  F  I SETD+P AP ++Y   R  GNFGDQL W E  L+ A++ R   PW+IV  HRP+Y+L +C+  GVP     + + QKAFE L ++YKVDL   GHVH  E  YPT NN  +        K +    AP + I G AGN EGL  +  DP +  W   ++     +  LTV P  LT+    + T  +  +  I K
Sbjct:  290 FNARFRMPSAESGGVLNMWYSFEYASVHFTTISSETDYPDAPSNAYLTNRTYGNFGDQLTWLEADLKAADANRENVPWVIVGMHRPIYTLRSCDANGVPNNDYESLNVQKAFEKLFIKYKVDLVYQGHVHSYERHYPTANNTAVMDGVSKDGKTYTNPQAPVHVIAGMAGNPEGLYQFK-DPPSPEWLVLMDNTKYGITTLTVEPTKLTVTAIEAATEKVYDEFSIVK 516          
BLAST of mRNA_M-pyrifera_M_contig82316.19254.1 vs. uniprot
Match: A0A6G0QDG4_9STRA (Purple acid phosphatase n=10 Tax=Phytophthora TaxID=4783 RepID=A0A6G0QDG4_9STRA)

HSP 1 Score: 179 bits (454), Expect = 7.340e-50
Identity = 100/228 (43.86%), Postives = 129/228 (56.58%), Query Frame = 1
Query:    1 YNARFRMPSAESGGVENMWWSMAYGAASFIFIDSETDFPGAPGDSY-NLRPNGNFGDQLKWFEMALQRANSTRATRPWIIVSGHRPVYSLDACNDAGVPVG--AAADFQKAFEHLLLQYKVDLYLAGHVHGSELSYPTRNNVPIQ-------KHWNGAAAPTYAIIGGAGNIEGLTNYTHDPQNVPWNAYVNGNDEILCKLTVSPQNLTLQYFISQTAALDHQVVITK 654
            +N+RFRMPS ESGGV NMW+S  YG   F  + +ETD+P AP ++Y   R  G FGDQL W E  L+ A++ R   PWIIV  HRP+Y++ +C   GVP     A + Q+AFE L ++YKVDL L GHVH  E  YPT NN  I        K +    AP Y I G AG  EGL  Y  DP +  W   ++     + +L+V+P NLTL    S T  +  +  I K
Sbjct:  306 FNSRFRMPSVESGGVLNMWYSYEYGTVHFTTLSTETDYPNAPSNAYFTKRVYGGFGDQLAWLEEDLKAADANRDNVPWIIVGMHRPMYTIRSCGPDGVPNNDYEARNVQEAFEELFIKYKVDLVLQGHVHTYERLYPTANNSAIMDGVSRDNKTYENPQAPVYVITGTAGGPEGLFVY-QDPPSPEWLVLMDNKHFSITRLSVTPTNLTLAKIESATGIIHDEFSIIK 532          
BLAST of mRNA_M-pyrifera_M_contig82316.19254.1 vs. uniprot
Match: G4ZZW7_PHYSP (Purple acid phosphatase n=7 Tax=Phytophthora TaxID=4783 RepID=G4ZZW7_PHYSP)

HSP 1 Score: 178 bits (451), Expect = 2.830e-49
Identity = 99/228 (43.42%), Postives = 131/228 (57.46%), Query Frame = 1
Query:    1 YNARFRMPSAESGGVENMWWSMAYGAASFIFIDSETDFPGAPGDSY-NLRPNGNFGDQLKWFEMALQRANSTRATRPWIIVSGHRPVYSLDACNDAGVPVGA--AADFQKAFEHLLLQYKVDLYLAGHVHGSELSYPTRNNVPIQ-------KHWNGAAAPTYAIIGGAGNIEGLTNYTHDPQNVPWNAYVNGNDEILCKLTVSPQNLTLQYFISQTAALDHQVVITK 654
            +NARFRMPS ESGG  NMW+S  YG+  F  I SETDFP AP ++Y   R  GNFG+QL W E  L+ A++ RA  PWI+V  HRP+Y+L +C+  GVP     +   QKAFE L ++YKVDL   GHVH  E  YPT N+  I        K +    AP + I G AGN EGL  + + P +  W A ++     +  L+V+P NLT+    + T  +  +  I K
Sbjct:  317 FNARFRMPSPESGGTLNMWYSYEYGSVHFTTISSETDFPNAPSNAYYTKRTYGNFGNQLAWLEADLKAAHANRANVPWIVVGMHRPLYTLRSCDANGVPNDEYESLKVQKAFEKLFIKYKVDLVYQGHVHAYERHYPTANSKAIMHGVSKDGKTYTNPKAPVHVIAGIAGNSEGLYQFKNPP-SPKWLAIMDNKHYGITTLSVTPTNLTITMIEASTGTVHDEFSIIK 543          
BLAST of mRNA_M-pyrifera_M_contig82316.19254.1 vs. uniprot
Match: A0A225WSV4_9STRA (Purple acid phosphatase n=1 Tax=Phytophthora megakarya TaxID=4795 RepID=A0A225WSV4_9STRA)

HSP 1 Score: 177 bits (450), Expect = 2.850e-49
Identity = 98/228 (42.98%), Postives = 128/228 (56.14%), Query Frame = 1
Query:    1 YNARFRMPSAESGGVENMWWSMAYGAASFIFIDSETDFPGAPGDSYNL-RPNGNFGDQLKWFEMALQRANSTRATRPWIIVSGHRPVYSLDACNDAGVPVG--AAADFQKAFEHLLLQYKVDLYLAGHVHGSELSYPTRNNVPIQ-------KHWNGAAAPTYAIIGGAGNIEGLTNYTHDPQNVPWNAYVNGNDEILCKLTVSPQNLTLQYFISQTAALDHQVVITK 654
            +N+RFRMPS ESGGV NMW+S  Y    F  + SETD+P  P ++Y+  R  G FGDQL W E  L+ AN+ R   PW+IV  HRP+Y++ +C+  GVP     A + Q+AFE L ++YKVDL L GHVH  E  YPT NN  I        K +    AP Y I G AG  EGL  Y + P +  W   ++       +L+V+P NLTL    S T  +  +  I K
Sbjct:  306 FNSRFRMPSPESGGVLNMWYSFEYATVHFTSLSSETDYPNFPSNAYHTNRVYGGFGDQLAWLEADLEAANANRDQVPWLIVGMHRPMYTIRSCDANGVPNNDYEARNVQEAFEELFIKYKVDLVLQGHVHAYERHYPTANNSAIMDGVSNDTKTYENPQAPVYVIAGSAGGPEGLFPYKNPP-SPEWLVVMDNTHYSTTRLSVTPTNLTLTMIESATGTVHDEFSIIK 532          
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig82316.19254.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A225WR63_9STRA1.810e-5246.49Purple acid phosphatase n=2 Tax=Phytophthora TaxID... [more]
A0A6A4B7Y5_9STRA8.740e-5243.86Uncharacterized protein n=2 Tax=Phytophthora rubi ... [more]
G4ZZW8_PHYSP9.640e-5245.18Purple acid phosphatase n=1 Tax=Phytophthora sojae... [more]
M4BQC8_HYAAE2.540e-5143.86Purple acid phosphatase n=1 Tax=Hyaloperonospora a... [more]
A0A8K1CPI6_PYTOL3.700e-5141.33Uncharacterized protein n=2 Tax=Pythium oligandrum... [more]
D0NUG5_PHYIT1.520e-5045.18Purple acid phosphatase n=15 Tax=Phytophthora TaxI... [more]
A0A3R7K290_9STRA6.760e-5043.42Purple acid phosphatase n=6 Tax=Phytophthora kerno... [more]
A0A6G0QDG4_9STRA7.340e-5043.86Purple acid phosphatase n=10 Tax=Phytophthora TaxI... [more]
G4ZZW7_PHYSP2.830e-4943.42Purple acid phosphatase n=7 Tax=Phytophthora TaxID... [more]
A0A225WSV4_9STRA2.850e-4942.98Purple acid phosphatase n=1 Tax=Phytophthora megak... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig82316contigM-pyrifera_M_contig82316:2..658 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-19
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score183.3
Seed ortholog evalue1.2e-43
Seed eggNOG ortholog36331.EPrPI00000024179
KEGG rclassRC00017
KEGG koko:K01078,ko:K22390
KEGG ReactionR00548,R02135
KEGG Pathwayko00730,ko00740,ko01100,map00730,map00740,map01100
Hectar predicted targeting categoryother localisation
EggNOG free text desc.Calcineurin-like phosphoesterase. Source PGD
EggNOG OGs1MIXM@121069,COG1409@1,KOG1378@2759
EC3.1.3.2
COG Functional cat.G
Best tax levelPythiales
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko01000
Exons1
Model size657
Cds size639
Stop1
Start1
Relationships

The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622816730.2702448-UTR-M-pyrifera_M_contig82316:1..191622816730.2702448-UTR-M-pyrifera_M_contig82316:1..19Macrocystis pyrifera P11B4 maleUTRM-pyrifera_M_contig82316 2..19 +
1692278144.8516386-UTR-M-pyrifera_M_contig82316:1..191692278144.8516386-UTR-M-pyrifera_M_contig82316:1..19Macrocystis pyrifera P11B4 maleUTRM-pyrifera_M_contig82316 2..19 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622816730.2846985-CDS-M-pyrifera_M_contig82316:19..6581622816730.2846985-CDS-M-pyrifera_M_contig82316:19..658Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig82316 20..658 +
1692278144.866729-CDS-M-pyrifera_M_contig82316:19..6581692278144.866729-CDS-M-pyrifera_M_contig82316:19..658Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig82316 20..658 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig82316.19254.1prot_M-pyrifera_M_contig82316.19254.1Macrocystis pyrifera P11B4 malepolypeptideM-pyrifera_M_contig82316 20..658 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_M-pyrifera_M_contig82316.19254.1

>prot_M-pyrifera_M_contig82316.19254.1 ID=prot_M-pyrifera_M_contig82316.19254.1|Name=mRNA_M-pyrifera_M_contig82316.19254.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=213bp
MPSAESGGVENMWWSMAYGAASFIFIDSETDFPGAPGDSYNLRPNGNFGD
QLKWFEMALQRANSTRATRPWIIVSGHRPVYSLDACNDAGVPVGAAADFQ
KAFEHLLLQYKVDLYLAGHVHGSELSYPTRNNVPIQKHWNGAAAPTYAII
GGAGNIEGLTNYTHDPQNVPWNAYVNGNDEILCKLTVSPQNLTLQYFISQ
TAALDHQVVITK*
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mRNA from alignment at M-pyrifera_M_contig82316:2..658+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_M-pyrifera_M_contig82316.19254.1 ID=mRNA_M-pyrifera_M_contig82316.19254.1|Name=mRNA_M-pyrifera_M_contig82316.19254.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=657bp|location=Sequence derived from alignment at M-pyrifera_M_contig82316:2..658+ (Macrocystis pyrifera P11B4 male)
TACAATGCTCGGTTCCGCATGCCAAGCGCCGAGAGCGGGGGTGTGGAGAA CATGTGGTGGTCCATGGCGTACGGCGCCGCCTCCTTCATCTTCATCGACT CGGAAACCGATTTCCCAGGGGCCCCAGGCGACTCGTACAACCTGCGGCCC AACGGAAACTTTGGAGACCAGCTCAAGTGGTTCGAGATGGCTCTGCAACG CGCCAACAGCACCAGAGCCACGCGCCCCTGGATCATCGTGTCGGGACATC GCCCAGTGTACTCGCTCGACGCGTGCAACGACGCAGGAGTGCCTGTGGGG GCAGCCGCAGATTTCCAAAAGGCATTCGAGCACCTCTTGCTGCAGTACAA GGTGGACCTGTACCTCGCTGGCCACGTGCACGGATCAGAGCTCTCCTACC CCACACGCAACAACGTCCCCATCCAGAAGCACTGGAACGGCGCCGCCGCT CCCACCTACGCCATCATCGGAGGCGCAGGCAACATCGAAGGCCTCACCAA CTACACGCACGACCCGCAAAACGTGCCGTGGAACGCCTACGTCAACGGAA ACGACGAGATCCTCTGCAAACTCACCGTCTCCCCGCAAAACCTCACCCTC CAGTACTTCATCTCGCAAACCGCCGCCCTCGACCACCAGGTCGTCATCAC AAAGTGA
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Coding sequence (CDS) from alignment at M-pyrifera_M_contig82316:2..658+

>mRNA_M-pyrifera_M_contig82316.19254.1 ID=mRNA_M-pyrifera_M_contig82316.19254.1|Name=mRNA_M-pyrifera_M_contig82316.19254.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=1278bp|location=Sequence derived from alignment at M-pyrifera_M_contig82316:2..658+ (Macrocystis pyrifera P11B4 male)
ATGCCAAGCGCCGAGAGCGGGGGTGTGGAGAACATGTGGTGGTCCATGGC
GTACGGCGCCGCCTCCTTCATCTTCATCGACTCGGAAACCGATTTCCCAG
GGGCCCCAGGCGACTCGTACAACCTGCGGCCCAACGGAAACTTTGGAGAC
CAGCTCAAGTGGTTCGAGATGGCTCTGCAACGCGCCAACAGCACCAGAGC
CACGCGCCCCTGGATCATCGTGTCGGGACATCGCCCAGTGTACTCGCTCG
ACGCGTGCAACGACGCAGGAGTGCCTGTGGGGGCAGCCGCAGATTTCCAA
AAGGCATTCGAGCACCTCTTGCTGCAGTACAAGGTGGACCTGTACCTCGC
TGGCCACGTGCACGGATCAGAGCTCTCCTACCCCACACGCAACAACGTCC
CCATCCAGAAGCACTGGAACGGCGCCGCCGCTCCCACCTACGCCATCATC
GGAGGCGCAGGCAACATCGAAGGCCTCACCAACTACACGCACGACCCGCA
AAACGTGCCGTGGAACGCCTACGTCAACGGAAACGACGAGATCCTCTGCA
AACTCACCGTCTCCCCGCAAAACCTCACCCTCCAGTACTTCATCTCGCAA
ACCGCCGCCCTCGACCACCAGGTCGTCATCACAAAGTGAATGCCAAGCGC
CGAGAGCGGGGGTGTGGAGAACATGTGGTGGTCCATGGCGTACGGCGCCG
CCTCCTTCATCTTCATCGACTCGGAAACCGATTTCCCAGGGGCCCCAGGC
GACTCGTACAACCTGCGGCCCAACGGAAACTTTGGAGACCAGCTCAAGTG
GTTCGAGATGGCTCTGCAACGCGCCAACAGCACCAGAGCCACGCGCCCCT
GGATCATCGTGTCGGGACATCGCCCAGTGTACTCGCTCGACGCGTGCAAC
GACGCAGGAGTGCCTGTGGGGGCAGCCGCAGATTTCCAAAAGGCATTCGA
GCACCTCTTGCTGCAGTACAAGGTGGACCTGTACCTCGCTGGCCACGTGC
ACGGATCAGAGCTCTCCTACCCCACACGCAACAACGTCCCCATCCAGAAG
CACTGGAACGGCGCCGCCGCTCCCACCTACGCCATCATCGGAGGCGCAGG
CAACATCGAAGGCCTCACCAACTACACGCACGACCCGCAAAACGTGCCGT
GGAACGCCTACGTCAACGGAAACGACGAGATCCTCTGCAAACTCACCGTC
TCCCCGCAAAACCTCACCCTCCAGTACTTCATCTCGCAAACCGCCGCCCT
CGACCACCAGGTCGTCATCACAAAGTGA
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