mRNA_M-pyrifera_M_contig82144.19212.1 (mRNA) Macrocystis pyrifera P11B4 male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_M-pyrifera_M_contig82144.19212.1
Unique NamemRNA_M-pyrifera_M_contig82144.19212.1
TypemRNA
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Homology
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BLAST of mRNA_M-pyrifera_M_contig82144.19212.1 vs. uniprot
Match: A0A1Z5L7D2_ORNMO (Conserved oligomeric Golgi complex subunit 6 (Fragment) n=1 Tax=Ornithodoros moubata TaxID=6938 RepID=A0A1Z5L7D2_ORNMO)

HSP 1 Score: 181 bits (458), Expect = 7.250e-52
Identity = 96/254 (37.80%), Postives = 152/254 (59.84%), Query Frame = 1 
Query:   13 FERYTPG-MRDAHRRVTENQWDVEAWSKLAVDAHTAVPLEAARSIYERLLALFPTAGRHWKAYIDLELNHRNYAFAEKLLERCLLKYPHMDIWTSYLRYVKQRYEEXXXXXXXXXXXXPNNSGRPPLPTGEALEKLKQAFDFALEHIGLDMCSTPIWIEYVALLKAQGSGTTQREESNNMMAVRKLYERAFSIPMHNLEQVWREYDQYENGLSKVLAKHLLSKLSPSYMTSRTVYREMKTISDGLSKNMLAVPP 771
             E Y P  +++A +R+ +N +D+EAWS L  DA     +E AR ++E+++  FP AGR+WK YI+ E+  RNY   EKL +RCL+K  ++D+W  YL YVK+                     +  LPT    EK+ QA+DFAL+ +G+D+ S PIW +Y+  LK+         E+  + AVRK+Y+R    PM N+EQ+W++Y  YE G++ ++A+ +++  S  YM +R V +E + ++ GL+KN  +VPP
Sbjct:    4 MEGYIPDRVKNAEKRLEQNAYDLEAWSVLLRDAQNK-KIEDARLLFEKIVTQFPNAGRYWKIYIEHEMKSRNYERVEKLFQRCLMKVLNIDLWKCYLSYVKET--------------------KGALPTFR--EKMAQAYDFALDKMGMDILSYPIWNDYINFLKSV-EAVGSYAENQRITAVRKIYQRGIVNPMMNIEQLWKDYILYEQGINSLIAEKMITDRSREYMNARRVAKEYEAVTRGLNKNAPSVPP 233
[Close]
BLAST of mRNA_M-pyrifera_M_contig82144.19212.1 vs. uniprot
Match: A0A1S3KWZ3_SALSA (cleavage stimulation factor subunit 3-like n=6 Tax=Euteleostomi TaxID=117571 RepID=A0A1S3KWZ3_SALSA)

HSP 1 Score: 177 bits (450), Expect = 2.930e-51
Identity = 93/246 (37.80%), Postives = 148/246 (60.16%), Query Frame = 1 
Query:   34 MRDAHRRVTENQWDVEAWSKLAVDAHTAVPLEAARSIYERLLALFPTAGRHWKAYIDLELNHRNYAFAEKLLERCLLKYPHMDIWTSYLRYVKQRYEEXXXXXXXXXXXXPNNSGRPPLPTGEALEKLKQAFDFALEHIGLDMCSTPIWIEYVALLKAQGSGTTQREESNNMMAVRKLYERAFSIPMHNLEQVWREYDQYENGLSKVLAKHLLSKLSPSYMTSRTVYREMKTISDGLSKNMLAVPP 771
            ++ A +++ EN +D++AWS L  +A    P++ AR  YERL+A FP++GR WK +I+ E+  +NY   EKL +RCL+K  H+D+W  YL YV++                    G+  LP+ +  EK+ QA+DFAL+ IG+++ S  IW++Y+  LK          E+  + AVR++Y+R    PM N+EQ+WR+Y +YE G++  LAK ++   S  YM +R V +E +T+  GL +N  +VPP
Sbjct:   18 VKKAEKKLEENPYDLDAWSILIREAQNQ-PIDKARKTYERLVAQFPSSGRFWKLFIEAEIKAKNYDKVEKLFQRCLMKVLHIDLWKCYLSYVRE------------------TKGK--LPSYK--EKMAQAYDFALDKIGMEIMSYQIWVDYINFLKGV-EAVGSYAENQRITAVRRVYQRGCVNPMINIEQLWRDYSKYEEGINVHLAKKMIEDRSRDYMNARRVAKEYETVMKGLDRNAPSVPP 239
[Close]
BLAST of mRNA_M-pyrifera_M_contig82144.19212.1 vs. uniprot
Match: A0A6B2KZI8_9EUKA (Suf domain-containing protein n=2 Tax=Arcella intermedia TaxID=1963864 RepID=A0A6B2KZI8_9EUKA)

HSP 1 Score: 186 bits (473), Expect = 3.030e-51
Identity = 92/237 (38.82%), Postives = 145/237 (61.18%), Query Frame = 1 
Query:   61 ENQWDVEAWSKLAVDAHTAVPLEAARSIYERLLALFPTAGRHWKAYIDLELNHRNYAFAEKLLERCLLKYPHMDIWTSYLRYVKQRYEEXXXXXXXXXXXXPNNSGRPPLPTGEALEKLKQAFDFALEHIGLDMCSTPIWIEYVALLKAQGSGTTQREESNNMMAVRKLYERAFSIPMHNLEQVWREYDQYENGLSKVLAKHLLSKLSPSYMTSRTVYREMKTISDGLSKNMLAVPP 771
            +++++ +AW+ +  +A    P+  AR IYE  L +FPTAGR+WK YI+ EL   N+   EKL  RCL + P++D+W  Y++Y+     +                         + +++   F+FA+ ++G+D+ +TPIW +Y+  +K Q +G+ Q EES  M ++RKLY+RA   PMHNLE +W EY+ +ENGL+K+LAK LL++  P YM +RT YRE K   +G+ +N+LA PP
Sbjct:    2 KDKYETDAWATMISEAQ-GKPIAVARIIYEEFLDVFPTAGRYWKIYIEQELAANNFDQVEKLFTRCLKQCPNVDLWKCYIKYILDYKAKQFT----------------------SSQEVINVFEFAIGNVGMDIAATPIWTDYIHFVKTQKTGS-QFEESQKMESLRKLYQRAVVNPMHNLENIWNEYNTFENGLNKILAKALLTENGPKYMQARTTYRERKNYLEGIQRNLLARPP 214
[Close]
BLAST of mRNA_M-pyrifera_M_contig82144.19212.1 vs. uniprot
Match: A0A821UDK0_9NEOP (Hypothetical protein n=2 Tax=Ditrysia TaxID=37567 RepID=A0A821UDK0_9NEOP)

HSP 1 Score: 176 bits (446), Expect = 9.560e-51
Identity = 93/243 (38.27%), Postives = 147/243 (60.49%), Query Frame = 1 
Query:   43 AHRRVTENQWDVEAWSKLAVDAHTAVPLEAARSIYERLLALFPTAGRHWKAYIDLELNHRNYAFAEKLLERCLLKYPHMDIWTSYLRYVKQRYEEXXXXXXXXXXXXPNNSGRPPLPTGEALEKLKQAFDFALEHIGLDMCSTPIWIEYVALLKAQGSGTTQREESNNMMAVRKLYERAFSIPMHNLEQVWREYDQYENGLSKVLAKHLLSKLSPSYMTSRTVYREMKTISDGLSKNMLAVPP 771
            A R V  N +DV++WS L  +A T  P+   R++YE+L+A FPT GR WK YI+ E+  RN+   EKL +RCL+K  ++++W  YL YVK+                     +  LPT +  EK+ QA+DFAL+ IGLD+ + PIW +YV  LK+  +      E+  + AVRK+Y+RA   P+  +E +W++Y  +E G++ ++A+ +  + S  YM +R V +E++T++ GL++NM A PP
Sbjct:   18 AQRAVEANTYDVDSWSLLIREAQTR-PINEVRTVYEKLIAAFPTTGRFWKIYIEQEMKARNFEKVEKLFQRCLMKILNIELWRLYLNYVKET--------------------KCMLPTYK--EKMAQAYDFALDKIGLDIHAYPIWNDYVTFLKSVDA-VGSYAENQKISAVRKVYQRAVITPIIGIETLWKDYIAFEQGINTIIAERMAMERSREYMNARRVSKELETVTRGLNRNMPATPP 236
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BLAST of mRNA_M-pyrifera_M_contig82144.19212.1 vs. uniprot
Match: UPI0015AE07C8 (cleavage stimulation factor subunit 3-like n=1 Tax=Stegodyphus dumicola TaxID=202533 RepID=UPI0015AE07C8)

HSP 1 Score: 174 bits (440), Expect = 3.500e-50
Identity = 94/249 (37.75%), Postives = 146/249 (58.63%), Query Frame = 1 
Query:   34 MRDAHRRVTENQWDVEAWSKLAVDAHTAVPLEAARSIYERLLALFPTAGRHWKAYIDLELNHRNYAFAEKLLERCLLKYPHMDIWTSYLRYVKQRYEEXXXXXXXXXXXXPNNSGRPPLPTGEALEKLKQAFDFALEHIGLDMCSTPIWIEYVALLK---AQGSGTTQREESNNMMAVRKLYERAFSIPMHNLEQVWREYDQYENGLSKVLAKHLLSKLSPSYMTSRTVYREMKTISDGLSKNMLAVPP 771
            ++ A +R+ +N +DVEAWS +  DA     ++ AR  YE+L+  FP+AGR+WK YI+ E+  RNY   EKL  RCL+K  ++D+W +YL YVK+                     +  LP+    EK+ QA+DFALE +G+D+ S PIW +Y+  LK   A GS      E+  + AVRK+Y+R    PM N+EQ+W++Y  YE  ++ ++A  ++   S  YM +R V +E + ++ GL++N  + PP
Sbjct:   17 IKKAEKRLEQNPYDVEAWSIIVRDAQNK-KIDEARPYYEKLVVQFPSAGRYWKLYIEHEMKSRNYERVEKLFTRCLVKVLNIDLWRTYLSYVKET--------------------KGSLPSYR--EKMAQAYDFALEKMGMDIMSYPIWNDYITFLKNVEAVGSYA----ENQRITAVRKVYQRGIVNPMTNIEQLWKDYVSYEQSINPIIADKMIQDRSRDYMNARRVAKEYEAVTRGLNRNAPSTPP 238
[Close]
BLAST of mRNA_M-pyrifera_M_contig82144.19212.1 vs. uniprot
Match: A0A8C5G210_9TELE (Cleavage stimulation factor subunit 3 n=2 Tax=Clupeocephala TaxID=186625 RepID=A0A8C5G210_9TELE)

HSP 1 Score: 179 bits (455), Expect = 5.130e-50
Identity = 94/246 (38.21%), Postives = 148/246 (60.16%), Query Frame = 1 
Query:   34 MRDAHRRVTENQWDVEAWSKLAVDAHTAVPLEAARSIYERLLALFPTAGRHWKAYIDLELNHRNYAFAEKLLERCLLKYPHMDIWTSYLRYVKQRYEEXXXXXXXXXXXXPNNSGRPPLPTGEALEKLKQAFDFALEHIGLDMCSTPIWIEYVALLKAQGSGTTQREESNNMMAVRKLYERAFSIPMHNLEQVWREYDQYENGLSKVLAKHLLSKLSPSYMTSRTVYREMKTISDGLSKNMLAVPP 771
            ++ A +++ EN +D++AWS L  +A    P++ AR  YERL+A FP++GR WK +I+ E+  +NY   EKL +RCL+K  H+D+W  YL YV++                    G+  LPT +  EK+ QA+DFAL+ IG+++ S  IW++Y+  LK          E+  + AVR++Y+R    PM N+EQ+WR+Y +YE G++  LAK ++   S  YM +R V +E +T+  GL +N  +VPP
Sbjct:   16 VKKAEKKLEENSYDLDAWSILIREAQNQ-PIDKARKTYERLVAQFPSSGRFWKLFIEAEIKAKNYDKVEKLFQRCLMKVLHIDLWKCYLSYVRE------------------TKGK--LPTYK--EKMAQAYDFALDKIGMEIMSYQIWVDYINFLKGV-EAVGSYAENQRITAVRRVYQRGCVNPMINIEQLWRDYSKYEEGINVHLAKKMIEDRSRDYMNARRVAKEYETVMKGLDRNAPSVPP 237
[Close]
BLAST of mRNA_M-pyrifera_M_contig82144.19212.1 vs. uniprot
Match: A0A1E1XBA3_9ACAR (Putative mrna cleavage and polyadenylation factor i complex subunit rna14 (Fragment) n=1 Tax=Amblyomma aureolatum TaxID=187763 RepID=A0A1E1XBA3_9ACAR)

HSP 1 Score: 184 bits (466), Expect = 6.340e-50
Identity = 96/246 (39.02%), Postives = 149/246 (60.57%), Query Frame = 1 
Query:   34 MRDAHRRVTENQWDVEAWSKLAVDAHTAVPLEAARSIYERLLALFPTAGRHWKAYIDLELNHRNYAFAEKLLERCLLKYPHMDIWTSYLRYVKQRYEEXXXXXXXXXXXXPNNSGRPPLPTGEALEKLKQAFDFALEHIGLDMCSTPIWIEYVALLKAQGSGTTQREESNNMMAVRKLYERAFSIPMHNLEQVWREYDQYENGLSKVLAKHLLSKLSPSYMTSRTVYREMKTISDGLSKNMLAVPP 771
            +++A +R+ +N +DVEAWS L  DA     +E AR +YE+++  FP AGR+WK YI+ E+  RN+   EKL +RCL+K  ++D+W  YL YVK+                     +  LPT    EK+ QA+DFAL+ +G+D+ S PIW +Y+  LK+         E+  + AVRK+Y+R    PM N+EQ+W+EY  YE G++ ++A+ ++S  S  YM +R V +E + ++ GL+KN  +VPP
Sbjct:    4 VKNAEKRLEQNVYDVEAWSILLRDAQNK-KIEEARPLYEKIVTQFPNAGRYWKIYIEHEMKSRNFERVEKLFQRCLMKVLNIDLWRCYLTYVKET--------------------KGSLPTFR--EKMAQAYDFALDKMGMDILSYPIWTDYINFLKSV-EAVGSYAENQRITAVRKVYQRGIVNPMMNIEQLWKEYINYEQGINMLIAEKMISDRSREYMNARRVAKEYEAVTRGLNKNAPSVPP 225
[Close]
BLAST of mRNA_M-pyrifera_M_contig82144.19212.1 vs. uniprot
Match: A0A0S7GSM1_9TELE (CSTF3 (Fragment) n=1 Tax=Poeciliopsis prolifica TaxID=188132 RepID=A0A0S7GSM1_9TELE)

HSP 1 Score: 174 bits (442), Expect = 7.200e-50
Identity = 91/246 (36.99%), Postives = 148/246 (60.16%), Query Frame = 1 
Query:   34 MRDAHRRVTENQWDVEAWSKLAVDAHTAVPLEAARSIYERLLALFPTAGRHWKAYIDLELNHRNYAFAEKLLERCLLKYPHMDIWTSYLRYVKQRYEEXXXXXXXXXXXXPNNSGRPPLPTGEALEKLKQAFDFALEHIGLDMCSTPIWIEYVALLKAQGSGTTQREESNNMMAVRKLYERAFSIPMHNLEQVWREYDQYENGLSKVLAKHLLSKLSPSYMTSRTVYREMKTISDGLSKNMLAVPP 771
            ++ A +++ EN +D++AWS L  +A    P++ AR  +ERL++ FP++GR WK +I+ E+  +NY   EKL +RCL+K  H+D+W  YL YV++                    G+  LP+ +  EK+ QA+DFAL+ IG+++ S  IW++Y+  LK          E+  + AVR++Y+R    PM N+EQ+WR+Y +YE G++  LAK ++   S  YM +R V +E +T+  GL +N  +VPP
Sbjct:   10 VKKAEKKLEENPYDLDAWSILIREAQNQ-PIDKARKTHERLVSQFPSSGRFWKLFIEAEIKAKNYDKVEKLFQRCLMKVLHIDLWKCYLAYVRE------------------TKGK--LPSYK--EKMAQAYDFALDKIGMEIMSYQIWVDYINFLKGV-EAVGSYAENQRITAVRRVYQRGCVNPMINIEQLWRDYSKYEEGINVHLAKKMIEDRSRDYMNARRVAKEYETVMKGLDRNAPSVPP 231
[Close]
BLAST of mRNA_M-pyrifera_M_contig82144.19212.1 vs. uniprot
Match: A0A803YAX5_MELGA (Cleavage stimulation factor subunit 3 n=2 Tax=Euteleostomi TaxID=117571 RepID=A0A803YAX5_MELGA)

HSP 1 Score: 179 bits (453), Expect = 8.950e-50
Identity = 92/246 (37.40%), Postives = 147/246 (59.76%), Query Frame = 1 
Query:   34 MRDAHRRVTENQWDVEAWSKLAVDAHTAVPLEAARSIYERLLALFPTAGRHWKAYIDLELNHRNYAFAEKLLERCLLKYPHMDIWTSYLRYVKQRYEEXXXXXXXXXXXXPNNSGRPPLPTGEALEKLKQAFDFALEHIGLDMCSTPIWIEYVALLKAQGSGTTQREESNNMMAVRKLYERAFSIPMHNLEQVWREYDQYENGLSKVLAKHLLSKLSPSYMTSRTVYREMKTISDGLSKNMLAVPP 771
            ++ A +++ EN +D++AWS L  +A    P++ AR  YERL+A FP++GR WK YI+ E+  +NY   EKL +RCL+K  H+D+W  YL YV++                    G+ P     + +K+ QA+DFAL+ IG+++ S  IW++Y+  LK          E+  + AVR++Y+R    PM N+EQ+WR+Y++YE G++  LAK ++   S  YM +R V +E +T+  GL +N  +VPP
Sbjct:   19 VKKAEKKLEENPYDLDAWSILIREAQNQ-PIDKARKTYERLVAQFPSSGRFWKLYIEAEIKAKNYDKVEKLFQRCLMKVLHIDLWKCYLSYVRE------------------TKGKLP-----SYKKMAQAYDFALDKIGMEIMSYQIWVDYINFLKGV-EAVGSYAENQRITAVRRVYQRGCVNPMINIEQLWRDYNKYEEGINIHLAKKMIEDRSRDYMNARRVAKEYETVMKGLDRNAPSVPP 239
[Close]
BLAST of mRNA_M-pyrifera_M_contig82144.19212.1 vs. uniprot
Match: UPI0006447FAB (hypothetical protein n=1 Tax=Acytostelium subglobosum LB1 TaxID=1410327 RepID=UPI0006447FAB)

HSP 1 Score: 185 bits (469), Expect = 9.070e-50
Identity = 95/256 (37.11%), Postives = 150/256 (58.59%), Query Frame = 1 
Query:    4 PPFFERYTPGMRDAHRRVTENQWDVEAWSKLAVDAHTAVPLEAARSIYERLLALFPTAGRHWKAYIDLELNHRNYAFAEKLLERCLLKYPHMDIWTSYLRYVKQRYEEXXXXXXXXXXXXPNNSGRPPLPTGEALEKLKQAFDFALEHIGLDMCSTPIWIEYVALLKAQGSGTTQREESNNMMAVRKLYERAFSIPMHNLEQVWREYDQYENGLSKVLAKHLLSKLSPSYMTSRTVYREMKTISDGLSKNMLAVPP 771
            P   +R    + +   R+T +++D EAW+ L  +  +  P+  AR IYER L++FPTAGR+WK Y++ E+  RNY   EK+  R L      ++W +Y+ Y++Q                  +S +         +++ +AF+ A+E IG+D+ STPIW+EY++ LK + + T Q EE +   A+RKLY+RA   PMH+L+ +WREY+ YE   +K LAK LL+  S  Y  ++ VYR+ K + +G+ +NMLA PP
Sbjct:  173 PAIGKRLNVQIENLESRITNDKYDTEAWTLLLNEVQSQ-PINIARDIYERFLSVFPTAGRYWKLYVEQEMASRNYDMVEKIFVRSLRNVXXXELWKTYITYIRQ---------------IKGDSNK---------DEVIKAFELAIEFIGMDISSTPIWLEYLSFLKEEKTATPQ-EEGSKKTAIRKLYQRALENPMHDLDIIWREYEAYEQAWNKTLAKALLTDYSSKYQHAKQVYRDRKGLLEGILRNMLAKPP 402
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig82144.19212.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A1Z5L7D2_ORNMO7.250e-5237.80Conserved oligomeric Golgi complex subunit 6 (Frag... [more]
A0A1S3KWZ3_SALSA2.930e-5137.80cleavage stimulation factor subunit 3-like n=6 Tax... [more]
A0A6B2KZI8_9EUKA3.030e-5138.82Suf domain-containing protein n=2 Tax=Arcella inte... [more]
A0A821UDK0_9NEOP9.560e-5138.27Hypothetical protein n=2 Tax=Ditrysia TaxID=37567 ... [more]
UPI0015AE07C83.500e-5037.75cleavage stimulation factor subunit 3-like n=1 Tax... [more]
A0A8C5G210_9TELE5.130e-5038.21Cleavage stimulation factor subunit 3 n=2 Tax=Clup... [more]
A0A1E1XBA3_9ACAR6.340e-5039.02Putative mrna cleavage and polyadenylation factor ... [more]
A0A0S7GSM1_9TELE7.200e-5036.99CSTF3 (Fragment) n=1 Tax=Poeciliopsis prolifica Ta... [more]
A0A803YAX5_MELGA8.950e-5037.40Cleavage stimulation factor subunit 3 n=2 Tax=Eute... [more]
UPI0006447FAB9.070e-5037.11hypothetical protein n=1 Tax=Acytostelium subglobo... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig82144contigM-pyrifera_M_contig82144:66..836 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-19
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score184.5
Seed ortholog evalue6.3e-44
Seed eggNOG ortholog44689.DDB0233707
KEGG koko:K14408
KEGG Pathwayko03015,map03015
Hectar predicted targeting categoryother localisation
GOsGO:0000375,GO:0000377,GO:0000398,GO:0003674,GO:0003676,GO:0003723,GO:0003729,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005654,GO:0006139,GO:0006351,GO:0006353,GO:0006355,GO:0006366,GO:0006369,GO:0006378,GO:0006379,GO:0006396,GO:0006397,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0008380,GO:0009058,GO:0009059,GO:0009889,GO:0009890,GO:0009892,GO:0009987,GO:0010467,GO:0010468,GO:0010556,GO:0010558,GO:0010605,GO:0010629,GO:0016070,GO:0016071,GO:0016458,GO:0018130,GO:0019219,GO:0019222,GO:0019438,GO:0031047,GO:0031123,GO:0031124,GO:0031323,GO:0031324,GO:0031326,GO:0031327,GO:0031974,GO:0031981,GO:0032774,GO:0034641,GO:0034645,GO:0034654,GO:0034660,GO:0042868,GO:0043170,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043233,GO:0043631,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044271,GO:0044422,GO:0044424,GO:0044428,GO:0044446,GO:0044464,GO:0045892,GO:0045934,GO:0046483,GO:0048519,GO:0048523,GO:0050789,GO:0050794,GO:0051171,GO:0051172,GO:0051252,GO:0051253,GO:0060255,GO:0060968,GO:0065007,GO:0070013,GO:0071704,GO:0080090,GO:0090304,GO:0090305,GO:0090501,GO:0097159,GO:0097659,GO:1901360,GO:1901362,GO:1901363,GO:1901576,GO:1902679,GO:1903506,GO:1903507,GO:2000112,GO:2000113,GO:2001141
EggNOG free text desc.mRNA processing
EggNOG OGs3X980@554915,COG0696@1,KOG1914@2759
COG Functional cat.A
Best tax levelAmoebozoa
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko03019
Exons1
Model size771
Cds size771
Stop0
Start0
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622816728.435807-CDS-M-pyrifera_M_contig82144:65..8361622816728.435807-CDS-M-pyrifera_M_contig82144:65..836Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig82144 66..836 -
1692278144.012495-CDS-M-pyrifera_M_contig82144:65..8361692278144.012495-CDS-M-pyrifera_M_contig82144:65..836Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig82144 66..836 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig82144.19212.1prot_M-pyrifera_M_contig82144.19212.1Macrocystis pyrifera P11B4 malepolypeptideM-pyrifera_M_contig82144 66..836 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_M-pyrifera_M_contig82144.19212.1

>prot_M-pyrifera_M_contig82144.19212.1 ID=prot_M-pyrifera_M_contig82144.19212.1|Name=mRNA_M-pyrifera_M_contig82144.19212.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=257bp
PPPFFERYTPGMRDAHRRVTENQWDVEAWSKLAVDAHTAVPLEAARSIYE
RLLALFPTAGRHWKAYIDLELNHRNYAFAEKLLERCLLKYPHMDIWTSYL
RYVKQRYEEEAPPPPPPTAGGPNNSGRPPLPTGEALEKLKQAFDFALEHI
GLDMCSTPIWIEYVALLKAQGSGTTQREESNNMMAVRKLYERAFSIPMHN
LEQVWREYDQYENGLSKVLAKHLLSKLSPSYMTSRTVYREMKTISDGLSK
NMLAVPP
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mRNA from alignment at M-pyrifera_M_contig82144:66..836-

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_M-pyrifera_M_contig82144.19212.1 ID=mRNA_M-pyrifera_M_contig82144.19212.1|Name=mRNA_M-pyrifera_M_contig82144.19212.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=771bp|location=Sequence derived from alignment at M-pyrifera_M_contig82144:66..836- (Macrocystis pyrifera P11B4 male)
CCGCCCCCCTTCTTCGAGAGGTACACGCCTGGGATGAGGGACGCACACAG
GAGAGTGACGGAGAACCAGTGGGACGTGGAGGCGTGGAGCAAGCTGGCGG
TGGACGCCCACACGGCAGTGCCGCTGGAGGCTGCGAGGAGCATCTACGAG
CGCCTTCTGGCCCTCTTCCCCACGGCGGGGAGGCACTGGAAGGCATACAT
CGATCTGGAGCTGAACCACAGGAACTACGCCTTCGCCGAGAAGCTCCTCG
AGCGCTGCCTCCTCAAGTACCCCCACATGGACATCTGGACCAGCTACCTC
CGCTACGTGAAGCAGCGCTACGAGGAGGAGGCGCCTCCCCCGCCTCCCCC
CACTGCTGGAGGCCCCAACAACAGCGGACGACCGCCCCTTCCCACTGGCG
AGGCGCTGGAGAAGCTCAAGCAGGCGTTCGACTTTGCACTGGAGCACATT
GGCCTCGACATGTGCTCGACACCGATTTGGATCGAGTACGTCGCTCTCCT
GAAGGCCCAGGGCTCGGGCACGACGCAGAGGGAGGAGTCCAACAACATGA
TGGCGGTGAGGAAGCTCTACGAGAGGGCATTCTCCATCCCCATGCACAAC
CTCGAGCAGGTGTGGCGGGAGTACGACCAGTACGAGAACGGCCTCAGCAA
GGTGCTGGCCAAGCACCTCCTCAGCAAGCTCTCACCCTCCTACATGACCT
CTAGGACCGTCTACCGGGAGATGAAGACCATCAGTGACGGCCTCTCGAAG
AACATGCTTGCCGTGCCACCA
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Coding sequence (CDS) from alignment at M-pyrifera_M_contig82144:66..836-

>mRNA_M-pyrifera_M_contig82144.19212.1 ID=mRNA_M-pyrifera_M_contig82144.19212.1|Name=mRNA_M-pyrifera_M_contig82144.19212.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=1542bp|location=Sequence derived from alignment at M-pyrifera_M_contig82144:66..836- (Macrocystis pyrifera P11B4 male)
CCGCCCCCCTTCTTCGAGAGGTACACGCCTGGGATGAGGGACGCACACAG
GAGAGTGACGGAGAACCAGTGGGACGTGGAGGCGTGGAGCAAGCTGGCGG
TGGACGCCCACACGGCAGTGCCGCTGGAGGCTGCGAGGAGCATCTACGAG
CGCCTTCTGGCCCTCTTCCCCACGGCGGGGAGGCACTGGAAGGCATACAT
CGATCTGGAGCTGAACCACAGGAACTACGCCTTCGCCGAGAAGCTCCTCG
AGCGCTGCCTCCTCAAGTACCCCCACATGGACATCTGGACCAGCTACCTC
CGCTACGTGAAGCAGCGCTACGAGGAGGAGGCGCCTCCCCCGCCTCCCCC
CACTGCTGGAGGCCCCAACAACAGCGGACGACCGCCCCTTCCCACTGGCG
AGGCGCTGGAGAAGCTCAAGCAGGCGTTCGACTTTGCACTGGAGCACATT
GGCCTCGACATGTGCTCGACACCGATTTGGATCGAGTACGTCGCTCTCCT
GAAGGCCCAGGGCTCGGGCACGACGCAGAGGGAGGAGTCCAACAACATGA
TGGCGGTGAGGAAGCTCTACGAGAGGGCATTCTCCATCCCCATGCACAAC
CTCGAGCAGGTGTGGCGGGAGTACGACCAGTACGAGAACGGCCTCAGCAA
GGTGCTGGCCAAGCACCTCCTCAGCAAGCTCTCACCCTCCTACATGACCT
CTAGGACCGTCTACCGGGAGATGAAGACCATCAGTGACGGCCTCTCGAAG
AACATGCTTGCCGTGCCACCACCGCCCCCCTTCTTCGAGAGGTACACGCC
TGGGATGAGGGACGCACACAGGAGAGTGACGGAGAACCAGTGGGACGTGG
AGGCGTGGAGCAAGCTGGCGGTGGACGCCCACACGGCAGTGCCGCTGGAG
GCTGCGAGGAGCATCTACGAGCGCCTTCTGGCCCTCTTCCCCACGGCGGG
GAGGCACTGGAAGGCATACATCGATCTGGAGCTGAACCACAGGAACTACG
CCTTCGCCGAGAAGCTCCTCGAGCGCTGCCTCCTCAAGTACCCCCACATG
GACATCTGGACCAGCTACCTCCGCTACGTGAAGCAGCGCTACGAGGAGGA
GGCGCCTCCCCCGCCTCCCCCCACTGCTGGAGGCCCCAACAACAGCGGAC
GACCGCCCCTTCCCACTGGCGAGGCGCTGGAGAAGCTCAAGCAGGCGTTC
GACTTTGCACTGGAGCACATTGGCCTCGACATGTGCTCGACACCGATTTG
GATCGAGTACGTCGCTCTCCTGAAGGCCCAGGGCTCGGGCACGACGCAGA
GGGAGGAGTCCAACAACATGATGGCGGTGAGGAAGCTCTACGAGAGGGCA
TTCTCCATCCCCATGCACAACCTCGAGCAGGTGTGGCGGGAGTACGACCA
GTACGAGAACGGCCTCAGCAAGGTGCTGGCCAAGCACCTCCTCAGCAAGC
TCTCACCCTCCTACATGACCTCTAGGACCGTCTACCGGGAGATGAAGACC
ATCAGTGACGGCCTCTCGAAGAACATGCTTGCCGTGCCACCA
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