mRNA_M-pyrifera_M_contig82096.19203.1 (mRNA) Macrocystis pyrifera P11B4 male
Overview
Homology
BLAST of mRNA_M-pyrifera_M_contig82096.19203.1 vs. uniprot
Match: A0A7S1C881_9STRA (Hypothetical protein (Fragment) n=1 Tax=Bicosoecida sp. CB-2014 TaxID=1486930 RepID=A0A7S1C881_9STRA) HSP 1 Score: 148 bits (374), Expect = 5.260e-37 Identity = 103/276 (37.32%), Postives = 142/276 (51.45%), Query Frame = 1 Query: 1 RYFHCEEGGGSFLKRKLVDVGVEMVMALQGRYHDS---AGGNDGSVMEAAEGQSVEIEFVGDEKIRSQQRLERLRTASLVRTRVSWVSVEA-LRAQAPLLGDLDLRDNLLSRWEDVGHLASALPHLTHLNIGNNKMRPFLPSSHLPLL-HFPSLRVLVLSATGISFPHAAQIAAQLPTLEELHICDNNLDTLQIHEDGEEGXXXXXXXXXXXXXEEVHLTAESVATC--FPTLHTLSLNGNKFSDWKALWGLRFLRRLRRLLLNDNPLPSISYAPS 807 RYF G GSFLK LVD G V AL RY S A G G+V E A G+ +E+EFVG+++IR +QRL R + +L RV+ + + A P + DLDLRDNLL W + L LP L LN+ N+ P + L +F +LRVLVLS TG + A +A +PTLEELH+C+N + +L + + +S+A +L L+L+ N S W+ +W L L +L +LLL N L + Y PS Sbjct: 82 RYFTTSPGRGSFLKVALVDAGTSFVAALIDRYEGSTLDAVGGAGTV-ETASGRDLEVEFVGEDQIRGKQRLARNKNVALRGCRVATFDGDGKIAATCPNIEDLDLRDNLLYDWASLAPLGQQLPRLAVLNVSGNRFAPAAEGAIASLAGNFNALRVLVLSRTGTPWRDAVMVAQAMPTLEELHVCENGVVSL--------APVGASSAAEESKGNDGGESVDSLAMVEGLSSLKVLNLSDNSVSSWREVWRLSQLPKLEQLLLEGNALTDVRYWPS 348
BLAST of mRNA_M-pyrifera_M_contig82096.19203.1 vs. uniprot
Match: A0A250XM65_9CHLO (CAP-Gly domain-containing protein n=1 Tax=Chlamydomonas eustigma TaxID=1157962 RepID=A0A250XM65_9CHLO) HSP 1 Score: 111 bits (278), Expect = 4.700e-24 Identity = 92/276 (33.33%), Postives = 138/276 (50.00%), Query Frame = 1 Query: 1 RYFHCEEG--GGSFLKRKLVDVGVEMVMALQGRY---HDSAGGNDGSVM--EAAEGQSVEIEFVGDEKIRSQQ-RLERLRTASLVRTRVSWVSVEALRAQA-PLLGDLDLRDNLLSRWEDVGHLASALPHLTHLNIGNNKMRPFLPSS-HLPLLHFPSLRVLVLSATGISFPHAAQIAAQLPTLEELHICDNNLDTLQIHEDGEEGXXXXXXXXXXXXXEEVHLTAESVATCFPTLHTLSLNGNKFSDWKALWGLRFLRRLRRLLLNDNPLPSISY 798 +YF C+ G GSF++ + V G ++ A+ RY G D S M A+ + V I VG+E IR++Q +++ L +A +V VS + L + P L +LDL NLLS WE V HL +ALP + LN+ +N++ +P+S + LR LVL+ + + + A LP L+ELH+C NN+ +L E+ + + HL AT F L L+L N S WK + L L L RL L++NPL + Y Sbjct: 51 KYFECDSGLNAGSFIRIEKVSFGCSLLEAVIARYTGQKGELGDVDQSEMYVHTAQNRKVNIHLVGEELIRTRQSQIQHLTSARVVGASVSNMDESLLIGSSLPSLTELDLTCNLLSSWEAVHHLCTALPKIQILNLSDNRIA--IPASIAVDQQQLIGLRALVLNDCMMMWRQVLTLGAVLPNLDELHLCGNNIKSLISSENERDS-------------DIYHL-----ATTFSKLKLLNLEDNLISTWKDVQPLAALPNLSRLHLSNNPLSEVDY 306
BLAST of mRNA_M-pyrifera_M_contig82096.19203.1 vs. uniprot
Match: TBCE_XENLA (Tubulin-specific chaperone E n=1 Tax=Xenopus laevis TaxID=8355 RepID=TBCE_XENLA) HSP 1 Score: 99.8 bits (247), Expect = 5.140e-20 Identity = 80/269 (29.74%), Postives = 128/269 (47.58%), Query Frame = 1 Query: 1 RYFHCEEG-GGSFLKRKLVDVGVEMVMALQGRYHDSAGGNDGSVMEAAEGQSVEIEFVGDEKIRSQQ-RLERLRTASLVRTRVSWVSVEA-LRAQAPLLGDLDLRDNLLSRWEDVGHLASALPHLTHLNIGNNKMRPFLPSSHLPLLHFPSLRVLVLSATGISFPHAAQIAAQLPTLEELHICDNNLDTLQIHEDGEEGXXXXXXXXXXXXXEEVHLTAESVATCFPTLHTLSLNGNKFSDWKALWGLRFLRRLRRLLLNDNPLPSISY 798 +YF C GGSF++ K + GV+ + AL+ RY + N+ V+ G+ +E VG E I+ +Q +L +L+ SL VS + + P + DL NL S WE + H++S L +LT L++ NK+ P S L F +L+VL L+ TG+ + Q A+ P LEELH+ N++ L E L L ++ NK D L + FL RL+++++++N + SIS+ Sbjct: 57 KYFTCSHPTGGSFIRLKKANFGVDFLAALRKRYGLKSEQNEELVI----GKKT-VELVGFESIQEEQSKLNKLKDVSLRECAVSNAGEKGQICHSCPNIMTADLSKNLFSSWESLAHISSQLENLTSLDLSENKLNPSSNPSSLAT-SFCNLKVLSLNRTGMKWNEILQCASMWPALEELHLVSNDISLL-----------------------------EQPVNNLQNLTILDISNNKIVDGNQLHTIAFLPRLKQVIVSNNIISSISF 290
BLAST of mRNA_M-pyrifera_M_contig82096.19203.1 vs. uniprot
Match: A0A8B8A551_ACAPL (Tubulin-specific chaperone E n=1 Tax=Acanthaster planci TaxID=133434 RepID=A0A8B8A551_ACAPL) HSP 1 Score: 98.2 bits (243), Expect = 1.680e-19 Identity = 78/265 (29.43%), Postives = 123/265 (46.42%), Query Frame = 1 Query: 25 GGSFLKRKLVDVGVEMVMALQGRY-HDSAGGNDGSVME----AAEGQSVEIEFVGDEKI-RSQQRLERLRTASLVRTRVSWVSVEALRAQAPLLGDLDLRDNLLSRWEDVGHLASALPHLTHLNIGNNKMRPFLPSSHLPLLH-FPSLRVLVLSATGISFPHAAQIAAQLPTLEELHICDNNLDTLQIHEDGEEGXXXXXXXXXXXXXEEVHLTAESVATCFPTLHTLSLNGNKFSDWKALWGLRFLRRLRRLLLNDNPLPSISY 798 GGSF++ K D GV+ + AL+ RY D A D E A Q +E VG K+ + Q L+ L T++S + L + P + +LDL NLLS W+ V L S L L L++ N+++ +PS+ L F +L+ L ++ +++P A+ A P+L+ LH+C N + ++ G F TL L+L GN+ S+W+ + L RL L+LN N L S+ + Sbjct: 43 GGSFIRPKKADFGVDFLAALRDRYVPDDAQTADIDEKELFVRGANNQITMVEVVGAVKVAKEQSTFASLKDVVLRDTKISRIGTTQLEKETPGITELDLSRNLLSSWQVVSELTSQLRKLKGLSVSENRLQ--IPSNPSSLASSFSNLQELFINYMNLTWPMVARCAPMWPSLKNLHLCFNRISSIDRLPPG----------------------------TFETLELLNLEGNELSEWQHVXXXXXLPRLDTLILNSNSLTSVLF 277
BLAST of mRNA_M-pyrifera_M_contig82096.19203.1 vs. uniprot
Match: A0A671G4Q5_RHIFE (Tubulin-specific chaperone E n=9 Tax=Microchiroptera TaxID=30560 RepID=A0A671G4Q5_RHIFE) HSP 1 Score: 97.1 bits (240), Expect = 4.480e-19 Identity = 82/272 (30.15%), Postives = 129/272 (47.43%), Query Frame = 1 Query: 4 YFHCEEG-GGSFLKRKLVDVGVEMVMALQGRYHDSAGGNDGSVMEAAEGQSVEIEFVG-DEKIRSQQRLERLRTASLVRTRVSWVSVEALRAQA-PLLGDLDLRDNLLSRWEDVGHLASALPHLTHLNIGNNKMRPFLPSSHLPLL-HFPSLRVLVLSATGISFPHAAQIAAQLPTLEELHICDNNLDTLQIHEDGEEGXXXXXXXXXXXXXEEVHLTAESVATCFPTLHTLSLNGNKFSDWKALWGLRFLRRLRRLLLNDNPLPSISYAPS 807 YF C GGSF++ V+ GV+ + A++ RY G + + + +E +G D I+ Q +L +L+ SL VS + A+A P + ++D+ NLLS W++V +A L HL LN+ NK+R PS L F +L+VLVLS TGI++ Q AA P LEEL++ N++ +E TL L L+ N+ D L+ + +L RL +L+L+D + S+ + S Sbjct: 58 YFKCRHPTGGSFVRPNKVNFGVDFLTAIKKRYVLEDGPEEDGKEQIVTIGNKPVETIGFDSIIKQQSQLSKLQEISLRNCAVSCAGDKGGIAKACPNIRNVDVSRNLLSSWDEVIDIADQLTHLEVLNLSENKLR--FPSDSLSSTGRFTTLKVLVLSRTGITWAEVLQCAAGWPVLEELYLESNSISI-----------------------------SERPIDILQTLKLLDLSSNRLIDENQLFLIAYLPRLEQLILSDIGISSLHFPDS 298
BLAST of mRNA_M-pyrifera_M_contig82096.19203.1 vs. uniprot
Match: A0A834X4T7_9FABA (Tubulin-folding cofactor E isoform X1 n=1 Tax=Senna tora TaxID=362788 RepID=A0A834X4T7_9FABA) HSP 1 Score: 94.4 bits (233), Expect = 3.860e-18 Identity = 69/194 (35.57%), Postives = 104/194 (53.61%), Query Frame = 1 Query: 1 RYFHCE-EGGGSFLKRKLVDVGVEMVMALQGRYHDSAGGNDGSVME--AAEGQSVEIEFVGDEKIRSQ-QRLERLRTASLVRTRVSWVSVEALRA------QAPLLGDLDLRDNLLSRWEDVGHLASALPHLTHLNIGNNKMRPFLPSSHLPLLHFPSLRVLVLSATGISFPHAAQIAAQLPTLEELHICDNNL 552 RYFH + E GSF++ + + G+ ++ AL RY + + M +A V I+ VG +KI+ + R E L +ASL S++ V +L + + P L +LDL NL+S W DV + LP L LN+ NN M P+ S LP L ++RVLVL+ T I + + LPT+EELH+ N++ Sbjct: 62 RYFHAKSERSGSFVRAQNLSQGISLLEALGIRYRGDSTKEEEDEMYVLSASNNRVSIQLVGKDKIQDKLSRFEELTSASL-----SYMGVSSLGSPCQINNEVPNLKELDLTGNLISEWTDVSTICEQLPLLGTLNLSNNLMSPY--KSELPSLK--NIRVLVLNHTTIDWEQVELLGLSLPTVEELHLIGNHI 246
BLAST of mRNA_M-pyrifera_M_contig82096.19203.1 vs. uniprot
Match: TBCE_BOVIN (Tubulin-specific chaperone E n=7 Tax=Bovidae TaxID=9895 RepID=TBCE_BOVIN) HSP 1 Score: 92.8 bits (229), Expect = 1.290e-17 Identity = 77/269 (28.62%), Postives = 127/269 (47.21%), Query Frame = 1 Query: 4 YFHCEEG-GGSFLKRKLVDVGVEMVMALQGRYHDSAGGNDGSVMEAAEGQSVEIEFVG-DEKIRSQQRLERLRTASLVRTRVSWVSVEALRAQA-PLLGDLDLRDNLLSRWEDVGHLASALPHLTHLNIGNNKMRPFLPSSH-LPLLHFPSLRVLVLSATGISFPHAAQIAAQLPTLEELHICDNNLDTLQIHEDGEEGXXXXXXXXXXXXXEEVHLTAESVATCFPTLHTLSLNGNKFSDWKALWGLRFLRRLRRLLLNDNPLPSISY 798 YF C GSF++ V+ GV+ + A++ RY + + + +E +G D I+ Q +L +L+ SL V+ + A+A P + +DL NLLS WE+V +A L HL LN+ NK+ PSS P FP+L+VLVL+ TG+++ + A+ P LE+L++ NN+ + +E T+ L L+ N+ D L+ + +L RL +L+L+D + SI + Sbjct: 58 YFKCRHPTAGSFIRPHKVNFGVDFLTAIKNRYVLEDEPKEEETEQIVIIGNKPVETIGFDSVIKQQSQLSKLQDVSLRNCAVNGAGDKGEIAKACPNIRSIDLSKNLLSSWEEVIDIADQLKHLEVLNLSENKLTS--PSSSPSPTGTFPTLKVLVLNRTGVTWAEVLRCASGWPVLEKLYLESNNI-----------------------------IISERPTDVLQTVKLLDLSSNQLIDENQLFLIAYLPRLEQLILSDIGISSIHF 295
BLAST of mRNA_M-pyrifera_M_contig82096.19203.1 vs. uniprot
Match: UPI0018D880CC (tubulin-specific chaperone E-like n=1 Tax=Patiria miniata TaxID=46514 RepID=UPI0018D880CC) HSP 1 Score: 92.4 bits (228), Expect = 1.800e-17 Identity = 77/265 (29.06%), Postives = 119/265 (44.91%), Query Frame = 1 Query: 25 GGSFLKRKLVDVGVEMVMALQGRY-HDSAGGNDGSVME----AAEGQSVEIEFVGDEKI-RSQQRLERLRTASLVRTRVSWVSVEALRAQAPLLGDLDLRDNLLSRWEDVGHLASALPHLTHLNIGNNKMR-PFLPSSHLPLLHFPSLRVLVLSATGISFPHAAQIAAQLPTLEELHICDNNLDTLQIHEDGEEGXXXXXXXXXXXXXEEVHLTAESVATCFPTLHTLSLNGNKFSDWKALWGLRFLRRLRRLLLNDNPLPSISY 798 GGSF++ K D GV+ + AL+ RY D+A D E A Q +E VG K+ + Q LR L R++ V L + P + +L L NLL W+ V L L L L++ N+++ P PSS F L+ L ++ +++ A+ A P+L++LH+C N + ++ G F TL L+L GN+ S+W+ + L L RL L+LN N L S+ + Sbjct: 75 GGSFIRPKKADFGVDFLSALRDRYVPDNAHTADIDEKELFIRGANNQITMVEMVGAVKVAKEQSTFASLRDVVLRDMRINQVGTTQLEQETPGIKELYLSKNLLPSWQAVSELTGQLKQLKRLSLSENRLQIPPTPSSLASC--FSRLQELSINYMNLTWAMVAECAPMWPSLQKLHVCFNQISSIDRLAPG----------------------------TFETLQLLNLEGNQISEWQHIMCLSHLPRLDTLILNSNSLTSLMF 309
BLAST of mRNA_M-pyrifera_M_contig82096.19203.1 vs. uniprot
Match: A0A7J7RFR5_RHIFE (Tubulin-specific chaperone E n=1 Tax=Rhinolophus ferrumequinum TaxID=59479 RepID=A0A7J7RFR5_RHIFE) HSP 1 Score: 89.0 bits (219), Expect = 2.790e-17 Identity = 66/187 (35.29%), Postives = 101/187 (54.01%), Query Frame = 1 Query: 4 YFHCEEG-GGSFLKRKLVDVGVEMVMALQGRYHDSAGGNDGSVMEAAEGQSVEIEFVG-DEKIRSQQRLERLRTASLVRTRVSWVSVEALRAQA-PLLGDLDLRDNLLSRWEDVGHLASALPHLTHLNIGNNKMRPFLPSSHLPLL-HFPSLRVLVLSATGISFPHAAQIAAQLPTLEELHICDNNL 552 YF C GGSF++ V+ GV+ + A++ RY G + + + +E +G D I+ Q +L +L+ SL VS + A+A P + ++D+ NLLS W++V +A L HL LN+ NK+R PS L F +L+VLVLS TGI++ Q AA P LEEL++ N++ Sbjct: 58 YFKCRHPTGGSFVRPNKVNFGVDFLTAIKKRYVLEDGPEEDGKEQIVTIGNKPVETIGFDSIIKQQSQLSKLQEISLRNCAVSCAGDKGGIAKACPNIRNVDVSRNLLSSWDEVIDIADQLTHLEVLNLSENKLR--FPSDSLSSTGRFTTLKVLVLSRTGITWAEVLQCAAGWPVLEELYLESNSI 242
BLAST of mRNA_M-pyrifera_M_contig82096.19203.1 vs. uniprot
Match: A0A2B4SAM5_STYPI (Tubulin-specific chaperone E n=2 Tax=Pocilloporidae TaxID=46729 RepID=A0A2B4SAM5_STYPI) HSP 1 Score: 90.9 bits (224), Expect = 5.980e-17 Identity = 81/279 (29.03%), Postives = 129/279 (46.24%), Query Frame = 1 Query: 1 RYFHCE-EGGGSFLKRKLVDVGVEMVMALQGRYHDSAGGNDGSVMEAAEGQSVE--IEFVGDEKIRSQQ-RLERLRTASLVRTRVSWVSVEA-LRAQAPLLGDLDLRDNLLSRWEDVGHLASALPHLTHLNIGNNKMR-PFLPSSHLPLLHFPSLRVLVLSATGISFPHAAQIAAQLPTLEELHICDNNLDTLQIHEDGEEGXXXXXXXXXXXXXEEVHLTAESVATCFPTLHTLSLNGNKFSDWKALWGL-RFLRRLRRLLLNDNPLPSISYAPSLAD 816 +YF C GSF++ K V G+ ++ AL+ +Y G + M G++ + +E VG + I+ +Q + L SL VS E APL+ +LDL LLS W DV + L L L++ N ++ P P +P F ++ V+ L+ + + I + +P+L ELHIC N L++L+ + + L A + L+L GNK SDWK++ L L RL+ L+LNDN + S+ + D Sbjct: 53 KYFECRYPKSGSFVRPKKVYFGISIIDALKEQYGLGGDGINPEDMYVMSGKNKKKPVEMVGTDSIQEKQSNYKELTVVSLRGMAVSGPDKEREFYTVAPLVSELDLSSTLLSSWNDVASVTRNLHQLQTLHLNENFLKLPQDPKQLMP--SFSTVSVMFLNRMRLQWNEVEVIVSMMPSLTELHICHNCLNSLRENN-----------------GQLTQLRA------LGNIELLNLEGNKLSDWKSILRLGHLLPRLKCLILNDNGIKSVELGNKVQD 306 The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig82096.19203.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_M-pyrifera_M_contig82096.19203.1 >prot_M-pyrifera_M_contig82096.19203.1 ID=prot_M-pyrifera_M_contig82096.19203.1|Name=mRNA_M-pyrifera_M_contig82096.19203.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=280bp RYFHCEEGGGSFLKRKLVDVGVEMVMALQGRYHDSAGGNDGSVMEAAEGQback to top mRNA from alignment at M-pyrifera_M_contig82096:4..843+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_M-pyrifera_M_contig82096.19203.1 ID=mRNA_M-pyrifera_M_contig82096.19203.1|Name=mRNA_M-pyrifera_M_contig82096.19203.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=840bp|location=Sequence derived from alignment at M-pyrifera_M_contig82096:4..843+ (Macrocystis pyrifera P11B4 male)back to top Coding sequence (CDS) from alignment at M-pyrifera_M_contig82096:4..843+ >mRNA_M-pyrifera_M_contig82096.19203.1 ID=mRNA_M-pyrifera_M_contig82096.19203.1|Name=mRNA_M-pyrifera_M_contig82096.19203.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=1680bp|location=Sequence derived from alignment at M-pyrifera_M_contig82096:4..843+ (Macrocystis pyrifera P11B4 male)back to top |