mRNA_M-pyrifera_M_contig81664.19120.1 (mRNA) Macrocystis pyrifera P11B4 male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_M-pyrifera_M_contig81664.19120.1
Unique NamemRNA_M-pyrifera_M_contig81664.19120.1
TypemRNA
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Homology
BLAST of mRNA_M-pyrifera_M_contig81664.19120.1 vs. uniprot
Match: A0A7X5WLX8_9ACTN (Histidine kinase (Fragment) n=1 Tax=Actinomycetia bacterium TaxID=1883427 RepID=A0A7X5WLX8_9ACTN)

HSP 1 Score: 402 bits (1033), Expect = 1.990e-137
Identity = 220/307 (71.66%), Postives = 240/307 (78.18%), Query Frame = 1
Query:    1 LFGLATIVVGGIYAGVARGLEKQEVSRTEEWVTFFRDARGQPSVATVEVEVQDYLLLFEQAVNEEALDQLRTYAFGALGLLFVGSLVVGWFVSGLVLRPVGRITGVAKEIEATDLSRRIDLDGPDDELKELADTFDGMLARIDEAFASQREFIHEASHELRNPLADIRTNIDVTLDDPDATTDDLRATSEVVGRSAERMSTLVDDLLLYARHGTRPTRREDVDLVDQVRDLVEEFGAAAEANGLTLVADVAAHELPVRGDGQAIHRAAANLVANAVRLAPSGTTVTVAAADXXXXXXXXXXXXXPGI 921
            LFGLAT+VVGGIYAGVAR LE Q+VSRTEEWVTFFRD  GQ  + TV+VEV DYL LFE++VNE+ALDQLRTYAFGALGLLF+GSL VGWFV+GLVLRPVGRIT VA++IEA DLSRRI+L GPDDELK+LADTFDGML R+DEAF SQREFIHEASHELRNPLA IRTN+DV LDDPDA+ DDLR+  EVVGRSAERMSTLV +                      VRDLV+EF A AEANGL LVADV   ELPV GD  A+HRAAANLVANAVRLAP GTTVTVAA D             PGI
Sbjct:   32 LFGLATVVVGGIYAGVARSLEDQDVSRTEEWVTFFRDRSGQAGIGTVQVEVPDYLALFERSVNEQALDQLRTYAFGALGLLFIGSLFVGWFVAGLVLRPVGRITSVARDIEANDLSRRIELQGPDDELKQLADTFDGMLGRLDEAFESQREFIHEASHELRNPLAVIRTNVDVGLDDPDASIDDLRSVGEVVGRSAERMSTLVTE----------------------VRDLVQEFAATAEANGLALVADVPEGELPVVGDPAALHRAAANLVANAVRLAPEGTTVTVAAGDEGRWVTLSVIDEGPGI 316          
BLAST of mRNA_M-pyrifera_M_contig81664.19120.1 vs. uniprot
Match: A0A2D6U617_9ACTN (Histidine kinase n=6 Tax=Acidimicrobiaceae bacterium TaxID=2024894 RepID=A0A2D6U617_9ACTN)

HSP 1 Score: 378 bits (970), Expect = 3.500e-127
Identity = 199/289 (68.86%), Postives = 232/289 (80.28%), Query Frame = 1
Query:    1 LFGLATIVVGGIYAGVARGLEKQEVSRTEEWVTFFRDARGQPSVATVEVEVQDYLLLFEQAVNEEALDQLRTYAFGALGLLFVGSLVVGWFVSGLVLRPVGRITGVAKEIEATDLSRRIDLDGPDDELKELADTFDGMLARIDEAFASQREFIHEASHELRNPLADIRTNIDVTLDDPDATTDDLRATSEVVGRSAERMSTLVDDLLLYARHGTRPTRREDVDLVDQVRDLVEEFGAAAEANGLTLVADVAAHELPVRGDGQAIHRAAANLVANAVRLAPSGTTVTVAA 867
            LFGLAT+VVGGIYAG+AR LE Q+VSRTE     FRDA G+  + T+E EVQD L +FE+ VNE+ALDQLRTYAFGALGLLF+GSL VGWFV+GLVLRPVGRIT VA+EI  TDLSRRI+L+GPDDELK+LADTFD ML R+DEAF +QR+FIHEASHELRNPLA IRTN+DV L DP+A  ++ R   EVVGRSAERM+TLVDDLL+YARHGTR  R E+ DL   V  L +EF A A++ GL L   + A  LPV GD  A+ RA ANL+ANAVRLAP+GT VTV+A
Sbjct:   37 LFGLATVVVGGIYAGLARSLEDQDVSRTEAAAVLFRDADGRDMIRTLEFEVQDPLAVFEREVNEQALDQLRTYAFGALGLLFIGSLGVGWFVAGLVLRPVGRITSVAREISGTDLSRRIELEGPDDELKQLADTFDDMLTRLDEAFENQRDFIHEASHELRNPLAVIRTNLDVVLSDPNAEAEEFRLAGEVVGRSAERMTTLVDDLLVYARHGTRAIREEEFDLAQLVSHLADEFAAPADSAGLVLTKQLPAEVLPVCGDAPAVRRAVANLIANAVRLAPAGTNVTVSA 325          
BLAST of mRNA_M-pyrifera_M_contig81664.19120.1 vs. uniprot
Match: A0A3M2GWC6_ACTSX (Histidine kinase n=1 Tax=Actinomyces sp. TaxID=29317 RepID=A0A3M2GWC6_ACTSX)

HSP 1 Score: 359 bits (921), Expect = 1.370e-119
Identity = 201/307 (65.47%), Postives = 225/307 (73.29%), Query Frame = 1
Query:    1 LFGLATIVVGGIYAGVARGLEKQEVSRTEEWVTFFRDARGQPSVATVEVEVQDYLLLFEQAVNEEALDQLRTYAFGALGLLFVGSLVVGWFVSGLVLRPVGRITGVAKEIEATDLSRRIDLDGPDDELKELADTFDGMLARIDEAFASQREFIHEASHELRNPLADIRTNIDVTLDDPDATTDDLRATSEVVGRSAERMSTLVDDLLLYARHGTRPTRREDVDLVDQVRDLVEEFGAAAEANGLTLVADVAAHELPVRGDGQAIHRAAANLVANAVRLAPSGTTVTVAAADXXXXXXXXXXXXXPGI 921
            LFGLA +VVGGIYAG++R L+ + +SRTE+ +  FR   G P +  V+VEV DYL  FE+ VN  ALDQLRTYAFGALG LFV SL VGWFV+G+V+RPVGRIT VA+EI+ATDLSRRI LDG DDELK+LADTFD ML R+DEAF SQR FIHEASHELRNPLA IRTN+DV L DPDA T+DLR   EVV RSAERMSTLVDDLL YAR G RPTR E  DL   V DL  EF A AEA GLTL       EL + GD  A+ RA ANL+ANAVRLAP+GT VTVAA               PGI
Sbjct:   44 LFGLAAVVVGGIYAGLSRSLDDEPLSRTEQAIAIFRHPDGTPVLGIVDVEVPDYLARFEREVNARALDQLRTYAFGALGALFVASLGVGWFVAGIVVRPVGRITAVAREIQATDLSRRIRLDGADDELKQLADTFDEMLGRLDEAFESQRRFIHEASHELRNPLAVIRTNVDVVLGDPDADTEDLRRAGEVVARSAERMSTLVDDLLAYARLGQRPTREETFDLGAVVDDLGAEFAAPAEAAGLTLEVRRPPGELRICGDAPAVRRAVANLLANAVRLAPAGTRVTVAAGRDDAWAWVSVTDEGPGI 350          
BLAST of mRNA_M-pyrifera_M_contig81664.19120.1 vs. uniprot
Match: A0A358A559_9ACTN (Sensor histidine kinase (Fragment) n=1 Tax=Acidimicrobiaceae bacterium TaxID=2024894 RepID=A0A358A559_9ACTN)

HSP 1 Score: 308 bits (789), Expect = 1.820e-102
Identity = 158/211 (74.88%), Postives = 184/211 (87.20%), Query Frame = 1
Query:    1 LFGLATIVVGGIYAGVARGLEKQEVSRTEEWVTFFRDARGQPSVATVEVEVQDYLLLFEQAVNEEALDQLRTYAFGALGLLFVGSLVVGWFVSGLVLRPVGRITGVAKEIEATDLSRRIDLDGPDDELKELADTFDGMLARIDEAFASQREFIHEASHELRNPLADIRTNIDVTLDDPDATTDDLRATSEVVGRSAERMSTLVDDLLLYAR 633
            LFGLAT+VVGGIYAG+AR LE Q+VSRTE     FRDA G+  + T+E EVQD L +FE+ VNE+ALDQLRTYAFGALGLLF+GSL VGWFV+GLVLRPVGRIT VA+EI  TDLSRRI+L+GPDDELK+LADTFD ML+R+DEAF +QR+FIHEASHELRNPLA IRTN+DV L DP+A T++LR+  EVVGRSAERM+TLVDDLL+YAR
Sbjct:   19 LFGLATVVVGGIYAGLARSLEDQDVSRTEAAAVLFRDADGRDMIRTLEFEVQDPLAVFEREVNEQALDQLRTYAFGALGLLFIGSLGVGWFVAGLVLRPVGRITSVAREISGTDLSRRIELEGPDDELKQLADTFDDMLSRLDEAFENQRDFIHEASHELRNPLAVIRTNLDVVLSDPNADTEELRSAGEVVGRSAERMTTLVDDLLVYAR 229          
BLAST of mRNA_M-pyrifera_M_contig81664.19120.1 vs. uniprot
Match: A0A7Y2DFE3_9ACTN (Histidine kinase n=1 Tax=Acidimicrobiales bacterium TaxID=2201156 RepID=A0A7Y2DFE3_9ACTN)

HSP 1 Score: 289 bits (740), Expect = 4.620e-92
Identity = 162/307 (52.77%), Postives = 204/307 (66.45%), Query Frame = 1
Query:    1 LFGLATIVVGGIYAGVARGLEKQEVSRTEEWVTFFRDARGQPSVATVEVEVQDYLLLFEQAVNEEALDQLRTYAFGALGLLFVGSLVVGWFVSGLVLRPVGRITGVAKEIEATDLSRRIDLDGPDDELKELADTFDGMLARIDEAFASQREFIHEASHELRNPLADIRTNIDVTLDDPDATTDDLRATSEVVGRSAERMSTLVDDLLLYARHGTRPTRREDVDLVDQVRDLVEEFGAAAEANGLTLVADVAAHELPVRGDGQAIHRAAANLVANAVRLAPSGTTVTVAAADXXXXXXXXXXXXXPGI 921
            LFGLA +VVGGIYAG+++ L+ Q +S+ +     F    G P +   E EV++ L  FE+ VN  ALD+LR Y+F ALGLLFVGSL VGWFV+ +VLRP+ RITGVA+EI+ATDL RRI+L GP+DEL++LADTFD MLAR+D+AF  QR FIHE SHELRNPLA +RTN+DV   DP AT +D R  SEV+GR+AERM+ LVDDLLLYAR      R E VD    V + V E+ A+AEA  + L+         V+GD  A+ RA ANL+ NA+R  P    + VA+               PGI
Sbjct:   46 LFGLAAVVVGGIYAGLSQALDSQPISQRDRQSRVFETEAG-PIIIQTEREVENELAEFEREVNTAALDKLRNYSFAALGLLFVGSLAVGWFVADMVLRPINRITGVAREIQATDLKRRINLSGPNDELRDLADTFDEMLARLDQAFEGQRRFIHETSHELRNPLAVLRTNLDVVQSDPTATVEDYREVSEVMGRTAERMTALVDDLLLYARQEAPDHREELVDAATVVTETVAEYRASAEAKSIRLLEHATPRSF-VKGDPTALRRALANLLTNAIRHTPEAGRIRVASGSEAAWVWVAVEDEGPGI 350          
BLAST of mRNA_M-pyrifera_M_contig81664.19120.1 vs. uniprot
Match: A0A2E6XVA1_9ACTN (Histidine kinase n=3 Tax=Actinobacteria TaxID=201174 RepID=A0A2E6XVA1_9ACTN)

HSP 1 Score: 283 bits (723), Expect = 5.270e-90
Identity = 164/310 (52.90%), Postives = 206/310 (66.45%), Query Frame = 1
Query:    1 LFGLATIVVGGIYAGVARGLEKQEVSRTEEWVTFFRDARGQPSVATVEVE---VQDYLLLFEQAVNEEALDQLRTYAFGALGLLFVGSLVVGWFVSGLVLRPVGRITGVAKEIEATDLSRRIDLDGPDDELKELADTFDGMLARIDEAFASQREFIHEASHELRNPLADIRTNIDVTLDDPDATTDDLRATSEVVGRSAERMSTLVDDLLLYARHGTRPTRREDVDLVDQVRDLVEEFGAAAEANGLTLVADVAAHELPVRGDGQAIHRAAANLVANAVRLAPSGTTVTVAAADXXXXXXXXXXXXXPGI 921
            LFGLA IVVG IY  ++R L  + VSR   +     DA  +P+ A    +   V   L  FE+ VN  ALD+LRTY+  A+  LF+GSL VGW+V+GLVLRP+GRI+ VA+EI ATDLSRRI+L GPDDEL+++ADTFD ML R+D AF SQR F+ EASHELRNPLA +R N+DV + DPDA TDD RA  EV GR+A RMS LVDDLLLYA H    +RRE +D    V + +E+FGAAA A+G+ L  +VA HEL V GD  A+ R  ANL++NA+R++  G  V V A               PG+
Sbjct:   32 LFGLAAIVVGSIYLSLSRTLSDEPVSRDARYSDMIVDA--EPASADPGGDSRPVGGRLAAFEEEVNRRALDRLRTYSVTAVAALFLGSLAVGWYVAGLVLRPIGRISSVAREISATDLSRRIELGGPDDELRDMADTFDEMLGRLDVAFESQRRFVQEASHELRNPLAVLRANLDVVMADPDADTDDFRAAGEVAGRAAARMSALVDDLLLYAHHERTDSRREPIDASTVVVETIEDFGAAASADGVALQHEVA-HELLVVGDPVALRRVLANLLSNAIRVSDPGGRVRVTAGQDSEMVWMSVLDDGPGL 338          
BLAST of mRNA_M-pyrifera_M_contig81664.19120.1 vs. uniprot
Match: A0A2E8BEF5_9ACTN (Histidine kinase n=1 Tax=Acidimicrobiaceae bacterium TaxID=2024894 RepID=A0A2E8BEF5_9ACTN)

HSP 1 Score: 275 bits (704), Expect = 3.840e-87
Identity = 162/297 (54.55%), Postives = 200/297 (67.34%), Query Frame = 1
Query:    1 LFGLATIVVGGIYAGVARGLEKQEVSRTEEWVTFFRDARGQPSVATVEVEVQDY-----LLLFEQAVNEEALDQLRTYAFGALGLLFVGSLVVGWFVSGLVLRPVGRITGVAKEIEATDLSRRIDLDGPDDELKELADTFDGMLARIDEAFASQREFIHEASHELRNPLADIRTNIDVTLDDPDATTDDLRATSEVVGRSAERMSTLVDDLLLYARHGTRPTRREDVDLVDQVRDLVEEFGAAAEANGLTLVADVAAHELPVRGDGQAIHRAAANLVANAVRLA-PSGTTVTVAAAD 873
            LFGLA IVVGGIY  ++R L  + VSR   +     DA      + VE E  D      L  FE+ VN  ALD+LRTY+  AL  L +GS VVGW+V+GLVLRP+GRI+ VA+EI ATDLSRRIDL GP DEL+++ADTFD ML R+D AF SQR F+ EASHELRNPLA +R N+DV + D  A TDD RA  EV GR+A RMS LVDDLLLYA H    +R E VD  + V + VE+FGAAA   G+ +  ++A HELPV GD  A+ RA ANL++NA+R++ P+G     A  D
Sbjct:   32 LFGLAAIVVGGIYLSLSRALSDEPVSRDVRYGDMIIDA----GASYVESEGDDQSAAGRLTAFEEEVNHRALDRLRTYSVTALAALLLGSFVVGWYVAGLVLRPIGRISLVAREISATDLSRRIDLGGPADELRDMADTFDEMLGRLDVAFESQRRFVQEASHELRNPLAVLRANLDVVMADSKADTDDFRAAGEVAGRAAARMSALVDDLLLYAHHERTDSRLEPVDASNLVEETVEDFGAAASEAGVAIQHEIA-HELPVVGDPVALRRALANLLSNAIRVSDPTGRVRVTAGQD 323          
BLAST of mRNA_M-pyrifera_M_contig81664.19120.1 vs. uniprot
Match: A0A800IBY0_9ACTN (Histidine kinase n=1 Tax=Acidimicrobiia bacterium TaxID=2080302 RepID=A0A800IBY0_9ACTN)

HSP 1 Score: 272 bits (696), Expect = 5.140e-86
Identity = 161/298 (54.03%), Postives = 202/298 (67.79%), Query Frame = 1
Query:    1 LFGLATIVVGGIYAGVARGLEKQEVSRTEEWVTF---FRDARGQPSVATVEV---EVQDYLLLFEQAVNEEALDQLRTYAFGALGLLFVGSLVVGWFVSGLVLRPVGRITGVAKEIEATDLSRRIDLDGPDDELKELADTFDGMLARIDEAFASQREFIHEASHELRNPLADIRTNIDVTLDDPDATTDDLRATSEVVGRSAERMSTLVDDLLLYARHGTRPTRREDVDLVDQVRDLVEEFGAAAEANGLTLVADVAAHELPVRGDGQAIHRAAANLVANAVRLA-PSGTTVTVAAAD 873
            LFGLA++VVGGIY  ++  L+ + +SRT  +        +   + SVA   +   E Q YL+ FEQAVN  AL QLR+Y+  +L  LF+ S+V+GW+VSG+VLRP+GRIT VA+ I+ATDLS+RI+L GP DEL++LADTFD ML R+DEAF  QR FI EASHELRNPLA +RTN+DV +DDP+ATT D R   EV GRSA RMS LVDDLLLYA H     +RE +DL   V + VE+F AAA      L A VA  +L V GDG A+ RA ANL+ NA+R+  P G     A  D
Sbjct:   21 LFGLASLVVGGIYLSLSNALDDEPMSRTAAFQVLGEEMEELNVRNSVADSSLVLEEAQPYLVAFEQAVNRRALTQLRSYSVVSLVALFLASMVIGWYVSGMVLRPIGRITAVARHIQATDLSQRIELGGPTDELRDLADTFDNMLDRLDEAFEGQRRFIQEASHELRNPLAVMRTNLDVVMDDPEATTGDFRIAGEVAGRSAIRMSALVDDLLLYAHHKRPDAQREPLDLSILVAETVEDFAAAATRAQAVLNAKVAP-DLLVVGDGVALRRALANLLNNALRVVDPQGLVAVTAGHD 317          
BLAST of mRNA_M-pyrifera_M_contig81664.19120.1 vs. uniprot
Match: A0A7C7WDC8_9ACTN (Histidine kinase n=5 Tax=root TaxID=1 RepID=A0A7C7WDC8_9ACTN)

HSP 1 Score: 272 bits (696), Expect = 5.960e-86
Identity = 153/288 (53.12%), Postives = 199/288 (69.10%), Query Frame = 1
Query:    1 LFGLATIVVGGIYAGVARGLEKQEVSRTEEWVTFFR-DARGQPSVATVEVEVQDYLLLFEQAVNEEALDQLRTYAFGALGLLFVGSLVVGWFVSGLVLRPVGRITGVAKEIEATDLSRRIDLDGPDDELKELADTFDGMLARIDEAFASQREFIHEASHELRNPLADIRTNIDVTLDDPDATTDDLRATSEVVGRSAERMSTLVDDLLLYARHGTRPTRREDVDLVDQVRDLVEEFGAAAEANGLTLVADVAAHELPVRGDGQAIHRAAANLVANAVRLAPSGTTVTV 861
            LF LA ++VGGIY G++R L  + +SR   +      D     S+   + E + +L++FE  VN  AL++LR Y+F ALG LF+GS+ VGW+V+GLVLRP+GRI+ VA+EI ATDLSRRIDL GP DEL++LADTFD ML R+DE+F  QR F+ EASHELRNPLA +RTN+DV + DPDA  +D RA   V  R+AERMS LVDDLLLYA H  R + RE +DL   V + VE+F AAA   G+ L  D  +  L V GD  A+ RA ANL++NA+R++ +G  V V
Sbjct:   31 LFALAAVMVGGIYLGLSRALSDEPMSRMARFEQMVATDVADGVSMTPGDHEERPWLVIFESEVNRRALERLRAYSFTALGGLFLGSIAVGWYVAGLVLRPIGRISAVAREITATDLSRRIDLGGPSDELRDLADTFDEMLGRLDESFEGQRRFVQEASHELRNPLAVLRTNLDVVMADPDAGPEDFRAAGVVAVRAAERMSVLVDDLLLYAHHERRDSSREPIDLGTVVAETVEDFAAAASREGVGLDHDRCSG-LDVLGDAAALRRALANLLSNAIRVSDAGGRVRV 317          
BLAST of mRNA_M-pyrifera_M_contig81664.19120.1 vs. uniprot
Match: A0A6I3C239_9ACTN (Histidine kinase n=2 Tax=root TaxID=1 RepID=A0A6I3C239_9ACTN)

HSP 1 Score: 272 bits (696), Expect = 1.040e-85
Identity = 168/308 (54.55%), Postives = 203/308 (65.91%), Query Frame = 1
Query:    1 LFGLATIVVGGIYAGVARGLEKQE-VSRTEEWVTFFRDARGQPSVATVEVEVQDYLLLFEQAVNEEALDQLRTYAFGALGLLFVGSLVVGWFVSGLVLRPVGRITGVAKEIEATDLSRRIDLDGPDDELKELADTFDGMLARIDEAFASQREFIHEASHELRNPLADIRTNIDVTLDDPDATTDDLRATSEVVGRSAERMSTLVDDLLLYARHGTRPTRREDVDLVDQVRDLVEEFGAAAEANGLTLVADVAAHELPVRGDGQAIHRAAANLVANAVRLAPSGTTVTVAAADXXXXXXXXXXXXXPGI 921
            LFGLA  VV GIYAGV+R L  Q  ++R+E   T  R   G P +    VE++D+    +   N  AL++LR Y+F ALGLLFV SL VG+ V+G VLRP+GRIT VA++I+ATDLSRRID+ GP+DEL +LADTFD MLAR+D AF SQR FIHEASHELRNPLA IRTN++V L DPDA  DDLR    VV R+AERMSTLVDDLLLYAR     +R   +D+   V +   +F A AE NGL +   VA   L V  D   I +A ANL+ANA+R APSGT V +AA               PGI
Sbjct:   31 LFGLAGFVVLGIYAGVSRTLHDQRPITRSEP--TLIRLNGGPPQLVEF-VEMEDFTAAVQTEANTRALEKLREYSFTALGLLFVASLGVGYLVAGRVLRPIGRITNVARDIQATDLSRRIDMRGPNDELHQLADTFDAMLARLDGAFESQRRFIHEASHELRNPLAVIRTNLEVVLSDPDANADDLREVGIVVRRTAERMSTLVDDLLLYARREAPASRAGLIDVASLVGEAGVDFRATAETNGLHIDC-VAVPGLWVNADATGIRQALANLLANAIRHAPSGTAVRLAAGREGGWVWVAVEDHGPGI 334          
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig81664.19120.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A7X5WLX8_9ACTN1.990e-13771.66Histidine kinase (Fragment) n=1 Tax=Actinomycetia ... [more]
A0A2D6U617_9ACTN3.500e-12768.86Histidine kinase n=6 Tax=Acidimicrobiaceae bacteri... [more]
A0A3M2GWC6_ACTSX1.370e-11965.47Histidine kinase n=1 Tax=Actinomyces sp. TaxID=293... [more]
A0A358A559_9ACTN1.820e-10274.88Sensor histidine kinase (Fragment) n=1 Tax=Acidimi... [more]
A0A7Y2DFE3_9ACTN4.620e-9252.77Histidine kinase n=1 Tax=Acidimicrobiales bacteriu... [more]
A0A2E6XVA1_9ACTN5.270e-9052.90Histidine kinase n=3 Tax=Actinobacteria TaxID=2011... [more]
A0A2E8BEF5_9ACTN3.840e-8754.55Histidine kinase n=1 Tax=Acidimicrobiaceae bacteri... [more]
A0A800IBY0_9ACTN5.140e-8654.03Histidine kinase n=1 Tax=Acidimicrobiia bacterium ... [more]
A0A7C7WDC8_9ACTN5.960e-8653.13Histidine kinase n=5 Tax=root TaxID=1 RepID=A0A7C7... [more]
A0A6I3C239_9ACTN1.040e-8554.55Histidine kinase n=2 Tax=root TaxID=1 RepID=A0A6I3... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig81664contigM-pyrifera_M_contig81664:3..923 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-19
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Properties
Property NameValue
Taxonomic scopeBacteria
Seed ortholog score219.5
Seed ortholog evalue2.1e-54
Seed eggNOG ortholog1394178.AWOO02000067_gene218
Hectar predicted targeting categorysignal peptide
EggNOG free text desc.PhoQ Sensor
EggNOG OGs2GIV9@201174,COG0642@1,COG2205@2
COG Functional cat.T
Best tax levelActinobacteria
Best eggNOG OGNA|NA|NA
Exons1
Model size921
Cds size921
Stop0
Start0
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622816724.2144723-CDS-M-pyrifera_M_contig81664:2..9231622816724.2144723-CDS-M-pyrifera_M_contig81664:2..923Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig81664 3..923 +
1692278141.619681-CDS-M-pyrifera_M_contig81664:2..9231692278141.619681-CDS-M-pyrifera_M_contig81664:2..923Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig81664 3..923 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig81664.19120.1prot_M-pyrifera_M_contig81664.19120.1Macrocystis pyrifera P11B4 malepolypeptideM-pyrifera_M_contig81664 3..923 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_M-pyrifera_M_contig81664.19120.1

>prot_M-pyrifera_M_contig81664.19120.1 ID=prot_M-pyrifera_M_contig81664.19120.1|Name=mRNA_M-pyrifera_M_contig81664.19120.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=307bp
LFGLATIVVGGIYAGVARGLEKQEVSRTEEWVTFFRDARGQPSVATVEVE
VQDYLLLFEQAVNEEALDQLRTYAFGALGLLFVGSLVVGWFVSGLVLRPV
GRITGVAKEIEATDLSRRIDLDGPDDELKELADTFDGMLARIDEAFASQR
EFIHEASHELRNPLADIRTNIDVTLDDPDATTDDLRATSEVVGRSAERMS
TLVDDLLLYARHGTRPTRREDVDLVDQVRDLVEEFGAAAEANGLTLVADV
AAHELPVRGDGQAIHRAAANLVANAVRLAPSGTTVTVAAADEGRWVTLAV
ADEGPGI
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mRNA from alignment at M-pyrifera_M_contig81664:3..923+

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_M-pyrifera_M_contig81664.19120.1 ID=mRNA_M-pyrifera_M_contig81664.19120.1|Name=mRNA_M-pyrifera_M_contig81664.19120.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=921bp|location=Sequence derived from alignment at M-pyrifera_M_contig81664:3..923+ (Macrocystis pyrifera P11B4 male)
CTGTTCGGGCTGGCGACGATCGTCGTGGGTGGGATCTACGCCGGCGTAGC CCGCGGGCTCGAGAAGCAGGAGGTCTCGCGGACCGAGGAGTGGGTCACGT TCTTCCGAGACGCGCGCGGCCAGCCGAGCGTGGCCACCGTCGAGGTAGAG GTGCAGGACTATCTGCTCCTGTTCGAACAGGCCGTCAACGAAGAAGCGCT CGATCAGCTGCGCACCTATGCGTTCGGGGCCCTCGGCCTGTTGTTCGTCG GCAGCCTCGTCGTGGGCTGGTTCGTCTCCGGACTCGTCTTGCGGCCGGTC GGGCGGATCACCGGGGTGGCCAAGGAGATCGAAGCGACAGATTTGTCGCG GCGCATCGACCTCGACGGGCCCGACGATGAGCTCAAGGAGTTGGCCGACA CCTTCGACGGGATGCTCGCTCGGATCGACGAGGCGTTCGCCTCGCAACGC GAGTTCATCCACGAAGCCAGCCACGAACTGCGAAATCCGCTCGCGGACAT TCGCACCAACATCGACGTCACCCTCGACGACCCGGATGCCACCACCGACG ATCTCCGCGCGACGAGCGAAGTCGTCGGCCGGTCGGCGGAGCGAATGTCG ACCCTGGTCGACGACCTCCTCCTCTACGCCCGCCACGGCACCCGTCCGAC GCGCCGTGAAGACGTCGATCTGGTCGACCAGGTCCGCGACCTCGTCGAGG AGTTCGGCGCAGCCGCGGAAGCGAACGGGCTGACGCTGGTGGCCGACGTC GCGGCTCATGAGCTGCCGGTGCGAGGCGACGGGCAGGCGATCCACCGGGC CGCGGCCAATCTCGTGGCGAACGCAGTCCGGCTGGCTCCGAGTGGGACGA CGGTGACGGTCGCCGCTGCCGACGAAGGCCGATGGGTCACGCTGGCCGTG GCCGATGAGGGGCCGGGTATC
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Coding sequence (CDS) from alignment at M-pyrifera_M_contig81664:3..923+

>mRNA_M-pyrifera_M_contig81664.19120.1 ID=mRNA_M-pyrifera_M_contig81664.19120.1|Name=mRNA_M-pyrifera_M_contig81664.19120.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=1842bp|location=Sequence derived from alignment at M-pyrifera_M_contig81664:3..923+ (Macrocystis pyrifera P11B4 male)
CTGTTCGGGCTGGCGACGATCGTCGTGGGTGGGATCTACGCCGGCGTAGC
CCGCGGGCTCGAGAAGCAGGAGGTCTCGCGGACCGAGGAGTGGGTCACGT
TCTTCCGAGACGCGCGCGGCCAGCCGAGCGTGGCCACCGTCGAGGTAGAG
GTGCAGGACTATCTGCTCCTGTTCGAACAGGCCGTCAACGAAGAAGCGCT
CGATCAGCTGCGCACCTATGCGTTCGGGGCCCTCGGCCTGTTGTTCGTCG
GCAGCCTCGTCGTGGGCTGGTTCGTCTCCGGACTCGTCTTGCGGCCGGTC
GGGCGGATCACCGGGGTGGCCAAGGAGATCGAAGCGACAGATTTGTCGCG
GCGCATCGACCTCGACGGGCCCGACGATGAGCTCAAGGAGTTGGCCGACA
CCTTCGACGGGATGCTCGCTCGGATCGACGAGGCGTTCGCCTCGCAACGC
GAGTTCATCCACGAAGCCAGCCACGAACTGCGAAATCCGCTCGCGGACAT
TCGCACCAACATCGACGTCACCCTCGACGACCCGGATGCCACCACCGACG
ATCTCCGCGCGACGAGCGAAGTCGTCGGCCGGTCGGCGGAGCGAATGTCG
ACCCTGGTCGACGACCTCCTCCTCTACGCCCGCCACGGCACCCGTCCGAC
GCGCCGTGAAGACGTCGATCTGGTCGACCAGGTCCGCGACCTCGTCGAGG
AGTTCGGCGCAGCCGCGGAAGCGAACGGGCTGACGCTGGTGGCCGACGTC
GCGGCTCATGAGCTGCCGGTGCGAGGCGACGGGCAGGCGATCCACCGGGC
CGCGGCCAATCTCGTGGCGAACGCAGTCCGGCTGGCTCCGAGTGGGACGA
CGGTGACGGTCGCCGCTGCCGACGAAGGCCGATGGGTCACGCTGGCCGTG
GCCGATGAGGGGCCGGGTATCCTGTTCGGGCTGGCGACGATCGTCGTGGG
TGGGATCTACGCCGGCGTAGCCCGCGGGCTCGAGAAGCAGGAGGTCTCGC
GGACCGAGGAGTGGGTCACGTTCTTCCGAGACGCGCGCGGCCAGCCGAGC
GTGGCCACCGTCGAGGTAGAGGTGCAGGACTATCTGCTCCTGTTCGAACA
GGCCGTCAACGAAGAAGCGCTCGATCAGCTGCGCACCTATGCGTTCGGGG
CCCTCGGCCTGTTGTTCGTCGGCAGCCTCGTCGTGGGCTGGTTCGTCTCC
GGACTCGTCTTGCGGCCGGTCGGGCGGATCACCGGGGTGGCCAAGGAGAT
CGAAGCGACAGATTTGTCGCGGCGCATCGACCTCGACGGGCCCGACGATG
AGCTCAAGGAGTTGGCCGACACCTTCGACGGGATGCTCGCTCGGATCGAC
GAGGCGTTCGCCTCGCAACGCGAGTTCATCCACGAAGCCAGCCACGAACT
GCGAAATCCGCTCGCGGACATTCGCACCAACATCGACGTCACCCTCGACG
ACCCGGATGCCACCACCGACGATCTCCGCGCGACGAGCGAAGTCGTCGGC
CGGTCGGCGGAGCGAATGTCGACCCTGGTCGACGACCTCCTCCTCTACGC
CCGCCACGGCACCCGTCCGACGCGCCGTGAAGACGTCGATCTGGTCGACC
AGGTCCGCGACCTCGTCGAGGAGTTCGGCGCAGCCGCGGAAGCGAACGGG
CTGACGCTGGTGGCCGACGTCGCGGCTCATGAGCTGCCGGTGCGAGGCGA
CGGGCAGGCGATCCACCGGGCCGCGGCCAATCTCGTGGCGAACGCAGTCC
GGCTGGCTCCGAGTGGGACGACGGTGACGGTCGCCGCTGCCGACGAAGGC
CGATGGGTCACGCTGGCCGTGGCCGATGAGGGGCCGGGTATC
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