mRNA_M-pyrifera_M_contig81640.19106.1 (mRNA) Macrocystis pyrifera P11B4 male
Overview
Homology
BLAST of mRNA_M-pyrifera_M_contig81640.19106.1 vs. uniprot
Match: A0A2J7RIU8_9NEOP (Reverse transcriptase Ty1/copia-type domain-containing protein (Fragment) n=1 Tax=Cryptotermes secundus TaxID=105785 RepID=A0A2J7RIU8_9NEOP) HSP 1 Score: 84.3 bits (207), Expect = 3.210e-17 Identity = 40/101 (39.60%), Postives = 62/101 (61.39%), Query Frame = 1 Query: 4 DPKNYGEAIHSTAAVKWNDAMKKQLATLEDMGAWSTAPFPTDRSAIVSCTWVYKTKRDKYGNVTQYKARLVARGDRQSASLYGKTYAPVTTLTSLRLFLSI 306 +PKNY +A+ S A +W A++++L L+D W+ P + I S WV+K K+++Y +TQ+KARLVARG +Q Y YAPV L + R+ L++ Sbjct: 30 EPKNYEDAMKSQHATEWEKAIERELLALKDSDTWTVVDKPVKCNEIDS-KWVFKVKKNEYNEITQFKARLVARGFQQKGLQYDDIYAPVAKLQTFRILLAV 129
BLAST of mRNA_M-pyrifera_M_contig81640.19106.1 vs. uniprot
Match: F0X0S8_9STRA (Putative polyprotein n=1 Tax=Albugo laibachii Nc14 TaxID=890382 RepID=F0X0S8_9STRA) HSP 1 Score: 84.3 bits (207), Expect = 3.990e-17 Identity = 39/101 (38.61%), Postives = 63/101 (62.38%), Query Frame = 1 Query: 7 PKNYGEAIHSTAAVKWNDAMKKQLATLEDMGAWSTAPFPTDRSAIVSCTWVYKTKRDKYGNVTQYKARLVARGDRQSASL-YGKTYAPVTTLTSLRLFLSI 306 P Y EA+ S V+W +A+ + + ++ W A P+ + ++ C W++ KRD+YG V +YKARL+ +G RQ+A + Y TYAPV + +S+R+FL I Sbjct: 118 PATYEEAVKSGDGVQWKEAIASEFQSPDEKKTWIIADRPSGQK-VIGCKWIFAIKRDEYGKVQRYKARLITQGFRQNAGVDYSNTYAPVFSTSSIRIFLGI 217
BLAST of mRNA_M-pyrifera_M_contig81640.19106.1 vs. uniprot
Match: A0A1Y1K3Y8_PHOPY (Uncharacterized protein (Fragment) n=4 Tax=Photinus pyralis TaxID=7054 RepID=A0A1Y1K3Y8_PHOPY) HSP 1 Score: 84.0 bits (206), Expect = 1.010e-16 Identity = 42/103 (40.78%), Postives = 66/103 (64.08%), Query Frame = 1 Query: 4 DPKNYGEAIHSTAAVKWNDAMKKQLATLEDMGAWSTAPFPTDRSAIVSCTWVYKTKRDKYGNVTQYKARLVARGDRQSASLYGKT--YAPVTTLTSLRLFLSI 306 +P Y +AI S A W AM+++++ L + W +S ++ C WVYK KRD+ GNVT+YKARLVARG +Q+ +++ + Y+PV L S+R+FL++ Sbjct: 853 EPTTYDDAIASDEAKMWIQAMEREISALNENETWVLINESDIKSEVIQCKWVYKKKRDEVGNVTRYKARLVARGFQQT-NVHNSSDLYSPVAKLPSVRIFLAL 954
BLAST of mRNA_M-pyrifera_M_contig81640.19106.1 vs. uniprot
Match: A0A5C3EBA0_9BASI (Related to Retrotransposon protein n=1 Tax=Ustilago trichophora TaxID=86804 RepID=A0A5C3EBA0_9BASI) HSP 1 Score: 83.6 bits (205), Expect = 1.390e-16 Identity = 45/98 (45.92%), Postives = 62/98 (63.27%), Query Frame = 1 Query: 4 DPKNYGEAIHSTAAVKWNDAMKKQLATLEDMGAWSTAPFPTDRSAIVSCTWVYKTKRDKYGNVTQYKARLVARGDRQSASL-YGKTYAPVTTLTSLRL 294 DP+ +A S KW +A+K +L +L++ G W+ P R AI + WV+KTK+D GNV++YKARLVARG Q + Y TY PV ++TSLRL Sbjct: 862 DPQMLAQARASPNWPKWEEAIKVELDSLDNTGTWTIVDLPAARKAITA-KWVFKTKQDADGNVSKYKARLVARGFTQMHGIDYHDTYLPVVSMTSLRL 958
BLAST of mRNA_M-pyrifera_M_contig81640.19106.1 vs. uniprot
Match: A0A0P1BFS2_9BASI (Gag-pol polyprotein n=1 Tax=Ceraceosorus bombacis TaxID=401625 RepID=A0A0P1BFS2_9BASI) HSP 1 Score: 82.4 bits (202), Expect = 3.440e-16 Identity = 42/101 (41.58%), Postives = 60/101 (59.41%), Query Frame = 1 Query: 4 DPKNYGEAIHSTAAVKWNDAMKKQLATLEDMGAWSTAPFPTDRSAIVSCTWVYKTKRDKYGNVTQYKARLVARGDRQSASLYGKTYAPVTTLTSLRLFLSI 306 DP NY +A+ S ++ W AM +L W+ P P D + ++ WV+KTKR+ G V +KAR+VARGD+QSA +TYAPV ++ S RL S+ Sbjct: 223 DPNNYRQAMSSPSSTLWKAAMDAELQAQTKAATWTPVPCP-DGAQVIHSQWVFKTKRNAQGEVEHHKARVVARGDQQSADS-AETYAPVASMKSFRLLSSL 321
BLAST of mRNA_M-pyrifera_M_contig81640.19106.1 vs. uniprot
Match: A0A0J7NAF3_LASNI (Retrovirus-related gag-pol polyprotein n=1 Tax=Lasius niger TaxID=67767 RepID=A0A0J7NAF3_LASNI) HSP 1 Score: 80.5 bits (197), Expect = 1.670e-15 Identity = 42/102 (41.18%), Postives = 60/102 (58.82%), Query Frame = 1 Query: 4 DPKNYGEAIHSTAAVKWNDAMKKQLATLEDMGAWSTAPFPTDRSAIVSCTWVYKTKRDKYGNVTQYKARLVARGDRQSASL-YGKTYAPVTTLTSLRLFLSI 306 +PK+ EA+ +W + MK ++A+L+ W P R AI SC W+YK K D+ GN+T+YKARLVA+G Q Y + +APV T+ R+ LSI Sbjct: 687 EPKSLSEALADKNKEEWINVMKDEMASLKRNQTWELCELPKGREAI-SCKWIYKLKTDEKGNITRYKARLVAQGFCQKYGTDYDEVFAPVAKQTTFRILLSI 787
BLAST of mRNA_M-pyrifera_M_contig81640.19106.1 vs. uniprot
Match: A5BP57_VITVI (Reverse transcriptase Ty1/copia-type domain-containing protein (Fragment) n=1 Tax=Vitis vinifera TaxID=29760 RepID=A5BP57_VITVI) HSP 1 Score: 79.3 bits (194), Expect = 1.790e-15 Identity = 35/92 (38.04%), Postives = 61/92 (66.30%), Query Frame = 1 Query: 34 STAAVKWNDAMKKQLATLEDMGAWSTAPFPTDRSAIVSCTWVYKTKRDKYGNVTQYKARLVARGDRQSASL-YGKTYAPVTTLTSLRLFLSI 306 S+ + KW +AMK ++ +++D G W P ++SC W++KT+RD GN+ +YKARLVA+G Q + Y +T++PV++ SLR+ +++ Sbjct: 194 SSDSEKWIEAMKDEMKSMKDNGVWDLVELPKSVK-LISCKWIFKTRRDSKGNIVRYKARLVAKGFTQKEGIDYKETFSPVSSKDSLRIIMAL 284
BLAST of mRNA_M-pyrifera_M_contig81640.19106.1 vs. uniprot
Match: A0A8J4BBK8_9CHLO (Uncharacterized protein n=3 Tax=Volvox africanus TaxID=51714 RepID=A0A8J4BBK8_9CHLO) HSP 1 Score: 79.7 bits (195), Expect = 3.130e-15 Identity = 40/102 (39.22%), Postives = 61/102 (59.80%), Query Frame = 1 Query: 4 DPKNYGEAIHSTAAVKWNDAMKKQLATLEDMGAWSTAPFPTDRSAIVSCTWVYKTKRDKYGNVTQYKARLVARGDRQSASL-YGKTYAPVTTLTSLRLFLSI 306 +PK+Y EA++S+ A +W AM K++ W A P + I+ C WVYK KR + G + ++KARLVA+G Q A + YG+ +AP + SLR L++ Sbjct: 842 EPKSYDEAVNSSNADEWKQAMDKEITAQLANRTWELAK-PPPNARILPCRWVYKVKRAEDGGIERFKARLVAKGYEQRAGIDYGELFAPTSRFASLRTLLAV 942
BLAST of mRNA_M-pyrifera_M_contig81640.19106.1 vs. uniprot
Match: A0A8H4R3V9_9AGAR (Uncharacterized protein n=1 Tax=Agrocybe pediades TaxID=84607 RepID=A0A8H4R3V9_9AGAR) HSP 1 Score: 79.3 bits (194), Expect = 4.280e-15 Identity = 40/102 (39.22%), Postives = 59/102 (57.84%), Query Frame = 1 Query: 7 PKNYGEAIHSTAAVKWNDAMKKQLATLEDMGAWSTAPFPTDRSAIVSCTWVYKTKRDKYGNVTQYKARLVARGDRQSASL-YGK--TYAPVTTLTSLRLFLS 303 P+ + EA+ A +W +AM +++ TLE MG W P R +V C WV+ KRD+YG V ++KARLV +G Q + Y + T+APV +LR L+ Sbjct: 894 PRTFEEALAGPEATQWKEAMDEEMGTLEKMGTWRKGMLPVGRK-VVGCRWVFTKKRDEYGRVVKFKARLVVQGFSQKPGVDYSEDGTFAPVMRFETLRTMLA 994
BLAST of mRNA_M-pyrifera_M_contig81640.19106.1 vs. uniprot
Match: A0A0J7K7B7_LASNI (Retrovirus-related pol polyprotein from transposon tnt 1-94 n=1 Tax=Lasius niger TaxID=67767 RepID=A0A0J7K7B7_LASNI) HSP 1 Score: 78.6 bits (192), Expect = 7.960e-15 Identity = 41/103 (39.81%), Postives = 62/103 (60.19%), Query Frame = 1 Query: 1 RDPKNYGEAIHSTAAVKWNDAMKKQLATLEDMGAWSTAPFPTDRSAIVSCTWVYKTKRDKYGNVTQYKARLVARGDRQSASL-YGKTYAPVTTLTSLRLFLSI 306 R+PK++ EA+ S A +W AM +L L W P ++ I+ C WV+K K ++ GNVT+YKARLVA+G Q + Y + +APV T++R+ L+I Sbjct: 804 REPKSFREALTSLDAERWRQAMTDELNGLMQNNTWELVDPPRYKT-ILGCKWVFKLKHNEMGNVTKYKARLVAQGFSQKFGIDYDEVFAPVVRQTTIRMLLTI 905 The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig81640.19106.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_M-pyrifera_M_contig81640.19106.1 >prot_M-pyrifera_M_contig81640.19106.1 ID=prot_M-pyrifera_M_contig81640.19106.1|Name=mRNA_M-pyrifera_M_contig81640.19106.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=102bp RDPKNYGEAIHSTAAVKWNDAMKKQLATLEDMGAWSTAPFPTDRSAIVSCback to top mRNA from alignment at M-pyrifera_M_contig81640:621..926+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_M-pyrifera_M_contig81640.19106.1 ID=mRNA_M-pyrifera_M_contig81640.19106.1|Name=mRNA_M-pyrifera_M_contig81640.19106.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=306bp|location=Sequence derived from alignment at M-pyrifera_M_contig81640:621..926+ (Macrocystis pyrifera P11B4 male)back to top Coding sequence (CDS) from alignment at M-pyrifera_M_contig81640:621..926+ >mRNA_M-pyrifera_M_contig81640.19106.1 ID=mRNA_M-pyrifera_M_contig81640.19106.1|Name=mRNA_M-pyrifera_M_contig81640.19106.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=612bp|location=Sequence derived from alignment at M-pyrifera_M_contig81640:621..926+ (Macrocystis pyrifera P11B4 male)back to top |