mRNA_M-pyrifera_M_contig82051.19195.1 (mRNA) Macrocystis pyrifera P11B4 male
Overview
Homology
BLAST of mRNA_M-pyrifera_M_contig82051.19195.1 vs. uniprot
Match: A0A5A8DAE2_CAFRO (DNA polymerase n=2 Tax=Cafeteria roenbergensis TaxID=33653 RepID=A0A5A8DAE2_CAFRO) HSP 1 Score: 176 bits (446), Expect = 8.250e-48 Identity = 96/180 (53.33%), Postives = 121/180 (67.22%), Query Frame = 1 Query: 1 IDMYDGLPLASNPCEGKTVPGSPNAPVPVIRLYGCTPEGQSVLCHVHGFTPYFYCSAPPDFNEA-NIAEFQAALDAQLRESRTGRASFGGHSIRQHVMAVVPVEKT-NLYGYQFGRKATFLQIYVAMPNLVTTARTILTAGFRFGSQTRPLAYQTYEAKCPFVLRFMIDNDIVGCNWLEL 534 IDM DG PL S+P KT+PGS PVPV+RLYG T G SV+ HVHGFTPYF+C++PP F+ A + A FQA+L+A+LR + TGR + +I + VMAV + ++ G+ ATFL++YVA P LVT RTIL G R GS L YQ +EA PF LRFMIDN+I G N+LEL Sbjct: 75 IDMTDGDPLPSHPDPSKTLPGSRVGPVPVLRLYGVTDGGHSVMAHVHGFTPYFFCNSPPGFDAARDCAGFQASLEARLRSAVTGRDA----AISRLVMAVQAEDGLQSIMGFHGDETATFLRVYVAAPTLVTKCRTILERGMRLGSGPE-LCYQCFEANTPFTLRFMIDNNITGSNYLEL 249
BLAST of mRNA_M-pyrifera_M_contig82051.19195.1 vs. uniprot
Match: A0A482RF44_9ARCH (DNA_pol_B_exo1 domain-containing protein (Fragment) n=1 Tax=archaeon TaxID=1906665 RepID=A0A482RF44_9ARCH) HSP 1 Score: 162 bits (409), Expect = 1.340e-44 Identity = 85/179 (47.49%), Postives = 111/179 (62.01%), Query Frame = 1 Query: 1 IDMYDGLPLASNPCEGKTVPGSPNAPVPVIRLYGCTPEGQSVLCHVHGFTPYFYCSAPPDFNEANIAEFQAALDAQLR--ESRTGRASFGGHSIRQHVMAVVPVEKTNLYGYQFGRKATFLQIYVAMPNLVTTARTILTAGFRFGSQTRPLAYQTYEAKCPFVLRFMIDNDIVGCNWLE 531 +DMYDG PLA NP G +PG+ + VP+IR++G T EG SV HVHGFTPYF+ + P E ++ F+AAL+AQLR + R A H + +VP +K +L GY GRK + L+IY MP +V TA+ IL GF FG Y +EA PF+LR+MIDN+I G NWLE Sbjct: 20 MDMYDGEPLAKNPRSGLAMPGARSGTVPIIRVFGVTQEGHSVCMHVHGFTPYFWAAPPAGMTERDVPAFRAALEAQLRAVKERARVADAIPH------VELVP-DKQSLLGYHHGRKQSMLRIYTGMPTMVPTAKGILERGFSFGGGAGR-EYMCFEANVPFILRYMIDNNITGGNWLE 190
BLAST of mRNA_M-pyrifera_M_contig82051.19195.1 vs. uniprot
Match: A0A0P1AFV1_PLAHL (DNA polymerase n=9 Tax=Peronosporaceae TaxID=4777 RepID=A0A0P1AFV1_PLAHL) HSP 1 Score: 158 bits (400), Expect = 1.280e-41 Identity = 87/183 (47.54%), Postives = 109/183 (59.56%), Query Frame = 1 Query: 1 IDMYDGLPLASNPCEGKTVPG-----SPNAPVPVIRLYGCTPEGQSVLCHVHGFTPYFYCSAPPDFNEANIAEFQAALDAQLRESRTGRASFGGHSIRQHVMAVVPVEKTNLYGYQFGRKATFLQIYVAMPNLVTTARTILTAGFRF-GSQTRPLAYQTYEAKCPFVLRFMIDNDIVGCNWLE 531 IDMYDG PL +NP +G VPG N +IRL+G T EG SVL HVHG PYFY S P +FNE+ E + ALDA + + R G + R + VV +K ++YGYQF RK T +IY++MPN V R+ L G G R YQTYE+ PF+LRFMID +I GCNW+E Sbjct: 72 IDMYDGPPLKTNPKKGSVVPGVSASGDSNQNAAIIRLFGVTIEGHSVLMHVHGVLPYFYASCPENFNESKCGEVRLALDAAVSQ----RDRDSGSTARVVGVQVVR-DKMSIYGYQFDRKTTLFKIYLSMPNYVPKLRSALEGGLTLPGCDFRN--YQTYESNVPFILRFMIDEEISGCNWVE 247
BLAST of mRNA_M-pyrifera_M_contig82051.19195.1 vs. uniprot
Match: A0A421FHY3_9STRA (DNA polymerase n=3 Tax=Phytophthora kernoviae TaxID=325452 RepID=A0A421FHY3_9STRA) HSP 1 Score: 155 bits (392), Expect = 1.520e-40 Identity = 85/193 (44.04%), Postives = 108/193 (55.96%), Query Frame = 1 Query: 1 IDMYDGLPLASNPCEGKTVPGSPNAP-------------VPVIRLYGCTPEGQSVLCHVHGFTPYFYCSAPPDFNEANIAEFQAALDAQLRESRTGRASFGGHSIRQHVMAVVPV--EKTNLYGYQFGRKATFLQIYVAMPNLVTTARTILTAGFRF-GSQTRPLAYQTYEAKCPFVLRFMIDNDIVGCNWLE 531 IDMYDG PL NP +G VPG +A +IRLYG T EG SVL HVHG PYFYC+ P F+E E + ALDA + + G GHS + V V +K ++YGYQF + T ++Y++MPN V R+ L G G R +YQTYE+ PF+LRFMID +I GCNW+E Sbjct: 74 IDMYDGPPLQQNPKKGDKVPGLSSASPSNGASSSGGHQSAAIIRLYGVTMEGHSVLMHVHGVLPYFYCACPDQFDEKRCGEVREALDAAVAQRERG-----GHSSNASRVVGVQVVRDKMSIYGYQFDKVTTLWKVYLSMPNYVPKLRSALEGGLTLPGCDFR--SYQTYESNVPFILRFMIDEEIQGCNWVE 259
BLAST of mRNA_M-pyrifera_M_contig82051.19195.1 vs. uniprot
Match: H3GAM4_PHYRM (DNA polymerase n=3 Tax=Phytophthora TaxID=4783 RepID=H3GAM4_PHYRM) HSP 1 Score: 155 bits (392), Expect = 1.530e-40 Identity = 82/183 (44.81%), Postives = 110/183 (60.11%), Query Frame = 1 Query: 1 IDMYDGLPLASNPCEGKTVPG-----SPNAPVPVIRLYGCTPEGQSVLCHVHGFTPYFYCSAPPDFNEANIAEFQAALDAQLRESRTGRASFGGHSIRQHVMAVVPVEKTNLYGYQFGRKATFLQIYVAMPNLVTTARTILTAGFRF-GSQTRPLAYQTYEAKCPFVLRFMIDNDIVGCNWLE 531 IDMYDG PL NP +G VPG +IRLYG + +G SVL HVHG PYFYC+ P DF+E + +AALDA + ++ R S G + V V ++ ++YGYQF R T +++++MP+ V R+ L AG G + R +YQTYE+ PF+LRFMID DI GCNW+E Sbjct: 140 IDMYDGPPLRQNPKKGAAVPGLKASGESGQSAAIIRLYGVSAQGHSVLMHVHGVLPYFYCACPDDFDEGRCGDVRAALDAAV--AQRDRNSGGNARV---VGVQVVRDRMSIYGYQFDRYTTLFKVFLSMPSYVPKLRSALEAGLTLPGCEFR--SYQTYESNVPFILRFMIDEDIKGCNWVE 315
BLAST of mRNA_M-pyrifera_M_contig82051.19195.1 vs. uniprot
Match: A0A401NGF2_SCYTO (Uncharacterized protein n=1 Tax=Scyliorhinus torazame TaxID=75743 RepID=A0A401NGF2_SCYTO) HSP 1 Score: 151 bits (382), Expect = 3.670e-40 Identity = 75/161 (46.58%), Postives = 103/161 (63.98%), Query Frame = 1 Query: 55 VPGSPNAPVPVIRLYGCTPEGQSVLCHVHGFTPYFYCSAPPDFNEANIAEFQAALDA-QLRESRTGRASFGGHSIRQHVMAVVPVEKTNLYGYQFGRKATFLQIYVAMPNLVTTARTILTAGFRFGSQTRPLAYQTYEAKCPFVLRFMIDNDIVGCNWLEL 534 +PG+ PVPV R++G T EG SV CHVHGF PYFY APP F ++ +FQ L+ +++ R+ + + I Q V+AV K N+YGY K FL+I +A+P L+ A+ +L GFRFGS T YQ+YEA F +RFM+D+D+VGCNW+EL Sbjct: 111 MPGNKQGPVPVTRMFGITMEGNSVCCHVHGFMPYFYVKAPPGFGSEHLHDFQRELNVIVIKDMRSNKGN-----IMQAVLAVDICLKENMYGYGGNTKMPFLKITMALPRLIAPAKRLLEQGFRFGS-TPVCNYQSYEANIDFEIRFMVDSDVVGCNWIEL 265
BLAST of mRNA_M-pyrifera_M_contig82051.19195.1 vs. uniprot
Match: A0A8K1C2T3_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1C2T3_PYTOL) HSP 1 Score: 154 bits (388), Expect = 5.250e-40 Identity = 80/184 (43.48%), Postives = 107/184 (58.15%), Query Frame = 1 Query: 1 IDMYDGLPLASNPCEGKTVPG------SPNAPVPVIRLYGCTPEGQSVLCHVHGFTPYFYCSAPPDFNEANIAEFQAALDAQLRESRTGRASFGGHSIRQHVMAVVPVEKTNLYGYQFGRKATFLQIYVAMPNLVTTARTILTAGFRF-GSQTRPLAYQTYEAKCPFVLRFMIDNDIVGCNWLE 531 IDMYDG PLA NP G+ VPG N ++RLYG T +G SV+ HVHGF PYFY + P +F E+ E + +L+A L + RA + + V +K ++YGYQF R ++Y++MPN V R++L G G + R YQTYE+ PF+LRFMID +I GCNWLE Sbjct: 79 IDMYDGPPLARNPKAGEPVPGLVASSTGGNQNAAIVRLYGVTEDGNSVMMHVHGFLPYFYVACPDNFEESRCGEIRMSLEAALSQRDRDRAD-----MTRIVGVQFVTDKMSIYGYQFDRPVKLWKVYLSMPNYVPKLRSLLEGGLTLPGIEHR--TYQTYESNVPFILRFMIDQNISGCNWLE 255
BLAST of mRNA_M-pyrifera_M_contig82051.19195.1 vs. uniprot
Match: UPI0009A33C64 (DNA polymerase delta catalytic subunit n=1 Tax=Rhincodon typus TaxID=259920 RepID=UPI0009A33C64) HSP 1 Score: 153 bits (387), Expect = 6.620e-40 Identity = 76/161 (47.20%), Postives = 103/161 (63.98%), Query Frame = 1 Query: 55 VPGSPNAPVPVIRLYGCTPEGQSVLCHVHGFTPYFYCSAPPDFNEANIAEFQAALDAQ-LRESRTGRASFGGHSIRQHVMAVVPVEKTNLYGYQFGRKATFLQIYVAMPNLVTTARTILTAGFRFGSQTRPLAYQTYEAKCPFVLRFMIDNDIVGCNWLEL 534 +PGS PVPV R++G T EG SV CHVHGF PYFY APP F ++ +FQ L+ +++ R+ + +I Q V+AV K N+YGY K FL+I +A+P L+ A+ +L GFRFGS T YQ+YEA F +RFM+D+D+VGCNW+EL Sbjct: 6 MPGSKQGPVPVTRMFGITMEGNSVCCHVHGFMPYFYVKAPPGFGSEHLHDFQRELNTTVIKDMRSNK-----DNISQAVLAVDICMKENMYGYGGNTKTPFLKITMALPRLIAPAKRLLEQGFRFGS-TPMCNYQSYEANIDFEIRFMVDSDVVGCNWIEL 160
BLAST of mRNA_M-pyrifera_M_contig82051.19195.1 vs. uniprot
Match: A0A2R5G2Q3_9STRA (DNA polymerase n=1 Tax=Hondaea fermentalgiana TaxID=2315210 RepID=A0A2R5G2Q3_9STRA) HSP 1 Score: 153 bits (387), Expect = 7.180e-40 Identity = 81/179 (45.25%), Postives = 113/179 (63.13%), Query Frame = 1 Query: 1 IDMYDGLPLASNPCEGKTVPGSPNAPVPVIRLYGCTPEGQSVLCHVHGFTPYFYCSAPPD-FNEANIAEFQAALDAQLRESRTGRASFGGHSIRQHVMAVVPVEKTNLYGYQFGRKATFLQIYVAMPNLVTTARTILTAGFRFGSQTRPLAYQTYEAKCPFVLRFMIDNDIVGCNWLEL 534 +DMY G PL +P G+ VPG + VP+IR+YG T +GQSV+CHV+G TPYFY P D F E+ ++ F+ ALDA++ + R + G V+AVV EK ++ GY G K +LQI +++PNLV A+++L GF + TYE+ PFVLR+M+DNDIVG NWL + Sbjct: 113 MDMYSGDPLREHPVPGEHVPGLRSGEVPIIRVYGVTDKGQSVMCHVYGVTPYFYTDIPGDAFGESELSRFREALDARVCSA--ARINQGSA-----VVAVVIREKMSIMGYCGGAKKRYLQIMMSLPNLVPKAKSVLQNGFACPGFPEK-QFMTYESNVPFVLRYMVDNDIVGSNWLTI 283
BLAST of mRNA_M-pyrifera_M_contig82051.19195.1 vs. uniprot
Match: F0Y3Y2_AURAN (DNA polymerase n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0Y3Y2_AURAN) HSP 1 Score: 153 bits (386), Expect = 9.700e-40 Identity = 86/183 (46.99%), Postives = 114/183 (62.30%), Query Frame = 1 Query: 1 IDMYDGLPLASNPCEGKTVPGSPNAPVPVIRLYGCTPEGQSVLCHVHGFTPYFYCSAPPDFNEA---NIAEFQAALDAQLRESRTGRASFG-GHSIRQHVMAVVPV-EKTNLYGYQ-FGRKATFLQIYVAMPNLVTTARTILTAGFRFGSQTRPLAYQTYEAKCPFVLRFMIDNDIVGCNWLE 531 IDMY G PLA++P +G+ VPGS N PVPV+RLYG T +G SV H HGFTPY + SAP F+E+ N+A+ Q ALD LR+ R S G + Q V+ V V +K ++ GYQ G +A F +IYVA+P + + +L G QT+E+ PF+LRFMIDN+I GCNW+E Sbjct: 30 IDMYTGDPLATHPRQGQRVPGSRNRPVPVVRLYGVTGDGASVCAHCHGFTPYCFSSAPLAFDESDAGNVAKLQQALDGALRQ----RCSRGQDRACAQLVLGVEVVRDKRSIMGYQPDGARACFFKIYVALPTQIPALKKVLQDGVNVPGVGHS-QLQTFESNVPFILRFMIDNEIQGCNWVE 207 The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig82051.19195.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_M-pyrifera_M_contig82051.19195.1 >prot_M-pyrifera_M_contig82051.19195.1 ID=prot_M-pyrifera_M_contig82051.19195.1|Name=mRNA_M-pyrifera_M_contig82051.19195.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=176bp MYDGLPLASNPCEGKTVPGSPNAPVPVIRLYGCTPEGQSVLCHVHGFTPYback to top mRNA from alignment at M-pyrifera_M_contig82051:98..631- Legend: UTRCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_M-pyrifera_M_contig82051.19195.1 ID=mRNA_M-pyrifera_M_contig82051.19195.1|Name=mRNA_M-pyrifera_M_contig82051.19195.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=534bp|location=Sequence derived from alignment at M-pyrifera_M_contig82051:98..631- (Macrocystis pyrifera P11B4 male)back to top Coding sequence (CDS) from alignment at M-pyrifera_M_contig82051:98..631- >mRNA_M-pyrifera_M_contig82051.19195.1 ID=mRNA_M-pyrifera_M_contig82051.19195.1|Name=mRNA_M-pyrifera_M_contig82051.19195.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=1056bp|location=Sequence derived from alignment at M-pyrifera_M_contig82051:98..631- (Macrocystis pyrifera P11B4 male)back to top |