mRNA_M-pyrifera_M_contig82038.19191.1 (mRNA) Macrocystis pyrifera P11B4 male
Overview
Homology
BLAST of mRNA_M-pyrifera_M_contig82038.19191.1 vs. uniprot
Match: M2XSJ9_GALSU (Mitochondrial Rho GTPase n=1 Tax=Galdieria sulphuraria TaxID=130081 RepID=M2XSJ9_GALSU) HSP 1 Score: 124 bits (312), Expect = 2.730e-30 Identity = 63/151 (41.72%), Postives = 99/151 (65.56%), Query Frame = 1 Query: 4 KRKQALRSADVICIVYDVTRAETFDSVGSRWMPELAASNVTVPVVLLGNKLDSRDPGDRASLAIRQRIVPLVQQYGNQIEWCLECSAKTMECVQEAFTRAVESVLYPSAPLFDVSSQQLSGKFLAALANIFKQIDFDRDGYITDEELLEYQ 456 K ++ +R ADV+ +VYDV++ ET D S W+P L VTVPVVL+GNK+D R G A ++ I P++ ++ +++ C+ECSAK + + E F A ++V++P+APL+DV+ L K ++AL IF+ D D+DG + DEEL ++Q Sbjct: 67 KLEEEIRKADVLVLVYDVSKRETLDRASSYWLPTLRRLGVTVPVVLVGNKIDVRGIG--ADHSLEHLIKPIMDEF-REVDVCIECSAKQVFNIAELFYYAQKAVIHPTAPLYDVNEHTLKPKAVSALKRIFRLCDKDKDGVLNDEELNQFQ 214
BLAST of mRNA_M-pyrifera_M_contig82038.19191.1 vs. uniprot
Match: A0A139A585_GONPJ (Mitochondrial Rho GTPase n=1 Tax=Gonapodya prolifera (strain JEL478) TaxID=1344416 RepID=A0A139A585_GONPJ) HSP 1 Score: 119 bits (297), Expect = 3.100e-28 Identity = 61/147 (41.50%), Postives = 94/147 (63.95%), Query Frame = 1 Query: 19 LRSADVICIVYDVTRAETFDSVGSRWMPELAASNVTVPVVLLGNKLDSRDPGDRASLAIRQRIVPLVQQYGNQIEWCLECSAKTMECVQEAFTRAVESVLYPSAPLFDVSSQQLSGKFLAALANIFKQIDFDRDGYITDEELLEYQR 459 +R ADVICI+Y V TFD V + W+P + + VPVVL+GNK+D+R D + + ++I+P+++++ ++E C+ECSA+ V E F A ++VL+P+APL+D L + AL IF+ D D+DG + DEEL E+QR Sbjct: 72 IRQADVICILYSVASPPTFDRVATHWIPHIRSLGRNVPVVLVGNKIDTRGE-DVTNEMLEEQIMPVMEEF-KEVETCVECSARLPLNVSEVFYFAQKAVLHPTAPLYDSREHALKPACVDALRRIFRLCDRDKDGVLDDEELNEFQR 216
BLAST of mRNA_M-pyrifera_M_contig82038.19191.1 vs. uniprot
Match: A0A5J4YMH2_PORPP (Mitochondrial Rho GTPase 1 n=1 Tax=Porphyridium purpureum TaxID=35688 RepID=A0A5J4YMH2_PORPP) HSP 1 Score: 117 bits (293), Expect = 1.170e-27 Identity = 62/149 (41.61%), Postives = 97/149 (65.10%), Query Frame = 1 Query: 10 KQALRSADVICIVYDVTRAETFDSVGSRWMPELAASNVTVPVVLLGNKLDSRDPGDRASLAIRQRIVPLVQQYGNQIEWCLECSAKTMECVQEAFTRAVESVLYPSAPLFDVSSQQLSGKFLAALANIFKQIDFDRDGYITDEELLEYQ 456 ++ LR+A+V+ +VYDV+R ET + V W+ +L ++VPVVL GNK+D R D + I P+++++ ++E C+ECSAK + V E F A +SVL+P+APL+DVS+ L K +AAL +F+ D D DG + D+EL ++Q Sbjct: 69 EEELRNANVVVLVYDVSRRETLERVSPVWLRKLHEMEISVPVVLAGNKIDLRT-ADFEERTLEALIKPIMEEH-RELEVCIECSAKQIFNVAEVFYFAQKSVLHPTAPLYDVSTHALRPKTVAALTRVFRLCDKDGDGLLNDKELNDFQ 215
BLAST of mRNA_M-pyrifera_M_contig82038.19191.1 vs. uniprot
Match: A0A165MK68_9AGAM (Mitochondrial Rho GTPase n=3 Tax=Gloeophyllales TaxID=452339 RepID=A0A165MK68_9AGAM) HSP 1 Score: 115 bits (289), Expect = 3.750e-27 Identity = 60/147 (40.82%), Postives = 91/147 (61.90%), Query Frame = 1 Query: 19 LRSADVICIVYDVTRAETFDSVGSRWMPELAASNVTVPVVLLGNKLDSRDPGDRASLAIRQRIVPLVQQYGNQIEWCLECSAKTMECVQEAFTRAVESVLYPSAPLFDVSSQQLSGKFLAALANIFKQIDFDRDGYITDEELLEYQR 459 +R A VIC+VY + A +FD + + W+P V VPV+L+GNK+D R G+ + A+ + IVP++ ++ ++E C+ECSAK V E F A ++VL+P+APL+D L + AL IFK D ++DG + D EL E+QR Sbjct: 72 IRKAHVICVVYSIDNANSFDRIPTYWLPYFRQLGVNVPVILVGNKIDLRG-GEVTNEALEEEIVPIMNEF-KEVETCVECSAKLPLNVSEVFYFAQKAVLHPTAPLYDSRDHVLKPACVNALKRIFKLCDKNKDGILDDAELNEFQR 216
BLAST of mRNA_M-pyrifera_M_contig82038.19191.1 vs. uniprot
Match: A0A4P9XMD4_9FUNG (Mitochondrial Rho GTPase n=1 Tax=Thamnocephalis sphaerospora TaxID=78915 RepID=A0A4P9XMD4_9FUNG) HSP 1 Score: 114 bits (285), Expect = 1.120e-26 Identity = 58/147 (39.46%), Postives = 90/147 (61.22%), Query Frame = 1 Query: 19 LRSADVICIVYDVTRAETFDSVGSRWMPELAASNVTVPVVLLGNKLDSRDPGDRASLAIRQRIVPLVQQYGNQIEWCLECSAKTMECVQEAFTRAVESVLYPSAPLFDVSSQQLSGKFLAALANIFKQIDFDRDGYITDEELLEYQR 459 +R A VIC+VY + TFD + W+P + + V+VPVVL+GNK+D R D + ++ I+P++ ++ ++E C+ECS++ V E F A ++VL+P+APL+D L + AL IFK D D+DG + D EL E+QR Sbjct: 72 IRRAHVICVVYAIDDMRTFDRIPQHWLPYIRSLGVSVPVVLVGNKIDLRG-NDVTNQSLEDDIIPIMNEF-KEVETCVECSSRQPLNVSEVFYFAQKAVLHPTAPLYDARDHALKPTCMEALRRIFKLCDQDKDGVLNDMELNEFQR 216
BLAST of mRNA_M-pyrifera_M_contig82038.19191.1 vs. uniprot
Match: A0A316UHP7_9BASI (Mitochondrial Rho GTPase 1 n=1 Tax=Jaminaea rosea TaxID=1569628 RepID=A0A316UHP7_9BASI) HSP 1 Score: 112 bits (280), Expect = 7.020e-26 Identity = 62/163 (38.04%), Postives = 100/163 (61.35%), Query Frame = 1 Query: 1 GKRKQA-----LRSADVICIVYDVTRAETFDSVGSRWMP---ELAASNVTVPVVLLGNKLDSRDPGDRAS--LAIRQRIVPLVQQYGNQIEWCLECSAKTMECVQEAFTRAVESVLYPSAPLFDVSSQQLSGKFLAALANIFKQIDFDRDGYITDEELLEYQR 459 GK ++A +R+ADV+ +VYD++R TFD + + W+P L S+ VPV+L+GNK+D+R A+ + + + P++ ++G ++E C+E S K V E F A ++VLYPS+PL+D + L +AAL IF D D+D ++DEEL ++QR Sbjct: 85 GKDRRAHLEASVRTADVLLLVYDISRPTTFDRIPTYWLPYLRTLIGSSRHVPVILVGNKIDTRSEAGGANDQQQLEEELAPVMAEFG-EVESCIETSVKEGVNVSEVFYYAQKAVLYPSSPLYDGKTHSLKPSCIAALKRIFLLCDHDKDSLLSDEELQDFQR 246
BLAST of mRNA_M-pyrifera_M_contig82038.19191.1 vs. uniprot
Match: A0A4P9YD14_ROZAC (Mitochondrial Rho GTPase n=2 Tax=Rozella allomycis (strain CSF55) TaxID=988480 RepID=A0A4P9YD14_ROZAC) HSP 1 Score: 112 bits (279), Expect = 8.160e-26 Identity = 60/147 (40.82%), Postives = 89/147 (60.54%), Query Frame = 1 Query: 19 LRSADVICIVYDVTRAETFDSVGSRWMPELAASNVTVPVVLLGNKLDSRDPGDRASLAIRQRIVPLVQQYGNQIEWCLECSAKTMECVQEAFTRAVESVLYPSAPLFDVSSQQLSGKFLAALANIFKQIDFDRDGYITDEELLEYQR 459 ++ VICIVY V ET V + W+P + + V VP+VL+GNK+D R D + + + ++P++ Y ++E C+ECSAKT+ V EAF A ++VL+P+APL+D L AL IF+ D D+DG + DEEL +QR Sbjct: 69 IKKCHVICIVYAVDDDETKKRVSTYWLPRIRSLGVNVPIVLIGNKIDIRGE-DVTNEMLEEEMIPIMSDY-KEVETCVECSAKTLLNVSEAFYFAQKAVLHPTAPLYDSREHVLKPACEDALKRIFQICDLDKDGLLNDEELNLFQR 213
BLAST of mRNA_M-pyrifera_M_contig82038.19191.1 vs. uniprot
Match: A0A177WRZ3_BATDL (Mitochondrial Rho GTPase n=2 Tax=Batrachochytrium dendrobatidis TaxID=109871 RepID=A0A177WRZ3_BATDL) HSP 1 Score: 112 bits (279), Expect = 8.600e-26 Identity = 57/146 (39.04%), Postives = 93/146 (63.70%), Query Frame = 1 Query: 19 LRSADVICIVYDVTRAETFDSVGSRWMPELAASNVTVPVVLLGNKLDSRDPGDRASLAIRQRIVPLVQQYGNQIEWCLECSAKTMECVQEAFTRAVESVLYPSAPLFDVSSQQLSGKFLAALANIFKQIDFDRDGYITDEELLEYQ 456 +R ADVICIVY + R E+F+ + W+P + +PVVL+GNK+D R + + ++ ++I+P++ ++ ++E C+ECSAK V E F A ++VLYP+APL+D L + AL IFK D +++GY+ D+E+ E+Q Sbjct: 71 IRKADVICIVYGIDRPESFERISLYWLPYIRNLGRNIPVVLVGNKIDVRGR-EITNDSLEEQIMPVMNEF-KEVETCVECSAKQPLNVSEVFYFAQKAVLYPTAPLYDSREHILKPACVDALRRIFKLCDTNKNGYLDDDEINEFQ 214
BLAST of mRNA_M-pyrifera_M_contig82038.19191.1 vs. uniprot
Match: A0A4X3PUB5_PRIPA (Mitochondrial Rho GTPase n=2 Tax=Pristionchus pacificus TaxID=54126 RepID=A0A4X3PUB5_PRIPA) HSP 1 Score: 110 bits (275), Expect = 2.950e-25 Identity = 59/153 (38.56%), Postives = 95/153 (62.09%), Query Frame = 1 Query: 10 KQALRSADVICIVYDVTRAETFDSVGSRWMP---ELAASNVTVPVVLLGNKLDSRDPGDRASLAIRQRIVPLVQQYGNQIEWCLECSAKTMECVQEAFTRAVESVLYPSAPLFDVSSQQLSGKFLAALANIFKQIDFDRDGYITDEELLEYQR 459 K +++A VIC+VYDV R ET + V SRW+P E+ + PV+L+GNK D S +++P+++++ ++E C+ECSA+TM+ V E F A ++V+ P+ PL++ ++L+ K AL +FK D D DGY+ D EL E+Q+ Sbjct: 89 KYEIKTASVICVVYDVNRDETIEKVTSRWLPLIREVHGDDHEHPVILVGNKSDG-------STNHTDKVLPIMERWP-EVETCVECSARTMKNVSEIFYYAQKAVVCPTRPLYNADEKRLTEKCKKALIRVFKICDRDNDGYLNDLELNEFQK 233
BLAST of mRNA_M-pyrifera_M_contig82038.19191.1 vs. uniprot
Match: A0A7R9SRW0_9CRUS (Hypothetical protein (Fragment) n=1 Tax=Argulus foliaceus TaxID=509924 RepID=A0A7R9SRW0_9CRUS) HSP 1 Score: 109 bits (273), Expect = 5.550e-25 Identity = 60/152 (39.47%), Postives = 90/152 (59.21%), Query Frame = 1 Query: 13 QALRSADVICIVYDVTRAETFDSVGSRWMP---ELAASNVTVPVVLLGNKLDSRDPGDRASLAIRQRIVPLVQQYGNQIEWCLECSAKTMECVQEAFTRAVESVLYPSAPLFDVSSQQLSGKFLAALANIFKQIDFDRDGYITDEELLEYQR 459 + L A+V+CIVY V A+TF V S+W+P + N P+VL+GNK+D D I + P++ Q+ +IE C+ECSAKT++ + E F A ++VL+P+APL+ ++L+ K +L IFK D D DG I D EL +Q+ Sbjct: 83 EELEHANVVCIVYAVDNADTFQKVTSKWLPLVRNVLGENHNTPIVLVGNKVDLVDD------IIMDDVFPIMNQF-KEIETCVECSAKTLKNISEMFYYAQKAVLHPTAPLYHPDEKELTRKCKDSLIRIFKICDADNDGIINDSELNTFQK 227 The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig82038.19191.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_M-pyrifera_M_contig82038.19191.1 >prot_M-pyrifera_M_contig82038.19191.1 ID=prot_M-pyrifera_M_contig82038.19191.1|Name=mRNA_M-pyrifera_M_contig82038.19191.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=153bp GKRKQALRSADVICIVYDVTRAETFDSVGSRWMPELAASNVTVPVVLLGNback to top mRNA from alignment at M-pyrifera_M_contig82038:348..917+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_M-pyrifera_M_contig82038.19191.1 ID=mRNA_M-pyrifera_M_contig82038.19191.1|Name=mRNA_M-pyrifera_M_contig82038.19191.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=570bp|location=Sequence derived from alignment at M-pyrifera_M_contig82038:348..917+ (Macrocystis pyrifera P11B4 male)back to top Coding sequence (CDS) from alignment at M-pyrifera_M_contig82038:348..917+ >mRNA_M-pyrifera_M_contig82038.19191.1 ID=mRNA_M-pyrifera_M_contig82038.19191.1|Name=mRNA_M-pyrifera_M_contig82038.19191.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=918bp|location=Sequence derived from alignment at M-pyrifera_M_contig82038:348..917+ (Macrocystis pyrifera P11B4 male)back to top |