mRNA_M-pyrifera_M_contig82097.19204.1 (mRNA) Macrocystis pyrifera P11B4 male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_M-pyrifera_M_contig82097.19204.1
Unique NamemRNA_M-pyrifera_M_contig82097.19204.1
TypemRNA
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Homology
BLAST of mRNA_M-pyrifera_M_contig82097.19204.1 vs. uniprot
Match: A0A2E7KJ98_9PLAN (Uncharacterized protein n=3 Tax=Gimesia TaxID=1649453 RepID=A0A2E7KJ98_9PLAN)

HSP 1 Score: 603 bits (1555), Expect = 2.820e-217
Identity = 303/306 (99.02%), Postives = 306/306 (100.00%), Query Frame = 1
Query:    1 RFPPEVFAAPLPQSDPFESEVSPQFSEIREAIDEDDYEQALRLLTEKRVIAVKVKNQFLLQEILAEIKEVNRLKREFSKVREKAETLKTKPGDPEANEKVGLFYCAEKGDWIAGLKMLSKSGDSGLRQAALDDLKQPETPAHRMELADAWWEQAEKEKDQIRKAFLLRGRYWYLSARPGLTELERFERDKQLEQIVLEADKIVVWNMHGSTLDHGTDECVLTLFLKGKAVWRQKVVVPWKAKAPAGQIVYPPRVRFDQIRVDITKYRGFGGGLGEIEVFDGTINVARNCSAVASSYWRSNRNHHPD 918
            RFPPEVFAAPLPQSDPFESEVSPQFSEIREAIDEDDYEQALRLLTEKRV+AVKVKNQFLLQEILAEIKEVNRLKREFSKVREKAETLKTKPGDPEANEKVGLFYCAEKGDWIAGLKMLSKSGDSGLRQAALDDLK+PETPAHRM+LADAWWEQAEKEKDQIRKAFLLRGRYWYLSARPGLTELERFERDKQLEQIVLEADKIVVWNMHGSTLDHGTDECVLTLFLKGKAVWRQKVVVPWKAKAPAGQIVYPPRVRFDQIRVDITKYRGFGGGLGEIEVFDGTINVARNCSAVASSYWRSNRNHHPD
Sbjct:    4 RFPPEVFAAPLPQSDPFESEVSPQFSEIREAIDEDDYEQALRLLTEKRVVAVKVKNQFLLQEILAEIKEVNRLKREFSKVREKAETLKTKPGDPEANEKVGLFYCAEKGDWIAGLKMLSKSGDSGLRQAALDDLKRPETPAHRMKLADAWWEQAEKEKDQIRKAFLLRGRYWYLSARPGLTELERFERDKQLEQIVLEADKIVVWNMHGSTLDHGTDECVLTLFLKGKAVWRQKVVVPWKAKAPAGQIVYPPRVRFDQIRVDITKYRGFGGGLGEIEVFDGTINVARNCSAVASSYWRSNRNHHPD 309          
BLAST of mRNA_M-pyrifera_M_contig82097.19204.1 vs. uniprot
Match: A0A517X242_9PLAN (Uncharacterized protein n=2 Tax=Gimesia aquarii TaxID=2527964 RepID=A0A517X242_9PLAN)

HSP 1 Score: 355 bits (912), Expect = 4.860e-119
Identity = 173/306 (56.54%), Postives = 230/306 (75.16%), Query Frame = 1
Query:    4 FPPEVFAAPLPQSDPFESEVSPQFSEIREAIDEDDYEQALRLLTEKRVIAVKVKNQFLLQEILAEIKEVNRLKREFSKVREKAETLKTKPGDPEANEKVGLFYCAEKGDWIAGLKMLSKSGDSGLRQAALDDLKQPETPAHRMELADAWWEQAEKEKDQIRKAFLLRGRYWYLSARPGLTELERFERDKQLEQIVLEADKIVVWNMH-GSTLDHGTDECVLTLFLKGKAVWRQKVVVPWKAKAPAGQIVYPPRVRFDQIRVDITKYRGFGGGLGEIEVFDGTINVARNCSAVASSYWRSNRNHHPD 918
            +P  +FA   PQSDPF+ EV  +FSE+R+A+D DDY+QAL+LL+  R+ +VK KN+ L +E+++ +K+VN+ KREF+KVR+  ETLK K  DP+A ++VG FYCA K DW  GL +LSKS +  LRQ  L DLK+P  PA + +LADAWW+ A +EK  +RKA+ LRGRYWYL ARP L   ER  R+K+L+QI++EADKIV+WN H GS  D GT EC++TL  KGK+VWRQK  +PW+   PA +++ PP VRFDQ+R+D+TK RG GGGLGE+EVFDG INVARNCS +++ YW  N + HP+
Sbjct:   32 YPSGIFAQKPPQSDPFDVEVPLEFSEVRKALDRDDYDQALKLLSNLRIKSVKEKNKVLQEEVISTMKQVNQQKREFAKVRQSYETLKKKSIDPKAYKQVGDFYCAVKADWKKGLLLLSKSSNPALRQTVLADLKRPTIPAQQAQLADAWWKLAAQEKGNVRKAYQLRGRYWYLHARPRLPIKERVGREKKLQQIIIEADKIVIWNQHNGSYSDRGTTECIVTLLYKGKSVWRQKAQIPWEPDTPANRVLRPPHVRFDQVRIDVTKIRGKGGGLGEVEVFDGNINVARNCSTISNGYWEKNPSFHPN 337          
BLAST of mRNA_M-pyrifera_M_contig82097.19204.1 vs. uniprot
Match: A0A517RIJ5_9PLAN (Uncharacterized protein n=1 Tax=Gimesia alba TaxID=2527973 RepID=A0A517RIJ5_9PLAN)

HSP 1 Score: 330 bits (845), Expect = 6.890e-109
Identity = 168/303 (55.45%), Postives = 219/303 (72.28%), Query Frame = 1
Query:   10 PEVFAAPLPQSDPFESEVSPQFSEIREAIDEDDYEQALRLLTEKRVIAVKVKNQFLLQEILAEIKEVNRLKREFSKVREKAETLKTKPGDPEANEKVGLFYCAEKGDWIAGLKMLSKSGDSGLRQAALDDLKQPETPAHRMELADAWWEQAEKEKDQIRKAFLLRGRYWYLSARPGLTELERFERDKQLEQIVLEADKIVVWNMH-GSTLDHGTDECVLTLFLKGKAVWRQKVVVPWKAKAPAGQIVYPPRVRFDQIRVDITKYRGFGGGLGEIEVFDGTINVARNCSAVASSYWRSNRNHHP 915
            P++FA   P SDPF+ E+  +FSE+ +A+ +++Y+QAL+LL+  R  A+K +N+ L  EI A+IKEVNRLKREF K++   E +K K  DPEA   +G FYC EKGDW AGL +L++S  + LR+ A  DLK+P TP  + +LADAWW+ A +EK + RKA+ LRGRYWY+ ARP L+ ++R +RDKQL  I LEADKIV+WN H G   D GT  CV+TL  +GK VWRQ V +PW   APA   V PP VRFDQ+RVD+T +RG GGGLGE+EVFDGTIN+++NCSAVA  Y+  NR  HP
Sbjct:   35 PDIFAQTPPVSDPFDQEIPLEFSEVTKALSQNNYDQALKLLSALRKDALKTRNKTLQTEIFAKIKEVNRLKREFDKLQSDYEAMK-KSNDPEACRIIGNFYCIEKGDWRAGLHLLTRSNSADLRKTAAADLKRPVTPEEQAKLADAWWKVASEEKGKSRKAYFLRGRYWYMLARPRLSAVDRLDRDKQLSFIPLEADKIVIWNQHNGVNGDRGTLACVVTLLYQGKPVWRQSVRLPWLLDAPASATVKPPHVRFDQVRVDVTNFRGRGGGLGEVEVFDGTINLSQNCSAVAKEYFEENRQFHP 336          
BLAST of mRNA_M-pyrifera_M_contig82097.19204.1 vs. uniprot
Match: A0A518A979_9PLAN (Uncharacterized protein n=4 Tax=Gimesia panareensis TaxID=2527978 RepID=A0A518A979_9PLAN)

HSP 1 Score: 316 bits (810), Expect = 9.580e-104
Identity = 165/295 (55.93%), Postives = 211/295 (71.53%), Query Frame = 1
Query:   37 QSDPFESEVSPQFSEIREAIDEDDYEQALRLLTEKRVIAVKVKNQFLLQEILAEIKEVNRLKREFSKVREKAET-LKTKPGDPEANEKVGLFYCAEKGDWIAGLKMLSKSGDSGLRQAALDDLKQPETPAHRMELADAWWEQAEKEKDQIRKAFLLRGRYWYLSARPGLTELERFERDKQLEQIVLEADKIVVWNMH-GSTLDHGTDECVLTLFLKGKAVWRQKVVVPWKAKAPAGQIVYPPRVRFDQIRVDITKYRGFGGGLGEIEVFDGTINVARNCSAVASSYWRSNRNHHP 915
            +SDPF+ EV  +   + +A+ +++++QAL+LL + R  A+K +N+ L  EI+  +KEVNRLKREF KV++  ET LK+K  DPEA   +  FYC EK DW +GL+ L+KS    L + A  DLK+P +P ++  LADAWW+ AE EK ++RKA+LLRGRYWYL ARP L  +ER +RDK+L  I LEADKIV+WN H G  LD GT+ CV+TL L+GK VWR+   +PW   APA Q + PP VRFDQIRVD+T+YRG GGGLGEIEVFD  INVA NCS VAS YW  N  HHP
Sbjct:   33 RSDPFDQEVPLELHGVTQALQQNNFDQALKLLADLRKDALKTRNRQLQAEIITSMKEVNRLKREFIKVKKDYETFLKSK--DPEAARVISNFYCLEKCDWNSGLQFLTKSDSPELLKTAAADLKRPSSPENQARLADAWWQVAEAEKGKVRKAYLLRGRYWYLLARPSLPAVERVDRDKKLALIPLEADKIVIWNQHNGQYLDRGTEACVVTLLLQGKPVWRKATRIPWDQDAPACQTLNPPAVRFDQIRVDVTQYRGNGGGLGEIEVFDNKINVASNCSVVASEYWEDNPKHHP 325          
BLAST of mRNA_M-pyrifera_M_contig82097.19204.1 vs. uniprot
Match: A0A2E7KA17_9PLAN (Uncharacterized protein n=5 Tax=Gimesia TaxID=1649453 RepID=A0A2E7KA17_9PLAN)

HSP 1 Score: 314 bits (805), Expect = 5.470e-103
Identity = 161/292 (55.14%), Postives = 209/292 (71.58%), Query Frame = 1
Query:   43 DPFESEVSPQFSEIREAIDEDDYEQALRLLTEKRVIAVKVKNQFLLQEILAEIKEVNRLKREFSKVREKAETLKTKPGDPEANEKVGLFYCAEKGDWIAGLKMLSKSGDSGLRQAALDDLKQPETPAHRMELADAWWEQAEKEKDQIRKAFLLRGRYWYLSARPGLTELERFERDKQLEQIVLEADKIVVWNMHGSTL-DHGTDECVLTLFLKGKAVWRQKVVVPWKAKAPAGQIVYPPRVRFDQIRVDITKYRGFGGGLGEIEVFDGTINVARNCSAVASSYWRSNRNHHP 915
            DPF+ EV  +   + +A+ +++++QAL+LL + R  A+K +N+ L  EI+  +KEVNRLKREF KV+ + E+L  K  DP A   +G FYC EK DW AGLK+L KS    LR+ A  DL+ P TP  ++ LADAWW+ AE+EK Q+RKA+LLRGRYWYL ARP +   ER +RDK+L  I LEAD+IV+WN H +   D GT+ CV+TL L+GK VWR+ + +PW+  +PA Q + PP VRFDQIRVD+T++RG GGGLGEIEVFD  INVARNCS VAS YW  N  HHP
Sbjct:   35 DPFDREVPLELRGVTQALQQNNFDQALKLLADLRKDALKTRNRRLQAEIVTSMKEVNRLKREFIKVKNEYESL-LKSQDPAAARVIGNFYCLEKCDWKAGLKLLLKSDSPALRKTAAFDLQLPATPESQVRLADAWWQVAEEEKGQVRKAYLLRGRYWYLQARPHIPAAERVDRDKKLALIPLEADQIVIWNQHNAHYSDRGTEACVVTLLLQGKPVWRKAIRIPWEKDSPAFQTLNPPGVRFDQIRVDVTQFRGNGGGLGEIEVFDNKINVARNCSVVASEYWEQNPKHHP 325          
BLAST of mRNA_M-pyrifera_M_contig82097.19204.1 vs. uniprot
Match: A0A517VNM4_9PLAN (Uncharacterized protein n=1 Tax=Gimesia aquarii TaxID=2527964 RepID=A0A517VNM4_9PLAN)

HSP 1 Score: 313 bits (801), Expect = 2.850e-102
Identity = 161/297 (54.21%), Postives = 217/297 (73.06%), Query Frame = 1
Query:   10 PEVFAAPLPQSDPFESEVSPQFSEIREAIDEDDYEQALRLLTEKRVIAVKVKNQFLLQEILAEIKEVNRLKREFSKVREKAETLKTKPGDPEANEKVGLFYCAEKGDWIAGLKMLSKSGDSGLRQAALDDLKQPETPAHRMELADAWWEQAEKEKDQIRKAFLLRGRYWYLSARPGLTELERFERDKQLEQIVLEADKIVVWNMH-GSTLDHGTDECVLTLFLKGKAVWRQKVVVPWKAKAPAGQIVYPPRVRFDQIRVDITKYRGFGGGLGEIEVFDGTINVARNCSAVASSYWRS 897
            PE+ A    Q+DPF+ +VS +F+EI +A+ +DDY+ A + L++K  +AV+VKN+ LL+E+L   KEVNRLK EF  VR+  ETLK  P DP+ANE+VG+FYCA KGDW  GL++LS++ +  +++ A  DLK+P   + R++LAD WW+ A+      RKA  LRGRYWYL ARP LT   R   DK+L+QI L A+KIV+WN H G   ++GT  C + L   GK+VWRQ V VPWK+ AP+ +IV+PP VRFDQIRVDIT++ G GGGLGE+EVFDGTINVA+NCSA AS ++++
Sbjct:   34 PEIAAQTQSQTDPFDVDVSVEFAEIYQAMKKDDYDLAEKRLSKKHALAVRVKNRILLEEVLVVKKEVNRLKLEFDNVRKYYETLKKNPKDPQANEQVGIFYCAVKGDWGIGLQLLSRAKNVTIQRTARTDLKRPVDHSERVKLADVWWKLADGTMGPFRKACQLRGRYWYLLARPNLTLAMRLNFDKRLQQIPLIANKIVIWNQHNGPHFNYGTITCRVALLYSGKSVWRQVVQVPWKSDAPSSRIVHPPDVRFDQIRVDITRFVGLGGGLGELEVFDGTINVAKNCSAFASDFYQN 330          
BLAST of mRNA_M-pyrifera_M_contig82097.19204.1 vs. uniprot
Match: A0A517RIL1_9PLAN (Uncharacterized protein n=1 Tax=Gimesia alba TaxID=2527973 RepID=A0A517RIL1_9PLAN)

HSP 1 Score: 309 bits (792), Expect = 7.210e-101
Identity = 162/294 (55.10%), Postives = 208/294 (70.75%), Query Frame = 1
Query:   37 QSDPFESEVSPQFSEIREAIDEDDYEQALRLLTEKRVIAVKVKNQFLLQEILAEIKEVNRLKREFSKVREKAETLKTKPGDPEANEKVGLFYCAEKGDWIAGLKMLSKSGDSGLRQAALDDLKQPETPAHRMELADAWWEQAEKEKDQIRKAFLLRGRYWYLSARPGLTELERFERDKQLEQIVLEADKIVVWNMH-GSTLDHGTDECVLTLFLKGKAVWRQKVVVPWKAKAPAGQIVYPPRVRFDQIRVDITKYRGFGGGLGEIEVFDGTINVARNCSAVASSYWRSNRNHHP 915
            Q DPF     P+FS + +A+ ++DY+ AL+L ++ R  A+K +N+ L  E++A IKEVNRLKREF K+    E ++ K  DPEA   +G FYC +KGDW AGLK+L+KS    L+  A  DLK+P TP  + +LADAWW+ AEKEK   RKA+LLRGRYWYL ARP L  +E  +R+K+L QI L +DKIV+WN H G   +HGTDEC++TL  +GK+VWRQ V VPWK  APA +++ PP VRFDQI+VDITKY   GGGLGEIEVFDGTIN+ +N SA A  Y  + R  HP
Sbjct:   44 QPDPFNQVSGPEFSAVVKAVSQNDYDLALKLSSDLRRDAIKTRNRELQSEVIATIKEVNRLKREFHKLGSVYELMQ-KSKDPEACRTIGNFYCLDKGDWQAGLKLLTKSDSPDLQATAAADLKRPVTPEEQAKLADAWWKVAEKEKGVTRKAYLLRGRYWYLLARPRLPAIECVDRNKKLLQIPLSSDKIVIWNQHNGEYANHGTDECIVTLLYQGKSVWRQVVRVPWKPDAPAYRVIRPPNVRFDQIKVDITKYLKKGGGLGEIEVFDGTINLVQNSSAFAKEYHGNERTFHP 336          
BLAST of mRNA_M-pyrifera_M_contig82097.19204.1 vs. uniprot
Match: A0A517ZUE3_9PLAN (Uncharacterized protein n=2 Tax=Symmachiella dynata TaxID=2527995 RepID=A0A517ZUE3_9PLAN)

HSP 1 Score: 231 bits (588), Expect = 3.540e-70
Identity = 124/296 (41.89%), Postives = 177/296 (59.80%), Query Frame = 1
Query:   34 PQSDPFESEVSPQFSEIREAIDEDDYEQALRLLTEKRVIAVKVKNQFLLQEILAEIKEVNRLKREFSKVREKAETLKTKPGDPEANEKVGLFYCAEKGDWIAGLKMLSKSGDSGLRQAALDDLKQPETPAHRMELADAWWEQAEKEKDQ-IRKAFLLRGRYWYLSARPGLTELERFERDKQLEQIVLEADKIVVWNMH-GSTLDHGTDECVLTLFLKGKAVWRQKVVVPWKAKAPAGQIVYPPRVRFDQIRVDITKYRGFGGGLGEIEVFDGTINVARNCSAVASSYWRSNRNHHP 915
            P SDPF+ + SP+ + +  A+  D Y++AL LL++ R       +     E+    K + RLKR F +V + A  L+  P DP ANE++GLFYC EK DW  GL +L K+ +                   + +LA AW     +E+D+ +R++F LRGR+WYL ARP LT   +   D++ + I L AD+IV+WN H G   D GT + V+TL   G+ V R+ V +PWK  AP+  +V  PR + D +RVD+T+YRG  GGLGEIEVFDG++N+A+NCS  AS YW+ N  +HP
Sbjct:   42 PGSDPFDYQYSPELANVMSALSVDRYDEALALLSKLRSRTRSSNDPAFRAELEEAQKRIIRLKRAFKRVEDAAFHLRRNPDDPVANEELGLFYCVEKQDWTNGLPLLLKADNRXXXXXXXXXXXXXXXXXEKAKLAVAWLRATAQERDRGVRQSFQLRGRHWYLEARPNLTRDMQISLDEEFDTIPLYADRIVIWNQHNGQAADRGTVQVVVTLLHAGRPVLRKTVALPWKPDAPSSAVVRLPRKKVDAVRVDVTRYRGASGGLGEIEVFDGSVNLAKNCSVQASGYWQQNGQYHP 337          
BLAST of mRNA_M-pyrifera_M_contig82097.19204.1 vs. uniprot
Match: A0A518DYL4_9BACT (Uncharacterized protein n=1 Tax=Lignipirellula cremea TaxID=2528010 RepID=A0A518DYL4_9BACT)

HSP 1 Score: 75.9 bits (185), Expect = 1.440e-11
Identity = 38/111 (34.23%), Postives = 63/111 (56.76%), Query Frame = 1
Query:  253 ETLKTKPGDPEANEKVGLFYCAEKGDWIAGLKMLSKSGDSGLRQAALDDLKQPETPAHRMELADAWWEQAEKEKDQIRKAFLLRGRYWYLSARPGLTELERFERDKQLEQI 585
            E L+  PGDP+AN+ +G++ C  + DW +GL  L+  GD+ +  AA  DL  PE P   +++   W + A+  +D  + A L RG+    SA  G+  L+R +  +++ QI
Sbjct:  672 ERLQASPGDPQANQNLGMYLCFVEHDWASGLPHLAAGGDAAIAAAARQDLDSPEDPQQLIKIGQEWVDLAKGRQDPAKSAMLRRGKVRLESALLGVPALDRQDLQQKIAQI 782          
BLAST of mRNA_M-pyrifera_M_contig82097.19204.1 vs. uniprot
Match: UPI00199428C1 (Uncharacterized protein n=1 Tax=Planctomycetaceae bacterium TaxID=2026779 RepID=UPI00199428C1)

HSP 1 Score: 66.6 bits (161), Expect = 1.220e-8
Identity = 46/151 (30.46%), Postives = 73/151 (48.34%), Query Frame = 1
Query:  148 IAVKVKNQFLLQEILAEIKEVNRLKREFSKVREKAETLKTKPGDPEANEKVGLFYCAEKGDWIAGLKMLSKSGDSGLRQAALDDLK-----QPETPAHRMELADAWWEQAEK-EKDQIRKAFLLRGRYWYLSARPGLTELERFERDKQLEQ 582
            +A ++K+  +L++ +A   E+   K+    V    + L   P DP ANE  G F    K DW  GLK L  + D+ L++ A  D       +P TP    +LAD WW+ A+K      + A  LR   WY  A P L  L + + ++++ +
Sbjct:   40 LARRLKSPDMLKQAVARRGEIVEYKKLVETVAAAEKKLAEAPNDPAANETFGRFLILAKSDWNEGLKRLVLASDATLQKLAQQDTALIEAAKPPTPDAAAQLADGWWDLAQKLSTGNFKSAVKLRAGQWYAFAIPNLKGLPKAKAEQRVTE 190          
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig82097.19204.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 11
Match NameE-valueIdentityDescription
A0A2E7KJ98_9PLAN2.820e-21799.02Uncharacterized protein n=3 Tax=Gimesia TaxID=1649... [more]
A0A517X242_9PLAN4.860e-11956.54Uncharacterized protein n=2 Tax=Gimesia aquarii Ta... [more]
A0A517RIJ5_9PLAN6.890e-10955.45Uncharacterized protein n=1 Tax=Gimesia alba TaxID... [more]
A0A518A979_9PLAN9.580e-10455.93Uncharacterized protein n=4 Tax=Gimesia panareensi... [more]
A0A2E7KA17_9PLAN5.470e-10355.14Uncharacterized protein n=5 Tax=Gimesia TaxID=1649... [more]
A0A517VNM4_9PLAN2.850e-10254.21Uncharacterized protein n=1 Tax=Gimesia aquarii Ta... [more]
A0A517RIL1_9PLAN7.210e-10155.10Uncharacterized protein n=1 Tax=Gimesia alba TaxID... [more]
A0A517ZUE3_9PLAN3.540e-7041.89Uncharacterized protein n=2 Tax=Symmachiella dynat... [more]
A0A518DYL4_9BACT1.440e-1134.23Uncharacterized protein n=1 Tax=Lignipirellula cre... [more]
UPI00199428C11.220e-830.46Uncharacterized protein n=1 Tax=Planctomycetaceae ... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig82097contigM-pyrifera_M_contig82097:2..919 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-19
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Properties
Property NameValue
Taxonomic scopeBacteria
Seed ortholog score60.5
Seed ortholog evalue1.6e-06
Seed eggNOG ortholog1210884.HG799463_gene9935
Hectar predicted targeting categoryother localisation
EggNOG free text desc.anaphase-promoting complex binding
EggNOG OGsCOG2319@1,COG2319@2
COG Functional cat.S
Best tax levelBacteria
Best eggNOG OGNA|NA|NA
Exons1
Model size918
Cds size918
Stop0
Start0
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622816728.1010005-CDS-M-pyrifera_M_contig82097:1..9191622816728.1010005-CDS-M-pyrifera_M_contig82097:1..919Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig82097 2..919 +
1692278143.8395483-CDS-M-pyrifera_M_contig82097:1..9191692278143.8395483-CDS-M-pyrifera_M_contig82097:1..919Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig82097 2..919 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig82097.19204.1prot_M-pyrifera_M_contig82097.19204.1Macrocystis pyrifera P11B4 malepolypeptideM-pyrifera_M_contig82097 2..919 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_M-pyrifera_M_contig82097.19204.1

>prot_M-pyrifera_M_contig82097.19204.1 ID=prot_M-pyrifera_M_contig82097.19204.1|Name=mRNA_M-pyrifera_M_contig82097.19204.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=306bp
RFPPEVFAAPLPQSDPFESEVSPQFSEIREAIDEDDYEQALRLLTEKRVI
AVKVKNQFLLQEILAEIKEVNRLKREFSKVREKAETLKTKPGDPEANEKV
GLFYCAEKGDWIAGLKMLSKSGDSGLRQAALDDLKQPETPAHRMELADAW
WEQAEKEKDQIRKAFLLRGRYWYLSARPGLTELERFERDKQLEQIVLEAD
KIVVWNMHGSTLDHGTDECVLTLFLKGKAVWRQKVVVPWKAKAPAGQIVY
PPRVRFDQIRVDITKYRGFGGGLGEIEVFDGTINVARNCSAVASSYWRSN
RNHHPD
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mRNA from alignment at M-pyrifera_M_contig82097:2..919+

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_M-pyrifera_M_contig82097.19204.1 ID=mRNA_M-pyrifera_M_contig82097.19204.1|Name=mRNA_M-pyrifera_M_contig82097.19204.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=918bp|location=Sequence derived from alignment at M-pyrifera_M_contig82097:2..919+ (Macrocystis pyrifera P11B4 male)
CGCTTTCCTCCAGAAGTTTTCGCTGCTCCTCTCCCTCAGTCAGATCCATT TGAATCTGAAGTATCTCCACAGTTTTCGGAAATCAGAGAGGCGATCGACG AGGATGACTACGAGCAGGCGTTGAGACTGCTTACGGAAAAACGTGTTATT GCAGTGAAGGTGAAAAACCAGTTCTTACTCCAGGAGATTCTGGCGGAAAT CAAAGAGGTGAATCGTCTTAAACGGGAGTTTTCCAAAGTCCGTGAAAAAG CGGAGACTCTGAAAACGAAACCGGGCGATCCCGAGGCAAACGAAAAAGTG GGCCTGTTCTATTGTGCTGAGAAAGGGGATTGGATTGCCGGATTGAAGAT GCTTTCCAAATCAGGGGATTCCGGTCTTCGGCAGGCAGCCCTCGATGATC TCAAACAGCCCGAGACGCCTGCCCATCGGATGGAACTGGCAGATGCCTGG TGGGAACAGGCAGAGAAAGAAAAAGATCAGATTCGCAAGGCTTTCTTGTT ACGTGGACGTTACTGGTACTTGTCAGCACGTCCCGGATTAACAGAATTGG AACGTTTCGAGCGAGATAAACAATTAGAACAGATCGTTTTGGAAGCAGAT AAGATTGTGGTCTGGAATATGCATGGTTCGACTTTGGATCATGGCACAGA CGAATGTGTGCTCACACTTTTCTTGAAAGGGAAAGCCGTCTGGCGTCAGA AAGTAGTGGTTCCCTGGAAAGCCAAAGCACCCGCGGGGCAAATTGTGTAT CCACCCCGCGTCCGTTTCGATCAGATCCGGGTAGATATCACAAAGTATCG TGGGTTTGGTGGCGGGCTGGGTGAAATTGAAGTCTTTGATGGAACGATTA ATGTTGCCCGCAACTGTTCGGCCGTCGCCAGCAGCTATTGGAGATCGAAT CGGAACCATCATCCCGAT
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Coding sequence (CDS) from alignment at M-pyrifera_M_contig82097:2..919+

>mRNA_M-pyrifera_M_contig82097.19204.1 ID=mRNA_M-pyrifera_M_contig82097.19204.1|Name=mRNA_M-pyrifera_M_contig82097.19204.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=1836bp|location=Sequence derived from alignment at M-pyrifera_M_contig82097:2..919+ (Macrocystis pyrifera P11B4 male)
CGCTTTCCTCCAGAAGTTTTCGCTGCTCCTCTCCCTCAGTCAGATCCATT
TGAATCTGAAGTATCTCCACAGTTTTCGGAAATCAGAGAGGCGATCGACG
AGGATGACTACGAGCAGGCGTTGAGACTGCTTACGGAAAAACGTGTTATT
GCAGTGAAGGTGAAAAACCAGTTCTTACTCCAGGAGATTCTGGCGGAAAT
CAAAGAGGTGAATCGTCTTAAACGGGAGTTTTCCAAAGTCCGTGAAAAAG
CGGAGACTCTGAAAACGAAACCGGGCGATCCCGAGGCAAACGAAAAAGTG
GGCCTGTTCTATTGTGCTGAGAAAGGGGATTGGATTGCCGGATTGAAGAT
GCTTTCCAAATCAGGGGATTCCGGTCTTCGGCAGGCAGCCCTCGATGATC
TCAAACAGCCCGAGACGCCTGCCCATCGGATGGAACTGGCAGATGCCTGG
TGGGAACAGGCAGAGAAAGAAAAAGATCAGATTCGCAAGGCTTTCTTGTT
ACGTGGACGTTACTGGTACTTGTCAGCACGTCCCGGATTAACAGAATTGG
AACGTTTCGAGCGAGATAAACAATTAGAACAGATCGTTTTGGAAGCAGAT
AAGATTGTGGTCTGGAATATGCATGGTTCGACTTTGGATCATGGCACAGA
CGAATGTGTGCTCACACTTTTCTTGAAAGGGAAAGCCGTCTGGCGTCAGA
AAGTAGTGGTTCCCTGGAAAGCCAAAGCACCCGCGGGGCAAATTGTGTAT
CCACCCCGCGTCCGTTTCGATCAGATCCGGGTAGATATCACAAAGTATCG
TGGGTTTGGTGGCGGGCTGGGTGAAATTGAAGTCTTTGATGGAACGATTA
ATGTTGCCCGCAACTGTTCGGCCGTCGCCAGCAGCTATTGGAGATCGAAT
CGGAACCATCATCCCGATCGCTTTCCTCCAGAAGTTTTCGCTGCTCCTCT
CCCTCAGTCAGATCCATTTGAATCTGAAGTATCTCCACAGTTTTCGGAAA
TCAGAGAGGCGATCGACGAGGATGACTACGAGCAGGCGTTGAGACTGCTT
ACGGAAAAACGTGTTATTGCAGTGAAGGTGAAAAACCAGTTCTTACTCCA
GGAGATTCTGGCGGAAATCAAAGAGGTGAATCGTCTTAAACGGGAGTTTT
CCAAAGTCCGTGAAAAAGCGGAGACTCTGAAAACGAAACCGGGCGATCCC
GAGGCAAACGAAAAAGTGGGCCTGTTCTATTGTGCTGAGAAAGGGGATTG
GATTGCCGGATTGAAGATGCTTTCCAAATCAGGGGATTCCGGTCTTCGGC
AGGCAGCCCTCGATGATCTCAAACAGCCCGAGACGCCTGCCCATCGGATG
GAACTGGCAGATGCCTGGTGGGAACAGGCAGAGAAAGAAAAAGATCAGAT
TCGCAAGGCTTTCTTGTTACGTGGACGTTACTGGTACTTGTCAGCACGTC
CCGGATTAACAGAATTGGAACGTTTCGAGCGAGATAAACAATTAGAACAG
ATCGTTTTGGAAGCAGATAAGATTGTGGTCTGGAATATGCATGGTTCGAC
TTTGGATCATGGCACAGACGAATGTGTGCTCACACTTTTCTTGAAAGGGA
AAGCCGTCTGGCGTCAGAAAGTAGTGGTTCCCTGGAAAGCCAAAGCACCC
GCGGGGCAAATTGTGTATCCACCCCGCGTCCGTTTCGATCAGATCCGGGT
AGATATCACAAAGTATCGTGGGTTTGGTGGCGGGCTGGGTGAAATTGAAG
TCTTTGATGGAACGATTAATGTTGCCCGCAACTGTTCGGCCGTCGCCAGC
AGCTATTGGAGATCGAATCGGAACCATCATCCCGAT
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