mRNA_M-pyrifera_M_contig82186.19220.1 (mRNA) Macrocystis pyrifera P11B4 male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_M-pyrifera_M_contig82186.19220.1
Unique NamemRNA_M-pyrifera_M_contig82186.19220.1
TypemRNA
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Homology
BLAST of mRNA_M-pyrifera_M_contig82186.19220.1 vs. uniprot
Match: A0A7Y2N7L7_9ACTN (DNA polymerase I n=1 Tax=Acidimicrobiales bacterium TaxID=2201156 RepID=A0A7Y2N7L7_9ACTN)

HSP 1 Score: 390 bits (1003), Expect = 3.940e-127
Identity = 200/304 (65.79%), Postives = 237/304 (77.96%), Query Frame = 1
Query:    1 RFKHLRQIAKAMNFGIAYGSGASALGRSLTSEGSPTTREEASRLLAQYRRTYPGTASWAEARIAEIRDISGKTTSIDWPLSLRLAGGFREVSSIRRSFRSSQNRWPTAAEIAELHPDRHQRDLAELTESISWLLGYSAPVALEADGTPFTFSSRTLSGRRQQFNLHLDRLLMNAAIEAIQSESKDLIAVRTRFEDVHGIELSEGGAPFTEAELGRVFEDRPQRLRYIEMIARDLGDDTAHALLGRSARERVSVMVNAWRNAPIQGGVADIMLAGYADLDTRLRNYPGAVPVQTVHDSIVIECDR 912
            R KHLRQIAKA+NFGIAYG+GA+AL RSLT+EGSPTT EEA+RLLAQYR TYPGTA+WAE RIAE+++I  +T++IDW +++RLA GF  V+ IRR FR SQ R+P+A E+A LHP +H +    L   + WLLGYSAPVAL  DGTPFTFSSRTL+GRRQQFNLHLDRL ++A + AIQSES +L+ VR+RFE  HG+ L     P + AEL + FEDR  R RYIE I  DLG +     L RSA+ERVS MVNAWRNAPIQGGVADIML+ YADL  RL+ YP A PVQTVHDS+VIECD 
Sbjct:  443 RLKHLRQIAKALNFGIAYGTGAAALSRSLTAEGSPTTVEEAARLLAQYRITYPGTAAWAEQRIAEVKEIRTETSAIDWTVTMRLARGFSTVARIRREFRQSQGRYPSAEEVAGLHPSQHLQTADRLVAEVDWLLGYSAPVALLDDGTPFTFSSRTLAGRRQQFNLHLDRLFLDAVLAAIQSESPELMRVRSRFEADHGVVLHHQTVPMSTAELSKQFEDRSLRHRYIEAIRADLGRNVIIPFLERSAQERVSAMVNAWRNAPIQGGVADIMLSAYADLHQRLQRYPSARPVQTVHDSVVIECDH 746          
BLAST of mRNA_M-pyrifera_M_contig82186.19220.1 vs. uniprot
Match: A0A7Y2DK37_9ACTN (DNA polymerase I n=1 Tax=Acidimicrobiales bacterium TaxID=2201156 RepID=A0A7Y2DK37_9ACTN)

HSP 1 Score: 349 bits (896), Expect = 1.970e-111
Identity = 184/305 (60.33%), Postives = 222/305 (72.79%), Query Frame = 1
Query:    1 RFKHLRQIAKAMNFGIAYGSGASALGRSLTSEGSPTTREEASRLLAQYRRTYPGTASWAEARIAEIRDISGKTTSIDWPLSLRLAGGFREVSSIRRSFRSSQNRWPTAAEIAELHPDRHQRDLAELTESISWLLGYSAPVALEADGTPFTFSSRTLSGRRQQFNLHLDRLLMNAAIEAIQSESKDLIAVRTRFEDVHGIELSEGGAPFTEAELGRVFEDRPQRLRYIEMIARDLGDDTAHALLGRSARERVSVMVNAWRNAPIQGGVADIMLAGYADLDTRLRNYPGAVPVQTVHDSIVIECDRS 915
            R + LRQIAKA+NFGIAYGSGA+AL RSLT+EG+ T+ +EA+ LLAQYR TYPGTA+WA+AR+AEI+D+   T +IDW  +++LA  +  VS IRR FR    RWPT  EIAELHPDR   D   L ESI+W+  YSAPVAL   G PFTF+SRTL+GRRQQFNLHLDRL + A  +A++S+    + VR  FE  HGI+LS   A  ++A L R FEDR  R  Y+E  A  +G   A  LL R+A ERV+ MVNAWRNAPIQGGVADIML  YA+L  RLR Y  A PVQTVHDS+VIECDR+
Sbjct:  443 RLRRLRQIAKALNFGIAYGSGAAALSRSLTAEGAETSVDEATELLAQYRLTYPGTAAWAQARVAEIKDLRRTTDAIDWRATMKLARSYPVVSKIRREFRKGNWRWPTVDEIAELHPDRLDHDSDSLRESIAWISRYSAPVALMHGGEPFTFASRTLAGRRQQFNLHLDRLFLAAVRDAVRSDDPARVDVRLTFEREHGIDLSCDAARTSDAYLERQFEDRSLRRAYVEAFAAGMGTTAADQLLTRAASERVAAMVNAWRNAPIQGGVADIMLCAYAELGDRLRAYRTAKPVQTVHDSVVIECDRA 747          
BLAST of mRNA_M-pyrifera_M_contig82186.19220.1 vs. uniprot
Match: A0A351EQ77_9ACTN (DNA-directed DNA polymerase (Fragment) n=1 Tax=Acidimicrobiaceae bacterium TaxID=2024894 RepID=A0A351EQ77_9ACTN)

HSP 1 Score: 273 bits (698), Expect = 2.860e-86
Identity = 141/259 (54.44%), Postives = 183/259 (70.66%), Query Frame = 1
Query:    1 RFKHLRQIAKAMNFGIAYGSGASALGRSLTSEGSPTTREEASRLLAQYRRTYPGTASWAEARIAEIRDISGKTT-SIDWPLSLRLAGGFREVSSIRRSFRSSQNRWPTAAEIAELHPDRHQRDLAELTESISWLLGYSAPVALEADGTPFTFSSRTLSGRRQQFNLHLDRLLMNAAIEAIQSESKDLIAVRTRFEDVHGIELSEGGAPFTEAELGRVFEDRPQRLRYIEMIARDLGDDTAHALLGRSARERVSVMVNAW 774
            RFK LRQIAKA+NFGIAYG+GA+AL RSLT  G+PTT ++   LL +YR+ YPGTA+WAE RIAEI  I      +IDWP +LRLA  F +V+S+RR FR ++NRWP A EIA++          +    + W+LGYSA VAL  +G PFTFSS T++GRRQQFNLH+DRL ++A I+A+   S+ LIA+RT+F + H + L   G P TE+EL R FE+R  R +Y+E +    G+D AHA L R+A+ERVS MVNAW
Sbjct:  146 RFKELRQIAKALNFGIAYGTGAAALARSLTGNGTPTTLDQGHDLLDKYRQAYPGTAAWAEERIAEIEHIRNTVPGAIDWPSTLRLANNFGDVNSVRREFRKTRNRWPAAEEIADILHGPGGGPTEDQVAMVQWVLGYSATVALRPNGEPFTFSSFTVAGRRQQFNLHVDRLFLHAVIDAVGGSSQPLIALRTQFAEEHHLVLHRRGEPLTESELARQFEERALRRKYLEAVTDTCGEDVAHAYLTRAAKERVSSMVNAW 404          
BLAST of mRNA_M-pyrifera_M_contig82186.19220.1 vs. uniprot
Match: A0A7C1Y639_9ACTN (DNA polymerase I n=1 Tax=Acidimicrobiales bacterium TaxID=2201156 RepID=A0A7C1Y639_9ACTN)

HSP 1 Score: 221 bits (563), Expect = 1.260e-62
Identity = 127/305 (41.64%), Postives = 164/305 (53.77%), Query Frame = 1
Query:    1 RFKHLRQIAKAMNFGIAYGSGASALGRSLTSEGSPTTREEASRLLAQYRRTYPGTASWAEARIAEIRDISGKTTSIDWPLSLRLAGGFREVSSIRRSFRSSQNRWPTAAEIA---ELHPDRHQRDLAELTESISWLLGYSAPVALEADGTPFTFSSRTLSGRRQQFNLHLDRLLMNAAIEAIQSESKDLIAVRTRFEDVHGIELSEGGAPFTEAELGRVFEDRPQRLRYIEMIARDLGDDTAHALLGRSARERVSVMVNAWRNAPIQGGVADIMLAGYADLDTRLRNYPGAVPVQTVHDSIVIEC 906
            R    R  AK +NFGI YG     L  SLT  G  T+ EE  +LL  Y   YPG A WA  R   I D++ +   +DW  +L L   +  +  +RR+FR +  RWPTAAEIA    L P       A   + I W LG+ APV L   G PF F SRT++ RRQQF +  DR+L+ A +  I+S+   L+  R RF   H +++ +   P     L +V E+R  R  Y E IAR  G       L  S R  + VM NA+RNAP+QGGVAD MLA YA +   L  +  A  VQTVHDS+V+EC
Sbjct:  461 RHAEYRAKAKRINFGIVYGQRGRGLALSLTQSGVETSTEEGRKLLEAYLAAYPGVARWARGRDEFIEDLARRPGPVDWSSTLELHSVWARIRGLRRAFRHTHRRWPTAAEIAGELALEPGE-----APGVDRIEWALGFEAPVVLTPGGEPFGFCSRTVARRRQQFTISTDRVLLGAVLRGIESDLPALVGHRARFGRTHEVDIGDSAGPAPRPHLEKVLENRSLRRSYAEDIARIAGRSVLEDFLDSSLRASIRVMANAYRNAPVQGGVADAMLAAYALVHDALGRFDEAFGVQTVHDSVVVEC 760          
BLAST of mRNA_M-pyrifera_M_contig82186.19220.1 vs. uniprot
Match: A0A2E9XEE9_9ACTN (DNA polymerase I n=2 Tax=Actinobacteria TaxID=201174 RepID=A0A2E9XEE9_9ACTN)

HSP 1 Score: 213 bits (541), Expect = 1.610e-59
Identity = 125/301 (41.53%), Postives = 171/301 (56.81%), Query Frame = 1
Query:   16 RQIAKAMNFGIAYGSGASALGRSLTSEGSPTTREEASRLLAQYRRTYPGTASWAEARIAEIRDISGKTTSIDWPLSLRLAGGFREVSSIRRSFRSSQNRWPTAAEIA-ELHPDRHQRDLAELTESISWLLGYSAPVALEADGTPFTFSSRTLSGRRQQFNLHLDRLLMNAAIEAIQSESKDLIAVRTRFEDVHGIELSEGGAPFTEAELGRVFEDRPQRLRYIEMIARDLGDDTAHALLGRSARERVSVMVNAWRNAPIQGGVADIMLAGYADLDTRLRNYPGAVPVQTVHDSIVIECDRS 915
            R  AK +NFGI YG   + L RSLT  G PT+ EE + LL  Y   YP  ASW + R   I  ++  T  IDW L+ +L   F  V + RR FR S  RWP+A E+  EL      RD  +L E I+W L + APV L  +  P+ FSS TL+GRRQQF LH + ++  +A   +QS+      V+ +    + I  +   + ++E E  R+ E+R  R   +E +   +G D    LL ++ R+ +  + NA+RNAPIQGGVADIML  Y  L  +L+ +  AV VQTVHDS+VIEC RS
Sbjct:  465 RNKAKKINFGIVYGQRGAGLARSLTQSGVPTSTEEGTTLLDAYLTAYPDIASWLKDRDQFIEQLASSTLEIDWELTFKLHSMFGPVRAARRQFRDSYRRWPSAEELLIEL------RDDWKLDE-IAWTLSFHAPVVLNLEAEPYQFSSHTLAGRRQQFTLHTEGVIERSATRLMQSDKSGPKQVKDKILSQYQISHASSASEYSEIETKRLLENRSFRRSLVEEVRESMGADAWTLLLDQALRDGIRRLANAYRNAPIQGGVADIMLDAYGQLYEKLQIFDRAVGVQTVHDSVVIECSRS 758          
BLAST of mRNA_M-pyrifera_M_contig82186.19220.1 vs. uniprot
Match: A0A3B9QI02_9ACTN (DNA polymerase I n=3 Tax=Acidimicrobiaceae bacterium TaxID=2024894 RepID=A0A3B9QI02_9ACTN)

HSP 1 Score: 203 bits (517), Expect = 4.010e-56
Identity = 122/309 (39.48%), Postives = 160/309 (51.78%), Query Frame = 1
Query:    4 FKHLRQIAKAMNFGIAYGSGASALGRSLTSEGSPTTREEASRLLAQYRRTYPGTASWAEARIAEIRDISGKTTSIDWPLSLRLAGGFREVSSIRRSFRSSQNRWPTAAEIAELHPDRHQRDLAEL-----TESISWLLGYSAPVALEADGTPFTFSSRTLSGRRQQFNLHLDRLLMNAAIEAIQSESKDLIAVRTRFEDVHGIELSEGGAPFTEAELGRVFEDRPQRLRYIEMIARDLGDDTAHALLGRSARERVSVMVNAWRNAPIQGGVADIMLAGYADLDTRLRNYPGAVPVQTVHDSIVIECDRS 915
            F   R  AK +NFGI YG     L RSL+  G  T  EE   LL QY   YP  ASW   R   +  ++     IDWPL+L L   +  V    R  R     WP A E+           LA L      E ++W L + A V ++++G  F F+S T SGRRQQF  H + +L  AA   I S       VR +  D + +EL   G P +  E+ ++ EDR  R   IE + + +G +  + LL RS   R+S M NA+RNAPIQGGVADIML  Y  L  RL  +  A+ VQTVHDS+V+EC+R+
Sbjct:  464 FNEYRDKAKRINFGIVYGQRGGGLARSLSQAGVETNDEEGRVLLEQYLNAYPQIASWVNDRDNFVDQLATSHDEIDWPLTLLLHKTWPLVRQAVRQHRDEHRNWPRAEEV-----------LARLGSPWTIEEVAWSLSFEASVVIDSEGEVFGFNSLTESGRRQQFTFHTEGILEQAAKTIIGSPKDGPRLVREQISDRYNLELRNAGQPLSSVEITKILEDRKIRRAVIEQVEQTMGQEAMNLLLNRSLETRISQMANAYRNAPIQGGVADIMLEAYGLLHNRLAPFDRALGVQTVHDSVVVECNRN 761          
BLAST of mRNA_M-pyrifera_M_contig82186.19220.1 vs. uniprot
Match: A0A3B9J389_9ACTN (POLAc domain-containing protein (Fragment) n=2 Tax=Acidimicrobiaceae bacterium TaxID=2024894 RepID=A0A3B9J389_9ACTN)

HSP 1 Score: 196 bits (498), Expect = 1.230e-54
Identity = 116/305 (38.03%), Postives = 159/305 (52.13%), Query Frame = 1
Query:    1 RFKHLRQIAKAMNFGIAYGSGASALGRSLTSEGSPTTREEASRLLAQYRRTYPGTASWAEARIAEIRDISGKTTSIDWPLSLRLAGGFREVSSIRRSFRSSQNRWPTAAEIAELHPDRHQRDLAELTESISWLLGYSAPVALEADGTPFTFSSRTLSGRRQQFNLHLDRLLMNAAIEAIQSESKDLIAVRTRFEDVHGIELSEGGAPFTEAELGRVFEDRPQRLRYIEMIARDLGDDTAHALLGRSARERVSVMVNAWRNAPIQGGVADIMLAGYADLDTRLRNYPGAVPVQTVHDSIVIECDRS 915
            ++   R  AK +NFGI YG   S L RSL+  G  T+  E + LL QY   YP  ASW   R   +  I+     IDW L+L+L   +  V    R  R     WPTA E+ E      +   +   + ++W+L + A V ++ +G  F F+S T SGRRQQF  H + +L  AA   + S  +    VR        I L + G   T A++ +V EDR  R + +E +   +G D    LL +S   R+S M NA+RNAPIQGGVAD+ML  Y  L  RL  +  A  VQTVHDS+V+EC R+
Sbjct:  249 QYSEYRDKAKRINFGIVYGQRGSGLARSLSQSGVETSEAEGAALLDQYLDAYPQIASWVSERDRFVEQIATSDKEIDWKLTLQLHKRWPLVRQAVRQHRHEHRNWPTAEEVTE------RLGTSWGIDEVAWILSFEASVVIDNEGRSFGFNSFTQSGRRQQFTFHTEGVLEQAAKTIMASSKEGPRKVREVLTARQNISLEKEGKLLTAADISKVLEDRTLRRQIVEEVEASMGSDALALLLDKSLNTRISQMANAYRNAPIQGGVADVMLEAYGLLHMRLAAFSEAFGVQTVHDSVVVECHRN 547          
BLAST of mRNA_M-pyrifera_M_contig82186.19220.1 vs. uniprot
Match: A0A2D9RN08_9ACTN (DNA polymerase I n=5 Tax=Actinobacteria TaxID=201174 RepID=A0A2D9RN08_9ACTN)

HSP 1 Score: 198 bits (504), Expect = 2.700e-54
Identity = 119/304 (39.14%), Postives = 158/304 (51.97%), Query Frame = 1
Query:    4 FKHLRQIAKAMNFGIAYGSGASALGRSLTSEGSPTTREEASRLLAQYRRTYPGTASWAEARIAEIRDISGKTTSIDWPLSLRLAGGFREVSSIRRSFRSSQNRWPTAAEIAELHPDRHQRDLAELTESISWLLGYSAPVALEADGTPFTFSSRTLSGRRQQFNLHLDRLLMNAAIEAIQSESKDLIAVRTRFEDVHGIELSEGGAPFTEAELGRVFEDRPQRLRYIEMIARDLGDDTAHALLGRSARERVSVMVNAWRNAPIQGGVADIMLAGYADLDTRLRNYPGAVPVQTVHDSIVIECDRS 915
            F  LR  AK +NFGI YG     L RSL+  G  T  EE  +LL QY   YP  ASW   R   I  ++   T IDW L+L L   +  V    R  R     WPTA ++ +L  + +          ++W L + A V ++  G  F F+S T SGRRQQF  H + +L  AA   + S  +    VR    D H   L       + AE+ +V E+R  R   ++ +   +G D+   LL +S   ++S M NA+RNAPIQGGVADIML  YA L  RL  +  AV VQTVHDS+VIEC+R+
Sbjct:  464 FNDLRDKAKRINFGIVYGQRGGGLARSLSQAGVETNDEEGRQLLDQYLAAYPKIASWVADRDKFIDQLASSHTEIDWGLTLNLHTLWPVVRRAMREHRDQHRNWPTAEQVKDLLGENYS------INEVAWALSFEASVVVDQHGETFGFNSFTESGRRQQFTFHTESILEQAAKTIVSSPKEGPKQVRINIADRHKRNLEGESGLLSAAEITKVLEERSLRRAIVDEVNDSMGRDSMLLLLNKSLTAKISQMANAYRNAPIQGGVADIMLEAYAFLSERLTRFERAVGVQTVHDSVVIECNRA 761          
BLAST of mRNA_M-pyrifera_M_contig82186.19220.1 vs. uniprot
Match: A0A7C7THJ9_9ACTN (DNA polymerase I n=5 Tax=Bacteria TaxID=2 RepID=A0A7C7THJ9_9ACTN)

HSP 1 Score: 196 bits (498), Expect = 1.890e-53
Identity = 118/300 (39.33%), Postives = 157/300 (52.33%), Query Frame = 1
Query:   16 RQIAKAMNFGIAYGSGASALGRSLTSEGSPTTREEASRLLAQYRRTYPGTASWAEARIAEIRDISGKTTSIDWPLSLRLAGGFREVSSIRRSFRSSQNRWPTAAEIAELHPDRHQRDLAELTESISWLLGYSAPVALEADGTPFTFSSRTLSGRRQQFNLHLDRLLMNAAIEAIQSESKDLIAVRTRFEDVHGIELSEGGAPFTEAELGRVFEDRPQRLRYIEMIARDLGDDTAHALLGRSARERVSVMVNAWRNAPIQGGVADIMLAGYADLDTRLRNYPGAVPVQTVHDSIVIECDRS 915
            R  AK +NFGI YG   + L RSL+  G  T+ EE   LL QY   YP  ASW  +R   I  ++     IDW L+LRL   +  V    R  R     WPTA ++       H     E+ E I+W L + APV L  +   F F S T SGRRQQF  H + +L  AA   ++S  +    VR    + HG++        +  E  ++ E+RP R   ++ +   +G +    LL +S   R+S M NA+RNAPIQGGVAD+ML  Y  L  RL  +  AV VQTVHDS+VIEC+RS
Sbjct:  468 RDKAKRINFGIVYGQRGAGLARSLSQAGVETSTEEGHILLKQYLSAYPQIASWVASRDRFIEALASSHDEIDWQLTLRLHEIWPLVRRAVRQHRDQHRNWPTAEDVVA-----HLGSPWEVDE-IAWTLSFEAPVVLTRNTEAFGFQSFTESGRRQQFTFHTEGVLEQAARTIVESSKEGPERVRRLVAEEHGVKFKNDDQLLSSTEATKLLENRPLRRTIVDQVKEHMGSEAVVLLLNKSLASRISQMANAYRNAPIQGGVADVMLEAYGLLYVRLSRFDSAVGVQTVHDSVVIECNRS 761          
BLAST of mRNA_M-pyrifera_M_contig82186.19220.1 vs. uniprot
Match: A0A0C1RFY7_9ACTN (DNA polymerase I n=4 Tax=Actinobacteria TaxID=201174 RepID=A0A0C1RFY7_9ACTN)

HSP 1 Score: 195 bits (495), Expect = 4.920e-53
Identity = 119/308 (38.64%), Postives = 155/308 (50.32%), Query Frame = 1
Query:    4 FKHLRQIAKAMNFGIAYGSGASALGRSLTSEGSPTTREEASRLLAQYRRTYPGTASWAEARIAEIRDISGKTTSIDWPLSLRLAGGFREVSSIRRSFRSSQNRWPTAAEIAELHPDRHQRDLAEL-----TESISWLLGYSAPVALEADGTPFTFSSRTLSGRRQQFNLHLDRLLMNAAIEAIQSESKDLIAVRTRFEDVHGIELSEGGAPFTEAELGRVFEDRPQRLRYIEMIARDLGDDTAHALLGRSARERVSVMVNAWRNAPIQGGVADIMLAGYADLDTRLRNYPGAVPVQTVHDSIVIECDR 912
            F   R  AK +NFGI YG     L RSL+  G  T  +E   LL QY   YP  ASW   R   +   +     +DW L+L L   +  V    R  R     WP A E+           LA L      E ++W L + A V ++ +G  F F S T SGRRQQF  H + +L  AA   I+S       VR +  D H +EL   G   + AE+ ++ EDR  R   IE + + +G +    LL RS   R+S M NA+RNAPIQGGVADIML  Y  L +RL  +  A  VQTVHDS+V+EC++
Sbjct:  464 FGEYRDKAKRINFGIVYGQRGGGLARSLSQAGVETNDDEGRVLLEQYLSAYPQIASWVNHRDDFVDQFTRSHGEVDWSLTLLLHRTWPLVRRAVREHRDEHRNWPGAEEV-----------LARLGSPWTIEEVAWSLSFEASVVIDTNGEVFGFDSLTESGRRQQFTFHTEGVLEQAAKTVIESNKDGPRLVREQISDRHNLELRNAGQSLSSAEITKILEDRKIRRAIIEQVEQTMGQEARTLLLNRSLESRISQMANAYRNAPIQGGVADIMLEAYGLLHSRLDQFDRAFGVQTVHDSVVVECNK 760          
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig82186.19220.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 18
Match NameE-valueIdentityDescription
A0A7Y2N7L7_9ACTN3.940e-12765.79DNA polymerase I n=1 Tax=Acidimicrobiales bacteriu... [more]
A0A7Y2DK37_9ACTN1.970e-11160.33DNA polymerase I n=1 Tax=Acidimicrobiales bacteriu... [more]
A0A351EQ77_9ACTN2.860e-8654.44DNA-directed DNA polymerase (Fragment) n=1 Tax=Aci... [more]
A0A7C1Y639_9ACTN1.260e-6241.64DNA polymerase I n=1 Tax=Acidimicrobiales bacteriu... [more]
A0A2E9XEE9_9ACTN1.610e-5941.53DNA polymerase I n=2 Tax=Actinobacteria TaxID=2011... [more]
A0A3B9QI02_9ACTN4.010e-5639.48DNA polymerase I n=3 Tax=Acidimicrobiaceae bacteri... [more]
A0A3B9J389_9ACTN1.230e-5438.03POLAc domain-containing protein (Fragment) n=2 Tax... [more]
A0A2D9RN08_9ACTN2.700e-5439.14DNA polymerase I n=5 Tax=Actinobacteria TaxID=2011... [more]
A0A7C7THJ9_9ACTN1.890e-5339.33DNA polymerase I n=5 Tax=Bacteria TaxID=2 RepID=A0... [more]
A0A0C1RFY7_9ACTN4.920e-5338.64DNA polymerase I n=4 Tax=Actinobacteria TaxID=2011... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig82186contigM-pyrifera_M_contig82186:2..916 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-19
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Properties
Property NameValue
Hectar predicted targeting categorymitochondrion
Exons1
Model size915
Cds size915
Stop0
Start0
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622816728.7968173-CDS-M-pyrifera_M_contig82186:1..9161622816728.7968173-CDS-M-pyrifera_M_contig82186:1..916Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig82186 2..916 -
1692278144.1744668-CDS-M-pyrifera_M_contig82186:1..9161692278144.1744668-CDS-M-pyrifera_M_contig82186:1..916Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig82186 2..916 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig82186.19220.1prot_M-pyrifera_M_contig82186.19220.1Macrocystis pyrifera P11B4 malepolypeptideM-pyrifera_M_contig82186 2..916 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_M-pyrifera_M_contig82186.19220.1

>prot_M-pyrifera_M_contig82186.19220.1 ID=prot_M-pyrifera_M_contig82186.19220.1|Name=mRNA_M-pyrifera_M_contig82186.19220.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=305bp
RFKHLRQIAKAMNFGIAYGSGASALGRSLTSEGSPTTREEASRLLAQYRR
TYPGTASWAEARIAEIRDISGKTTSIDWPLSLRLAGGFREVSSIRRSFRS
SQNRWPTAAEIAELHPDRHQRDLAELTESISWLLGYSAPVALEADGTPFT
FSSRTLSGRRQQFNLHLDRLLMNAAIEAIQSESKDLIAVRTRFEDVHGIE
LSEGGAPFTEAELGRVFEDRPQRLRYIEMIARDLGDDTAHALLGRSARER
VSVMVNAWRNAPIQGGVADIMLAGYADLDTRLRNYPGAVPVQTVHDSIVI
ECDRS
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mRNA from alignment at M-pyrifera_M_contig82186:2..916-

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_M-pyrifera_M_contig82186.19220.1 ID=mRNA_M-pyrifera_M_contig82186.19220.1|Name=mRNA_M-pyrifera_M_contig82186.19220.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=915bp|location=Sequence derived from alignment at M-pyrifera_M_contig82186:2..916- (Macrocystis pyrifera P11B4 male)
CGATTCAAGCATCTCCGCCAGATCGCCAAGGCCATGAACTTCGGGATCGC CTACGGATCCGGCGCCTCGGCGCTCGGACGCTCGCTCACCTCCGAGGGTT CGCCCACCACCAGAGAGGAGGCGTCGCGTCTTCTCGCCCAGTACCGCCGG ACCTATCCGGGCACCGCCTCCTGGGCCGAGGCCCGGATCGCCGAGATTCG CGACATCAGCGGAAAGACCACGAGCATCGACTGGCCGCTCAGCCTGCGGC TCGCCGGCGGCTTTCGCGAGGTGTCGTCCATCCGACGGTCGTTCCGCTCG TCGCAGAATCGATGGCCGACCGCCGCCGAGATCGCCGAGCTGCATCCCGA CCGACACCAGCGGGATCTGGCCGAGCTGACCGAGTCGATCTCGTGGCTGC TCGGCTATTCCGCTCCGGTCGCACTCGAAGCCGACGGCACGCCGTTCACC TTCTCGAGTCGCACCCTGTCGGGACGCCGTCAGCAGTTCAACCTCCACCT CGATCGCCTGCTCATGAACGCCGCCATCGAAGCGATCCAGAGCGAGTCGA AGGATCTGATCGCGGTGCGCACACGGTTCGAAGACGTGCACGGCATCGAG TTGAGCGAAGGCGGTGCGCCATTCACCGAGGCCGAGCTCGGCAGGGTCTT CGAGGACCGGCCACAGCGGCTGCGATACATCGAGATGATCGCCCGGGACC TCGGAGACGACACCGCTCACGCCCTGCTCGGACGCTCCGCCCGAGAACGA GTGTCGGTCATGGTGAACGCGTGGCGTAACGCTCCGATCCAAGGGGGTGT CGCCGACATCATGCTCGCCGGGTACGCCGACCTCGACACTCGTCTCCGAA ACTATCCTGGCGCCGTTCCGGTGCAGACGGTGCACGACTCGATCGTGATC GAGTGTGACCGATCA
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Coding sequence (CDS) from alignment at M-pyrifera_M_contig82186:2..916-

>mRNA_M-pyrifera_M_contig82186.19220.1 ID=mRNA_M-pyrifera_M_contig82186.19220.1|Name=mRNA_M-pyrifera_M_contig82186.19220.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=1830bp|location=Sequence derived from alignment at M-pyrifera_M_contig82186:2..916- (Macrocystis pyrifera P11B4 male)
CGATTCAAGCATCTCCGCCAGATCGCCAAGGCCATGAACTTCGGGATCGC
CTACGGATCCGGCGCCTCGGCGCTCGGACGCTCGCTCACCTCCGAGGGTT
CGCCCACCACCAGAGAGGAGGCGTCGCGTCTTCTCGCCCAGTACCGCCGG
ACCTATCCGGGCACCGCCTCCTGGGCCGAGGCCCGGATCGCCGAGATTCG
CGACATCAGCGGAAAGACCACGAGCATCGACTGGCCGCTCAGCCTGCGGC
TCGCCGGCGGCTTTCGCGAGGTGTCGTCCATCCGACGGTCGTTCCGCTCG
TCGCAGAATCGATGGCCGACCGCCGCCGAGATCGCCGAGCTGCATCCCGA
CCGACACCAGCGGGATCTGGCCGAGCTGACCGAGTCGATCTCGTGGCTGC
TCGGCTATTCCGCTCCGGTCGCACTCGAAGCCGACGGCACGCCGTTCACC
TTCTCGAGTCGCACCCTGTCGGGACGCCGTCAGCAGTTCAACCTCCACCT
CGATCGCCTGCTCATGAACGCCGCCATCGAAGCGATCCAGAGCGAGTCGA
AGGATCTGATCGCGGTGCGCACACGGTTCGAAGACGTGCACGGCATCGAG
TTGAGCGAAGGCGGTGCGCCATTCACCGAGGCCGAGCTCGGCAGGGTCTT
CGAGGACCGGCCACAGCGGCTGCGATACATCGAGATGATCGCCCGGGACC
TCGGAGACGACACCGCTCACGCCCTGCTCGGACGCTCCGCCCGAGAACGA
GTGTCGGTCATGGTGAACGCGTGGCGTAACGCTCCGATCCAAGGGGGTGT
CGCCGACATCATGCTCGCCGGGTACGCCGACCTCGACACTCGTCTCCGAA
ACTATCCTGGCGCCGTTCCGGTGCAGACGGTGCACGACTCGATCGTGATC
GAGTGTGACCGATCACGATTCAAGCATCTCCGCCAGATCGCCAAGGCCAT
GAACTTCGGGATCGCCTACGGATCCGGCGCCTCGGCGCTCGGACGCTCGC
TCACCTCCGAGGGTTCGCCCACCACCAGAGAGGAGGCGTCGCGTCTTCTC
GCCCAGTACCGCCGGACCTATCCGGGCACCGCCTCCTGGGCCGAGGCCCG
GATCGCCGAGATTCGCGACATCAGCGGAAAGACCACGAGCATCGACTGGC
CGCTCAGCCTGCGGCTCGCCGGCGGCTTTCGCGAGGTGTCGTCCATCCGA
CGGTCGTTCCGCTCGTCGCAGAATCGATGGCCGACCGCCGCCGAGATCGC
CGAGCTGCATCCCGACCGACACCAGCGGGATCTGGCCGAGCTGACCGAGT
CGATCTCGTGGCTGCTCGGCTATTCCGCTCCGGTCGCACTCGAAGCCGAC
GGCACGCCGTTCACCTTCTCGAGTCGCACCCTGTCGGGACGCCGTCAGCA
GTTCAACCTCCACCTCGATCGCCTGCTCATGAACGCCGCCATCGAAGCGA
TCCAGAGCGAGTCGAAGGATCTGATCGCGGTGCGCACACGGTTCGAAGAC
GTGCACGGCATCGAGTTGAGCGAAGGCGGTGCGCCATTCACCGAGGCCGA
GCTCGGCAGGGTCTTCGAGGACCGGCCACAGCGGCTGCGATACATCGAGA
TGATCGCCCGGGACCTCGGAGACGACACCGCTCACGCCCTGCTCGGACGC
TCCGCCCGAGAACGAGTGTCGGTCATGGTGAACGCGTGGCGTAACGCTCC
GATCCAAGGGGGTGTCGCCGACATCATGCTCGCCGGGTACGCCGACCTCG
ACACTCGTCTCCGAAACTATCCTGGCGCCGTTCCGGTGCAGACGGTGCAC
GACTCGATCGTGATCGAGTGTGACCGATCA
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