mRNA_M-pyrifera_M_contig81873.19158.1 (mRNA) Macrocystis pyrifera P11B4 male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_M-pyrifera_M_contig81873.19158.1
Unique NamemRNA_M-pyrifera_M_contig81873.19158.1
TypemRNA
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Homology
BLAST of mRNA_M-pyrifera_M_contig81873.19158.1 vs. uniprot
Match: A0A518FX92_9PLAN (Putative chromosome-partitioning protein ParB n=9 Tax=Gimesia TaxID=1649453 RepID=A0A518FX92_9PLAN)

HSP 1 Score: 493 bits (1269), Expect = 2.080e-174
Identity = 261/273 (95.60%), Postives = 267/273 (97.80%), Query Frame = 1
Query:    1 APVQSSDQIDIDLIERNPYQPRQDFAAESLKELEGSIRQHGILQPLLVRPFDGAYQLIAGERRLKAAREAGLKTVPCRVLHLEEREVCEVAIEENLKRKDLNVLEKAQAFKNYLSQFDSTIEQLAQRLSLDRSTVNNMIRLLDLAEPVKQALQAEKISAGHARTLLSLDNDKQVALCEQIQSESLSVRKTEAEVRKILKGEADTVPFENPKPKQPADAPQMTNHLIDLQQQLREILGAQVEIKLKTEQSGQIVIPFDSNDTFERITGVLRKSA 819
            AP +SSDQIDIDLIERNPYQPRQDFAA+SLKELEGSIRQHGILQPLLVRPFDGAYQLIAGERRLKAAREAGLKTVPCRV+ LEEREVCEVAIEENLKRKDLNVLEKAQAFKNYLSQFDSTIEQLAQRLSLDRSTVNNMIRLLDLAEPVKQALQAEKISAGHARTLLSLDN+KQVALCEQIQSESLSVRKTEAEVRKILKGEADTVPFEN  PKQP+ APQMTNHL+DLQQQLREILGAQVEIKLKTE SGQIVIPFDSNDTFERITGVLRKSA
Sbjct:   63 APAESSDQIDIDLIERNPYQPRQDFAADSLKELEGSIRQHGILQPLLVRPFDGAYQLIAGERRLKAAREAGLKTVPCRVMQLEEREVCEVAIEENLKRKDLNVLEKAQAFKNYLSQFDSTIEQLAQRLSLDRSTVNNMIRLLDLAEPVKQALQAEKISAGHARTLLSLDNEKQVALCEQIQSESLSVRKTEAEVRKILKGEADTVPFENSNPKQPSAAPQMTNHLLDLQQQLREILGAQVEIKLKTEHSGQIVIPFDSNDTFERITGVLRKSA 335          
BLAST of mRNA_M-pyrifera_M_contig81873.19158.1 vs. uniprot
Match: A0A517VLC5_9PLAN (Putative chromosome-partitioning protein ParB n=9 Tax=Planctomycetaceae TaxID=126 RepID=A0A517VLC5_9PLAN)

HSP 1 Score: 466 bits (1198), Expect = 1.010e-163
Identity = 244/267 (91.39%), Postives = 261/267 (97.75%), Query Frame = 1
Query:   19 DQIDIDLIERNPYQPRQDFAAESLKELEGSIRQHGILQPLLVRPFDGAYQLIAGERRLKAAREAGLKTVPCRVLHLEEREVCEVAIEENLKRKDLNVLEKAQAFKNYLSQFDSTIEQLAQRLSLDRSTVNNMIRLLDLAEPVKQALQAEKISAGHARTLLSLDNDKQVALCEQIQSESLSVRKTEAEVRKILKGEADTVPFENPKPKQPADAPQMTNHLIDLQQQLREILGAQVEIKLKTEQSGQIVIPFDSNDTFERITGVLRKSA 819
            DQIDIDLIERNPYQPRQDFAA+S+KELEGSIRQHG+LQPLLVRPF+GAYQLIAGERRLKAAR+AGLKTVPCRV++LEER+VCEVAIEENLKRKDLNVLEKAQAFKNYLSQFDSTIEQLAQRLSLDRSTVNNMIRLLDLAEPVKQALQAEKISAGHARTLLSLD++KQ+A+CEQIQSESLSVRKTEAEVRKILKG+ DTVPFEN K  QPA APQMTNHL+DLQQQLREILGAQVEIKLKTE SGQI+IPFDSN++FERITGVLRKSA
Sbjct:   63 DQIDIDLIERNPYQPRQDFAADSIKELEGSIRQHGVLQPLLVRPFEGAYQLIAGERRLKAARDAGLKTVPCRVMNLEERQVCEVAIEENLKRKDLNVLEKAQAFKNYLSQFDSTIEQLAQRLSLDRSTVNNMIRLLDLAEPVKQALQAEKISAGHARTLLSLDSEKQIAVCEQIQSESLSVRKTEAEVRKILKGDVDTVPFENTK--QPASAPQMTNHLVDLQQQLREILGAQVEIKLKTEHSGQILIPFDSNESFERITGVLRKSA 327          
BLAST of mRNA_M-pyrifera_M_contig81873.19158.1 vs. uniprot
Match: A0A518IJI0_9PLAN (Putative chromosome-partitioning protein ParB n=2 Tax=Gimesia TaxID=1649453 RepID=A0A518IJI0_9PLAN)

HSP 1 Score: 457 bits (1175), Expect = 3.320e-160
Identity = 240/267 (89.89%), Postives = 256/267 (95.88%), Query Frame = 1
Query:   19 DQIDIDLIERNPYQPRQDFAAESLKELEGSIRQHGILQPLLVRPFDGAYQLIAGERRLKAAREAGLKTVPCRVLHLEEREVCEVAIEENLKRKDLNVLEKAQAFKNYLSQFDSTIEQLAQRLSLDRSTVNNMIRLLDLAEPVKQALQAEKISAGHARTLLSLDNDKQVALCEQIQSESLSVRKTEAEVRKILKGEADTVPFENPKPKQPADAPQMTNHLIDLQQQLREILGAQVEIKLKTEQSGQIVIPFDSNDTFERITGVLRKSA 819
            DQID+DLIERNPYQPRQDF A+SLKELEGSIRQHG+LQPLLVRPFDGAYQLIAGERRLKAAREAGLKTVPCRVL+LEER+VCEVAIEENLKRKDLNVLEKAQAFKNYLSQFDSTIEQLAQRLSLDRSTVNNMIRLLDLAEPVKQAL AEKISAGHARTLLSLD  +Q+++CEQIQSESLSVRKTEAEVRKILKGEADTVPFE+ K  +  + PQMTNHL+DLQQQLREILGAQVEIKLKT+ SGQI+IPFDSN+TFERITGVLRKSA
Sbjct:   64 DQIDVDLIERNPYQPRQDFEADSLKELEGSIRQHGVLQPLLVRPFDGAYQLIAGERRLKAAREAGLKTVPCRVLNLEERQVCEVAIEENLKRKDLNVLEKAQAFKNYLSQFDSTIEQLAQRLSLDRSTVNNMIRLLDLAEPVKQALHAEKISAGHARTLLSLDEQRQISMCEQIQSESLSVRKTEAEVRKILKGEADTVPFESTK--KTTETPQMTNHLVDLQQQLREILGAQVEIKLKTDHSGQILIPFDSNETFERITGVLRKSA 328          
BLAST of mRNA_M-pyrifera_M_contig81873.19158.1 vs. uniprot
Match: A0A517VQN3_9PLAN (Putative chromosome-partitioning protein ParB n=2 Tax=Gimesia aquarii TaxID=2527964 RepID=A0A517VQN3_9PLAN)

HSP 1 Score: 447 bits (1150), Expect = 2.120e-156
Identity = 236/267 (88.39%), Postives = 256/267 (95.88%), Query Frame = 1
Query:   19 DQIDIDLIERNPYQPRQDFAAESLKELEGSIRQHGILQPLLVRPFDGAYQLIAGERRLKAAREAGLKTVPCRVLHLEEREVCEVAIEENLKRKDLNVLEKAQAFKNYLSQFDSTIEQLAQRLSLDRSTVNNMIRLLDLAEPVKQALQAEKISAGHARTLLSLDNDKQVALCEQIQSESLSVRKTEAEVRKILKGEADTVPFENPKPKQPADAPQMTNHLIDLQQQLREILGAQVEIKLKTEQSGQIVIPFDSNDTFERITGVLRKSA 819
            D+IDI+LIERNPYQPRQDFA+ESLKELEGSIRQHGILQPLLVRPFDGAYQLIAGERRLKAAREAGLKTVPCRVL+LEER+VCEVAIEENLKRKDLNVLEKAQAFKNYLSQF+STIEQL+QRLSLDRSTVNNMIRLL+LAEPVKQALQ EKISAGHAR LLSL+ D+QVA+CEQIQ+ESLSVRKTEAEVRKI+KGEADTVPFEN K  +    P+MTNHL+DLQQQLREILGA+VEIKLKT+ SGQI+IPFDSN+TFERITGVLRKSA
Sbjct:   64 DEIDIELIERNPYQPRQDFASESLKELEGSIRQHGILQPLLVRPFDGAYQLIAGERRLKAAREAGLKTVPCRVLNLEERQVCEVAIEENLKRKDLNVLEKAQAFKNYLSQFNSTIEQLSQRLSLDRSTVNNMIRLLELAEPVKQALQNEKISAGHARALLSLEEDRQVAVCEQIQAESLSVRKTEAEVRKIIKGEADTVPFENAKKSKAV--PEMTNHLVDLQQQLREILGAKVEIKLKTDHSGQIMIPFDSNETFERITGVLRKSA 328          
BLAST of mRNA_M-pyrifera_M_contig81873.19158.1 vs. uniprot
Match: A0A836RBR8_9PLAN (ParB/RepB/Spo0J family partition protein n=1 Tax=Planctomycetaceae bacterium TaxID=2026779 RepID=A0A836RBR8_9PLAN)

HSP 1 Score: 324 bits (830), Expect = 3.250e-108
Identity = 174/266 (65.41%), Postives = 217/266 (81.58%), Query Frame = 1
Query:   22 QIDIDLIERNPYQPRQDFAAESLKELEGSIRQHGILQPLLVRPFDGAYQLIAGERRLKAAREAGLKTVPCRVLHLEEREVCEVAIEENLKRKDLNVLEKAQAFKNYLSQFDSTIEQLAQRLSLDRSTVNNMIRLLDLAEPVKQALQAEKISAGHARTLLSLDNDKQVALCEQIQSESLSVRKTEAEVRKILKGEADTVPFENPKPKQPADAPQMTNHLIDLQQQLREILGAQVEIKLKTEQSGQIVIPFDSNDTFERITGVLRKSA 819
            +ID+  I++NP+QPRQ     +L+EL  SI QHG+LQP LVRP +G YQL+AGERRL AA++AGL++VPCRVL LE+R V EVAIEENLKRKDLNVLEKAQAFK+YL +F+STIE+LA RLSLDRSTV+NM+RLLDLAEPVKQAL+ +KI+ GHAR LL L+   QVALCE+IQ ESLSVRKTEA VR +LK +  TVPF +  P   A+ P+ TNH++ L+ QLR++LG +V+I+LKT  SG+IVIPF S+D FERI G LR++A
Sbjct:   34 EIDVRAIQKNPFQPRQQLDESTLEELVQSIAQHGVLQPPLVRPHEGGYQLVAGERRLVAAQKAGLQSVPCRVLELEDRSVFEVAIEENLKRKDLNVLEKAQAFKDYLERFESTIEELAGRLSLDRSTVSNMLRLLDLAEPVKQALREDKITNGHARALLPLEEPDQVALCERIQKESLSVRKTEAAVRTLLKRDK-TVPFPDA-PTDKAEKPERTNHVVSLESQLRDLLGVKVQIELKTADSGRIVIPFASSDEFERILGFLRRAA 297          
BLAST of mRNA_M-pyrifera_M_contig81873.19158.1 vs. uniprot
Match: A0A4V0XMQ2_9BACT (Chromosome partitioning protein ParB n=2 Tax=Planctomycetes TaxID=203682 RepID=A0A4V0XMQ2_9BACT)

HSP 1 Score: 317 bits (812), Expect = 3.100e-105
Identity = 173/278 (62.23%), Postives = 222/278 (79.86%), Query Frame = 1
Query:    1 APVQSSDQIDIDLIERNPYQPRQDFAAESLKELEGSIRQHGILQPLLVRPF-DGAYQLIAGERRLKAAREAGLKTVPCRVLHLEEREVCEVAIEENLKRKDLNVLEKAQAFKNYLSQFDSTIEQLAQRLSLDRSTVNNMIRLLDLAEPVKQALQAEKISAGHARTLLSLDNDKQVALCEQIQSESLSVRKTEAEVRKIL---KGEADTVPFE-NPKPKQPADAPQMTNHLIDLQQQLREILGAQVEIKLKTEQSGQIVIPFDSNDTFERITGVLRKSA 819
            AP     Q+ ++ IERNPYQPR +F A SL+EL  SI+QHG+LQPLLVR   +G +QLIAGERRL AA++AGL TVPCR+L LEE++VCEVA+EENLKRKDLNVLEKAQAF NYL QF  TIE+L+++LSLDRSTV+N++RLLDLAEPVKQ+L+++KI+ GHAR LLSL  ++Q+ LC++I+SESLSVR TEA VR++L   K  A+TV F+   KPK     P  T+H++ LQ QLR++LG  VEIKL+ ++SGQI+I F SND FER+  VLR++A
Sbjct:   42 APQGELRQMPVNSIERNPYQPRTEFEASSLRELSDSIQQHGVLQPLLVRALPNGGWQLIAGERRLMAAKQAGLATVPCRILELEEQQVCEVALEENLKRKDLNVLEKAQAFANYLQQFGRTIEELSKQLSLDRSTVSNLLRLLDLAEPVKQSLRSDKITGGHARALLSLSTEQQIVLCQKIESESLSVRATEAAVRELLAESKSNAETVAFDPQHKPK-----PTATHHVLSLQGQLRDLLGVPVEIKLRGKESGQILITFGSNDDFERVLRVLRRAA 314          
BLAST of mRNA_M-pyrifera_M_contig81873.19158.1 vs. uniprot
Match: A0A5C9CHT8_9BACT (Chromosome partitioning protein ParB family n=1 Tax=Planctomycetes bacterium TaxID=2026780 RepID=A0A5C9CHT8_9BACT)

HSP 1 Score: 315 bits (808), Expect = 1.250e-104
Identity = 172/271 (63.47%), Postives = 218/271 (80.44%), Query Frame = 1
Query:   22 QIDIDLIERNPYQPRQDFAAESLKELEGSIRQHGILQPLLVRPF-DGAYQLIAGERRLKAAREAGLKTVPCRVLHLEEREVCEVAIEENLKRKDLNVLEKAQAFKNYLSQFDSTIEQLAQRLSLDRSTVNNMIRLLDLAEPVKQALQAEKISAGHARTLLSLDNDKQVALCEQIQSESLSVRKTEAEVRKIL---KGEADTVPFENP-KPKQPADAPQMTNHLIDLQQQLREILGAQVEIKLKTEQSGQIVIPFDSNDTFERITGVLRKSA 819
            Q+ ++ IERNPYQPR +F A SL+EL  SI+QHG+LQPLLVR   +G +QL+AGERRL AA++AGL TVPCRVL LEE++VCEVA+EENLKRKDLNVLEKAQAF NYL QF  TIE+LA++LSLDRSTV+NM+RLLDLAEPVKQ+L+++KIS GHAR LLSL  ++Q+ALC++I+S +LSVR TEA VR++L   K + D V F+   KPK     P  T H++ LQ QLR++LG  VEIKL+ ++SGQIVI F SND FER+  V+R++A
Sbjct:   49 QMPVNAIERNPYQPRTEFEASSLRELSDSIQQHGVLQPLLVRALPNGDWQLVAGERRLMAAKQAGLATVPCRVLELEEQQVCEVALEENLKRKDLNVLEKAQAFANYLQQFGRTIEELAKQLSLDRSTVSNMLRLLDLAEPVKQSLRSDKISGGHARALLSLSAEQQIALCQRIESGALSVRATEAAVRELLAESKTDTDIVAFDPAYKPK-----PTATQHVVSLQSQLRDLLGVPVEIKLRGKESGQIVITFSSNDDFERVLRVMRRAA 314          
BLAST of mRNA_M-pyrifera_M_contig81873.19158.1 vs. uniprot
Match: A0A7W0RNQ1_9PLAN (ParB/RepB/Spo0J family partition protein n=1 Tax=Planctomycetaceae bacterium TaxID=2026779 RepID=A0A7W0RNQ1_9PLAN)

HSP 1 Score: 307 bits (786), Expect = 2.020e-101
Identity = 168/270 (62.22%), Postives = 213/270 (78.89%), Query Frame = 1
Query:   25 IDIDLIERNPYQPRQDFAAESLKELEGSIRQHGILQPLLVRPFDGAYQLIAGERRLKAAREAGLKTVPCRVLHLEEREVCEVAIEENLKRKDLNVLEKAQAFKNYLSQFDSTIEQLAQRLSLDRSTVNNMIRLLDLAEPVKQALQAEKISAGHARTLLSLDNDKQVALCEQIQSESLSVRKTEAEVRKILKGEADTVPFENPKPKQPADA-----PQMTNHLIDLQQQLREILGAQVEIKLKTEQSGQIVIPFDSNDTFERITGVLRKSA 819
            I I+LIERNP+QPR+DF  E L EL  SI+QHG+LQPLLVRP +G+YQLIAGERR+ A++ AG +TVPCRVL LE+++VC VAIEENLKRKDLNVLEKAQAFK YL +F+STIE+LA  LSL+RSTV+N IRLLDLAEPVKQA++ +KISAGHAR LL+L +++QV LC++   E+L+VR  E  VR+ L+G A TVPF  P+ +Q         P +TNH++ + QQLR+ LGA+VEIKL+ +  G+IVI FD+ND FERI   LR +A
Sbjct:   38 IHIELIERNPFQPRKDFDEEGLTELAESIKQHGVLQPLLVRPHNGSYQLIAGERRMLASKRAGFETVPCRVLELEDKQVCAVAIEENLKRKDLNVLEKAQAFKEYLDRFNSTIEELAATLSLNRSTVSNFIRLLDLAEPVKQAIRDDKISAGHARALLTLSHEEQVDLCKRATKENLTVRAVEQAVRE-LQGRA-TVPFPTPEGEQAPQEQAIGDPNLTNHILSIAQQLRDQLGAKVEIKLRGKDKGRIVIDFDTNDEFERIVRHLRAAA 305          
BLAST of mRNA_M-pyrifera_M_contig81873.19158.1 vs. uniprot
Match: A0A7C4LMH8_9PLAN (ParB/RepB/Spo0J family partition protein n=1 Tax=Schlesneria paludicola TaxID=360056 RepID=A0A7C4LMH8_9PLAN)

HSP 1 Score: 298 bits (764), Expect = 4.380e-98
Identity = 161/266 (60.53%), Postives = 208/266 (78.20%), Query Frame = 1
Query:   25 IDIDLIERNPYQPRQDFAAESLKELEGSIRQHGILQPLLVRPFDGAYQLIAGERRLKAAREAGLKTVPCRVLHLEEREVCEVAIEENLKRKDLNVLEKAQAFKNYLSQFDSTIEQLAQRLSLDRSTVNNMIRLLDLAEPVKQALQAEKISAGHARTLLSLDNDKQVALCEQIQSESLSVRKTEAEVRKILKGEADTVPFE-NPKPKQPADAPQMTNHLIDLQQQLREILGAQVEIKLKTEQSGQIVIPFDSNDTFERITGVLRKSA 819
            I +DLIERNP+QPR DF  E+L EL  SIRQHG+LQPLLVRP    YQL+AGERRL AA++AGL+ VPCRVL L +R+VCEV++EENLKR+DLNVLEKA AF++YL +F   IE+LA+RLSLDRSTV+NM+RLLDL E +K  ++  +++AGHAR LLSL   +Q+ L  +I++E  SVRKTE  VR  L+  A+T+P      P++ +  PQ+TNHL+ LQ QLRE LGA+VEIKLK +++G+IVI F SND FER+ G+LRK+A
Sbjct:   41 IHVDLIERNPFQPRVDFDQEALNELVDSIRQHGVLQPLLVRPMGETYQLVAGERRLLAAKKAGLEVVPCRVLELSDRQVCEVSLEENLKRQDLNVLEKAAAFQDYLQKFQCPIEELARRLSLDRSTVSNMLRLLDLPEAIKADVRGGQLTAGHARALLSLPEPQQLELAAKIRAEGWSVRKTEDAVRG-LQPPAETIPISAGETPRKKSKTPQLTNHLLSLQDQLREWLGAKVEIKLKGKEAGRIVIEFTSNDDFERLLGLLRKAA 305          
BLAST of mRNA_M-pyrifera_M_contig81873.19158.1 vs. uniprot
Match: A0A517R4G5_9BACT (Putative chromosome-partitioning protein ParB n=1 Tax=Planctomycetes bacterium Pan189 TaxID=2527980 RepID=A0A517R4G5_9BACT)

HSP 1 Score: 297 bits (760), Expect = 4.560e-97
Identity = 162/285 (56.84%), Postives = 216/285 (75.79%), Query Frame = 1
Query:   16 SDQIDIDLIERNPYQPRQDFAAESLKELEGSIRQHGILQPLLVRPFDGAYQLIAGERRLKAAREAGLKTVPCRVLHLEEREVCEVAIEENLKRKDLNVLEKAQAFKNYLSQFDSTIEQLAQRLSLDRSTVNNMIRLLDLAEPVKQALQAEKISAGHARTLLSLDNDKQVALCEQIQSESLSVRKTEAEVRKIL-KGEADT----------VPFENPKPK------QPADAPQMTNHLIDLQQQLREILGAQVEIKLKTEQSGQIVIPFDSNDTFERITGVLRKSA 819
            S+ I ++LI+RNP+QPR+DF    + EL  SIR+HG+LQPLLVRP +G YQLIAGERRL AAR+ GL+TVPCRVL +E+R VCEVAIEENLKRKDLNVLEKAQAF++Y+ +FDST+E+LAQ L L+RSTV+N IRLLDL EPVK++++ ++IS GHA+ LL+LD D+QVALC+QI  E LSVR TE  VR++  +GE+ T          V  E P P       + AD P MT+H+  +  QLR++LG +VEIK++ + +G+I+I F++++ FERI G LR +A
Sbjct:   50 SNHIHVELIDRNPFQPRKDFGEPEIIELATSIRRHGVLQPLLVRPAEGQYQLIAGERRLMAARQVGLETVPCRVLEVEDRLVCEVAIEENLKRKDLNVLEKAQAFRDYIDRFDSTVEELAQNLGLNRSTVSNYIRLLDLTEPVKRSIRKDEISNGHAKALLTLDADEQVALCKQIAKEGLSVRATEKAVRELQGRGESATEAQTDEAAAGVEGEEPNPDVLPMNPEGADDPHMTSHVQSIVDQLRDMLGTKVEIKMRGKDAGKIMIDFNTSEEFERIVGHLRSAA 334          
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig81873.19158.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A518FX92_9PLAN2.080e-17495.60Putative chromosome-partitioning protein ParB n=9 ... [more]
A0A517VLC5_9PLAN1.010e-16391.39Putative chromosome-partitioning protein ParB n=9 ... [more]
A0A518IJI0_9PLAN3.320e-16089.89Putative chromosome-partitioning protein ParB n=2 ... [more]
A0A517VQN3_9PLAN2.120e-15688.39Putative chromosome-partitioning protein ParB n=2 ... [more]
A0A836RBR8_9PLAN3.250e-10865.41ParB/RepB/Spo0J family partition protein n=1 Tax=P... [more]
A0A4V0XMQ2_9BACT3.100e-10562.23Chromosome partitioning protein ParB n=2 Tax=Planc... [more]
A0A5C9CHT8_9BACT1.250e-10463.47Chromosome partitioning protein ParB family n=1 Ta... [more]
A0A7W0RNQ1_9PLAN2.020e-10162.22ParB/RepB/Spo0J family partition protein n=1 Tax=P... [more]
A0A7C4LMH8_9PLAN4.380e-9860.53ParB/RepB/Spo0J family partition protein n=1 Tax=S... [more]
A0A517R4G5_9BACT4.560e-9756.84Putative chromosome-partitioning protein ParB n=1 ... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig81873contigM-pyrifera_M_contig81873:3..824 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-19
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Properties
Property NameValue
Taxonomic scopeBacteria
Seed ortholog score472.6
Seed ortholog evalue1.2e-130
Seed eggNOG ortholog344747.PM8797T_13560
KEGG koko:K03497
Hectar predicted targeting categoryother localisation
EggNOG free text desc.Belongs to the ParB family
EggNOG OGs2IZ6I@203682,COG1475@1,COG1475@2
COG Functional cat.K
Best tax levelPlanctomycetes
Best eggNOG OGNA|NA|NA
BRITEko00000,ko03000,ko03036,ko04812
Exons1
Model size822
Cds size822
Stop1
Start0
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622816726.0333447-CDS-M-pyrifera_M_contig81873:2..8241622816726.0333447-CDS-M-pyrifera_M_contig81873:2..824Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig81873 3..824 +
1692278142.7377849-CDS-M-pyrifera_M_contig81873:2..8241692278142.7377849-CDS-M-pyrifera_M_contig81873:2..824Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig81873 3..824 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig81873.19158.1prot_M-pyrifera_M_contig81873.19158.1Macrocystis pyrifera P11B4 malepolypeptideM-pyrifera_M_contig81873 3..824 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_M-pyrifera_M_contig81873.19158.1

>prot_M-pyrifera_M_contig81873.19158.1 ID=prot_M-pyrifera_M_contig81873.19158.1|Name=mRNA_M-pyrifera_M_contig81873.19158.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=274bp
APVQSSDQIDIDLIERNPYQPRQDFAAESLKELEGSIRQHGILQPLLVRP
FDGAYQLIAGERRLKAAREAGLKTVPCRVLHLEEREVCEVAIEENLKRKD
LNVLEKAQAFKNYLSQFDSTIEQLAQRLSLDRSTVNNMIRLLDLAEPVKQ
ALQAEKISAGHARTLLSLDNDKQVALCEQIQSESLSVRKTEAEVRKILKG
EADTVPFENPKPKQPADAPQMTNHLIDLQQQLREILGAQVEIKLKTEQSG
QIVIPFDSNDTFERITGVLRKSA*
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mRNA from alignment at M-pyrifera_M_contig81873:3..824+

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_M-pyrifera_M_contig81873.19158.1 ID=mRNA_M-pyrifera_M_contig81873.19158.1|Name=mRNA_M-pyrifera_M_contig81873.19158.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=822bp|location=Sequence derived from alignment at M-pyrifera_M_contig81873:3..824+ (Macrocystis pyrifera P11B4 male)
GCACCAGTTCAGTCCTCCGACCAGATCGACATTGATCTGATCGAACGGAA TCCGTATCAGCCTCGTCAGGATTTCGCAGCGGAATCCCTCAAGGAACTCG AAGGCAGTATCCGTCAACACGGTATTCTGCAACCGCTGCTGGTCCGTCCG TTCGATGGTGCCTATCAGCTGATCGCCGGGGAACGCCGTTTGAAGGCAGC CCGTGAAGCGGGACTGAAAACGGTTCCCTGCCGGGTGCTCCATCTGGAAG AACGCGAAGTCTGTGAAGTCGCGATCGAGGAGAACCTCAAGCGAAAAGAT TTGAATGTACTCGAAAAGGCCCAGGCCTTCAAAAACTATCTGAGCCAGTT CGACAGTACGATCGAGCAGCTCGCACAGCGATTGAGTCTGGACCGTTCGA CCGTCAATAACATGATCCGGTTGCTCGATCTGGCGGAACCCGTCAAGCAG GCTCTCCAGGCAGAGAAGATCTCAGCCGGTCATGCCCGGACCCTGTTGAG CCTGGATAACGATAAACAGGTCGCCCTCTGTGAGCAGATTCAGTCCGAGT CCCTCTCGGTCCGAAAAACTGAAGCTGAGGTGCGGAAGATCCTCAAAGGT GAAGCTGACACCGTGCCCTTTGAGAATCCCAAACCGAAGCAACCCGCTGA TGCTCCCCAGATGACGAATCACCTGATTGACCTGCAGCAGCAACTGCGGG AAATTCTGGGAGCCCAAGTGGAGATCAAACTCAAGACCGAACAGTCCGGT CAGATTGTGATTCCCTTCGATTCGAACGATACCTTCGAGCGGATTACTGG AGTGCTCCGCAAGTCGGCCTGA
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Coding sequence (CDS) from alignment at M-pyrifera_M_contig81873:3..824+

>mRNA_M-pyrifera_M_contig81873.19158.1 ID=mRNA_M-pyrifera_M_contig81873.19158.1|Name=mRNA_M-pyrifera_M_contig81873.19158.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=1644bp|location=Sequence derived from alignment at M-pyrifera_M_contig81873:3..824+ (Macrocystis pyrifera P11B4 male)
GCACCAGTTCAGTCCTCCGACCAGATCGACATTGATCTGATCGAACGGAA
TCCGTATCAGCCTCGTCAGGATTTCGCAGCGGAATCCCTCAAGGAACTCG
AAGGCAGTATCCGTCAACACGGTATTCTGCAACCGCTGCTGGTCCGTCCG
TTCGATGGTGCCTATCAGCTGATCGCCGGGGAACGCCGTTTGAAGGCAGC
CCGTGAAGCGGGACTGAAAACGGTTCCCTGCCGGGTGCTCCATCTGGAAG
AACGCGAAGTCTGTGAAGTCGCGATCGAGGAGAACCTCAAGCGAAAAGAT
TTGAATGTACTCGAAAAGGCCCAGGCCTTCAAAAACTATCTGAGCCAGTT
CGACAGTACGATCGAGCAGCTCGCACAGCGATTGAGTCTGGACCGTTCGA
CCGTCAATAACATGATCCGGTTGCTCGATCTGGCGGAACCCGTCAAGCAG
GCTCTCCAGGCAGAGAAGATCTCAGCCGGTCATGCCCGGACCCTGTTGAG
CCTGGATAACGATAAACAGGTCGCCCTCTGTGAGCAGATTCAGTCCGAGT
CCCTCTCGGTCCGAAAAACTGAAGCTGAGGTGCGGAAGATCCTCAAAGGT
GAAGCTGACACCGTGCCCTTTGAGAATCCCAAACCGAAGCAACCCGCTGA
TGCTCCCCAGATGACGAATCACCTGATTGACCTGCAGCAGCAACTGCGGG
AAATTCTGGGAGCCCAAGTGGAGATCAAACTCAAGACCGAACAGTCCGGT
CAGATTGTGATTCCCTTCGATTCGAACGATACCTTCGAGCGGATTACTGG
AGTGCTCCGCAAGTCGGCCTGAGCACCAGTTCAGTCCTCCGACCAGATCG
ACATTGATCTGATCGAACGGAATCCGTATCAGCCTCGTCAGGATTTCGCA
GCGGAATCCCTCAAGGAACTCGAAGGCAGTATCCGTCAACACGGTATTCT
GCAACCGCTGCTGGTCCGTCCGTTCGATGGTGCCTATCAGCTGATCGCCG
GGGAACGCCGTTTGAAGGCAGCCCGTGAAGCGGGACTGAAAACGGTTCCC
TGCCGGGTGCTCCATCTGGAAGAACGCGAAGTCTGTGAAGTCGCGATCGA
GGAGAACCTCAAGCGAAAAGATTTGAATGTACTCGAAAAGGCCCAGGCCT
TCAAAAACTATCTGAGCCAGTTCGACAGTACGATCGAGCAGCTCGCACAG
CGATTGAGTCTGGACCGTTCGACCGTCAATAACATGATCCGGTTGCTCGA
TCTGGCGGAACCCGTCAAGCAGGCTCTCCAGGCAGAGAAGATCTCAGCCG
GTCATGCCCGGACCCTGTTGAGCCTGGATAACGATAAACAGGTCGCCCTC
TGTGAGCAGATTCAGTCCGAGTCCCTCTCGGTCCGAAAAACTGAAGCTGA
GGTGCGGAAGATCCTCAAAGGTGAAGCTGACACCGTGCCCTTTGAGAATC
CCAAACCGAAGCAACCCGCTGATGCTCCCCAGATGACGAATCACCTGATT
GACCTGCAGCAGCAACTGCGGGAAATTCTGGGAGCCCAAGTGGAGATCAA
ACTCAAGACCGAACAGTCCGGTCAGATTGTGATTCCCTTCGATTCGAACG
ATACCTTCGAGCGGATTACTGGAGTGCTCCGCAAGTCGGCCTGA
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