|
Homology
BLAST of mRNA_M-pyrifera_M_contig8189.19160.1 vs. uniprot
Match: D7FXH2_ECTSI (Inosine-5'-monophosphate dehydrogenase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FXH2_ECTSI) HSP 1 Score: 364 bits (934), Expect = 8.560e-122 Identity = 185/220 (84.09%), Postives = 199/220 (90.45%), Query Frame = 1
Query: 1 SMDLTLDSRDEQQ-AKEDGPDGFSATTIFKSAACCQGLTYDDVILMPGHISFSAEDIELESWVTRNIKLKTPLVSSPMDTVTEAAMAIQMALHGGLGIIHYNMPIAEQAANVREVKRYKNGFIMDPICLTKDHTVQYMRDMKTHQFFSGIPVTEDGKIGSKLLGIVTRRDIDFIGDSSIKLSEVMTTAVVTAKEPVSLEEANALLKSSKKGKLPVIDTEG 657
++ LTLDSRDE KEDGPDGFSA TIFK+A CQGLTYDDVILMPGHISFSAEDI+LES+VT+NIKLKTPLVSSPMDTVTEAAMAIQMALHGGLG+IHYNMPIAEQAANVREVKRYKNGFIMDP+C TKDHTVQ +RDMK Q FSGIP+TEDGKIGSKL GIVTRRDIDFI D S+KLSEVMT +VTA EPV LEEANALLK+SKKGKLPVI+ EG
Sbjct: 2 ALSLTLDSRDEATIVKEDGPDGFSAETIFKAATGCQGLTYDDVILMPGHISFSAEDIDLESYVTKNIKLKTPLVSSPMDTVTEAAMAIQMALHGGLGVIHYNMPIAEQAANVREVKRYKNGFIMDPLCFTKDHTVQDVRDMKAQQSFSGIPITEDGKIGSKLFGIVTRRDIDFIADPSVKLSEVMTKKMVTATEPVGLEEANALLKTSKKGKLPVINAEG 221
BLAST of mRNA_M-pyrifera_M_contig8189.19160.1 vs. uniprot
Match: A0A6H5JL09_9PHAE (Inosine-5'-monophosphate dehydrogenase n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JL09_9PHAE) HSP 1 Score: 360 bits (925), Expect = 1.860e-119 Identity = 184/219 (84.02%), Postives = 196/219 (89.50%), Query Frame = 1
Query: 4 MDLTLDSRDEQQ-AKEDGPDGFSATTIFKSAACCQGLTYDDVILMPGHISFSAEDIELESWVTRNIKLKTPLVSSPMDTVTEAAMAIQMALHGGLGIIHYNMPIAEQAANVREVKRYKNGFIMDPICLTKDHTVQYMRDMKTHQFFSGIPVTEDGKIGSKLLGIVTRRDIDFIGDSSIKLSEVMTTAVVTAKEPVSLEEANALLKSSKKGKLPVIDTEG 657
+ LTLDSRDE KEDGPDGFSA TIFK+ CQGLTYDDVILMPGHISFSAEDI+LES VT+NIKLKTPLVSSPMDTVTEAAMAIQMALHGGLG+IHYNMPIAEQAANVREVKRYKNGFIMDP+C TKDHTVQ +RDMK Q FSGIP+TEDGKIGSKL GIVTRRDIDFI D S+KLSEVMT +VTA EPV LEEANALLKSSKKGKLPVI+ +G
Sbjct: 6 LSLTLDSRDEATIVKEDGPDGFSAETIFKATTGCQGLTYDDVILMPGHISFSAEDIDLESHVTKNIKLKTPLVSSPMDTVTEAAMAIQMALHGGLGVIHYNMPIAEQAANVREVKRYKNGFIMDPLCFTKDHTVQDVRDMKAQQSFSGIPITEDGKIGSKLFGIVTRRDIDFIADPSVKLSEVMTKKMVTAMEPVGLEEANALLKSSKKGKLPVINADG 224
BLAST of mRNA_M-pyrifera_M_contig8189.19160.1 vs. uniprot
Match: A0A836CDH8_9STRA (Inosine-5'-monophosphate dehydrogenase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CDH8_9STRA) HSP 1 Score: 278 bits (711), Expect = 2.300e-88 Identity = 133/202 (65.84%), Postives = 165/202 (81.68%), Query Frame = 1
Query: 52 GPDGFSATTIFKSAACCQGLTYDDVILMPGHISFSAEDIELESWVTRNIKLKTPLVSSPMDTVTEAAMAIQMALHGGLGIIHYNMPIAEQAANVREVKRYKNGFIMDPICLTKDHTVQYMRDMKTHQFFSGIPVTEDGKIGSKLLGIVTRRDIDFIGDSSIKLSEVMTTAVVTAKEPVSLEEANALLKSSKKGKLPVIDTEG 657
GPDGFSA IF S A C G TYDD+ILMPGH+ + + LE+ TRNI+LKTPLVSSPMDTVTE+ MAI MALHGGLG+IHYNMP+ EQA +VR+VKRYKNGFIMDPICL+ DHTV + +K +SGIP+T+DGK+G +LLGIV RD+DF+ D ++KL+EVM+T V+TAKEPV+LEEAN++L SKKGKLPV++ +G
Sbjct: 3 GPDGFSAQEIFDSGAGCTGFTYDDLILMPGHVDLPVDSVSLETNCTRNIRLKTPLVSSPMDTVTESNMAIHMALHGGLGVIHYNMPVEEQAYHVRQVKRYKNGFIMDPICLSPDHTVADIMAIKAKHGYSGIPITKDGKMGGQLLGIVAGRDLDFVTDMNLKLTEVMSTKVITAKEPVTLEEANSILAKSKKGKLPVVNDKG 204
BLAST of mRNA_M-pyrifera_M_contig8189.19160.1 vs. uniprot
Match: A0A7R9UB28_9STRA (Inosine-5'-monophosphate dehydrogenase n=1 Tax=Pinguiococcus pyrenoidosus TaxID=172671 RepID=A0A7R9UB28_9STRA) HSP 1 Score: 248 bits (632), Expect = 1.950e-76 Identity = 120/202 (59.41%), Postives = 157/202 (77.72%), Query Frame = 1
Query: 58 DGFSATTIFKSAACCQGLTYDDVILMPGHISFSAEDIELESWVTRNIKLKTPLVSSPMDTVTEAAMAIQMALHGGLGIIHYNMPIAEQAANVREVKRYKNGFIMDPICLTKDHTVQYMRDMKTHQFFSGIPVTEDGKIGSKLLGIVTRRDIDFIGDSSIKLSEVMTTAVVTAKEPVSLEEANALLKSSKKGKLPVIDTEGKV 663
DG+SAT +F+ C G TYDD+IL+PGHI F ED+ LE+ VT+ IK+K P+VSSPMDTVTEA MAI MALHGGLG++HYN I EQA VR+VK+YKNGFI +P+CL+ +HT+ + +K +SGIP+TE+GK+ S+LLGIV+ RD DF+ D S L ++M+T +VTA E VSL EANALLKS+KKGKLPV++ G++
Sbjct: 15 DGYSATDVFEGGHGCTGYTYDDLILLPGHIDFGVEDVALETNVTKKIKVKLPIVSSPMDTVTEAKMAIAMALHGGLGVVHYNCTIEEQADFVRQVKKYKNGFITEPVCLSPEHTIADVDSVKERFGYSGIPITEEGKMHSRLLGIVSSRDSDFVEDRSTPLRDIMSTKLVTAPEGVSLREANALLKSAKKGKLPVVNAAGEL 216
BLAST of mRNA_M-pyrifera_M_contig8189.19160.1 vs. uniprot
Match: A0A7X9DF17_9SPIR (CBS domain-containing protein (Fragment) n=1 Tax=Spirochaetes bacterium TaxID=2202144 RepID=A0A7X9DF17_9SPIR) HSP 1 Score: 237 bits (604), Expect = 3.360e-74 Identity = 118/200 (59.00%), Postives = 155/200 (77.50%), Query Frame = 1
Query: 58 DGFSATTIFKSAACCQGLTYDDVILMPGHISFSAEDIELESWVTRNIKLKTPLVSSPMDTVTEAAMAIQMALHGGLGIIHYNMPIAEQAANVREVKRYKNGFIMDPICLTKDHTVQYMRDMKTHQFFSGIPVTEDGKIGSKLLGIVTRRDIDFIGDSSIKLSEVMTTAVVTAKEPVSLEEANALLKSSKKGKLPVIDTEG 657
DG+SA + S QGL+Y+D I++PG+I F+ +D++LE+ TRN+KLK PLVSSPMDTVTE+ MAI +AL GG+GIIHYN I EQ A VR+VKR++NGFI DP+ L+ +HT+ ++ ++K FSGIP+T DGK+GSKL+GIVT RDIDF D S KL +VMTT +VTAK ++L +AN LLK SKKGKLP++D EG
Sbjct: 5 DGYSAEELLNST---QGLSYNDFIILPGYIDFNPDDVDLETQFTRNLKLKRPLVSSPMDTVTESKMAISLALLGGIGIIHYNNTIEEQVAQVRKVKRFENGFITDPVVLSPEHTIAHIDEIKEKFGFSGIPITVDGKLGSKLIGIVTNRDIDFETDRSKKLKDVMTTDLVTAKVGITLAQANELLKKSKKGKLPIVDDEG 201
BLAST of mRNA_M-pyrifera_M_contig8189.19160.1 vs. uniprot
Match: A0A7V3Y4G0_9SPIR (CBS domain-containing protein (Fragment) n=1 Tax=Spirochaetes bacterium TaxID=2202144 RepID=A0A7V3Y4G0_9SPIR) HSP 1 Score: 232 bits (592), Expect = 1.290e-73 Identity = 115/202 (56.93%), Postives = 157/202 (77.72%), Query Frame = 1
Query: 58 DGFSATTIFKSAACCQGLTYDDVILMPGHISFSAEDIELESWVTRNIKLKTPLVSSPMDTVTEAAMAIQMALHGGLGIIHYNMPIAEQAANVREVKRYKNGFIMDPICLTKDHTVQYMRDMKTHQFFSGIPVTEDGKIGSKLLGIVTRRDIDFIGDSSIKLSEVMTTAVVTAKEPVSLEEANALLKSSKKGKLPVIDTEGKV 663
DG+SA + S QG++Y+D I++PG+I F+ +D++LE+ +TRN+KLK PLVSSPMDTVTE+ MAI +AL GG+GIIHYN I EQ A V++VKR++NGFI DP+ L+ +HT+ ++ ++K FSGIP+T DGK+GSKL+GIVT RDIDF D S KL EVMTT +VTA ++L +AN +LK SKKGKLP++D EG++
Sbjct: 5 DGYSAEELLNST---QGISYNDFIILPGYIDFNPDDVDLETRLTRNLKLKRPLVSSPMDTVTESKMAISLALLGGIGIIHYNNTIEEQVALVQKVKRFENGFITDPVVLSPEHTIAHIDEIKEKFGFSGIPITIDGKLGSKLVGIVTNRDIDFETDRSKKLKEVMTTDLVTANIGITLAQANEILKKSKKGKLPIVDNEGRL 203
BLAST of mRNA_M-pyrifera_M_contig8189.19160.1 vs. uniprot
Match: A0A7S1UMG5_9STRA (Inosine-5'-monophosphate dehydrogenase n=2 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1UMG5_9STRA) HSP 1 Score: 239 bits (609), Expect = 1.180e-72 Identity = 116/205 (56.59%), Postives = 155/205 (75.61%), Query Frame = 1
Query: 49 DGPDGFSATTIFKSAACCQGLTYDDVILMPGHISFSAEDIELESWVTRNIKLKTPLVSSPMDTVTEAAMAIQMALHGGLGIIHYNMPIAEQAANVREVKRYKNGFIMDPICLTKDHTVQYMRDMKTHQFFSGIPVTEDGKIGSKLLGIVTRRDIDFIGDSSIKLSEVMTTAVVTAKEPVSLEEANALLKSSKKGKLPVIDTEGKV 663
D DG+S + +F+ C G TYDD+IL+PGHI F+ ++ LE+ VT+NI LK P+VSSPMDTVTEA MAI MALHGGLG++HYN I EQA VR+VK+YKNGFI DP+CL+ + T+ + +K +SGIP+TE+GK+ SKLLGIV+ RD+DF+ D + L VM+T +VTA+E VSL EAN LL+ +KKGKLPV++ G++
Sbjct: 46 DATDGYSGSDVFEGGHGCTGYTYDDLILLPGHIDFAVHEVSLETKVTKNISLKLPMVSSPMDTVTEADMAINMALHGGLGVVHYNCTIEEQADFVRKVKKYKNGFITDPVCLSPEATIADVDQVKEAFGYSGIPITEEGKMHSKLLGIVSSRDVDFVEDRTTPLRNVMSTDLVTAQEGVSLREANELLRQAKKGKLPVVNEAGEL 250
BLAST of mRNA_M-pyrifera_M_contig8189.19160.1 vs. uniprot
Match: A0A7S0XDI4_9STRA (Hypothetical protein (Fragment) n=1 Tax=Chromulina nebulosa TaxID=96789 RepID=A0A7S0XDI4_9STRA) HSP 1 Score: 231 bits (588), Expect = 1.610e-72 Identity = 117/206 (56.80%), Postives = 151/206 (73.30%), Query Frame = 1
Query: 46 EDGPDGFSATTIFKSAACCQGLTYDDVILMPGHISFSAEDIELESWVTRNIKLKTPLVSSPMDTVTEAAMAIQMALHGGLGIIHYNMPIAEQAANVREVKRYKNGFIMDPICLTKDHTVQYMRDMKTHQFFSGIPVTEDGKIGSKLLGIVTRRDIDFIGDSSIKLSEVMTTAVVTAKEPVSLEEANALLKSSKKGKLPVIDTEGKV 663
E+G DG+S IF + TYDDVI++PG++ + D+ L+S +TR IK+K PL+SSPMDTVTE MAI MA+ G +GIIHYNM I EQA VR VK+YKNGFI DP CL+ +H V + +K +SGIP+T DGKIGSKL+GIVT RD+D+I D S KLS+VMTT +VTA E +SL +AN LL+ SKKGKLPV++ G++
Sbjct: 13 ENGSDGYSIHQIFTIKSNAYAYTYDDVIILPGNLYSNKNDVALDSHITRTIKIKLPLLSSPMDTVTEHEMAIAMAMLGAIGIIHYNMTIEEQAREVRLVKKYKNGFITDPACLSPNHLVSDVDKLKERFGYSGIPITIDGKIGSKLVGIVTNRDVDYILDRSTKLSDVMTTDLVTAPEGISLNQANELLRQSKKGKLPVVNNSGEI 218
BLAST of mRNA_M-pyrifera_M_contig8189.19160.1 vs. uniprot
Match: A0A7S0PFH1_CAFRO (Inosine-5'-monophosphate dehydrogenase n=2 Tax=Cafeteria roenbergensis TaxID=33653 RepID=A0A7S0PFH1_CAFRO) HSP 1 Score: 238 bits (606), Expect = 3.310e-72 Identity = 122/200 (61.00%), Postives = 151/200 (75.50%), Query Frame = 1
Query: 49 DGPDGFSATTIFKSAACCQGLTYDDVILMPGHISFSAEDIELESWVTRNIKLKTPLVSSPMDTVTEAAMAIQMALHGGLGIIHYNMPIAEQAANVREVKRYKNGFIMDPICLTKDHTVQYMRDMKTHQFFSGIPVTEDGKIGSKLLGIVTRRDIDFIGDSSIKLSEVMTTAVVTAKEPVSLEEANALLKSSKKGKLPVID 648
DGPDG+SA T+F + G TYDD+I +PGHI+F E+I+L S +TRNI L+TPLVSSPMDTVTE+ MA+ MAL GG+GIIHYN + EQAA VR VKRY+NGFI DP+CLT D TV + +K FSG P+T DG+IGS+L+GIVT RDIDF D LSEVMTT +V A+E VSL AN +L+ SKKGKLP+++
Sbjct: 49 DGPDGWSAATLFGRSPST-GYTYDDIIFLPGHITFGTEEIDLSSRLTRNITLQTPLVSSPMDTVTESEMAVNMALQGGIGIIHYNCTMDEQAAFVRNVKRYENGFISDPMCLTPDQTVGDVLAIKAKFGFSGFPITVDGRIGSRLVGIVTNRDIDFREDHDTPLSEVMTTDLVVAQEGVSLAGANLILRESKKGKLPIVN 247
BLAST of mRNA_M-pyrifera_M_contig8189.19160.1 vs. uniprot
Match: A0A7S2Y0L1_9STRA (Inosine-5'-monophosphate dehydrogenase n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2Y0L1_9STRA) HSP 1 Score: 235 bits (599), Expect = 2.080e-71 Identity = 114/207 (55.07%), Postives = 156/207 (75.36%), Query Frame = 1
Query: 43 KEDGPDGFSATTIFKSAACCQGLTYDDVILMPGHISFSAEDI--ELESWVTRNIKLKTPLVSSPMDTVTEAAMAIQMALHGGLGIIHYNMPIAEQAANVREVKRYKNGFIMDPICLTKDHTVQYMRDMKTHQFFSGIPVTEDGKIGSKLLGIVTRRDIDFIGDSSIKLSEVMTTAVVTAKEPVSLEEANALLKSSKKGKLPVIDTEG 657
+E G +GF+ IF+ C G +YDD+ILMPGH+ +D+ +L S +++NI LK PLVSSPMDTVTE++MAI MALHG +GI+HYN + EQA VR+VKR+KNGFI DP CL+ +TV +++T FSG+P+TEDGKIGSKL+G ++ RD DF+ D++ +S++M T ++TAKEPV+LEEAN +L SKKGKLPV+D +G
Sbjct: 21 EEGGSNGFTGKHIFREGLGCVGYSYDDLILMPGHVE---DDVAPDLSSKISKNITLKVPLVSSPMDTVTESSMAIMMALHGAIGIVHYNCTVEEQANEVRKVKRFKNGFINDPACLSPTNTVADALELRTKNGFSGMPITEDGKIGSKLVGFISSRDFDFVEDTATPISQIMVTDLITAKEPVTLEEANEVLHKSKKGKLPVVDDKG 224
The following BLAST results are available for this feature:
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Property Name | Value |
Taxonomic scope | Eukaryota |
Seed ortholog score | 366.3 |
Seed ortholog evalue | 9.9e-99 |
Seed eggNOG ortholog | 2880.D7FXH2 |
Preferred name | IMPDH2 |
KEGG rclass | RC00143,RC02207 |
KEGG ko | ko:K00088 |
KEGG Reaction | R01130,R08240 |
KEGG Pathway | ko00230,ko00983,ko01100,ko01110,map00230,map00983,map01100,map01110 |
KEGG Module | M00050 |
Hectar predicted targeting category | other localisation |
GOs | GO:0000166,GO:0000323,GO:0000785,GO:0000902,GO:0000904,GO:0001654,GO:0001775,GO:0002252,GO:0002263,GO:0002274,GO:0002275,GO:0002283,GO:0002366,GO:0002376,GO:0002443,GO:0002444,GO:0002446,GO:0003674,GO:0003676,GO:0003677,GO:0003682,GO:0003723,GO:0003729,GO:0003824,GO:0003938,GO:0005488,GO:0005575,GO:0005576,GO:0005622,GO:0005623,GO:0005634,GO:0005694,GO:0005737,GO:0005764,GO:0005766,GO:0005773,GO:0005775,GO:0005829,GO:0005886,GO:0006139,GO:0006163,GO:0006164,GO:0006183,GO:0006725,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0006810,GO:0006887,GO:0006928,GO:0006935,GO:0006950,GO:0006955,GO:0007154,GO:0007275,GO:0007399,GO:0007409,GO:0007411,GO:0007423,GO:0007623,GO:0008150,GO:0008152,GO:0008283,GO:0009058,GO:0009116,GO:0009117,GO:0009119,GO:0009123,GO:0009124,GO:0009126,GO:0009127,GO:0009141,GO:0009142,GO:0009144,GO:0009145,GO:0009150,GO:0009152,GO:0009156,GO:0009161,GO:0009163,GO:0009165,GO:0009167,GO:0009168,GO:0009199,GO:0009201,GO:0009205,GO:0009206,GO:0009259,GO:0009260,GO:0009266,GO:0009267,GO:0009409,GO:0009605,GO:0009607,GO:0009628,GO:0009653,GO:0009719,GO:0009725,GO:0009735,GO:0009987,GO:0009991,GO:0010033,GO:0012505,GO:0016020,GO:0016043,GO:0016192,GO:0016491,GO:0016614,GO:0016616,GO:0018130,GO:0019438,GO:0019637,GO:0019693,GO:0022008,GO:0022607,GO:0030030,GO:0030141,GO:0030154,GO:0030182,GO:0030447,GO:0031175,GO:0031347,GO:0031349,GO:0031410,GO:0031667,GO:0031668,GO:0031669,GO:0031974,GO:0031982,GO:0031983,GO:0032501,GO:0032502,GO:0032940,GO:0032943,GO:0032989,GO:0032990,GO:0033554,GO:0034097,GO:0034404,GO:0034641,GO:0034654,GO:0034774,GO:0035578,GO:0035690,GO:0035821,GO:0036094,GO:0036170,GO:0036180,GO:0036230,GO:0040007,GO:0040011,GO:0042119,GO:0042221,GO:0042278,GO:0042330,GO:0042451,GO:0042455,GO:0042493,GO:0042582,GO:0042594,GO:0043010,GO:0043207,GO:0043226,GO:0043227,GO:0043228,GO:0043229,GO:0043231,GO:0043232,GO:0043233,GO:0043299,GO:0043312,GO:0043473,GO:0043933,GO:0044003,GO:0044085,GO:0044182,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044283,GO:0044403,GO:0044416,GO:0044419,GO:0044422,GO:0044424,GO:0044427,GO:0044433,GO:0044437,GO:0044444,GO:0044446,GO:0044464,GO:0045055,GO:0045321,GO:0046039,GO:0046128,GO:0046129,GO:0046390,GO:0046483,GO:0046649,GO:0046651,GO:0046903,GO:0048066,GO:0048468,GO:0048511,GO:0048513,GO:0048518,GO:0048583,GO:0048584,GO:0048666,GO:0048667,GO:0048699,GO:0048731,GO:0048812,GO:0048856,GO:0048858,GO:0048869,GO:0050789,GO:0050896,GO:0051179,GO:0051234,GO:0051259,GO:0051260,GO:0051262,GO:0051289,GO:0051701,GO:0051704,GO:0051707,GO:0051716,GO:0051817,GO:0052031,GO:0052173,GO:0052200,GO:0052251,GO:0052255,GO:0052509,GO:0052510,GO:0055086,GO:0055114,GO:0060041,GO:0060205,GO:0061564,GO:0065003,GO:0065007,GO:0070013,GO:0070661,GO:0070670,GO:0070887,GO:0071310,GO:0071345,GO:0071353,GO:0071496,GO:0071704,GO:0071840,GO:0071944,GO:0072521,GO:0072522,GO:0075136,GO:0080134,GO:0090407,GO:0097159,GO:0097485,GO:0097708,GO:0099503,GO:0101002,GO:0120036,GO:0120039,GO:1901068,GO:1901070,GO:1901135,GO:1901137,GO:1901265,GO:1901293,GO:1901360,GO:1901362,GO:1901363,GO:1901564,GO:1901566,GO:1901576,GO:1901657,GO:1901659,GO:1904813 |
EggNOG free text desc. | IMP dehydrogenase activity |
EggNOG OGs | COG0516@1,KOG2550@2759 |
Ec32 ortholog description | IMP dehydrogenase/GMP reductase |
Ec32 ortholog | Ec-19_000030.1 |
EC | 1.1.1.205 |
COG Functional cat. | F |
Best tax level | Eukaryota |
Best eggNOG OG | NA|NA|NA |
BRITE | ko00000,ko00001,ko00002,ko01000,ko04147 |
Exons | 6 |
Model size | 663 |
Cds size | 660 |
Stop | 0 |
Start | 1 |
Relationships
The following CDS feature(s) are a part of this mRNA:
Feature Name | Unique Name | Species | Type | Position |
1622816726.104149-CDS-M-pyrifera_M_contig8189:235..352 | 1622816726.104149-CDS-M-pyrifera_M_contig8189:235..352 | Macrocystis pyrifera P11B4 male | CDS | M-pyrifera_M_contig8189 236..352 - |
1692278142.7665145-CDS-M-pyrifera_M_contig8189:235..352 | 1692278142.7665145-CDS-M-pyrifera_M_contig8189:235..352 | Macrocystis pyrifera P11B4 male | CDS | M-pyrifera_M_contig8189 236..352 - |
1622816726.115056-CDS-M-pyrifera_M_contig8189:3345..3492 | 1622816726.115056-CDS-M-pyrifera_M_contig8189:3345..3492 | Macrocystis pyrifera P11B4 male | CDS | M-pyrifera_M_contig8189 3346..3492 - |
1692278142.7824588-CDS-M-pyrifera_M_contig8189:3345..3492 | 1692278142.7824588-CDS-M-pyrifera_M_contig8189:3345..3492 | Macrocystis pyrifera P11B4 male | CDS | M-pyrifera_M_contig8189 3346..3492 - |
1622816726.125586-CDS-M-pyrifera_M_contig8189:4588..4674 | 1622816726.125586-CDS-M-pyrifera_M_contig8189:4588..4674 | Macrocystis pyrifera P11B4 male | CDS | M-pyrifera_M_contig8189 4589..4674 - |
1692278142.7950938-CDS-M-pyrifera_M_contig8189:4588..4674 | 1692278142.7950938-CDS-M-pyrifera_M_contig8189:4588..4674 | Macrocystis pyrifera P11B4 male | CDS | M-pyrifera_M_contig8189 4589..4674 - |
1622816726.1360688-CDS-M-pyrifera_M_contig8189:5302..5408 | 1622816726.1360688-CDS-M-pyrifera_M_contig8189:5302..5408 | Macrocystis pyrifera P11B4 male | CDS | M-pyrifera_M_contig8189 5303..5408 - |
1692278142.8070502-CDS-M-pyrifera_M_contig8189:5302..5408 | 1692278142.8070502-CDS-M-pyrifera_M_contig8189:5302..5408 | Macrocystis pyrifera P11B4 male | CDS | M-pyrifera_M_contig8189 5303..5408 - |
1622816726.1468031-CDS-M-pyrifera_M_contig8189:6361..6429 | 1622816726.1468031-CDS-M-pyrifera_M_contig8189:6361..6429 | Macrocystis pyrifera P11B4 male | CDS | M-pyrifera_M_contig8189 6362..6429 - |
1692278142.8166385-CDS-M-pyrifera_M_contig8189:6361..6429 | 1692278142.8166385-CDS-M-pyrifera_M_contig8189:6361..6429 | Macrocystis pyrifera P11B4 male | CDS | M-pyrifera_M_contig8189 6362..6429 - |
1622816726.158022-CDS-M-pyrifera_M_contig8189:6897..7033 | 1622816726.158022-CDS-M-pyrifera_M_contig8189:6897..7033 | Macrocystis pyrifera P11B4 male | CDS | M-pyrifera_M_contig8189 6898..7033 - |
1692278142.830781-CDS-M-pyrifera_M_contig8189:6897..7033 | 1692278142.830781-CDS-M-pyrifera_M_contig8189:6897..7033 | Macrocystis pyrifera P11B4 male | CDS | M-pyrifera_M_contig8189 6898..7033 - |
The following UTR feature(s) are a part of this mRNA:
Feature Name | Unique Name | Species | Type | Position |
1622816726.17859-UTR-M-pyrifera_M_contig8189:7033..7036 | 1622816726.17859-UTR-M-pyrifera_M_contig8189:7033..7036 | Macrocystis pyrifera P11B4 male | UTR | M-pyrifera_M_contig8189 7034..7036 - |
1692278142.8425996-UTR-M-pyrifera_M_contig8189:7033..7036 | 1692278142.8425996-UTR-M-pyrifera_M_contig8189:7033..7036 | Macrocystis pyrifera P11B4 male | UTR | M-pyrifera_M_contig8189 7034..7036 - |
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_M-pyrifera_M_contig8189.19160.1 >prot_M-pyrifera_M_contig8189.19160.1 ID=prot_M-pyrifera_M_contig8189.19160.1|Name=mRNA_M-pyrifera_M_contig8189.19160.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=220bp
MDLTLDSRDEQQAKEDGPDGFSATTIFKSAACCQGLTYDDVILMPGHISF SAEDIELESWVTRNIKLKTPLVSSPMDTVTEAAMAIQMALHGGLGIIHYN MPIAEQAANVREVKRYKNGFIMDPICLTKDHTVQYMRDMKTHQFFSGIPV TEDGKIGSKLLGIVTRRDIDFIGDSSIKLSEVMTTAVVTAKEPVSLEEAN ALLKSSKKGKLPVIDTEGKV back to topmRNA from alignment at M-pyrifera_M_contig8189:236..7036- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_M-pyrifera_M_contig8189.19160.1 ID=mRNA_M-pyrifera_M_contig8189.19160.1|Name=mRNA_M-pyrifera_M_contig8189.19160.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=6801bp|location=Sequence derived from alignment at M-pyrifera_M_contig8189:236..7036- (Macrocystis pyrifera P11B4 male) AGCATGGACCTCACCTTGGACTCCCGGGACGAGCAGCAGGCCAAGGAGGA
CGGGCCGGATGGGTTTTCCGCGACAACGATATTCAAATCTGCGGCTTGCT
GCCAGGGCCTGACGTACGATGACGTCATCCTCATGCCAGGTGAGCGCTCA
AGTGCCTCGTGCTCTTAGAACGGGCCGCTGGTGGGCTTTACTATTTCCAT
CTGTGCGAGCAGTGACCAGTGCAGGGTTGTGCGCCGCACACGCCGCCGTA
CGAATAGGCCGTAAGGTGACTTGTTTGATCGATAGCGGACCTCGCGCTGT
TGCGCTGCGGAGCCGTACTATCGAAGCTTCCCCCAAGCTCAGTTTTTTAT
TGCACAACGTATAACTGCTTTCTTGCCTCGCATTTAGTTATATTAAACAT
GGTACGTATTATGCCGTATCCGCCCGCCGGAGCTATGTACGAGTATAATT
ACTGTCTGTCTGTCTGTCTGTCTGTTTTATGTCTATGCGGTACGGTGCGG
TGCGGCAACGCATCGGCCATGGCAACGTGTGAACGGTGACTGAAATGTTT
CTGTTTTCTTGCTTGTACGCTACGCGGTACTTTTGTTCCGTCTGGCATTT
TTGACAGGTCACATCTCGTTCTCCGCTGAGGACATTGAACTGGAGTCATG
GGTAACGAGAAACATCAAGCTCAAGGTGCGACTCTACTCTTATCAGTGCA
TACTGCAGTACGTATTAATCTGTTTCACTTGCTTTACATAAGTGCAGCCC
CCACGTTGTTTTTCGGTCGCTTTTCGACTCATCCGTTAGTGCGCTAGTGC
GTTAGTCCGTGAATACGAACAGTACAGTAGTTTGTTATTACAGTCCAGTA
ACAGTAACCAGATTCAATTACGTCAAGAACCAAGAAAGTTTTTGTGTTGC
AAGAAGTGCGCTTTGCGTTATCCGTCACCCACTGCATTATCCGTTAATTG
CTGTACAATCTGTATATGTCTTACACTAGCAGGCAATACAGCAGTACCTT
TCTTGACGGAAGGCGTTCTTTGTATGCAATACATAGTACACTAAAACGAA
AAATGTCGAAAATTGTTGTTAACCCTGAGTCCTATTATATGTACCTGATA
CCCTGATATGTGTTATTTGGACTACTATGCTGTATTTCGTGCGTACGTAC
ACAGCAGTATTTGAATTGCGTGGAGTGTTTTTGTTGTGGGTGTCAAGAGT
GATACGTGGTAATGTGTTGAGCAATACGTACAGTAGCAGTAGAAATCGGT
GACGGAACCAAAGAACATGCATCTTATGTGTTCACACCATGTTTGGACAT
GTATACTACTATACTGCTGTGCTGTAGTGTTAGTAATATTAGTATAATAT
TATTAGGATGATCCCCCGTGATAGTGATGGTGATGCTATAAGAGTCTAGT
CTTACTGACTGTAGTCTTTTTTCGTGCGACGGAGGCTTTGTTGTCAGTCT
CTTCCCTGAAAAGGTCAAGATGTCACTATGCCCAGGCTTGAGGTGTTAGC
TTACAGGCATTTCTGCTTTCGTTAGTCTCTTGTTTGTCTTGACGGTTTCC
ACTCCTCTGCTGTTGCGCCCCGGCGCTGCTTGCTCCGGCGGACGGACACT
GGTTGAACGCGCGTGTGTCATGCGATAGACACCGCTCGTATCGTCTCCAA
TGGACACTGTCACGGAGGCTGCTATGGCCATACAGATGGCGCTGCACGGC
GGCCTGGGCATCATTCACTACAACATGCCCATTGGTGAGTGACTGAGTCA
AAGCTGCCCTTCGCTTTAACCAGCGGGACGTGCAGTTTTAGTTTTGTTGA
TTTTCTGACCCATGTCAGCGCGAGCTGTGTTTGTCATGCGGTATTATTTT
TCCCGGCAAGTTGCTATTAATGCTGTAGCTACCGGTCTCACCTCTGCACG
TGTCTCCCTCTGTGGAGATAACCCCCGACGGTTTCACGCATGAAATCGAC
ATCACCCCTACAAAGACAGAAGTTTCTGCATAACCCAACGGCACTATAGA
CTATAGTACTGTACTGTCCCACGGTAAAGGCAACAGCCGTCCACGAGCTC
GTCTGGCCGTGTATTGCCGTTTCTGCCCACAGACACCATACCCTGCTTCA
CAAAGTCACACCAATACTCACGCATGCTAGATCACAAATCGCCCTCTCGC
GTATGCCGCACTGTGATGCGTGTTTGACATGTGGTTCTATATGTAGGTGC
TGACTGTTTCAGTAATAATAGCTGGTGACCTTAGTGGGGATTTGTCCTTG
GCGTATCTATATAGGTAGTAACTCAATGTGTGTTCGTAGTTTTGCTGCTG
AATACTTGAATAGCTGCTGACCCTGGCGACTTTTTCTTTGGCGTGTCTGG
CACATCCGGCAGCGGAACAGGCGGCGAACGTCCGAGAGGTGAAGCGTTAC
AAGAACGGTTTCATCATGGACCCCATCTGCCTCACGAAGGACCACACCGT
GAGTCGACAGCAAAACGCGAGGGTGGACATGGCGATGCTTTCTTTATTTT
TGTGTGTTCAACGTGTAGGCGAAAGGTTGATAGTCGCGATTCCCCCGCTC
ACCGGGTGTGCTACTTACCATACCTCTATCTTACCTCGGTTTCGCTTCTG
TATTACTGATGTGTGTGTGTGTGTTGATGTGATACTGCTGTGGTACTGCT
GTAGTCTTCATGTAGTCCCTCCTGTTAGACCCGGGATTTTTTGTGGTGGT
GGTGCGTGATTGCGCTCCTGGTTGTCGTGGGGGGTGGCACTCGTCCTTAA
TTGTGCCAGATATCTATTGGGGGTAGGAGGGATCGCACCTATTGTCGTAT
TATAGGTACTCTATTATTTATTTGCGTGCGTTTATCACGCTGACCCGAGG
TGACTAAAGTTGGCCTCCCCTCCTTCCTTCCTTACCCCTAACCCTTACCC
TGCATTTGTGTACAGCAGTATATACCTACAGTATGTATCGCGCACTGGGC
CCGACACTCCCTACATTCCTTAGTTCCTGGTGTTCATGCTTGGTTTCTTA
TTGCATCAGTATTATTAACAATTATTATTAATAAGTCGGAATGACACACA
AGACAAGACCACATCCACTAGCTTGAGTATACAGAGTATTCCAACCAAGG
TCGAGAAATCTTGTCTGCACCGTGCACCATGGCAGCTGGCATATGCTTGT
GCTCTGTTTAGTAGGTCGTTGTCCCGAGGGCCTGACCCCTCTGTTTACTG
TGTACGCTATTCGACCATGGTTGCGTACATATTTCTTGTGATACTTGAAC
GGAGTGCTTTCCCGGTTGGGGCAACATACTTCCGGGCTAAACGTACAGCT
ACATTGGGTGTATACAGTATCGGTATGATATGATAACGGGAGTTGCATCA
ATGCTCTACGGTAATTCCGGCCCTGTCCTCTCTGTTCTGTTTATTCGATG
TCTCGAGGTTGGTAATTGGCGTGTCGTACATGTCGTCGGTCCTATGGTAT
GTGTGCGTTGCCTGGCTGACGTGTATCGCGTCGCTTCCCTGTTTTGGATG
CACTGGTTGTATTGTTTGATCCTCCCCCGTAACGGCGAGCCAAGGTCCAA
TACATGCGGGATATGAAAACTCACCAATTTTTCAGCGGCATCCCCGTGAC
GGAAGACGGAAAGATTGGATCAAAGCTGCTCGGCATCGTCACTCGAAGAG
ATATCGACTTCATCGGCGACTCGTCCATCAAGCTCTCAGAGGTATATATA
TATGCGGTCATGTTGTCATCTTGTGGTACTGTCTCCGATTGCCTTACTTC
GTGTCCTATCAGCAGATCTATTGGACCCTTCACGAATTTGGCGGGGAACT
TGTCGAAAGTGTTTTGAGGGTAACGGTTAAATTAGCCAGGTGAAGCAACC
GTAGGGCCGGGGGATTCGTGAAAAGTGCAAGGTAAGGAGATTTGTATAGA
TGTACAACACGCGCATGGCATGACACATAGTATTAATAAATGAATGATGA
ATGGTACTGCTACACGCTCTTCTTATGTAGTGTGGTTGAGTATAGACAGC
CGCTCAACCGCTCTTGACGATTTATGATCGGTGCACGAAGGTCGAAAAAG
TCATTTATAGGCGTGTGTTTGCCCCCTCGTGCGTACTGGCATCGCGTATG
GCCTGATGCCGGGCTTCGTCAGAGTACTCTTATTGTATTAACAGCAAACC
ACACACTTACTAGAATTATCTCGGGGCTTTTGTTCGGCGTGCCGCGCTCG
CGCTCCATCGTGCAAGTGGCTTATTTTGCCATCATGCTATCGCCATGTAA
ATCGTTGTCCATTGCCGTTCTGTTCTGTGATCATTTACAATAGTGCTGCG
AAAAGAACCCCGACACTATTGTAGTAAGTGCAAGCAGTTTGCTCTCAAAG
GCGCCACTGTCAATAGCAGGGTACAGTTCTGACGAGATTAAATTGATGAC
GGTTGTTGCAACTCGCGTATGTTTGTTCTTGGTGAGCTATGTGTCTATAT
CGAAGTATGTCGACAGTGTGGGCTCAACATCGGAGGGAGGCAGCTTTTGG
TTTCGGCTTTCTCTCTGGTTCCGCCTCCCGGGAACTCATAATCGTACGAA
GTACGTACGTCGTAGAGGTTTGGCTTCGACCGGTCGACTGTTGTGTGAAC
GTGATTTGTACTGAACAGCAATAGCTCGGTGCAAAGTACATGATAAAGGC
CAGTCATGCTATCTGTCTCTCTTACCTCTTTTAGTACTGCGCTATCCTGA
AGCGAAGGCGCGCTGAAACCTCGGATTCCAGAAATCAAAACCGGTTTGCC
ATAAGAGATGACCTAACTCTAATTCCAAGTAATTTGTCCCCATTGCAGGA
GAGCGGTCCTAAATGGCTTAACTGGCCTGTTGCCGCATTGCCCCAGGCAC
TCTTTTCCCTATTTATTGTTTTTGTTCCCATCTATTTAGTCTATCCGCCC
TTCTTTTCTGTCTCTTCTATTATTTTATAGTATTAATACTCACAGTGTCC
GTGGTACCGGTAGCTACAGTAGCTTCCTCTGCCCCCTCCCCACAACGGTT
CTGTTGAGTACTGATCCTTATGAGATGACGAGATGAGATGAGATGAGATG
AGATGAGTTAGGCACTCAGACAACCCAGAGGGTGACCACACTATAGAACT
ACTGACAGATATCTCACTCTCTCAGCGTGCTCGGTTGGTACATCCCTGGC
CTCTCAGAGCTCCCACTTGGACATCGCATCTTTTGATTACTTTCCGGACC
TTTCCAGCGGTTCTTTGTTTTCTCCGTTTTTCTTGGCACTTTTCAGTTAA
TTTTTCCTTTTTTCTCCTTTCGTTTCGTGTGTGTTAGTGCGTGCGTGTAC
TCCGAGCACGGCACCGCGGGCGACGGCGGCACTGTCACGGGTGTCAGCGG
GTGGTGGCGGGTAGAGGAGGGGTTGCAAGGAGTGCGGTCGCCGTTTTTGT
GGCTAGGCGTCGTGTGTGCCTCGAGACACGAGGAAAGCATGAATAGGCTC
TGTCTGGCCTCCATCGTTAGAATTAGATTGATTGTGTAAGAGTCTATAAG
GGTCGTTCGGGATTGCAAAATAACGTTCAAGCGGTGCTTATTTTTGCGAC
CAAGTTGAAGTTCACAGGGAGGGCTACACAGTCTGAGCACCAACATTGTC
GAGCTGGCGAACGAGGTCCTCGGTGAGCACCGGGCTTCACGCGAGGCGGG
CGACGGGGCTCACTGTGACGGAGAGGGAGGACAGCTTTACCCGGACCGAA
TCGGTGGCGAGATGGTCGCGAGAGGGGCGGGGGGCGGACGAGGCTGACAG
AGAAGCTCTGCTGCTCGTTTTTCTTTCTTTCTTTTTAACCGGTGTAAGGT
GTTCCAATCAGGCAGGAAATTATTACACGGGAGGGGACGGGGATTATTTT
TTCTTTCCGAAAATTAAGGTTCCATTTTGTTTCATTGTTTTTGCGGTGCT
GCTGTGCCGTGCTGTGCTTTCTCTTTCGTACATACGAGTACAGACATACA
GCATACCAAAAAGAAAACAAGTACCCTACCTGGGTATGTACGTACGTACG
ACATATGAGCGAGCGTAGCGGGCGCGACGCGAAGCGTATGTGGCGCCCGA
GCTGTTTTCTCCTGAAGCATGGCGGCGGGACTCTTGGCATTATCAAGACG
CCAGTTTGCAACTACAGTAACAGAACTATATTTCAATCATGGAGCTCTGT
CCGCTTCGCATAATTTGATGTACTTTTCCTTCCTGAGCACGCGTAGCGGG
CGGCGTAGGCAGGCCGCCCGCGGAGCGAAGCTCTTTGTAAAGACTTACGA
ACGGGCGCAGCAAGTACTGTATAAGAGTGTTAATAGCAGCATGTTGCGTG
TGTGTCGTGCCCCTTGCATTGGTGCTTTTGTCCGGTTACCAAGAATATCA
TACTCGAACCAACCAGTGGCCGATGCTTATTCGTTGTCACTTATGTATGT
CATTGCTTGCAGCCCCTCTCTACTTTGTTCGCGTACGTCTGCCTAATCAA
AAGGCCGAAAGGGTTATTGTTAATAATAGTACTGTCCTATTGTACTTTAA
GTAGTATTAAGTATGCGAGTATTGATATCAAAGGCTGTACGTACGCGGTG
CCTTTATTGATAAGTCGTGCTGTATGACGTCAGCCGGCTGCGGTTGCTTT
CAGCCGTGGTTGCTATGTATATCGTATAGTGTTTGTAACGCCTGCGTAAC
GCCTTCGCAACCCTTTTGCAACCGTGCACGGCAGGTCATGACGACGGCCG
TTGTGACTGCGAAGGAGCCAGTGAGCCTAGAGGAGGCGAACGCTCTGCTC
AAGTCTAGTAAAAAGGGCAAGCTTCCCGTTATTGACACGGAAGGAAAGGT
A back to topCoding sequence (CDS) from alignment at M-pyrifera_M_contig8189:236..7036- >mRNA_M-pyrifera_M_contig8189.19160.1 ID=mRNA_M-pyrifera_M_contig8189.19160.1|Name=mRNA_M-pyrifera_M_contig8189.19160.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=1320bp|location=Sequence derived from alignment at M-pyrifera_M_contig8189:236..7036- (Macrocystis pyrifera P11B4 male) ATGGACCTCACCTTGGACTCCCGGGACGAGCAGCAGGCCAAGGAGGACGG GCCGGATGGGTTTTCCGCGACAACGATATTCAAATCTGCGGCTTGCTGCC AGGGCCTGACGTACGATGACGTCATCCTCATGCCAGATGGACCTCACCTT GGACTCCCGGGACGAGCAGCAGGCCAAGGAGGACGGGCCGGATGGGTTTT CCGCGACAACGATATTCAAATCTGCGGCTTGCTGCCAGGGCCTGACGTAC GATGACGTCATCCTCATGCCAGGTCACATCTCGTTCTCCGCTGAGGACAT TGAACTGGAGTCATGGGTAACGAGAAACATCAAGCTCAAGGTCACATCTC GTTCTCCGCTGAGGACATTGAACTGGAGTCATGGGTAACGAGAAACATCA AGCTCAAGACACCGCTCGTATCGTCTCCAATGGACACTGTCACGGAGGCT GCTATGGCCATACAGATGGCGCTGCACGGCGGCCTGGGCATCATTCACTA CAACATGCCCATTGACACCGCTCGTATCGTCTCCAATGGACACTGTCACG GAGGCTGCTATGGCCATACAGATGGCGCTGCACGGCGGCCTGGGCATCAT TCACTACAACATGCCCATTGCGGAACAGGCGGCGAACGTCCGAGAGGTGA AGCGTTACAAGAACGGTTTCATCATGGACCCCATCTGCCTCACGAAGGAC CACACCCGGAACAGGCGGCGAACGTCCGAGAGGTGAAGCGTTACAAGAAC GGTTTCATCATGGACCCCATCTGCCTCACGAAGGACCACACCGTCCAATA CATGCGGGATATGAAAACTCACCAATTTTTCAGCGGCATCCCCGTGACGG AAGACGGAAAGATTGGATCAAAGCTGCTCGGCATCGTCACTCGAAGAGAT ATCGACTTCATCGGCGACTCGTCCATCAAGCTCTCAGAGGTCCAATACAT GCGGGATATGAAAACTCACCAATTTTTCAGCGGCATCCCCGTGACGGAAG ACGGAAAGATTGGATCAAAGCTGCTCGGCATCGTCACTCGAAGAGATATC GACTTCATCGGCGACTCGTCCATCAAGCTCTCAGAGGTCATGACGACGGC CGTTGTGACTGCGAAGGAGCCAGTGAGCCTAGAGGAGGCGAACGCTCTGC TCAAGTCTAGTAAAAAGGGCAAGCTTCCCGTTATTGACACGGAAGGAAAG GTAGTCATGACGACGGCCGTTGTGACTGCGAAGGAGCCAGTGAGCCTAGA GGAGGCGAACGCTCTGCTCAAGTCTAGTAAAAAGGGCAAGCTTCCCGTTA TTGACACGGAAGGAAAGGTA back to top
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