mRNA_M-pyrifera_M_contig82151.19216.1 (mRNA) Macrocystis pyrifera P11B4 male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_M-pyrifera_M_contig82151.19216.1
Unique NamemRNA_M-pyrifera_M_contig82151.19216.1
TypemRNA
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Homology
BLAST of mRNA_M-pyrifera_M_contig82151.19216.1 vs. uniprot
Match: A0A518A1F1_9PLAN (5-keto-4-deoxy-D-glucarate aldolase n=9 Tax=Gimesia TaxID=1649453 RepID=A0A518A1F1_9PLAN)

HSP 1 Score: 334 bits (856), Expect = 1.960e-114
Identity = 171/181 (94.48%), Postives = 174/181 (96.13%), Query Frame = 1
Query:    1 LPAPEEVSIKKALDLGAAGIIAPQVNSAEQAEQIVSWSRYSPEGTRGVGLGRAHGYGFAFDEYLAKANKETTVVVQAEHIDAVFAIEQIVAVPGVDAVLIGPYDLSASMKRIGEIDHPEVTGAIDHVTEVCQRYNMPLGIFGVTVDAVKPYIDKGFTLITVGVDTVMLGHAARKMLGQVKG 543
            LPAPEEV IKKALDLGAAGIIAPQVNS EQAEQIVSWSRYSPEGTRGVGLGRAHGYGF FD+YLAKAN ETTVVVQAEHIDAV AIEQIVAVPGVDAVLIGPYDLSASM+RIGEIDHPEVTGAIDHVTEVC + NMPLGIFGVTVDAVKPYIDKGFTLITVGVDTVMLGHAARKMLGQVKG
Sbjct:   70 LPAPEEVPIKKALDLGAAGIIAPQVNSVEQAEQIVSWSRYSPEGTRGVGLGRAHGYGFTFDDYLAKANAETTVVVQAEHIDAVNAIEQIVAVPGVDAVLIGPYDLSASMQRIGEIDHPEVTGAIDHVTEVCLKNNMPLGIFGVTVDAVKPYIDKGFTLITVGVDTVMLGHAARKMLGQVKG 250          
BLAST of mRNA_M-pyrifera_M_contig82151.19216.1 vs. uniprot
Match: A0A517VDC2_9PLAN (5-keto-4-deoxy-D-glucarate aldolase n=10 Tax=Planctomycetaceae TaxID=126 RepID=A0A517VDC2_9PLAN)

HSP 1 Score: 323 bits (829), Expect = 4.390e-110
Identity = 163/181 (90.06%), Postives = 173/181 (95.58%), Query Frame = 1
Query:    1 LPAPEEVSIKKALDLGAAGIIAPQVNSAEQAEQIVSWSRYSPEGTRGVGLGRAHGYGFAFDEYLAKANKETTVVVQAEHIDAVFAIEQIVAVPGVDAVLIGPYDLSASMKRIGEIDHPEVTGAIDHVTEVCQRYNMPLGIFGVTVDAVKPYIDKGFTLITVGVDTVMLGHAARKMLGQVKG 543
            L APEEVS+KKALD+GAAGIIAPQVNSAEQA  IVSWSRYSPEGTRGVGLGRAHGYGFAFD+YL+KAN+ETTVVVQAEHIDAV AIE I  VPGVDAVLIGPYDLSAS+KRIGEIDHPEVTGAIDHVTEVCQ+ N+PLGIFGVTVDAVKPYI+KGFTLITVGVDTVMLGHAARKMLGQV+G
Sbjct:   86 LQAPEEVSVKKALDIGAAGIIAPQVNSAEQAANIVSWSRYSPEGTRGVGLGRAHGYGFAFDDYLSKANEETTVVVQAEHIDAVNAIEDIAQVPGVDAVLIGPYDLSASLKRIGEIDHPEVTGAIDHVTEVCQKNNIPLGIFGVTVDAVKPYIEKGFTLITVGVDTVMLGHAARKMLGQVRG 266          
BLAST of mRNA_M-pyrifera_M_contig82151.19216.1 vs. uniprot
Match: A0A518I778_9PLAN (5-keto-4-deoxy-D-glucarate aldolase n=2 Tax=Gimesia TaxID=1649453 RepID=A0A518I778_9PLAN)

HSP 1 Score: 315 bits (806), Expect = 7.770e-107
Identity = 160/180 (88.89%), Postives = 169/180 (93.89%), Query Frame = 1
Query:    1 LPAPEEVSIKKALDLGAAGIIAPQVNSAEQAEQIVSWSRYSPEGTRGVGLGRAHGYGFAFDEYLAKANKETTVVVQAEHIDAVFAIEQIVAVPGVDAVLIGPYDLSASMKRIGEIDHPEVTGAIDHVTEVCQRYNMPLGIFGVTVDAVKPYIDKGFTLITVGVDTVMLGHAARKMLGQVK 540
            LPAPEEVSIKKALDLGAAGIIAPQVNSAEQA  IVSWSRYSPEGTRGVGLGRAHGYGF FD+YLAKAN+E TVVVQAEHIDAV +IE+IV V GVDAVLIGPYDLSAS+KRIGEIDHPEVTGAI HVTE CQ  N+PLGIFGVTVDAVKPYI+KGFTLITVGVDTVMLGHAAR+MLGQV+
Sbjct:   70 LPAPEEVSIKKALDLGAAGIIAPQVNSAEQAANIVSWSRYSPEGTRGVGLGRAHGYGFTFDDYLAKANEEITVVVQAEHIDAVNSIEEIVKVSGVDAVLIGPYDLSASLKRIGEIDHPEVTGAIQHVTEACQSNNIPLGIFGVTVDAVKPYIEKGFTLITVGVDTVMLGHAARRMLGQVR 249          
BLAST of mRNA_M-pyrifera_M_contig82151.19216.1 vs. uniprot
Match: A0A517W2I4_9PLAN (5-keto-4-deoxy-D-glucarate aldolase n=2 Tax=Gimesia aquarii TaxID=2527964 RepID=A0A517W2I4_9PLAN)

HSP 1 Score: 284 bits (727), Expect = 8.160e-95
Identity = 145/180 (80.56%), Postives = 162/180 (90.00%), Query Frame = 1
Query:    1 LPAPEEVSIKKALDLGAAGIIAPQVNSAEQAEQIVSWSRYSPEGTRGVGLGRAHGYGFAFDEYLAKANKETTVVVQAEHIDAVFAIEQIVAVPGVDAVLIGPYDLSASMKRIGEIDHPEVTGAIDHVTEVCQRYNMPLGIFGVTVDAVKPYIDKGFTLITVGVDTVMLGHAARKMLGQVK 540
            L AP+EV IKKALDLGAAGIIAPQVN+ E AE+IVS+++YSP+GTRGVGLGRAHGYGFAFD+YL+ AN   TVVVQAE IDAV  IEQIV V GVDAVLIGPYDLSAS+K+IGEIDHP+V  AI HVTEVCQ+ NMPLGIFGVTV+A+KPYI+KGFTLITVGVDTVMLG AARKMLGQ+K
Sbjct:   70 LAAPDEVLIKKALDLGAAGIIAPQVNTPELAEKIVSYAKYSPQGTRGVGLGRAHGYGFAFDDYLSSANDNITVVVQAEQIDAVNNIEQIVNVSGVDAVLIGPYDLSASLKKIGEIDHPDVVNAIQHVTEVCQKQNMPLGIFGVTVNAIKPYIEKGFTLITVGVDTVMLGQAARKMLGQLK 249          
BLAST of mRNA_M-pyrifera_M_contig82151.19216.1 vs. uniprot
Match: A0A517Z6A8_9PLAN (4-hydroxy-2-oxovalerate aldolase n=2 Tax=Maioricimonas rarisocia TaxID=2528026 RepID=A0A517Z6A8_9PLAN)

HSP 1 Score: 233 bits (593), Expect = 7.050e-74
Identity = 114/180 (63.33%), Postives = 144/180 (80.00%), Query Frame = 1
Query:    1 LPAPEEVSIKKALDLGAAGIIAPQVNSAEQAEQIVSWSRYSPEGTRGVGLGRAHGYGFAFDEYLAKANKETTVVVQAEHIDAVFAIEQIVAVPGVDAVLIGPYDLSASMKRIGEIDHPEVTGAIDHVTEVCQRYNMPLGIFGVTVDAVKPYIDKGFTLITVGVDTVMLGHAARKMLGQVK 540
            +PA +EV IK+ LDLGA GII PQVN+ E A ++V ++RY+P+G RGVGL RAHGYGF FDEY+ +AN++ +VVVQAEH DAV  IEQI AVPGVDAVL+GPYDLSAS  ++G+ID PEV  AID VTE CQ   +PLG FGVT +AV+PY++KG+TLI  GVD + LG  AR++LGQ++
Sbjct:  107 VPACDEVEIKRVLDLGAHGIIVPQVNTPEMAAEVVRFARYAPDGNRGVGLARAHGYGFRFDEYVKEANEQISVVVQAEHRDAVENIEQIAAVPGVDAVLVGPYDLSASYHKMGQIDDPEVVAAIDRVTECCQAAGLPLGHFGVTAEAVQPYVEKGYTLIVAGVDVLFLGGGARRILGQLQ 286          
BLAST of mRNA_M-pyrifera_M_contig82151.19216.1 vs. uniprot
Match: A0A2E6W9Y5_9BACT (2,4-dihydroxyhept-2-ene-1,7-dioic acid aldolase n=2 Tax=Planctomycetia TaxID=203683 RepID=A0A2E6W9Y5_9BACT)

HSP 1 Score: 229 bits (584), Expect = 4.790e-73
Identity = 109/179 (60.89%), Postives = 137/179 (76.54%), Query Frame = 1
Query:    1 LPAPEEVSIKKALDLGAAGIIAPQVNSAEQAEQIVSWSRYSPEGTRGVGLGRAHGYGFAFDEYLAKANKETTVVVQAEHIDAVFAIEQIVAVPGVDAVLIGPYDLSASMKRIGEIDHPEVTGAIDHVTEVCQRYNMPLGIFGVTVDAVKPYIDKGFTLITVGVDTVMLGHAARKMLGQV 537
            +P  +EV IKK LD GAAGIIAPQVNS EQA Q+VSW+RY+PEG RGVGLGRAHGYG  F EY+ +AN E   V+Q EHIDAV  +E+I+ V GVD +L+GPYDLSASM ++G++D PEV  AIDHVT+ CQ   MPLG FGV+ +A+KPY+++G+TLI  G DT+ L   AR  L ++
Sbjct:   69 VPVADEVWIKKFLDCGAAGIIAPQVNSPEQAAQVVSWTRYAPEGIRGVGLGRAHGYGLTFGEYVERANDEIACVIQVEHIDAVNCVEEIIKVQGVDCILLGPYDLSASMGKMGQVDDPEVIAAIDHVTKTCQAVGMPLGYFGVSPEAIKPYVEQGYTLIVAGTDTIFLASGARHFLKKL 247          
BLAST of mRNA_M-pyrifera_M_contig82151.19216.1 vs. uniprot
Match: A0A2N5K695_9CHLR (2,4-dihydroxyhept-2-ene-1,7-dioic acid aldolase n=1 Tax=Chloroflexi bacterium TaxID=2026724 RepID=A0A2N5K695_9CHLR)

HSP 1 Score: 228 bits (582), Expect = 9.040e-73
Identity = 112/175 (64.00%), Postives = 139/175 (79.43%), Query Frame = 1
Query:   16 EVSIKKALDLGAAGIIAPQVNSAEQAEQIVSWSRYSPEGTRGVGLGRAHGYGFAFDEYLAKANKETTVVVQAEHIDAVFAIEQIVAVPGVDAVLIGPYDLSASMKRIGEIDHPEVTGAIDHVTEVCQRYNMPLGIFGVTVDAVKPYIDKGFTLITVGVDTVMLGHAARKMLGQVK 540
            EV IK+ALD+GAAGII PQVNSA QAEQ+V W++Y+P G+RGVG+ RAHGYG++  +Y+A+AN +T V+VQAEHIDAV  IE IV VPGVDAVL+GPYDLS S+  +G++DHP V  AI HVTEVCQ   M LG FGV+ DAVKPYI +G+TLI  GVDT++L  A   +L Q+K
Sbjct:   75 EVPIKQALDVGAAGIIVPQVNSAAQAEQVVHWAKYAPVGSRGVGVARAHGYGWSLGDYIARANHDTAVIVQAEHIDAVQEIEAIVRVPGVDAVLVGPYDLSGSLGLLGQVDHPRVREAIAHVTEVCQAAGMRLGYFGVSADAVKPYIARGYTLIVAGVDTLLLAQAMSGLLAQLK 249          
BLAST of mRNA_M-pyrifera_M_contig82151.19216.1 vs. uniprot
Match: A0A2E6HGT3_9BACT (2,4-dihydroxyhept-2-ene-1,7-dioic acid aldolase n=1 Tax=Verrucomicrobiales bacterium TaxID=2026801 RepID=A0A2E6HGT3_9BACT)

HSP 1 Score: 225 bits (573), Expect = 2.380e-71
Identity = 109/180 (60.56%), Postives = 139/180 (77.22%), Query Frame = 1
Query:    1 LPAPEEVSIKKALDLGAAGIIAPQVNSAEQAEQIVSWSRYSPEGTRGVGLGRAHGYGFAFDEYLAKANKETTVVVQAEHIDAVFAIEQIVAVPGVDAVLIGPYDLSASMKRIGEIDHPEVTGAIDHVTEVCQRYNMPLGIFGVTVDAVKPYIDKGFTLITVGVDTVMLGHAARKMLGQVK 540
            LP+ EEV IKK LDLGAAGIIAPQVN+ EQA+ +V +SRYSP+GTRGVGLGRAHGYG  F++Y+  AN    V+VQAEHI AV  IE IV + G+D +++GPYDLSAS+ ++G+I+ PEVT AID V + CQ  N+ +G FGV  +AVKPYI KG+ LI  GVDT+ LG+AAR +  ++K
Sbjct:   70 LPSAEEVPIKKVLDLGAAGIIAPQVNTVEQAKDVVRFSRYSPDGTRGVGLGRAHGYGMRFEDYMETANDSVAVIVQAEHIQAVECIESIVKIDGIDGIMLGPYDLSASLGKMGKINDPEVTNAIDRVFQACQSANLSIGYFGVNTEAVKPYIKKGYNLILAGVDTLHLGNAARDLFNELK 249          
BLAST of mRNA_M-pyrifera_M_contig82151.19216.1 vs. uniprot
Match: A0A7C2JSG7_9GAMM (2,4-dihydroxyhept-2-ene-1,7-dioic acid aldolase n=1 Tax=Gammaproteobacteria bacterium TaxID=1913989 RepID=A0A7C2JSG7_9GAMM)

HSP 1 Score: 224 bits (572), Expect = 3.270e-71
Identity = 114/181 (62.98%), Postives = 136/181 (75.14%), Query Frame = 1
Query:    1 LPAPEEVSIKKALDLGAAGIIAPQVNSAEQAEQIVSWSRYSPEGTRGVGLGRAHGYGFAFDEYLAKANKETTVVVQAEHIDAVFAIEQIVAVPGVDAVLIGPYDLSASMKRIGEIDHPEVTGAIDHVTEVCQRYNMPLGIFGVTVDAVKPYIDKGFTLITVGVDTVMLGHAARKMLGQVKG 543
            +P   E+ IK+ALDLGA GII PQVN+AEQA  +V W+RY+PEG RGVGL RAHGYG  F EYL  AN+E  VVVQAEH  AV  IE IV VPGVDAVL+GPYDLSAS+ ++GEIDHP V  AID VTEVC    MPLG FGVT  AV+PY  +G+TLI  GVDT+ L + A+ +L +++G
Sbjct:   70 VPEAAELPIKRALDLGAHGIIVPQVNTAEQAADVVRWARYAPEGARGVGLARAHGYGLTFREYLRAANREIAVVVQAEHALAVENIEAIVGVPGVDAVLLGPYDLSASLGKMGEIDHPTVVAAIDRVTEVCVAAGMPLGYFGVTAAAVQPYAARGYTLIVAGVDTLYLANGAKALLEELRG 250          
BLAST of mRNA_M-pyrifera_M_contig82151.19216.1 vs. uniprot
Match: A0A2E5K7K4_9PLAN (2,4-dihydroxyhept-2-ene-1,7-dioic acid aldolase n=2 Tax=Planctomycetaceae bacterium TaxID=2026779 RepID=A0A2E5K7K4_9PLAN)

HSP 1 Score: 223 bits (569), Expect = 9.030e-71
Identity = 106/180 (58.89%), Postives = 136/180 (75.56%), Query Frame = 1
Query:    1 LPAPEEVSIKKALDLGAAGIIAPQVNSAEQAEQIVSWSRYSPEGTRGVGLGRAHGYGFAFDEYLAKANKETTVVVQAEHIDAVFAIEQIVAVPGVDAVLIGPYDLSASMKRIGEIDHPEVTGAIDHVTEVCQRYNMPLGIFGVTVDAVKPYIDKGFTLITVGVDTVMLGHAARKMLGQVK 540
            +P  +EV IKK LD GA+GIIAPQVNS EQA Q+VSW+RY+PEG+RGVGLGRAHGYG +F EY+ +AN E   V+Q EHIDAV  IE+ V VPG+D +L+GPYDLSASM ++G++   +V  AI+HVT+VCQ   MPLG FGV+   +KPY+D+G+TL+    DT+ L   AR  L Q+K
Sbjct:   69 VPVADEVWIKKFLDCGASGIIAPQVNSPEQAAQVVSWTRYAPEGSRGVGLGRAHGYGLSFGEYVERANDEIACVIQVEHIDAVNCIEETVKVPGIDCILLGPYDLSASMGKMGQVQDADVVAAIEHVTKVCQAAGMPLGYFGVSAADIKPYVDQGYTLVVAATDTIFLASGARHFLRQLK 248          
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig82151.19216.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A518A1F1_9PLAN1.960e-11494.485-keto-4-deoxy-D-glucarate aldolase n=9 Tax=Gimesi... [more]
A0A517VDC2_9PLAN4.390e-11090.065-keto-4-deoxy-D-glucarate aldolase n=10 Tax=Planc... [more]
A0A518I778_9PLAN7.770e-10788.895-keto-4-deoxy-D-glucarate aldolase n=2 Tax=Gimesi... [more]
A0A517W2I4_9PLAN8.160e-9580.565-keto-4-deoxy-D-glucarate aldolase n=2 Tax=Gimesi... [more]
A0A517Z6A8_9PLAN7.050e-7463.334-hydroxy-2-oxovalerate aldolase n=2 Tax=Maioricim... [more]
A0A2E6W9Y5_9BACT4.790e-7360.892,4-dihydroxyhept-2-ene-1,7-dioic acid aldolase n=... [more]
A0A2N5K695_9CHLR9.040e-7364.002,4-dihydroxyhept-2-ene-1,7-dioic acid aldolase n=... [more]
A0A2E6HGT3_9BACT2.380e-7160.562,4-dihydroxyhept-2-ene-1,7-dioic acid aldolase n=... [more]
A0A7C2JSG7_9GAMM3.270e-7162.982,4-dihydroxyhept-2-ene-1,7-dioic acid aldolase n=... [more]
A0A2E5K7K4_9PLAN9.030e-7158.892,4-dihydroxyhept-2-ene-1,7-dioic acid aldolase n=... [more]

Pages

back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig82151contigM-pyrifera_M_contig82151:3..548 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-19
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Properties
Property NameValue
Taxonomic scopeBacteria
Seed ortholog score318.9
Seed ortholog evalue1.5e-84
Seed eggNOG ortholog344747.PM8797T_05050
Preferred nameMA20_09190
KEGG rclassRC00152,RC00307,RC00435,RC00572,RC00574,RC00910,RC03057
KEGG koko:K00979,ko:K01630,ko:K02510
KEGG ReactionR01645,R01647,R02754,R03277,R03351,R11396
KEGG Pathwayko00053,ko00350,ko00540,ko01100,ko01120,map00053,map00350,map00540,map01100,map01120
KEGG ModuleM00063
Hectar predicted targeting categoryother localisation
EggNOG free text desc.Belongs to the HpcH HpaI aldolase family
EggNOG OGs2IX9H@203682,COG3836@1,COG3836@2
EC2.7.7.38,4.1.2.20,4.1.2.52
COG Functional cat.G
Best tax levelPlanctomycetes
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko00002,ko01000,ko01005
Exons1
Model size546
Cds size546
Stop1
Start0
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622816728.6513827-CDS-M-pyrifera_M_contig82151:2..5481622816728.6513827-CDS-M-pyrifera_M_contig82151:2..548Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig82151 3..548 +
1692278144.1216598-CDS-M-pyrifera_M_contig82151:2..5481692278144.1216598-CDS-M-pyrifera_M_contig82151:2..548Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig82151 3..548 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig82151.19216.1prot_M-pyrifera_M_contig82151.19216.1Macrocystis pyrifera P11B4 malepolypeptideM-pyrifera_M_contig82151 3..548 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_M-pyrifera_M_contig82151.19216.1

>prot_M-pyrifera_M_contig82151.19216.1 ID=prot_M-pyrifera_M_contig82151.19216.1|Name=mRNA_M-pyrifera_M_contig82151.19216.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=182bp
LPAPEEVSIKKALDLGAAGIIAPQVNSAEQAEQIVSWSRYSPEGTRGVGL
GRAHGYGFAFDEYLAKANKETTVVVQAEHIDAVFAIEQIVAVPGVDAVLI
GPYDLSASMKRIGEIDHPEVTGAIDHVTEVCQRYNMPLGIFGVTVDAVKP
YIDKGFTLITVGVDTVMLGHAARKMLGQVKG*
back to top

mRNA from alignment at M-pyrifera_M_contig82151:3..548+

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_M-pyrifera_M_contig82151.19216.1 ID=mRNA_M-pyrifera_M_contig82151.19216.1|Name=mRNA_M-pyrifera_M_contig82151.19216.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=546bp|location=Sequence derived from alignment at M-pyrifera_M_contig82151:3..548+ (Macrocystis pyrifera P11B4 male)
CTGCCCGCCCCCGAAGAAGTCTCCATCAAGAAAGCCCTCGACCTGGGTGC CGCCGGCATCATCGCTCCGCAGGTCAATTCCGCGGAACAGGCCGAACAGA TCGTCTCCTGGTCTCGTTACTCTCCTGAAGGAACCCGGGGGGTCGGCCTG GGTCGCGCCCACGGCTACGGCTTTGCCTTCGATGAATACCTGGCCAAAGC GAATAAGGAAACCACCGTCGTCGTTCAGGCCGAACACATCGATGCGGTTT TCGCGATCGAACAGATCGTCGCCGTCCCCGGCGTCGACGCAGTTTTGATC GGCCCCTACGATCTCTCCGCCAGCATGAAACGCATCGGCGAGATCGATCA TCCCGAAGTGACTGGCGCCATCGACCATGTGACCGAAGTCTGTCAGAGAT ACAACATGCCCCTGGGCATCTTCGGCGTCACCGTGGACGCAGTCAAACCC TACATCGACAAAGGCTTCACCCTGATCACCGTCGGCGTCGACACCGTCAT GCTGGGCCACGCCGCCCGCAAAATGCTGGGACAGGTTAAGGGGTAG
back to top

Coding sequence (CDS) from alignment at M-pyrifera_M_contig82151:3..548+

>mRNA_M-pyrifera_M_contig82151.19216.1 ID=mRNA_M-pyrifera_M_contig82151.19216.1|Name=mRNA_M-pyrifera_M_contig82151.19216.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=1092bp|location=Sequence derived from alignment at M-pyrifera_M_contig82151:3..548+ (Macrocystis pyrifera P11B4 male)
CTGCCCGCCCCCGAAGAAGTCTCCATCAAGAAAGCCCTCGACCTGGGTGC
CGCCGGCATCATCGCTCCGCAGGTCAATTCCGCGGAACAGGCCGAACAGA
TCGTCTCCTGGTCTCGTTACTCTCCTGAAGGAACCCGGGGGGTCGGCCTG
GGTCGCGCCCACGGCTACGGCTTTGCCTTCGATGAATACCTGGCCAAAGC
GAATAAGGAAACCACCGTCGTCGTTCAGGCCGAACACATCGATGCGGTTT
TCGCGATCGAACAGATCGTCGCCGTCCCCGGCGTCGACGCAGTTTTGATC
GGCCCCTACGATCTCTCCGCCAGCATGAAACGCATCGGCGAGATCGATCA
TCCCGAAGTGACTGGCGCCATCGACCATGTGACCGAAGTCTGTCAGAGAT
ACAACATGCCCCTGGGCATCTTCGGCGTCACCGTGGACGCAGTCAAACCC
TACATCGACAAAGGCTTCACCCTGATCACCGTCGGCGTCGACACCGTCAT
GCTGGGCCACGCCGCCCGCAAAATGCTGGGACAGGTTAAGGGGTAGCTGC
CCGCCCCCGAAGAAGTCTCCATCAAGAAAGCCCTCGACCTGGGTGCCGCC
GGCATCATCGCTCCGCAGGTCAATTCCGCGGAACAGGCCGAACAGATCGT
CTCCTGGTCTCGTTACTCTCCTGAAGGAACCCGGGGGGTCGGCCTGGGTC
GCGCCCACGGCTACGGCTTTGCCTTCGATGAATACCTGGCCAAAGCGAAT
AAGGAAACCACCGTCGTCGTTCAGGCCGAACACATCGATGCGGTTTTCGC
GATCGAACAGATCGTCGCCGTCCCCGGCGTCGACGCAGTTTTGATCGGCC
CCTACGATCTCTCCGCCAGCATGAAACGCATCGGCGAGATCGATCATCCC
GAAGTGACTGGCGCCATCGACCATGTGACCGAAGTCTGTCAGAGATACAA
CATGCCCCTGGGCATCTTCGGCGTCACCGTGGACGCAGTCAAACCCTACA
TCGACAAAGGCTTCACCCTGATCACCGTCGGCGTCGACACCGTCATGCTG
GGCCACGCCGCCCGCAAAATGCTGGGACAGGTTAAGGGGTAG
back to top