mRNA_M-pyrifera_M_contig81874.19159.1 (mRNA) Macrocystis pyrifera P11B4 male
Overview
Homology
BLAST of mRNA_M-pyrifera_M_contig81874.19159.1 vs. uniprot
Match: A0A1Q5UHF2_9EURO (Splicing factor U2AF subunit n=5 Tax=Penicillium TaxID=5073 RepID=A0A1Q5UHF2_9EURO) HSP 1 Score: 62.0 bits (149), Expect = 4.330e-8 Identity = 55/189 (29.10%), Postives = 96/189 (50.79%), Query Frame = 1 Query: 22 IDDGAVEAVLSAFGDLSRCEVEEEGNGHARR--ALVQFANPSITDTAVEGLSGEIDLGAGNVILRRLRVSEASAA---------------------TGARIAVRLIHAATTEDIGAADDVEALLEDIADEAQRAGKVARCIAAVEDPRLHGPDPHTGMEGVVPVYIVFEDEQSASACVKLLGGRKFEGR 519 I + V +L +FG+L + ++ + R A ++A+P+ T AVEGL+G ++LG ++ + R + AA TG R+ ++L++ T +++ DD E +LED+ +E + GKV +++ PR G + GV +Y+ FE ++SAS+ +K L GRKF R Sbjct: 392 IPEEPVTMLLKSFGELKSFVLVKDASTEESRGIAFCEYADPTATTIAVEGLNG-MELGDRHLKVVRASIGTTQAAGLDMGVNAMSMFAKTTSQDMETG-RV-LQLLNMVTVDELLDNDDYEEILEDVQEECAKYGKVL----SLKIPRPTGGNRQAA--GVGKIYVKFETQESASSALKALAGRKFSDR 571
BLAST of mRNA_M-pyrifera_M_contig81874.19159.1 vs. uniprot
Match: A0A0C3HNY5_9PEZI (Splicing factor U2AF subunit n=1 Tax=Oidiodendron maius Zn TaxID=913774 RepID=A0A0C3HNY5_9PEZI) HSP 1 Score: 60.8 bits (146), Expect = 1.080e-7 Identity = 54/194 (27.84%), Postives = 98/194 (50.52%), Query Frame = 1 Query: 1 VAPLGPEIDDGAVEAVLSAFGDLSRCE-VEEEGNGHARR-ALVQFANPSITDTAVEGLSGEIDLGAGNVILRRLRV---------------SEASAATGARI----AVRLIHAATTEDIGAADDVEALLEDIADEAQRAGKVARCIAAVEDPRLHGPDPHTGMEGVVPVYIVFEDEQSASACVKLLGGRKFEGR 519 ++ L P + D V +L AFG+L V++ G +R A ++A+P+ TD AVEGL+G +++G ++ ++R + S ++ T A + ++L++ T E++ DD E + ED+ +E + GKV ++ PR G + GV +++ F+ +SA ++ L GRKF R Sbjct: 377 ISNLPPYLTDEQVTELLLAFGELKAFVLVKDNGTEESRGIAFCEYADPTKTDIAVEGLNG-MEIGDKHLTVQRASIGLTQVASLEMSVNAMSMLASTTSAGLEDGRVLQLLNMVTAEELIDNDDYEEIQEDVREECDKYGKVLE----MKIPRPTGGSRQSN--GVGKIFVKFDTPESAGKALRALAGRKFADR 563
BLAST of mRNA_M-pyrifera_M_contig81874.19159.1 vs. uniprot
Match: A0A0F4YUB3_TALEM (Splicing factor U2AF subunit n=1 Tax=Rasamsonia emersonii CBS 393.64 TaxID=1408163 RepID=A0A0F4YUB3_TALEM) HSP 1 Score: 59.3 bits (142), Expect = 3.630e-7 Identity = 56/188 (29.79%), Postives = 93/188 (49.47%), Query Frame = 1 Query: 22 IDDGAVEAVLSAFGDL-SRCEVEEEGNGHARR-ALVQFANPSITDTAVEGLSGEIDLGAGNVILRRLRVSEASAATGARIAV--------------------RLIHAATTEDIGAADDVEALLEDIADEAQRAGKVARCIAAVEDPRLHGPDPHTGMEGVVPVYIVFEDEQSASACVKLLGGRKFEGR 519 I + V +L +FG+L S V++ G +R A ++A+PS T AVEGL+G ++LG ++ + R + A+ A G + V +L++ T E++ DD E + ED+ DE + G+V ++ PR G + GV +Y+ F+ +SA+ +K L GRKF R Sbjct: 353 IPEEPVTMLLKSFGELKSFVLVKDSGTEESRGIAFCEYADPSATSIAVEGLNG-MELGDKHLKVTRASIG-ATQAAGLDMGVNAMSMFAKTTSQDLETSRVLQLLNMVTPEELMNNDDYEEIREDVQDECNKYGQVLE----LKIPRPTGGSRQS--PGVGKIYVKFDSVESATKALKALAGRKFSDR 532
BLAST of mRNA_M-pyrifera_M_contig81874.19159.1 vs. uniprot
Match: A0A507QLT3_MONPU (Splicing factor U2AF subunit n=1 Tax=Monascus purpureus TaxID=5098 RepID=A0A507QLT3_MONPU) HSP 1 Score: 59.3 bits (142), Expect = 3.640e-7 Identity = 57/195 (29.23%), Postives = 90/195 (46.15%), Query Frame = 1 Query: 22 IDDGAVEAVLSAFGDLSRCEVEEEGNGHARR--ALVQFANPSITDTAVEGLSGEIDLGAGNVILRRLRVSEASA----ATGARIAV--------------------RLIHAATTEDIGAADDVEALLEDIADEAQRAGKVARCIAAVEDPRLHGPDPHTG---MEGVVPVYIVFEDEQSASACVKLLGGRKFEGR 519 I + V +L +FG+L + ++ R A ++A+PS T AVEGL+G ++LG R L+V+ AS ATG + V +L++ T E++ DD E +++D+ DE + G + L P P TG GV +Y+ F+ +SA+ +K L GRKF R Sbjct: 360 IPEEPVTMLLKSFGELKSFVLVKDNATEESRGIAFCEYADPSATSIAVEGLNG-MELGD-----RHLKVTRASIGITQATGLDMGVNAMSMFAKTTSQDLETSRVLQLLNMVTPEELMDNDDYEEIMDDVRDECSKYGTILE---------LKIPRPTTGGRQSPGVGKIYVKFDSVKSATEALKALAGRKFSDR 539
BLAST of mRNA_M-pyrifera_M_contig81874.19159.1 vs. uniprot
Match: A0A232LT16_9EURO (Uncharacterized protein n=1 Tax=Elaphomyces granulatus TaxID=519963 RepID=A0A232LT16_9EURO) HSP 1 Score: 57.8 bits (138), Expect = 1.250e-6 Identity = 56/189 (29.63%), Postives = 95/189 (50.26%), Query Frame = 1 Query: 22 IDDGAVEAVLSAFGDL-SRCEVEEEGNGHARR-ALVQFANPSITDTAVEGLSGEIDLGAGNVILRRLRVS-EASAATGARIAV--------------------RLIHAATTEDIGAADDVEALLEDIADEAQRAGKVARCIAAVEDPRLHGPDPHTGMEGVVPVYIVFEDEQSASACVKLLGGRKFEGR 519 I + V+ +L +FG+L S V++ G +R A ++A+PS T AVEGL+G + G+ LR +R S A+ A G + V +L++ T E++ +DD + + +D+ +E + G+V ++ PR G + GV +Y+ F+D +SA+ +K L GRKF R Sbjct: 402 IPEEPVKMLLISFGELKSFVLVKDLGTDESRGVAFCEYADPSATTIAVEGLNG---MELGDKHLRVIRASIGATQAAGLDMGVNAMSMFAKTTSQDLETTRVLQLLNMVTPEELMNSDDYDEICDDVQEECSKYGEVLD----LKIPRPTGGSRQSA--GVGKIYVKFDDVESATKALKALAGRKFSDR 581
BLAST of mRNA_M-pyrifera_M_contig81874.19159.1 vs. uniprot
Match: W4JZH6_HETIT (Splicing factor U2AF subunit n=1 Tax=Heterobasidion irregulare (strain TC 32-1) TaxID=747525 RepID=W4JZH6_HETIT) HSP 1 Score: 55.1 bits (131), Expect = 9.940e-6 Identity = 56/208 (26.92%), Postives = 92/208 (44.23%), Query Frame = 1 Query: 1 VAPLGPEIDDGAVEAVLSAFGDLSRCE-VEEEGNGHARR-ALVQFANPSITDTAVEGLSGEIDLGAGNVILRRLRVSEASAATG--------------------------ARIAVRLIHAATTEDIGAADDVEALLEDIADEAQRAGKVARCIAAVEDPRLHGPDPHTG-------MEGVVPVYIVFEDEQSASACVKLLGGRKFEGR 519 V L +++ V +L +FG+L V E GNG ++ A ++ +PS+TD A++ LSG ++LG ++++R V + G ARI + +++ T +D+ + +L+DI +E G VED R+ P G GV VY+ + D A+A +K L GR F GR Sbjct: 228 VGGLPSYLNEEQVMELLKSFGELRAFNLVRENGNGASKGFAFFEYNDPSVTDVAIQSLSG-MELGDRYLVVQRASVGAKAGQPGIPNLPYDQFPEIPRPILPAGDLSTSDARILL-MLNMVTPDDLVDDQEYADILDDIREEVGNYG-------TVEDVRIPRPGAGIGDAQRADEASGVGRVYVKYTDSNGAAAAMKALAGRAFAGR 426
BLAST of mRNA_M-pyrifera_M_contig81874.19159.1 vs. uniprot
Match: A0A1L9SII9_9EURO (Splicing factor U2AF subunit n=1 Tax=Penicilliopsis zonata CBS 506.65 TaxID=1073090 RepID=A0A1L9SII9_9EURO) HSP 1 Score: 55.1 bits (131), Expect = 1.060e-5 Identity = 53/188 (28.19%), Postives = 92/188 (48.94%), Query Frame = 1 Query: 22 IDDGAVEAVLSAFGDLSRCEVEEEGNGHARR--ALVQFANPSITDTAVEGLSGEIDLGAGNVILRRLRVSEASAATGARIAV--------------------RLIHAATTEDIGAADDVEALLEDIADEAQRAGKVARCIAAVEDPRLHGPDPHTGMEGVVPVYIVFEDEQSASACVKLLGGRKFEGR 519 I + V +L +FG+L + ++ + R A ++A+PS T AVEGL+G ++LG ++ + R V A+ ATG + V +L++ T E++ DD E + +D+ DE + G+V ++ PR G + GV +++ F+ +SA+ +K L GRKF R Sbjct: 388 IPEEPVTMLLKSFGELKSFILVKDRSTEESRGIAFCEYADPSATAIAVEGLNG-MELGDRHLKIVRASVG-ATQATGLDMGVNAMSMFAKTTSNDLETTRVLQLLNMVTPEELLDNDDYEEICDDVRDECSKYGQVVD----LKVPRPTGGSRQSA--GVGKIFVRFDSVESATNALKALAGRKFSDR 567
BLAST of mRNA_M-pyrifera_M_contig81874.19159.1 vs. uniprot
Match: A0A6G1I6K8_9PEZI (Splicing factor U2AF subunit n=1 Tax=Trichodelitschia bisporula TaxID=703511 RepID=A0A6G1I6K8_9PEZI) HSP 1 Score: 54.7 bits (130), Expect = 1.410e-5 Identity = 50/188 (26.60%), Postives = 91/188 (48.40%), Query Frame = 1 Query: 22 IDDGAVEAVLSAFGDLSRCEVEEEGNGHARR--ALVQFANPSITDTAVEGLSGEIDLGAGNVILRRLRVSEASAATGARIAV--------------------RLIHAATTEDIGAADDVEALLEDIADEAQRAGKVARCIAAVEDPRLHGPDPHTGMEGVVPVYIVFEDEQSASACVKLLGGRKFEGR 519 + D V +L AFG+L + ++ + R A ++A+P++T+ AVEGL+G ++LG ++ ++R + AA G ++V +L++ T E++ D+ E + +D+ E ++ G V V+ PR G + G V +Y+ F +SA ++ L GRKF R Sbjct: 360 LTDNQVTELLVAFGELKAFVLVKDQSSEQSRGIAFCEYADPAVTEIAVEGLNG-MELGDDHLQVKRASIGVQQAA-GLEMSVNAMSMLAGTTATDLEQGRVIQLMNMVTAEELMDNDEYEEICDDVKTECEKFGPVLE----VKIPRPSGARTNPG---VGKIYVKFAAPESAQKAMRGLAGRKFADR 538
BLAST of mRNA_M-pyrifera_M_contig81874.19159.1 vs. uniprot
Match: D8UJ72_VOLCA (Uncharacterized protein n=1 Tax=Volvox carteri f. nagariensis TaxID=3068 RepID=D8UJ72_VOLCA) HSP 1 Score: 54.3 bits (129), Expect = 1.450e-5 Identity = 52/168 (30.95%), Postives = 80/168 (47.62%), Query Frame = 1 Query: 22 IDDGAVEAVLSAFGDLSRCEVEEEGNGHARRA--LVQFANPSITDTAVEGLSGEIDLGAGNVILRRLRVSEASAATGARIAVRLIHAATTEDIGAADDVEALLEDIADEAQRAGKVARCIAAVEDPRLH---GPDPHTGMEGVVPVYIVFEDEQSASACVKLLGGRKF 510 + + V +L AFG L + + + A + ++A+P+ITD A++GLS I +G + +RR + ++AT + + A D G D L+ED+ E + GK + VE PR GPDP GV VY+ +ED + A L GRKF Sbjct: 118 LSEEQVRQILQAFGPLRAFNLVTDRDTGASKGYGFCEYADPNITDVAIQGLSALI-VGGKPLTVRRANTAGEASATLQTLIQQQQAALDLVDDGEYMD---LMEDVTQEVGKYGK----LVGVEIPRPPPDGGPDP----PGVGFVYLCYEDPRGAERAQVALNGRKF 273
BLAST of mRNA_M-pyrifera_M_contig81874.19159.1 vs. uniprot
Match: A0A017SNU8_9EURO (Splicing factor U2AF subunit n=4 Tax=Aspergillus TaxID=5052 RepID=A0A017SNU8_9EURO) HSP 1 Score: 54.3 bits (129), Expect = 1.930e-5 Identity = 53/192 (27.60%), Postives = 91/192 (47.40%), Query Frame = 1 Query: 22 IDDGAVEAVLSAFGDLSRCEVEEEGNGHARR--ALVQFANPSITDTAVEGLSGEIDLGAGNVILRRLRVSEASA----ATGARIAV--------------------RLIHAATTEDIGAADDVEALLEDIADEAQRAGKVARCIAAVEDPRLHGPDPHTGMEGVVPVYIVFEDEQSASACVKLLGGRKFEGR 519 I + V +L +FG+L + ++G+ R A ++A+P+ T AVEGL+G ++LG R L+V AS A+G + V +L++ T E++ DD E + +D+ +E + G+ I V+ PR G + GV +++ F+ +S + +K L GRKF R Sbjct: 374 IPEEPVTMLLKSFGELKSFVLVKDGSTEESRGIAFCEYADPTATSIAVEGLNG-MELGD-----RHLKVVRASIGITQASGLDMGVNAMSMFAKTTSQDLETSRVLQLLNMVTPEELMDNDDYEEICDDVQEECSKYGQ----ILGVKIPRPSGGSRQSA--GVGKIFVKFDTVESTTNALKALAGRKFSDR 553 The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig81874.19159.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90) Total hits: 17
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_M-pyrifera_M_contig81874.19159.1 >prot_M-pyrifera_M_contig81874.19159.1 ID=prot_M-pyrifera_M_contig81874.19159.1|Name=mRNA_M-pyrifera_M_contig81874.19159.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=173bp VAPLGPEIDDGAVEAVLSAFGDLSRCEVEEEGNGHARRALVQFANPSITDback to top mRNA from alignment at M-pyrifera_M_contig81874:269..787- Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_M-pyrifera_M_contig81874.19159.1 ID=mRNA_M-pyrifera_M_contig81874.19159.1|Name=mRNA_M-pyrifera_M_contig81874.19159.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=519bp|location=Sequence derived from alignment at M-pyrifera_M_contig81874:269..787- (Macrocystis pyrifera P11B4 male)back to top Coding sequence (CDS) from alignment at M-pyrifera_M_contig81874:269..787- >mRNA_M-pyrifera_M_contig81874.19159.1 ID=mRNA_M-pyrifera_M_contig81874.19159.1|Name=mRNA_M-pyrifera_M_contig81874.19159.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=1038bp|location=Sequence derived from alignment at M-pyrifera_M_contig81874:269..787- (Macrocystis pyrifera P11B4 male)back to top |