mRNA_M-pyrifera_M_contig82141.19210.1 (mRNA) Macrocystis pyrifera P11B4 male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_M-pyrifera_M_contig82141.19210.1
Unique NamemRNA_M-pyrifera_M_contig82141.19210.1
TypemRNA
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Homology
BLAST of mRNA_M-pyrifera_M_contig82141.19210.1 vs. uniprot
Match: A0A2W5Y0R9_9BACT (Uncharacterized protein n=2 Tax=Candidatus Dormibacteraeota bacterium TaxID=2052315 RepID=A0A2W5Y0R9_9BACT)

HSP 1 Score: 107 bits (266), Expect = 3.660e-22
Identity = 86/278 (30.94%), Postives = 129/278 (46.40%), Query Frame = 1
Query:   88 WTLFAVPVVLFGLPVAVYFLFKSAAAGGDFLRVTTPWMDEALYWKIPGLPLTLPLIPVMFWLRSLGLFIPLAILGSVLLSTS--EQARFMVAG-WAVFLAANFLQFQPWKHDNIKLLYVWMFIASGVVASTLVRLLLKRRSILTRLAAVIVLVSLVFSGTLALRREYGE---YSTFYTEQDVAFGKFVDKALPHDAHVLTSSRHINPVSCIAGRTIFAGYPGWLYAHGYEDYDDRLTLQQQLLDAEEGALAVLGKQGLTHLVIDTEIRYQTGFNEQYW 903
            W  F VP +L GLP   +    +  AGG   R    W+ +       G        P+ FWL++LGLF+PL +L + L   +   Q+R  +A  W  FL  N L FQPW  DN K    W  + S V+ + L RLL + R  L  + A +  V LV SG L L R   +    + F     +    +V       A  L +  H  PV  +AGR++ AGYPGWL+++G  D+  R     ++L  +    A+L +  ++++V+  +       N  YW
Sbjct:  383 WLTFFVPALLLGLPQVAWL---ATGAGGQ-PRWQIWWLADT-GGHADG--------PLWFWLKNLGLFVPL-LLAAFLWRPALPAQSRLRLAPIWLWFLIPNLLVFQPWDWDNTKFFAYWALLGSLVIGALLARLLSRGR--LGPVVAAVCFVLLVLSGGLDLARSLDQPLNQAQFADRGGLETAAWVRTNTDRHAIFLVAPEHNEPVPALAGRSVAAGYPGWLWSYGIPDWQRRAADADRMLRGDPETPALLRRYHVSYVVLGPQELGGHQANAAYW 644          
BLAST of mRNA_M-pyrifera_M_contig82141.19210.1 vs. uniprot
Match: A0A1J4JML6_9EUKA (Uncharacterized protein n=1 Tax=Tritrichomonas foetus TaxID=1144522 RepID=A0A1J4JML6_9EUKA)

HSP 1 Score: 106 bits (264), Expect = 6.710e-22
Identity = 81/270 (30.00%), Postives = 126/270 (46.67%), Query Frame = 1
Query:    1 HSFLAI-MFMVMALILLKPKNIYDPRIFAGWTLFAVPVVLFGLPVAVYFLFKSAAAGGDFLRVTTPWMDEALYWKIPGLPLTLPLIPVMFWLRSLGLFIPLAIL-GSVLLSTSEQARFMVAGWAVFLAANFLQFQPWKHDNIKLLY-VWMFIASGVVASTLVRLLLKRRSILTRLAAVIVLVSLVFSGTLALRREYGEYSTFYTEQDVAFGKFVDKALPHDAHVLTSSRHINPVSCIAGRTIFAGYPGWLYAHGYEDYDDRLTLQQQLLD 801
            HSF+AI  F +   +L  P+       F  W ++     LFGLP+   F  +    G  F+R    W D+ +Y K     L  PLI V  W + LG F  + IL G V    S Q +F  A   V+L  +F+ +QPWK DNIKLL+ VW+ IA   V    V +  K ++   +   + +++  +FS  L+   E  +        D   G ++ +  P D+  ++ S   NP + +AGR ++ G+  W   HG    +  L + + L D
Sbjct:  314 HSFVAIAQFAIATCLLFFPQKEKFWSAFFSWLIYMFCSCLFGLPLTYPFWIRQNENGSSFIRFDKLWGDD-VYGK-----LVFPLITV--WWKGLGPFGMVMILFGWVAAKDSNQMKFWGASMVVWLITSFIMYQPWKMDNIKLLFAVWVPIAVPYVTQFYVYIWRKTKNNYMKAIIIFLMIQNMFSSILSFNSELFKRLILMQVCDYHCGNWISENTPIDSIFMSYSSRFNPATALAGRQLYHGFISWTAQHGVSGPNRELKVSKLLAD 575          
BLAST of mRNA_M-pyrifera_M_contig82141.19210.1 vs. uniprot
Match: A0A535R869_9CHLR (Uncharacterized protein n=1 Tax=Chloroflexi bacterium TaxID=2026724 RepID=A0A535R869_9CHLR)

HSP 1 Score: 103 bits (257), Expect = 5.020e-21
Identity = 83/289 (28.72%), Postives = 131/289 (45.33%), Query Frame = 1
Query:   88 WTLFAVPVVLFGLPVAVYFLFKSAAAGGDFLRVTTPWM------DEALYWKIPGLPLTLPLIPVMFWLRSLGLFIPLAILGSV---LLSTSEQARFMVAGWAVFLAANFLQFQPWKHDNIKLLYVWMFIASGVVASTLVRLLLKRRSILTRLAAVIVLVSLVFSGTLALRREYGEYSTFYTEQDVA---FGKFVDKALPHDAHVLTSSRHINPVSCIAGRTIFAGYPGWLYAHGYEDYDDRLTLQQQLLDAEEGALAVLGKQGLTHLVIDTEIRYQTGF--NEQYWRDN 912
            W  F  P ++ G+P  ++ L      GG  +RV   W+       ++++W               FW+++LGLFIPL  +G     LL T+    F    W  FL  N   F PW  DN K    W  + S +VA+ +VR+   R  I+  +AA+ +LV L+ +G L   R+       Y   D A      +        A  LT+  H + +  +AGR +  GYPGW++ +G  D+  R    Q +L     +L +  + G+ ++VI  + + Q  F  N+ YWR N
Sbjct:  313 WFHFFWPALVLGVPTVLWLL----PEGGAHIRVQIGWLAAADGKHDSVFW---------------FWIKNLGLFIPLLAIGQFVRGLLPTAWATHFAPM-WLWFLVPNIWLFHPWDWDNQKFFVYWALLGSFLVAAVVVRVF--RAGIVGAVAALGLLVVLMLAGGLDAARDANFSVGGYEFTDTAGLQVAAWARSNTDPKAIFLTAPEHNSAIPTLAGRRVVLGYPGWIWTYGINDWVTRQDDVQTMLQGRPQSLDLARRYGVAYVVIGPQEK-QPPFAGNDVYWRAN 578          
BLAST of mRNA_M-pyrifera_M_contig82141.19210.1 vs. uniprot
Match: M1V8U3_CYAM1 (Uncharacterized protein n=2 Tax=Cyanidioschyzon merolae (strain NIES-3377 / 10D) TaxID=280699 RepID=M1V8U3_CYAM1)

HSP 1 Score: 103 bits (256), Expect = 8.180e-21
Identity = 65/182 (35.71%), Postives = 103/182 (56.59%), Query Frame = 1
Query:  343 RFMVAGWAVFLAANFLQFQPWKHDNIKLLYVWMFIASGVVASTLVRLLLKRRSILTRLAAVIVLVSLVFSGTLALRREYGEYST-FYTEQDVAFGKFVDKALPHDAHV-LTSSRHINPVSCIAGRTIFAGYPGWLYAHGYEDYDDRLTLQQQLLDAE----EGALAVLGKQGLTHLVIDTEI 870
            +F  A  AVF+  N     PW  DN+KL+Y+W+F A+GVV   LVRL  +R   L +L   ++L  ++FSG L +RRE+G  +   +T      G+++ KA  H   V LT+  H +P   +AGRT+++G+ GW+++HG  D  +R   Q +LL  E       L  L    ++H++++ EI
Sbjct:  509 KFFPAFAAVFVFCNLFLIPPWVKDNVKLVYIWLFQAAGVVGYLLVRLW-RRGGPLGKLLTPLILFFMIFSGLLGIRREWGGVTAELFTPAHQEVGEWI-KANTHLRSVFLTNEGHSSPACALAGRTLYSGHLGWVWSHGLRDCYEREQFQDELLRGEGRNGTELLNQLRYLRVSHILLEPEI 688          
BLAST of mRNA_M-pyrifera_M_contig82141.19210.1 vs. uniprot
Match: A0A2W5ZIU5_9BACT (Uncharacterized protein n=1 Tax=Candidatus Dormibacteraeota bacterium TaxID=2052315 RepID=A0A2W5ZIU5_9BACT)

HSP 1 Score: 102 bits (254), Expect = 1.380e-20
Identity = 83/293 (28.33%), Postives = 124/293 (42.32%), Query Frame = 1
Query:   58 NIYDPRIFAGWTLFAVPVVLFGLPVAVYFLFKSAAAGGDFLRVTTPWMDEALYWKIPGLPLTLPLIPVMFWLRSLGLFIPLAILGSVL--LSTSEQARFMVAGWAVFLAANFLQFQPWKHDNIKLLYVWMFIASGVVASTLVRLL---LKRRSILTRLAAVIVLVSLVFSGTLALRREYGEYSTFYTEQDVAFGKFVDKALPHDAH---VLTSSRHINPVSCIAGRTIFAGYPGWLYAHGYEDYDDRLTLQQQLLDAEEGALAVLGKQGLTHLVIDTEIRYQTGFNEQYWRDN 912
             ++ PR    W  F VP ++ GLP+ ++ L      GG       PW          G        P+ FWL++ GL IPL +L  V   L        +   W  FL  NF+ FQPW  DN K    W  I +  V + L RL+   L+ R+    L A++  V+L+ +G L L R      +     D    +  D    H A     L +  H  PV  + GR + AGYPGWL+ +G  D+  R      +L  + G  A++   G+ ++V+  +       +  YW  N
Sbjct:  375 TLFTPR--RQWAGFFVPALVLGLPMVLWLL-----TGGAAHARLQPWWLADTGGHHDG--------PIWFWLKNTGLLIPLMVLAFVWRGLLPPGLGLHLAPIWLWFLVPNFVVFQPWDWDNTKFFAYWALIGALPVGALLARLMAGGLRPRAPSVMLGALLA-VALMLAGALDLARTLDRSVSSAVFTDAGGIQVADWVRTHTAPRAVFLAAPEHNQPVPTLGGRAVVAGYPGWLWTYGLNDWAQRTQNVDLMLAGQPGTPALIRAYGVDYVVLGPQEVNGHRASRAYWDAN 651          
BLAST of mRNA_M-pyrifera_M_contig82141.19210.1 vs. uniprot
Match: A0A7J7IM34_9RHOD (Uncharacterized protein n=1 Tax=Cyanidiococcus yangmingshanensis TaxID=2690220 RepID=A0A7J7IM34_9RHOD)

HSP 1 Score: 97.4 bits (241), Expect = 7.480e-19
Identity = 55/176 (31.25%), Postives = 100/176 (56.82%), Query Frame = 1
Query:  364 AVFLAANFLQFQPWKHDNIKLLYVWMFIASGVVASTLVRLLLKRRSILTRLAAVIVLVSLVFSGTLALRREYGEYSTFY---TEQDVAFGKFVDKALPHDAHVLTSSRHINPVSCIAGRTIFAGYPGWLYAHGYEDYDDRLTLQQQLLDAEEG----ALAVLGKQGLTHLVIDTEI 870
            AVF+  N +  QPW  DN+KL+YVW+F ASG+ +  +VRL  +R  +L ++    +L  ++ SG L +RRE+G         T Q+VA  +++       +  LT   H++P   + GR++F GY GW+++HG  +  +R+ L+  L  +++      L  L  + ++H+++D ++
Sbjct:  516 AVFVFCNLVLIQPWVKDNVKLVYVWLFQASGMASYLMVRLW-RRGGLLGKILLPFILFVMLLSGFLGMRREWGGVMAEIFPRTNQEVA--EWIRMNTHWKSVFLTGEEHVSPACALGGRSLFIGYLGWVWSHGLPNIYERVQLRDTLFRSQDRNGTELLQTLRLRRISHILLDPQV 688          
BLAST of mRNA_M-pyrifera_M_contig82141.19210.1 vs. uniprot
Match: A0A554J889_9BACT (Uncharacterized protein (Fragment) n=1 Tax=Parcubacteria group bacterium Gr01-1014_106 TaxID=2017196 RepID=A0A554J889_9BACT)

HSP 1 Score: 96.7 bits (239), Expect = 1.240e-18
Identity = 84/266 (31.58%), Postives = 131/266 (49.25%), Query Frame = 1
Query:   94 LFAVPVVLFGLPVAVYFLFKSAAAGGDFLRVTTPWM--DEALYWKIPGLPLTLPLIPVMFWLRSLGLFIPLAILGSVLLSTSEQARFMVA---GWAVFLAANFLQFQPWKHDNIKL-LYVWMFIASGVVASTLVRLLLKRRSILTRLAAVIVLVSLVFSGTLALRREYGEYSTFYTEQDVAFGKFVDKALPHDAHVL--TSSRHINPVSCIAGRTIFAGYPGWLYAHGYEDYDDRLTLQQQLLDAEEGAL-AVLGKQGLTHLVIDT 864
            L+AV   L   PV ++       +G  FL     WM  +    W I             FWLR+LG+F+PLA++  V     ++   ++       +FL AN +QFQP++ DN K+ L VW+ +   VVA  + +       IL    ++++L+SL     +     +      YT  D A G+ +D  LP DA VL  T   H +P++ + GRT+FAGY GWL+   YE +++R  L ++L  A+ G L + +   G+T  V DT
Sbjct:  396 LYAVLAALIATPVVIWEAALFTRSG--FLSFAPGWMAGNGVFGWPI-------------FWLRNLGVFLPLAVIAIVRGYRRDRMGTLLLVQPALILFLLANSIQFQPYQWDNFKIFLVVWILLLPLVVAE-MSQWQFSSAGILRW--SLVLLMSLTTLSEVVTHLHFRATYPVYTTADRAIGRELDSMLPKDAVVLARTDMNHNHPLT-LTGRTLFAGYGGWLWTRNYE-WEERAALVERLWRADAGILCSFVSCIGITQRVDDT 641          
BLAST of mRNA_M-pyrifera_M_contig82141.19210.1 vs. uniprot
Match: A0A1F5G1F0_9BACT (Uncharacterized protein n=1 Tax=Candidatus Curtissbacteria bacterium RBG_13_35_7 TaxID=1797705 RepID=A0A1F5G1F0_9BACT)

HSP 1 Score: 94.0 bits (232), Expect = 9.930e-18
Identity = 75/301 (24.92%), Postives = 145/301 (48.17%), Query Frame = 1
Query:    1 HSFLAIMFMVMALILLKPKNIYDPRIFAGWTLFAVPVVLFGLPVAVYFLFKSAAAGGDFLRVTTPWMDEALYWKIPGLPLTLPLIPVMFWLRSLGLFIPLAILGSVLLSTSEQARFMVAGWAVFLAANFLQFQPWKHDNIKLLYVWMFIASGVVASTLVRLLLKRRSILTRLAAVIVLVSLVFSGTLALRRE-YGEYSTFYTEQDVAFGKFVDKALPHDAHVLTSSRHINPVSCIAGRTIFAGYPGWLYAHGYEDYDDRLTLQQQLLDAEEGALAVLGKQGLTHLVIDTEIRYQTGFNEQY 900
            HS +AI+ ++    L+   NI +   F  + LF   V+     + + ++  + +   +FL +   WM                  P+ F+L++LGL +PL +L   ++ T +  +  +    +F+  N + FQP  +DN+K++  W F+AS V+ S  ++ L + R +++R+   ++L  L+ +G L++ RE Y  Y  +  E      +      PHD  +LTS +H +P++  +GR I  GY GWL+  GY +Y +R      +   +   + ++ K  +  +V+    R     N+ +
Sbjct:  318 HSLIAIVIIISVSFLIH-FNIQNILNFIKYYLFIFIVIA---TIPILWIISADSLDRNFLNIQFFWMANKDN-------------PLWFYLKNLGLVLPLILLSFFIVPT-KLIKTYIPFATIFIVTNIIVFQPHDYDNMKIMLYW-FLASLVLISYFLQNLWQERWLISRILFCVLLFFLIITGVLSVFRESYAIYQIYDREGLELANRIRLITSPHDV-ILTSDQHNHPITSFSGRPIVMGYRGWLWTWGY-NYQEREKDISNIYQGKRDMIKLIKKYNIAFIVVGPSERNMFLINDSF 597          
BLAST of mRNA_M-pyrifera_M_contig82141.19210.1 vs. uniprot
Match: A0A3D3Y5M8_9FIRM (Uncharacterized protein n=1 Tax=Oscillospiraceae bacterium TaxID=2485925 RepID=A0A3D3Y5M8_9FIRM)

HSP 1 Score: 91.3 bits (225), Expect = 8.680e-17
Identity = 83/300 (27.67%), Postives = 138/300 (46.00%), Query Frame = 1
Query:   13 AIMFMVMALILLKPKNIYDPRIFAGWTLFAVPVVLFGLPVAVYFLFKSAAAGGDFLRVTTPW--MDEALYWKIPGLPLTLPLIPVMFWLRSLGLFIPLAILGSVLLSTSEQARFMVAGWA--VFLAANFLQFQPWKHDNIKLLYVWMFIASGVVASTLVRLLLKRRSILTRLA-AVIVLVSLVFSGTLALRREYGEYSTFYTEQDVAFGKFV-DKALPHDAHVLTSSRHINPVSCIAGRTIFAGYPGWLYAHGYEDYDDRLTLQQQLLDAEEGALAVLGKQGLTHLVIDTEIRYQTGFNE 894
            A +  V+AL+ +  +  +  ++   W +F +  +L   P    + F S A+G  F+R    W  + +   W               F+L +LG+    A+L      T++Q RF V   A  ++    F+ FQP  +DN KLLY   F+  GVVAS +V +  + R++  R A AV  LV  + S  L + RE       Y +  +   +++ + + P D  VLT  RH N ++ + GR I  G   ++Y HG  DY +R T  Q +  A +   A+  K  + ++++    R     NE
Sbjct:  403 AFVLFVLALLTMAIRKGFGIQLVKTWGVFLLITLLLAAPQLFTWTF-SQASGDSFMRGWYNWGNLQDGYLW---------------FYLVNLGVT---ALLFLPAFFTADQRRFTVCAPAAVIWFICEFVVFQPNTYDNNKLLYAAYFLVCGVVASYMVEIYRRLRTLPGRRALAVGALVLCMLSAVLTIGRESIAGYCLYGDSQLKAAEYIYENSEPEDT-VLTDMRHNNEIAALTGRNIVCGSTSYVYFHGL-DYTERETDMQSMFSAPQANCALFEKYSIDYILVSAYERNNFTVNE 681          
BLAST of mRNA_M-pyrifera_M_contig82141.19210.1 vs. uniprot
Match: A0A351EDT8_9FIRM (Uncharacterized protein (Fragment) n=1 Tax=Oscillospiraceae bacterium TaxID=2485925 RepID=A0A351EDT8_9FIRM)

HSP 1 Score: 90.9 bits (224), Expect = 9.150e-17
Identity = 79/287 (27.53%), Postives = 133/287 (46.34%), Query Frame = 1
Query:   13 AIMFMVMALILLKPKNIYDPRIFAGWTLFAVPVVLFGLPVAVYFLFKSAAAGGDFLRVTTPW--MDEALYWKIPGLPLTLPLIPVMFWLRSLGLFIPLAILGSVLLSTSEQARFMVAGWA--VFLAANFLQFQPWKHDNIKLLYVWMFIASGVVASTLVRLLLKRRSILTRLA-AVIVLVSLVFSGTLALRREYGEYSTFYTEQDVAFGKFVDKALPHDAHVLTSSRHINPVSCIAGRTIFAGYPGWLYAHGYEDYDDRLTLQQQLLDAEEGALAVLGKQGLTHLVI 858
            A +  V+AL+ +  +  +  ++   W +F +  +L   P    + F S A+G  F+R    W  + +   W               F+L +LG+    A+L      T++Q RF V   A  ++    F+ FQP  +DN KLLY   F+  GVVAS +V +  + R++  R A AV  LV  V S  L + RE       Y +  +   +++ +    +  VLT  RH N ++ + GR I  G   ++Y HG  DY +R T  Q +  A +   A+  K  + ++++
Sbjct:  207 AFVLFVLALLTMAIRKGFGIQLVKTWGVFLLITLLLAAPQLFTWTF-SQASGESFMRGWYNWGNLQDGYLW---------------FYLVNLGVT---ALLFLPAFFTADQRRFTVCAPAAVIWFICEFVVFQPNTYDNNKLLYAAYFLVCGVVASYMVEIYRRLRTLPGRRALAVGALVLCVLSAVLTIGRESIAGYCLYGDSQLKAAEYIYENTEPEDTVLTDMRHNNEIAALTGRNIVCGSTSYVYFHGL-DYTERETDMQSMFSAPQANCALFEKYSIDYILV 473          
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig82141.19210.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 21
Match NameE-valueIdentityDescription
A0A2W5Y0R9_9BACT3.660e-2230.94Uncharacterized protein n=2 Tax=Candidatus Dormiba... [more]
A0A1J4JML6_9EUKA6.710e-2230.00Uncharacterized protein n=1 Tax=Tritrichomonas foe... [more]
A0A535R869_9CHLR5.020e-2128.72Uncharacterized protein n=1 Tax=Chloroflexi bacter... [more]
M1V8U3_CYAM18.180e-2135.71Uncharacterized protein n=2 Tax=Cyanidioschyzon me... [more]
A0A2W5ZIU5_9BACT1.380e-2028.33Uncharacterized protein n=1 Tax=Candidatus Dormiba... [more]
A0A7J7IM34_9RHOD7.480e-1931.25Uncharacterized protein n=1 Tax=Cyanidiococcus yan... [more]
A0A554J889_9BACT1.240e-1831.58Uncharacterized protein (Fragment) n=1 Tax=Parcuba... [more]
A0A1F5G1F0_9BACT9.930e-1824.92Uncharacterized protein n=1 Tax=Candidatus Curtiss... [more]
A0A3D3Y5M8_9FIRM8.680e-1727.67Uncharacterized protein n=1 Tax=Oscillospiraceae b... [more]
A0A351EDT8_9FIRM9.150e-1727.53Uncharacterized protein (Fragment) n=1 Tax=Oscillo... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig82141contigM-pyrifera_M_contig82141:3..917 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-19
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score107.5
Seed ortholog evalue1.1e-20
Seed eggNOG ortholog45157.CMO170CT
Hectar predicted targeting categorysignal anchor
EggNOG OGs2D3D5@1,2SR4Z@2759
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
Exons1
Model size915
Cds size897
Stop0
Start1
Relationships

The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622816728.3487647-UTR-M-pyrifera_M_contig82141:2..201622816728.3487647-UTR-M-pyrifera_M_contig82141:2..20Macrocystis pyrifera P11B4 maleUTRM-pyrifera_M_contig82141 3..20 +
1692278143.9771676-UTR-M-pyrifera_M_contig82141:2..201692278143.9771676-UTR-M-pyrifera_M_contig82141:2..20Macrocystis pyrifera P11B4 maleUTRM-pyrifera_M_contig82141 3..20 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622816728.3607821-CDS-M-pyrifera_M_contig82141:20..9171622816728.3607821-CDS-M-pyrifera_M_contig82141:20..917Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig82141 21..917 +
1692278143.9890978-CDS-M-pyrifera_M_contig82141:20..9171692278143.9890978-CDS-M-pyrifera_M_contig82141:20..917Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig82141 21..917 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig82141.19210.1prot_M-pyrifera_M_contig82141.19210.1Macrocystis pyrifera P11B4 malepolypeptideM-pyrifera_M_contig82141 21..917 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_M-pyrifera_M_contig82141.19210.1

>prot_M-pyrifera_M_contig82141.19210.1 ID=prot_M-pyrifera_M_contig82141.19210.1|Name=mRNA_M-pyrifera_M_contig82141.19210.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=299bp
MFMVMALILLKPKNIYDPRIFAGWTLFAVPVVLFGLPVAVYFLFKSAAAG
GDFLRVTTPWMDEALYWKIPGLPLTLPLIPVMFWLRSLGLFIPLAILGSV
LLSTSEQARFMVAGWAVFLAANFLQFQPWKHDNIKLLYVWMFIASGVVAS
TLVRLLLKRRSILTRLAAVIVLVSLVFSGTLALRREYGEYSTFYTEQDVA
FGKFVDKALPHDAHVLTSSRHINPVSCIAGRTIFAGYPGWLYAHGYEDYD
DRLTLQQQLLDAEEGALAVLGKQGLTHLVIDTEIRYQTGFNEQYWRDNY
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mRNA from alignment at M-pyrifera_M_contig82141:3..917+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_M-pyrifera_M_contig82141.19210.1 ID=mRNA_M-pyrifera_M_contig82141.19210.1|Name=mRNA_M-pyrifera_M_contig82141.19210.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=915bp|location=Sequence derived from alignment at M-pyrifera_M_contig82141:3..917+ (Macrocystis pyrifera P11B4 male)
CACTCTTTCCTCGCCATCATGTTCATGGTCATGGCCCTCATTCTCCTCAA GCCAAAGAACATCTACGACCCGCGAATCTTTGCTGGATGGACGCTCTTCG CGGTTCCTGTCGTTCTCTTTGGTCTCCCTGTTGCTGTTTACTTCCTCTTC AAGAGCGCAGCTGCAGGTGGCGACTTCCTCAGAGTAACCACCCCTTGGAT GGACGAGGCACTCTACTGGAAGATTCCTGGCCTTCCCCTCACCCTCCCAC TGATCCCTGTGATGTTTTGGCTGCGTTCTCTTGGCCTTTTCATCCCTCTC GCCATCCTTGGGTCGGTGCTGCTCTCCACCAGCGAGCAGGCTCGCTTCAT GGTCGCCGGCTGGGCAGTTTTCCTTGCAGCGAACTTTCTCCAGTTCCAGC CTTGGAAGCACGACAACATCAAGCTCCTCTATGTGTGGATGTTCATCGCC AGTGGTGTGGTGGCGTCTACGCTCGTGCGGCTCCTCTTGAAGAGGCGCTC CATACTGACGAGGCTGGCCGCTGTTATTGTGCTGGTGTCGCTCGTGTTCT CTGGTACACTTGCGTTGAGGAGAGAGTACGGAGAGTACAGCACTTTCTAC ACTGAGCAAGACGTTGCCTTTGGCAAGTTCGTGGACAAAGCCCTGCCCCA CGACGCCCACGTCCTCACCAGCTCTCGCCACATCAACCCCGTCAGTTGCA TTGCTGGAAGGACGATCTTCGCTGGCTATCCAGGATGGCTATATGCGCAT GGCTACGAAGACTATGACGATCGTCTCACTCTCCAACAGCAGCTCCTCGA CGCAGAGGAGGGGGCGTTGGCTGTGCTGGGCAAGCAAGGCCTTACCCACT TGGTGATCGACACGGAGATCCGCTACCAGACTGGCTTCAACGAGCAGTAC TGGCGCGACAACTAC
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Coding sequence (CDS) from alignment at M-pyrifera_M_contig82141:3..917+

>mRNA_M-pyrifera_M_contig82141.19210.1 ID=mRNA_M-pyrifera_M_contig82141.19210.1|Name=mRNA_M-pyrifera_M_contig82141.19210.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=1794bp|location=Sequence derived from alignment at M-pyrifera_M_contig82141:3..917+ (Macrocystis pyrifera P11B4 male)
ATGTTCATGGTCATGGCCCTCATTCTCCTCAAGCCAAAGAACATCTACGA
CCCGCGAATCTTTGCTGGATGGACGCTCTTCGCGGTTCCTGTCGTTCTCT
TTGGTCTCCCTGTTGCTGTTTACTTCCTCTTCAAGAGCGCAGCTGCAGGT
GGCGACTTCCTCAGAGTAACCACCCCTTGGATGGACGAGGCACTCTACTG
GAAGATTCCTGGCCTTCCCCTCACCCTCCCACTGATCCCTGTGATGTTTT
GGCTGCGTTCTCTTGGCCTTTTCATCCCTCTCGCCATCCTTGGGTCGGTG
CTGCTCTCCACCAGCGAGCAGGCTCGCTTCATGGTCGCCGGCTGGGCAGT
TTTCCTTGCAGCGAACTTTCTCCAGTTCCAGCCTTGGAAGCACGACAACA
TCAAGCTCCTCTATGTGTGGATGTTCATCGCCAGTGGTGTGGTGGCGTCT
ACGCTCGTGCGGCTCCTCTTGAAGAGGCGCTCCATACTGACGAGGCTGGC
CGCTGTTATTGTGCTGGTGTCGCTCGTGTTCTCTGGTACACTTGCGTTGA
GGAGAGAGTACGGAGAGTACAGCACTTTCTACACTGAGCAAGACGTTGCC
TTTGGCAAGTTCGTGGACAAAGCCCTGCCCCACGACGCCCACGTCCTCAC
CAGCTCTCGCCACATCAACCCCGTCAGTTGCATTGCTGGAAGGACGATCT
TCGCTGGCTATCCAGGATGGCTATATGCGCATGGCTACGAAGACTATGAC
GATCGTCTCACTCTCCAACAGCAGCTCCTCGACGCAGAGGAGGGGGCGTT
GGCTGTGCTGGGCAAGCAAGGCCTTACCCACTTGGTGATCGACACGGAGA
TCCGCTACCAGACTGGCTTCAACGAGCAGTACTGGCGCGACAACTACATG
TTCATGGTCATGGCCCTCATTCTCCTCAAGCCAAAGAACATCTACGACCC
GCGAATCTTTGCTGGATGGACGCTCTTCGCGGTTCCTGTCGTTCTCTTTG
GTCTCCCTGTTGCTGTTTACTTCCTCTTCAAGAGCGCAGCTGCAGGTGGC
GACTTCCTCAGAGTAACCACCCCTTGGATGGACGAGGCACTCTACTGGAA
GATTCCTGGCCTTCCCCTCACCCTCCCACTGATCCCTGTGATGTTTTGGC
TGCGTTCTCTTGGCCTTTTCATCCCTCTCGCCATCCTTGGGTCGGTGCTG
CTCTCCACCAGCGAGCAGGCTCGCTTCATGGTCGCCGGCTGGGCAGTTTT
CCTTGCAGCGAACTTTCTCCAGTTCCAGCCTTGGAAGCACGACAACATCA
AGCTCCTCTATGTGTGGATGTTCATCGCCAGTGGTGTGGTGGCGTCTACG
CTCGTGCGGCTCCTCTTGAAGAGGCGCTCCATACTGACGAGGCTGGCCGC
TGTTATTGTGCTGGTGTCGCTCGTGTTCTCTGGTACACTTGCGTTGAGGA
GAGAGTACGGAGAGTACAGCACTTTCTACACTGAGCAAGACGTTGCCTTT
GGCAAGTTCGTGGACAAAGCCCTGCCCCACGACGCCCACGTCCTCACCAG
CTCTCGCCACATCAACCCCGTCAGTTGCATTGCTGGAAGGACGATCTTCG
CTGGCTATCCAGGATGGCTATATGCGCATGGCTACGAAGACTATGACGAT
CGTCTCACTCTCCAACAGCAGCTCCTCGACGCAGAGGAGGGGGCGTTGGC
TGTGCTGGGCAAGCAAGGCCTTACCCACTTGGTGATCGACACGGAGATCC
GCTACCAGACTGGCTTCAACGAGCAGTACTGGCGCGACAACTAC
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