mRNA_M-pyrifera_M_contig82200.19226.1 (mRNA) Macrocystis pyrifera P11B4 male
Overview
Homology
BLAST of mRNA_M-pyrifera_M_contig82200.19226.1 vs. uniprot
Match: A0A7W1VW89_9BACT (Immunoglobulin domain-containing protein n=1 Tax=Verrucomicrobia bacterium TaxID=2026799 RepID=A0A7W1VW89_9BACT) HSP 1 Score: 67.0 bits (162), Expect = 1.620e-10 Identity = 39/101 (38.61%), Postives = 53/101 (52.48%), Query Frame = 1 Query: 46 EIRTGAERALRQAGYNLWEYEYQSICYPNMGWYSWAGLGNMPGPYSWINSLYGWT--VISHEHGHNAGLPHANYGDT------------EYGDVTDIMGGA 306 ++R A A AGY L Y++ IC + ++WAGLG + P SWI + Y V +HE GHN GL HAN+ DT EYGD+ + MG + Sbjct: 385 QVRNDARTAAAAAGYVLTNYQFDVICMGLVPGFTWAGLGYVGQPGSWIRASYATHGGVTAHELGHNFGLNHANFWDTGGSSVIGSGASVEYGDIFENMGSS 485
BLAST of mRNA_M-pyrifera_M_contig82200.19226.1 vs. uniprot
Match: A0A5A8CGJ6_CAFRO (Peptidase_M11 domain-containing protein n=3 Tax=Sar TaxID=2698737 RepID=A0A5A8CGJ6_CAFRO) HSP 1 Score: 60.8 bits (146), Expect = 2.260e-8 Identity = 34/90 (37.78%), Postives = 50/90 (55.56%), Query Frame = 1 Query: 94 LWEYEYQSICYPNMGWYSWAGLGNMPGPYSWINSLY---GWTVISHEHGHNAGLPHANYGDTEYGDVTDIMGGAWGPGDFHPLYKMGMHW 354 L ++++QSI +P++ +SWAGL PG + W+ Y + VI HE+GHN GL HA + YG+ D MG G + K +HW Sbjct: 419 LSDWDHQSITFPDINTFSWAGLAQAPGSFVWLQGGYRGAAYAVI-HENGHNLGLLHAGFLTNGYGNQNDNMG-CCKRGHWFTQRKAALHW 506
BLAST of mRNA_M-pyrifera_M_contig82200.19226.1 vs. uniprot
Match: A0A5A8CE23_CAFRO (EGF_CA domain-containing protein n=3 Tax=Cafeteria roenbergensis TaxID=33653 RepID=A0A5A8CE23_CAFRO) HSP 1 Score: 60.8 bits (146), Expect = 2.380e-8 Identity = 34/90 (37.78%), Postives = 50/90 (55.56%), Query Frame = 1 Query: 94 LWEYEYQSICYPNMGWYSWAGLGNMPGPYSWINSLY---GWTVISHEHGHNAGLPHANYGDTEYGDVTDIMGGAWGPGDFHPLYKMGMHW 354 L ++++QSI +P++ +SWAGL PG + W+ Y + VI HE+GHN GL HA + YG+ D MG G + K +HW Sbjct: 338 LSDWDHQSITFPDINTFSWAGLAQAPGSFVWLQGGYRGAAYAVI-HENGHNLGLLHAGFLTNGYGNQNDNMG-CCKRGHWFTQRKAALHW 425
BLAST of mRNA_M-pyrifera_M_contig82200.19226.1 vs. uniprot
Match: A0A5A8C026_CAFRO (TNFR-Cys domain-containing protein n=1 Tax=Cafeteria roenbergensis TaxID=33653 RepID=A0A5A8C026_CAFRO) HSP 1 Score: 60.8 bits (146), Expect = 2.410e-8 Identity = 34/90 (37.78%), Postives = 50/90 (55.56%), Query Frame = 1 Query: 94 LWEYEYQSICYPNMGWYSWAGLGNMPGPYSWINSLY---GWTVISHEHGHNAGLPHANYGDTEYGDVTDIMGGAWGPGDFHPLYKMGMHW 354 L ++++QSI +P++ +SWAGL PG + W+ Y + VI HE+GHN GL HA + YG+ D MG G + K +HW Sbjct: 283 LSDWDHQSITFPDINTFSWAGLAQAPGSFVWLQGGYRGAAYAVI-HENGHNLGLLHAGFLTNGYGNQNDNMG-CCKRGHWFTQRKAALHW 370
BLAST of mRNA_M-pyrifera_M_contig82200.19226.1 vs. uniprot
Match: UPI000D591C4E (LPXTG cell wall anchor domain-containing protein n=1 Tax=Streptomyces fragilis TaxID=67301 RepID=UPI000D591C4E) HSP 1 Score: 58.9 bits (141), Expect = 9.920e-8 Identity = 38/89 (42.70%), Postives = 50/89 (56.18%), Query Frame = 1 Query: 43 GEIRTGAERALRQAGYNLWE-YEYQSICYP-NMGWYSWAGLGNMPGPYSWINSLYGWT----VISHEHGHNAGLPHANYGDTEYGDVTD 291 GEI T ++AL + G E Y+ S+ +P SWAGLG++PGPY+WIN LYG V+ HE GHN GL H G++ D Sbjct: 109 GEINTLTQKALAEQGLVRGEDYDSLSMVFPAQKTGCSWAGLGSVPGPYTWIN-LYGTASGLGVVGHEFGHNLGLGHQMRSVCTDGNLVD 196
BLAST of mRNA_M-pyrifera_M_contig82200.19226.1 vs. uniprot
Match: A0A7X7K9N5_9ACTO (Fibronectin type-III domain-containing protein n=1 Tax=Actinomycetales bacterium TaxID=1911520 RepID=A0A7X7K9N5_9ACTO) HSP 1 Score: 58.2 bits (139), Expect = 1.940e-7 Identity = 28/69 (40.58%), Postives = 36/69 (52.17%), Query Frame = 1 Query: 151 AGLGNMPGPYSWINSLYGWTVISHEHGHNAGLPHANYGD-------------------TEYGDVTDIMG 300 AG+G+MPG Y+W+N +++HE GHN GL HANY + EYGD TD MG Sbjct: 212 AGVGSMPGRYTWLNGFIDTDIVTHELGHNLGLEHANYAECASSRTKRITFGKSKRCTMVEYGDTTDTMG 280
BLAST of mRNA_M-pyrifera_M_contig82200.19226.1 vs. uniprot
Match: A0A2M9I1E4_9ACTN (GRAM_POS_ANCHORING domain-containing protein n=9 Tax=Streptomyces TaxID=1883 RepID=A0A2M9I1E4_9ACTN) HSP 1 Score: 57.8 bits (138), Expect = 2.520e-7 Identity = 38/89 (42.70%), Postives = 47/89 (52.81%), Query Frame = 1 Query: 43 GEIRTGAERALRQAGYNLWE-YEYQSICYP-NMGWYSWAGLGNMPGPYSWINSLYGWT----VISHEHGHNAGLPHANYGDTEYGDVTD 291 G I + + AL G E YE SI +P +WAGLG++PGPY+WIN LYG V+ HE GHN GL H GD+ D Sbjct: 110 GRINSLTQEALAAKGLVRGEDYESLSIIFPAQKAGCAWAGLGSVPGPYTWIN-LYGTASGLGVLGHEFGHNLGLGHQGRAMCTDGDLVD 197
BLAST of mRNA_M-pyrifera_M_contig82200.19226.1 vs. uniprot
Match: A0A239KD89_9MICO (Gametolysin peptidase M11 n=1 Tax=Micrococcales bacterium KH10 TaxID=1945885 RepID=A0A239KD89_9MICO) HSP 1 Score: 57.8 bits (138), Expect = 2.700e-7 Identity = 39/110 (35.45%), Postives = 51/110 (46.36%), Query Frame = 1 Query: 37 SSGEIRTGAERALRQAG-----YNLWEYEYQSICYPNMG-WYSWAGLGNMPGPYSWINSLYGWTVISHEHGHNAGLPHANYGDT----------------EYGDVTDIMG 300 S ++R +RA R A +N + I +P+ SWAG G MPG Y W+N TV++HE GHN GL HAN EYGD+ D+MG Sbjct: 220 SCNDVRLIGQRATRAAAARNRAHNADRFNRVVIYFPHSSSCASWAGRGEMPGKYVWLNGAKQATVLAHELGHNFGLGHANVVQCNKSRTLTRRGHGCKSHEYGDLGDLMG 329
BLAST of mRNA_M-pyrifera_M_contig82200.19226.1 vs. uniprot
Match: A0A652KTD7_9ACTN (GRAM_POS_ANCHORING domain-containing protein n=2 Tax=unclassified Streptomyces TaxID=2593676 RepID=A0A652KTD7_9ACTN) HSP 1 Score: 56.6 bits (135), Expect = 5.910e-7 Identity = 37/87 (42.53%), Postives = 46/87 (52.87%), Query Frame = 1 Query: 49 IRTGAERALRQAGYNLWE-YEYQSICYP-NMGWYSWAGLGNMPGPYSWINSLYGWT----VISHEHGHNAGLPHANYGDTEYGDVTD 291 I T AL G + E YE S+ +P +WAGLG++PGPY+WIN LYG V+ HE GHN GL H GD+ D Sbjct: 11 INTLTREALAAQGLVMGEDYESLSVIFPAQKTGCAWAGLGSVPGPYTWIN-LYGTAGGLGVLGHEFGHNLGLGHQGRSMCTDGDLVD 96
BLAST of mRNA_M-pyrifera_M_contig82200.19226.1 vs. uniprot
Match: UPI001923612D (hypothetical protein n=2 Tax=Streptomyces TaxID=1883 RepID=UPI001923612D) HSP 1 Score: 56.6 bits (135), Expect = 6.390e-7 Identity = 37/87 (42.53%), Postives = 46/87 (52.87%), Query Frame = 1 Query: 49 IRTGAERALRQAGYNLWE-YEYQSICYP-NMGWYSWAGLGNMPGPYSWINSLYGWT----VISHEHGHNAGLPHANYGDTEYGDVTD 291 I T AL G + E YE S+ +P +WAGLG++PGPY+WIN LYG V+ HE GHN GL H GD+ D Sbjct: 112 INTLTREALAAQGLVMGEDYESLSVIFPAQKTGCAWAGLGSVPGPYTWIN-LYGTAGGLGVLGHEFGHNLGLGHQGRSMCTDGDLVD 197 The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig82200.19226.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90) Total hits: 15
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_M-pyrifera_M_contig82200.19226.1 >prot_M-pyrifera_M_contig82200.19226.1 ID=prot_M-pyrifera_M_contig82200.19226.1|Name=mRNA_M-pyrifera_M_contig82200.19226.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=116bp MPDVTSSTTPSSGEIRTGAERALRQAGYNLWEYEYQSICYPNMGWYSWAGback to top mRNA from alignment at M-pyrifera_M_contig82200:564..917+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_M-pyrifera_M_contig82200.19226.1 ID=mRNA_M-pyrifera_M_contig82200.19226.1|Name=mRNA_M-pyrifera_M_contig82200.19226.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=354bp|location=Sequence derived from alignment at M-pyrifera_M_contig82200:564..917+ (Macrocystis pyrifera P11B4 male)back to top Coding sequence (CDS) from alignment at M-pyrifera_M_contig82200:564..917+ >mRNA_M-pyrifera_M_contig82200.19226.1 ID=mRNA_M-pyrifera_M_contig82200.19226.1|Name=mRNA_M-pyrifera_M_contig82200.19226.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=696bp|location=Sequence derived from alignment at M-pyrifera_M_contig82200:564..917+ (Macrocystis pyrifera P11B4 male)back to top |