mRNA_M-pyrifera_M_contig8162.19105.1 (mRNA) Macrocystis pyrifera P11B4 male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_M-pyrifera_M_contig8162.19105.1
Unique NamemRNA_M-pyrifera_M_contig8162.19105.1
TypemRNA
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Homology
[Close]
BLAST of mRNA_M-pyrifera_M_contig8162.19105.1 vs. uniprot
Match: A0A0R5QMD0_SACJA (Mannose-6-phosphate isomerase n=1 Tax=Saccharina japonica TaxID=88149 RepID=A0A0R5QMD0_SACJA)

HSP 1 Score: 838 bits (2164), Expect = 1.080e-305
Identity = 415/430 (96.51%), Postives = 424/430 (98.60%), Query Frame = 1 
Query:    1 MARRMSSFVQKYAWGKPGDQSVVASLKAAGDKSYKVDADEPYAEMWIGTHPSGPSNLLTNSGNVGPLLKDHLTSEPDALGDIAHKGDLPFLFKVISINKALSIQAHPNKKLAERLHAKRPDVYADDNHKPEMAVTLSDFEALCGFRPFMEIIWNLHFFPELLALVSLEAIHQMMTAGDDVERQKFALRELFRSYNNAPDEKVRTQVDLLVARLDWASGIPRVDEVEFNEGEVKMSHGEGRDEEEQKAQFTETMFDSRFRQGSLAAEALDKRMKKENPDVIRVMLRLSTEYPGDLGILMPLVLNLLMLKTGKAFFMTVDEPHAYLRGDILECMACSNNVVRCALTPKFRDVDLLVDMLSYNMAAPAVLHPNIVDENRKRFTPPVADFEIEDIHVPANDVYGLEPMPVPAVLVTLKGTQGGLLLDEDTGKEV 1290
            MARRMSSFVQKYAWGKPGDQSVVASLKAAGDKSYKVDADEPYAEMWIGTHPSGPSNLLTNSGNVGPLLKDHLTSEP ALGDIAHKGDLPFLFKVISINKALSIQAHPNKKLAERLHA+RPDVYADDNHKPEMAVTLSDFEALCGFRPFMEIIWNLHFFPELLALVSLEA+HQMMTAGDDVERQKFALRELFRSYNNAP+EKVRTQVDLLVARLDWAS IPR+DEVE  EGEVKM HGEGRDEEEQKAQFTETMFDSRFRQGSLAAEALDKRMKKENPDV+RVMLRLSTEYPGDLGILMPLVLNLLMLKTGKAFFMTVDEPHAYLRGDILECMACSNNVVRCALTPK+RDVDLLVDMLSYNMAAPAVLHP+ VD+NRKRFTPPVADFEIEDIHVPANDVYGLEPMPVPAVLVTLKGTQGGLLLDEDTGKE+
Sbjct:    1 MARRMSSFVQKYAWGKPGDQSVVASLKAAGDKSYKVDADEPYAEMWIGTHPSGPSNLLTNSGNVGPLLKDHLTSEPGALGDIAHKGDLPFLFKVISINKALSIQAHPNKKLAERLHAERPDVYADDNHKPEMAVTLSDFEALCGFRPFMEIIWNLHFFPELLALVSLEAVHQMMTAGDDVERQKFALRELFRSYNNAPEEKVRTQVDLLVARLDWASDIPRIDEVELVEGEVKMGHGEGRDEEEQKAQFTETMFDSRFRQGSLAAEALDKRMKKENPDVVRVMLRLSTEYPGDLGILMPLVLNLLMLKTGKAFFMTVDEPHAYLRGDILECMACSNNVVRCALTPKYRDVDLLVDMLSYNMAAPAVLHPHTVDDNRKRFTPPVADFEIEDIHVPANDVYGLEPMPVPAVLVTLKGTQGGLLLDEDTGKEI 430
[Close]
BLAST of mRNA_M-pyrifera_M_contig8162.19105.1 vs. uniprot
Match: D8LB30_ECTSI (Mannose-6-phosphate isomerase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LB30_ECTSI)

HSP 1 Score: 717 bits (1852), Expect = 3.970e-258
Identity = 360/433 (83.14%), Postives = 389/433 (89.84%), Query Frame = 1 
Query:    1 MARRMSSFVQKYAWGKPGDQSVVASLKAAGDKSYKVDADEPYAEMWIGTHPSGPSNLLTNSGNVGPLLKDHLTSEPDALGDIAHKGDLPFLFKVISINKALSIQAHPNKKLAERLHAKRPDVYADDNHKPEMAVTLSDFEALCGFRPFMEIIWNLHFFPELLALVSLEAIHQMMTAGDDVERQKFALRELFRSYNNAPDEKVRTQVDLLVARLDWASGIPRVDEVEFNEGEVKMS-HG--EGRDEEEQKAQFTETMFDSRFRQGSLAAEALDKRMKKENPDVIRVMLRLSTEYPGDLGILMPLVLNLLMLKTGKAFFMTVDEPHAYLRGDILECMACSNNVVRCALTPKFRDVDLLVDMLSYNMAAPAVLHPNIVDENRKRFTPPVADFEIEDIHVPANDVYGLEPMPVPAVLVTLKGTQGGLLLDEDTGKEV 1290
            MARRMSSF+QKYAWGKPGDQSVVASLKAAGD SY+VD D+PYAEMWIGTHPSGPSNLLTNSG VGPLLKDHL SEP+ALGDIAHKGDLPFLFKVISINKALSIQAHPNKKLAERLHA+RP+VYADDNHKPEMAVTLSDFEALCGFRPF EIIWNL+F+PEL ALVSL+A+HQMMTAGDD+ERQKFALRELFRSYNNA  E V+TQ+D LV RL WASGIP V E +    E +++ H   EG +EE QK QFTE MF++RFRQG   +EALDKRMK   PDV+RVMLRLSTEYPGDLGILMPLVLNLLMLKTG+AFFMTVDEPHAYLRGDILECMACSNNVVRCALTPKFRDVDLLVDML+YNMAAPAVL P+I+D+NRKRFTPPV  FEIE I+VP ND Y L PMPVPAVLVTL G QGGLLLDEDTGKE+
Sbjct:    1 MARRMSSFIQKYAWGKPGDQSVVASLKAAGDSSYQVDVDQPYAEMWIGTHPSGPSNLLTNSGRVGPLLKDHLASEPEALGDIAHKGDLPFLFKVISINKALSIQAHPNKKLAERLHAERPEVYADDNHKPEMAVTLSDFEALCGFRPFQEIIWNLNFYPELRALVSLDAVHQMMTAGDDIERQKFALRELFRSYNNADKETVKTQIDRLVKRLGWASGIPVVGEQDPGTVETEINGHDAEEGDEEEVQKTQFTEQMFEARFRQGCPTSEALDKRMKDGTPDVVRVMLRLSTEYPGDLGILMPLVLNLLMLKTGQAFFMTVDEPHAYLRGDILECMACSNNVVRCALTPKFRDVDLLVDMLTYNMAAPAVLRPHIIDDNRKRFTPPVDVFEIEMINVPGNDAYRLNPMPVPAVLVTLHGAQGGLLLDEDTGKEI 433
[Close]
BLAST of mRNA_M-pyrifera_M_contig8162.19105.1 vs. uniprot
Match: D7FPP3_ECTSI (Mannose-6-phosphate isomerase n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FPP3_ECTSI)

HSP 1 Score: 459 bits (1181), Expect = 1.880e-155
Identity = 267/515 (51.84%), Postives = 320/515 (62.14%), Query Frame = 1 
Query:   13 MSSFVQKYAWGKPGDQSVVASLKAAGDKSYKVDADEPYAEMWIGTHPSGPSNLLTNSGNVGPLLKDHLTSEPDALGDIAHKGDLPFLFKVISINKALSIQAHPNKKLAERLHAKRPDVYADDNHKPEMAVTLSDFEALCGFRPFMEIIWNLHFFPELLALVSLEAIHQMMTAGDDVERQKFALRELFRSYNNAPDEKVRTQVDLLVARLDW---ASGIP----------RVDEVE----------------------------------------FNEGE------------------VKMSHGEGRD-----------EEEQKAQF-------TETMFDSRFRQGSLAAEALDKRMKKENPDVIRVMLRLSTEYPGDLGILMPLVLNLLMLKTGKAFFMTVDEPHAYLRGDILECMACSNNVVRCALTPKFRDVDLLVDMLSYNMAAPAVLHPNIVDENRKRFTPPVADFEIEDIHVPANDVYGLEPMPVPAVLVTLKGTQGGLLLDEDTGKEV 1290
            + S VQ+YAWGK G  SVVA LK  GD  Y V  +E YAEMWIGTHPSGPS ++ + G+ GPLLK+ L   P  LG I  KGDLPFLFKVISI+KALSIQAHP+K+LAERLHA+RPDVY DDNHKPEMAVTLSDFE LCGFRPF EI+WNLH +PEL ++VS  A+  +  AGDDVERQ+ AL++LF S+       VRTQV  LV+RL+    A   P          ++D+                                          F  GE                  V     +G D           EE ++A+        +E +F   FR G  AA  L  R+++E+ D  RVMLRLS EYPGDLGILMPL+LNLL LK G AFFMTVDEPHAYLRGDILE MACSNNVVR ALTPKFRDV+LLV+ML+YNM APAVL    VD  RKR+TPP+ DFEI+ + VPAN+ Y LE MPVP V+V L+G  GG +++  T +E+
Sbjct:    4 LQSSVQQYAWGKKGSDSVVAKLKGLGDAEYTVKPEENYAEMWIGTHPSGPSRVVRD-GSPGPLLKEILDDNPHVLGAIRWKGDLPFLFKVISISKALSIQAHPDKRLAERLHAERPDVYKDDNHKPEMAVTLSDFEGLCGFRPFYEIVWNLHAYPELRSMVSYGALKAVCKAGDDVERQRSALKKLFGSFVKCDKNVVRTQVAALVSRLEKNFPAEATPDDVSASMNGLKIDQAPEPLREVLAAKSAAGQDNGGAVPDEQKTLNKNPSMHLGGYVFKGGEQGGAPSPPPTLGTVPSFSVGSPSRDGADCDASVSSPPGAEERKRAEDVLADVDKSEEIFGKAFRGGPKAAAGLMARLQREDADSQRVMLRLSKEYPGDLGILMPLMLNLLHLKPGLAFFMTVDEPHAYLRGDILEVMACSNNVVRAALTPKFRDVNLLVEMLTYNMGAPAVLPAETVDACRKRYTPPINDFEIQILQVPANERYELEAMPVPVVMVALEGGDGGRVIESKTDREI 517
[Close]
BLAST of mRNA_M-pyrifera_M_contig8162.19105.1 vs. uniprot
Match: A0A0R5QMD6_SACJA (Mannose-6-phosphate isomerase n=2 Tax=Saccharina japonica TaxID=88149 RepID=A0A0R5QMD6_SACJA)

HSP 1 Score: 433 bits (1113), Expect = 6.400e-144
Identity = 264/563 (46.89%), Postives = 316/563 (56.13%), Query Frame = 1 
Query:   13 MSSFVQKYAWGKPGDQSVVASLKAAGDKSYKVDADEPYAEMWIGTHPSGPSNLLTNSGNVGPLLKDHLTSEPDALGDIAHKGDLPFLFKVISINKALSIQAHPNKKLAERLHAKRPDVYADDNHKPEMAVTLSDFEALCGFRPFMEIIWNLHFFPELLALVSLEAIHQMMTAGDDVERQKFALRELFRSYNNAPDEKVRTQVDLLVARLDW--------------------------------------------------------------------ASG--IPRVDE------------VEFNEG------------------EVKMSH-----------------------GEGRDEEEQKAQ--------------FTETMFDSRFRQGSLAAEALDKRMKKENPDVIRVMLRLSTEYPGDLGILMPLVLNLLMLKTGKAFFMTVDEPHAYLRGDILECMACSNNVVRCALTPKFRDVDLLVDMLSYNMAAPAVLHPNIVDENRKRFTPPVADFEIEDIHVPANDVYGLEPMPVPAVLVTLKGTQGGLLLDEDTGKEV 1290
            + S VQ+YAWGK G  SVVA LK  GD  Y V  +E YAEMWIGTHPSGPS ++ + G  GPLLK+ L   P  LG I  KGDLPFLFKVISI+KALSIQAHP+K+LAERLHA+RPDVY DDNHKPEMAVTLSDFE LCGFRPF EI+WNLH +PEL  +VS  A+  + +AGDDV RQ+ AL++LF S+       VRTQV  LV+RL+                                                                     A G  IP V E               + G                    K+SH                       G+G +    +A+               +E +F   FR G  AA  L  R+++E+ D  RVMLR S EYPGDLGILMPL+LNLL LK G AFFMTVDEPHAYLRGDILE MACSNNVVR ALTPKFRDV+LLV+ML+YNM APAVL    VD  RKR+TPP+ DFEI+ + VPAN+ Y LE M VP V+V L G   G +++ ++G+E+
Sbjct:    4 LQSTVQQYAWGKKGRDSVVAKLKGLGDSEYTVMPEENYAEMWIGTHPSGPSRVMRD-GCPGPLLKEVLDDNPHVLGAIRWKGDLPFLFKVISISKALSIQAHPDKRLAERLHAERPDVYKDDNHKPEMAVTLSDFEGLCGFRPFYEIVWNLHAYPELRGMVSYSALKAVCSAGDDVARQRMALKKLFGSFVKCDKNVVRTQVAALVSRLEKNAPVVNPGRPVSPPPSKNPERAPEPIREALIAHKAAVESXXXXXXXXXXXXXXXXXXXXXXXXXXXXSADGCVIPAVPEGCVIGGGSLTRNASMHLGGSMRGGAGGRQAMVGTLPSAKLSHDSLDRMLDVDVGXXXXXXAVSVSGDGSESSPIRAEPGDKCARDTLADETASEEIFGKAFRGGPEAATRLAARLQREDADSQRVMLRPSKEYPGDLGILMPLMLNLLQLKPGLAFFMTVDEPHAYLRGDILEVMACSNNVVRAALTPKFRDVNLLVEMLTYNMGAPAVLPAETVDACRKRYTPPINDFEIQILQVPANERYELEAMEVPVVMVALAGGADGRVIESESGREI 565
[Close]
BLAST of mRNA_M-pyrifera_M_contig8162.19105.1 vs. uniprot
Match: A0A6H5KTB4_9PHAE (Mannose-6-phosphate isomerase n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KTB4_9PHAE)

HSP 1 Score: 377 bits (968), Expect = 3.710e-124
Identity = 207/424 (48.82%), Postives = 282/424 (66.51%), Query Frame = 1 
Query:    7 RRMSSFVQKYAWGKPGDQSVVASLKAAGDKSYKVDADEPYAEMWIGTHPSGPSNLL---------TNSGNVGPLLKDHLTSEPDALGDIAHKGDLPFLFKVISINKALSIQAHPNKKLAERLHAKRPDVYADDNHKPEMAVTLSDFEALCGFRPFMEIIWNLHFFPELLALVSLEAIHQMMTAGDDVERQKFALRELFRSYNNAPDEKVRTQVDLLVARLDWASGIPRVDEVEFNEGEVKMSHGEGRDEEEQKAQFTETMF--DSRFRQGSLAAEALDKRMKKENPDVIRVMLRLSTEYPGDLGILMPLVLNLLMLKTGKAFFMTVDEPHAYLRGDILECMACSNNVVRCALTPKFRDVDLLVDMLSYNMAAPAVLHPNIVDENRKRFTPPVADFEIEDIHVPANDVYGLEPMPVPAVLVTLKG 1245
            RR++  VQ YAWGK G  S+V+ LK   ++ ++ + D+ YAE+W+GTHP+GPS ++            G+ G  L + L + P  LGD+  +GDLPF+FKV+SI+KALSIQAHP+KKLAERL+A RPD+Y DDNHKPEMAV LSDFE LCGFRPF EI++NLH +PEL  LVSL A+  M +  +D E Q+ ALR+LF+SY  A  E V TQV+ LV RL       R D+  F   E  + H +  + +       E ++  D  +R+     E +  R++ E+  V  +M RLS EYPGD+GI+MPL+LN L +  G++FFM  +EPHAYL+GDI+E MA S+NVVR ALTPK RDV LL ++L+YNM AP ++ P  VD+   RFTPP+ DFE++D+ VP    Y    +PVP++ + L+G
Sbjct:    2 RRLNCAVQNYAWGKRGKDSMVSKLKMMENEGFETEDDKTYAELWMGTHPNGPSRVMPEPGDFSEGAEEGHAGIFLIELLETHPHYLGDLQEQGDLPFMFKVLSIDKALSIQAHPDKKLAERLYATRPDLYKDDNHKPEMAVALSDFEGLCGFRPFEEIVFNLHRYPELRGLVSLSAMRAMCSLPEDPEDQRDALRKLFQSYITAKPEVVATQVNALVQRLG-----ERADDGGFMSDE-SLDHTDHEEID------MEDIYGADYEYRE---KGEMMLGRLRTEDYYVQDLMRRLSKEYPGDIGIMMPLLLNYLRMGEGESFFMAANEPHAYLKGDIMEVMARSDNVVRVALTPKHRDVPLLCEILTYNMGAPPIVAPIQVDQCCHRFTPPIKDFELDDMKVPEGSEYTPLAIPVPSICMVLEG 410
[Close]
BLAST of mRNA_M-pyrifera_M_contig8162.19105.1 vs. uniprot
Match: A0A835YY41_9STRA (Mannose-6-phosphate isomerase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YY41_9STRA)

HSP 1 Score: 342 bits (878), Expect = 8.210e-111
Identity = 187/409 (45.72%), Postives = 263/409 (64.30%), Query Frame = 1 
Query:   97 SYKVDADEPYAEMWIGTHPSGPSNLL------TNSGNV---GPLLKDHLTSEPDALGDIAHKGDLPFLFKVISINKALSIQAHPNKKLAERLHAKRPDVYADDNHKPEMAVTLSDFEALCGFRPFMEIIWNLHFFPELLALVSLEAIHQMMTAGDDVERQKFALRELFRSYNNAPDEKVRTQVDLLVARLDWASGIPRVDEVEFNEGEVKMSHGEGRDEEEQKAQFTETMFDSRFRQGS---LAAEALDKRMKKENPDVIRVMLRLSTEYPGDLGILMPLVLNLLMLKTGKAFFMTVDEPHAYLRGDILECMACSNNVVRCALTPKFRDVDLLVDMLSYNMAAPAVLHPNIVDENRKRFTPPVADFEIEDIHVPANDVYGLEPMPVPAVLVTLKGTQGGLLLDEDTGKE 1287
            +++V  DE YAE+W+GTHP+GPS +       ++ G+    G  L + L + P  LGD+   GDLPF+FK++SI KALSIQAHP+K+ AE+L+A RPD+Y DDNHKPEMAV LS+FE LCGFRPF E++++LH +PEL  +VSL A+  ++   +D+ RQ+ AL +LF SY  A    +RTQ+ L    LDW +G     +     GE   +     ++E +  +    +       G    L A  + +R++ E   + ++MLRL+ EYPGD+GI+MPL+LN L L+ G+AFFM  +EPHAYLRGDI+E MA S+NVVR ALTPK+RDV LL D+L+Y M AP ++ P  V     RFTPPVADFE+E + +P    +  + + VP++ + L GT  G   D+D G E
Sbjct:    8 AWQVQEDENYAELWMGTHPNGPSRVAPEDSESSDDGDAQRPGMFLIELLETNPSVLGDLEEVGDLPFMFKILSIAKALSIQAHPDKQTAEKLYASRPDLYRDDNHKPEMAVALSEFEGLCGFRPFHEMVYSLHRYPELRGVVSLAAVKAILDVPEDIGRQQAALHKLFVSYMKAKPAVIRTQLRL----LDWHTGFALTSQNFGTIGEGLWNASAEAEDEVELEEMLGKVICLAAGDGECPGLTARTMLRRLRAEERSIHKLMLRLNEEYPGDIGIMMPLLLNYLRLEPGQAFFMGANEPHAYLRGDIMEVMARSDNVVRVALTPKYRDVPLLCDILTYKMGAPPLVLPRRVSPYCLRFTPPVADFELEVVTLPHAQQFSFDSIKVPSIFLVLGGT--GWATDDDGGAE 410
[Close]
BLAST of mRNA_M-pyrifera_M_contig8162.19105.1 vs. uniprot
Match: A0A7S3YFD0_HETAK (Mannose-6-phosphate isomerase (Fragment) n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3YFD0_HETAK)

HSP 1 Score: 310 bits (794), Expect = 3.770e-99
Identity = 178/418 (42.58%), Postives = 246/418 (58.85%), Query Frame = 1 
Query:   25 VQKYAWGKPGDQSVVASLKAAGDKSYKVDADEPYAEMWIGTHPSGPSNLLTNSGNVGPLLKDHLTSEPDALGDIAHKGDLPFLFKVISINKALSIQAHPNKKLAERLHAKRPDVYADDNHKPEMAVTLSD-FEALCGFRPFMEIIWNLHFFPELLALVSLEAIHQMMTAGDDVERQKF----ALRELFRSYNNAPDEKVRTQVDLLVARLDWASGIPRVDEVEFNEGEVKMSHGEGRDEEEQKAQFTETMFDSRFRQGSLAAEALDKRMKKENPDVIRVMLRLSTEYPGDLGILMPLVLNLLMLKTGKAFFMTVDEPHAYLRGDILECMACSNNVVRCALTPKFRDVDLLVDMLSYNMAAPAVLHPNIV--DENRKRFTPPVADFEIEDIHVPANDVYGLEPMPVPAVLVTLKGTQGG 1257
            VQ YAWGKP  +++VA+LK A D  Y VD +  YAE+W+GTHP+GPS++  + G     LKD +T  PD+LGD+A +GD+PF+FKV+SINKALSIQ+HP+K LA+ LHA  PD Y D NHKPE+A+ LS+ FEA+CGFRP  +I+ N+  FPEL AL+S +A+  +       + QK     ALRELF SY +A +E    Q+D LVARL                         G+D  + +A   +T+  +                         +++RLS ++PGD G++ P+  N L L+ G++ F+  +EPHAYL G+ILECMA S+NVVR  LTPKF D D L  ML+Y    P +    +   D  R+R+  PV +FE+  + VPA + Y LE +P P  L+ L G   G
Sbjct:    8 VQTYAWGKPASEALVAALKNAEDSDYTVDLEAYYAELWMGTHPNGPSSIRRDGGFDAVDLKDWITKHPDSLGDLAEEGDIPFMFKVLSINKALSIQSHPDKDLAKMLHAAYPDRYKDPNHKPEIAIALSENFEAMCGFRPIEDILANIRKFPELNALLSTQALELLEQCERFPQAQKLVHKIALRELFTSYLHAQEELAVEQLDRLVARLKEELA--------------------GKDLSDPEALSDDTLLKN-------------------------LIVRLSGQFPGDRGMMAPIFFNYLRLRRGESIFLPANEPHAYLSGEILECMASSDNVVRAGLTPKFIDRDTLCAMLTYRARLPKIRPGKVKAGDPWRQRYYTPVEEFEVALVDVPAGERYTLEAIPSPTFLLVLGGEGTG 380
[Close]
BLAST of mRNA_M-pyrifera_M_contig8162.19105.1 vs. uniprot
Match: A0A0R5QPG6_SACJA (Mannose-6-phosphate isomerase n=1 Tax=Saccharina japonica TaxID=88149 RepID=A0A0R5QPG6_SACJA)

HSP 1 Score: 299 bits (765), Expect = 2.140e-95
Identity = 163/343 (47.52%), Postives = 220/343 (64.14%), Query Frame = 1 
Query:    7 RRMSSFVQKYAWGKPGDQSVVASLKAAGDKSYKVDADEPYAEMWIGTHPSGPSNLLTNSGN---------VGPLLKDHLTSEPDALGDIAHKGDLPFLFKVISINKALSIQAHPNKKLAERLHAKRPDVYADDNHKPEMAVTLSDFEALCGFRPFMEIIWNLHFFPELLALVSLEAIHQMMTAGDDVERQKFALRELFRSYNNAPDEKVRTQVDLLVARL------DWASGIPRVDEVEFNEGEVKMSHGEGRDEEEQKAQFTETMFDSRFRQGSLAAEALDKRMKKENPDVIRVMLRLSTEYPGDLGILMPLVLNLLMLKTGKAFFMTVDEPHAYLRGDILE 990
            RR++  VQ YAWGK G  S+VA LK   ++ ++ +  + YAE+W+GTHP+GPS ++  +G+          G  L + L + P  LGD+   GDLPF+FKV+SINKALSIQAHP+KKLAERL+A RPD+Y DDNHKPEMAV LSDFE LCGFRPF EI++NLH +PEL  LVSL A+  M +  +D+E ++ ALR+LF SY  A  E V TQV  LV RL         S    VD  +  E +++  +GEG + +E+   F                    +R++ E+  V  +M RLS EYPGD+GI+MPL+LN + +  G++FFM  +EPHAYL+GDI+E
Sbjct:    2 RRLNCPVQNYAWGKRGSDSMVAKLKTLENEGFETEEGKMYAELWMGTHPNGPSRVMPEAGDFVEGAEEGHAGIFLIELLETHPHYLGDLEKLGDLPFMFKVLSINKALSIQAHPDKKLAERLYATRPDLYKDDNHKPEMAVALSDFEGLCGFRPFEEIVFNLHRYPELRGLVSLSAMRAMCSLPEDLEERRDALRKLFHSYITAKPEVVTTQVKALVQRLGSRVDESGFSSDGSVDHTDDEEIDLEDIYGEGYEHKEKGEMFL-------------------RRLRAEDYYVQDLMRRLSDEYPGDIGIMMPLLLNYMRMGEGESFFMAANEPHAYLKGDIME 325
[Close]
BLAST of mRNA_M-pyrifera_M_contig8162.19105.1 vs. uniprot
Match: W7TSQ9_9STRA (Mannose-6-phosphate isomerase n=3 Tax=Monodopsidaceae TaxID=425072 RepID=W7TSQ9_9STRA)

HSP 1 Score: 299 bits (766), Expect = 4.590e-94
Identity = 178/428 (41.59%), Postives = 247/428 (57.71%), Query Frame = 1 
Query:   10 RMSSFVQKYAWGKPGDQSVVASLKAAGDKSYKVDADEPYAEMWIGTHPSGPSNLLTNSGNVGPLLKDHLTSEPDALGDIAHKG-DLPFLFKVISINKALSIQAHPNKKLAERLHAKRPDVYADDNHKPEMAVTLSDFEALCGFRPFMEIIWNLHFFPELLALVSLEAIHQMMT----AGDDVERQKFALRELFRSYNNAPDEKVRTQVDLLVARLDWASGIPRVDEVEFNEGEVKMSHGEGRDEEEQKAQFTETMFDSRFRQGSLAAEALDKRMKKENPDVIRVMLRLSTEYPGDLGILMPLVLNLLMLKTGKAFFMTVDEPHAYLRGDILECMACSNNVVRCALTPKFRDVDLLVDMLSYNMAAPAVLHPNIV----DENRKRFTP--PVADFEIEDIHVP-----ANDVYGLEPMPVPAVLVTLKG 1245
            R+   +Q Y WGKPG +S VA LK  GD  ++   D  YAE+W+GTHPSGPS ++  +G    LLKD+L + P+A G  +  G DLPF+FKV+SI KALSIQAHP+K+ AE LHA RP VY D NHKPEMA++L+ FEALCGFRP  E++ +   FPE  ALV  + ++ +      +G +VE ++ ALR++F SY  AP+E+   ++  LVARL+      R  E+E + GE                                A + L+            ++LRL   YPGD G+L PL LN + L  GKAF M  +EPHAYL GDILECMACS+NVVR  LTPK+RDV  L++ML+    A AV    ++     +  + F+P   + +FE+E I +       +  +  + +  P++LV L+G
Sbjct:    3 RLECAIQTYDWGKPGLESAVAQLKQEGDDHFEAQQDTRYAELWMGTHPSGPSTVIVPAGPKKILLKDYLDAHPEATGSASVAGGDLPFMFKVLSIAKALSIQAHPDKRRAEELHATRPQVYKDANHKPEMAISLTPFEALCGFRPLAELLSHFSSFPEFKALVDSDLVNALAMVAEGSGKEVEAKE-ALRKVFSSYMEAPEERAMAELSALVARLE------RKQEIERDAGE--------------------------------AHDPLES-----------LILRLKAHYPGDRGVLCPLFLNYVRLGPGKAFVMEANEPHAYLSGDILECMACSDNVVRVGLTPKYRDVPTLLEMLTCASGAMAVTEGEVLAKQEGQEHRLFSPGASIPEFEVETIKLEKTTGGCSAPFAWKGVDGPSLLVVLEG 380
[Close]
BLAST of mRNA_M-pyrifera_M_contig8162.19105.1 vs. uniprot
Match: D7FIF1_ECTSI (Mannose-6-phosphate isomerase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FIF1_ECTSI)

HSP 1 Score: 295 bits (754), Expect = 6.180e-94
Identity = 164/337 (48.66%), Postives = 219/337 (64.99%), Query Frame = 1 
Query:    7 RRMSSFVQKYAWGKPGDQSVVASLKAAGDKSYKVDADEPYAEMWIGTHPSGPSNLL---------TNSGNVGPLLKDHLTSEPDALGDIAHKGDLPFLFKVISINKALSIQAHPNKKLAERLHAKRPDVYADDNHKPEMAVTLSDFEALCGFRPFMEIIWNLHFFPELLALVSLEAIHQMMTAGDDVERQKFALRELFRSYNNAPDEKVRTQVDLLVARLDWASGIPRVDEVEFNEGEVKMSHGEGRDEEEQKAQFTETMFDSRFRQGSLAAEALDKRMKKENPDVIRVMLRLSTEYPGDLGILMPLVLNLLMLKTGKAFFMTVDEPHAYLRGDILE 990
            RR++  VQ YAWGK G  S+V+ LK   ++ ++ + D+ YAE+W+GTHP+GPS ++            G+ G  L + L + P  LGD+  +GDLPF+FKV+SINKALSIQAHP+KKLAERL+A RPD+Y DDNHKPEMAV LSDFE LCGFRPF EI++NLH +PEL  LVSL A+  M +  +D E Q+ ALR+LF+SY  A  E   TQV+ LV RL       R D+  F   E  + H +   EE          ++ R +      E +  R++ E+  V  +M RLS EYPGD+GI+MPL+LN L +  G++FFM  +EPHAYL+GDI+E
Sbjct:    2 RRLNCAVQNYAWGKRGKDSMVSKLKMMENEGFETEEDKTYAELWMGTHPNGPSRVMPEPGDFSAGAEEGHAGIFLIELLETHPHYLGDLQEQGDLPFMFKVLSINKALSIQAHPDKKLAERLYATRPDLYKDDNHKPEMAVALSDFEGLCGFRPFEEIVFNLHRYPELRGLVSLSAMRAMCSLPEDPEDQRDALRKLFQSYITAKPEVGATQVNALVQRLG-----ERADDGGFMSDE-SLDHTDH--EEIDMEDIYGADYEHREK-----GEMMLGRLRTEDYYVQDLMRRLSKEYPGDIGIMMPLLLNYLRMGEGESFFMAANEPHAYLKGDIME 325
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig8162.19105.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A0R5QMD0_SACJA1.080e-30596.51Mannose-6-phosphate isomerase n=1 Tax=Saccharina j... [more]
D8LB30_ECTSI3.970e-25883.14Mannose-6-phosphate isomerase n=1 Tax=Ectocarpus s... [more]
D7FPP3_ECTSI1.880e-15551.84Mannose-6-phosphate isomerase n=2 Tax=Ectocarpus T... [more]
A0A0R5QMD6_SACJA6.400e-14446.89Mannose-6-phosphate isomerase n=2 Tax=Saccharina j... [more]
A0A6H5KTB4_9PHAE3.710e-12448.82Mannose-6-phosphate isomerase n=1 Tax=Ectocarpus s... [more]
A0A835YY41_9STRA8.210e-11145.72Mannose-6-phosphate isomerase n=1 Tax=Tribonema mi... [more]
A0A7S3YFD0_HETAK3.770e-9942.58Mannose-6-phosphate isomerase (Fragment) n=1 Tax=H... [more]
A0A0R5QPG6_SACJA2.140e-9547.52Mannose-6-phosphate isomerase n=1 Tax=Saccharina j... [more]
W7TSQ9_9STRA4.590e-9441.59Mannose-6-phosphate isomerase n=3 Tax=Monodopsidac... [more]
D7FIF1_ECTSI6.180e-9448.66Mannose-6-phosphate isomerase n=1 Tax=Ectocarpus s... [more]

Pages

back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig8162contigM-pyrifera_M_contig8162:1788..7934 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-19
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score721.5
Seed ortholog evalue2.4e-205
Seed eggNOG ortholog2880.D8LB30
Preferred nameMPI
KEGG rclassRC00055,RC00376,RC00523
KEGG koko:K01809,ko:K01886
KEGG ReactionR01819,R03652
KEGG Pathwayko00051,ko00520,ko00970,ko01100,ko01110,ko01130,map00051,map00520,map00970,map01100,map01110,map01130
KEGG ModuleM00114,M00359,M00360
Hectar predicted targeting categoryother localisation
GOsGO:0000003,GO:0000032,GO:0001101,GO:0003006,GO:0003674,GO:0003824,GO:0004476,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005975,GO:0005996,GO:0006002,GO:0006013,GO:0006056,GO:0006057,GO:0006082,GO:0006090,GO:0006091,GO:0006096,GO:0006139,GO:0006163,GO:0006164,GO:0006165,GO:0006464,GO:0006486,GO:0006725,GO:0006732,GO:0006733,GO:0006753,GO:0006754,GO:0006757,GO:0006766,GO:0006767,GO:0006793,GO:0006796,GO:0006807,GO:0007275,GO:0007584,GO:0008150,GO:0008152,GO:0009056,GO:0009058,GO:0009059,GO:0009100,GO:0009101,GO:0009108,GO:0009110,GO:0009117,GO:0009123,GO:0009124,GO:0009126,GO:0009127,GO:0009132,GO:0009135,GO:0009141,GO:0009142,GO:0009144,GO:0009145,GO:0009150,GO:0009152,GO:0009156,GO:0009161,GO:0009165,GO:0009166,GO:0009167,GO:0009168,GO:0009179,GO:0009185,GO:0009199,GO:0009201,GO:0009205,GO:0009206,GO:0009225,GO:0009226,GO:0009259,GO:0009260,GO:0009298,GO:0009314,GO:0009416,GO:0009605,GO:0009628,GO:0009636,GO:0009642,GO:0009646,GO:0009743,GO:0009744,GO:0009790,GO:0009791,GO:0009793,GO:0009987,GO:0009991,GO:0010033,GO:0010035,GO:0010038,GO:0010043,GO:0010154,GO:0014070,GO:0016043,GO:0016051,GO:0016052,GO:0016053,GO:0016310,GO:0016853,GO:0016860,GO:0016861,GO:0017085,GO:0017144,GO:0018130,GO:0019309,GO:0019318,GO:0019320,GO:0019359,GO:0019362,GO:0019363,GO:0019438,GO:0019439,GO:0019538,GO:0019637,GO:0019673,GO:0019693,GO:0019752,GO:0019852,GO:0019853,GO:0022414,GO:0031505,GO:0031506,GO:0031667,GO:0032025,GO:0032501,GO:0032502,GO:0032787,GO:0033273,GO:0033591,GO:0034284,GO:0034285,GO:0034404,GO:0034641,GO:0034645,GO:0034654,GO:0034655,GO:0036211,GO:0042221,GO:0042364,GO:0042493,GO:0042546,GO:0042866,GO:0043170,GO:0043412,GO:0043413,GO:0043436,GO:0044036,GO:0044038,GO:0044085,GO:0044237,GO:0044238,GO:0044248,GO:0044249,GO:0044260,GO:0044267,GO:0044270,GO:0044271,GO:0044281,GO:0044282,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0045229,GO:0046031,GO:0046034,GO:0046364,GO:0046365,GO:0046390,GO:0046394,GO:0046434,GO:0046483,GO:0046496,GO:0046680,GO:0046686,GO:0046700,GO:0046939,GO:0048316,GO:0048608,GO:0048731,GO:0048856,GO:0050896,GO:0051186,GO:0051188,GO:0055086,GO:0061458,GO:0061611,GO:0061615,GO:0061619,GO:0070085,GO:0070589,GO:0071554,GO:0071555,GO:0071704,GO:0071840,GO:0071852,GO:0072330,GO:0072521,GO:0072522,GO:0072524,GO:0072525,GO:0090407,GO:1901135,GO:1901137,GO:1901292,GO:1901293,GO:1901360,GO:1901361,GO:1901362,GO:1901564,GO:1901566,GO:1901575,GO:1901576,GO:1901700
EggNOG free text desc.mannose-6-phosphate isomerase activity
EggNOG OGsCOG1482@1,KOG2757@2759
Ec32 ortholog descriptionMannose-6-phosphate isomerase
Ec32 orthologEc-27_005440.1
EC5.3.1.8,6.1.1.18
COG Functional cat.G
BiGG ReactioniRC1080.CRv4_Au5_s2_g9754_t1
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko00002,ko01000,ko01007,ko03016
Exons9
Model size1290
Cds size1290
Stop0
Start1
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622816723.5208626-CDS-M-pyrifera_M_contig8162:1787..18171622816723.5208626-CDS-M-pyrifera_M_contig8162:1787..1817Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig8162 1788..1817 +
1692278141.2053528-CDS-M-pyrifera_M_contig8162:1787..18171692278141.2053528-CDS-M-pyrifera_M_contig8162:1787..1817Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig8162 1788..1817 +
1622816723.531678-CDS-M-pyrifera_M_contig8162:2216..23931622816723.531678-CDS-M-pyrifera_M_contig8162:2216..2393Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig8162 2217..2393 +
1692278141.2160907-CDS-M-pyrifera_M_contig8162:2216..23931692278141.2160907-CDS-M-pyrifera_M_contig8162:2216..2393Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig8162 2217..2393 +
1622816723.5419962-CDS-M-pyrifera_M_contig8162:2861..29661622816723.5419962-CDS-M-pyrifera_M_contig8162:2861..2966Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig8162 2862..2966 +
1692278141.2308445-CDS-M-pyrifera_M_contig8162:2861..29661692278141.2308445-CDS-M-pyrifera_M_contig8162:2861..2966Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig8162 2862..2966 +
1622816723.5529625-CDS-M-pyrifera_M_contig8162:3697..39011622816723.5529625-CDS-M-pyrifera_M_contig8162:3697..3901Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig8162 3698..3901 +
1692278141.2412999-CDS-M-pyrifera_M_contig8162:3697..39011692278141.2412999-CDS-M-pyrifera_M_contig8162:3697..3901Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig8162 3698..3901 +
1622816723.5665188-CDS-M-pyrifera_M_contig8162:4430..46281622816723.5665188-CDS-M-pyrifera_M_contig8162:4430..4628Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig8162 4431..4628 +
1692278141.2502933-CDS-M-pyrifera_M_contig8162:4430..46281692278141.2502933-CDS-M-pyrifera_M_contig8162:4430..4628Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig8162 4431..4628 +
1622816723.5771809-CDS-M-pyrifera_M_contig8162:5435..55331622816723.5771809-CDS-M-pyrifera_M_contig8162:5435..5533Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig8162 5436..5533 +
1692278141.2638009-CDS-M-pyrifera_M_contig8162:5435..55331692278141.2638009-CDS-M-pyrifera_M_contig8162:5435..5533Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig8162 5436..5533 +
1622816723.5877218-CDS-M-pyrifera_M_contig8162:6069..62471622816723.5877218-CDS-M-pyrifera_M_contig8162:6069..6247Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig8162 6070..6247 +
1692278141.2730033-CDS-M-pyrifera_M_contig8162:6069..62471692278141.2730033-CDS-M-pyrifera_M_contig8162:6069..6247Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig8162 6070..6247 +
1622816723.5984838-CDS-M-pyrifera_M_contig8162:7059..72451622816723.5984838-CDS-M-pyrifera_M_contig8162:7059..7245Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig8162 7060..7245 +
1692278141.2816923-CDS-M-pyrifera_M_contig8162:7059..72451692278141.2816923-CDS-M-pyrifera_M_contig8162:7059..7245Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig8162 7060..7245 +
1622816723.60963-CDS-M-pyrifera_M_contig8162:7820..79341622816723.60963-CDS-M-pyrifera_M_contig8162:7820..7934Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig8162 7821..7934 +
1692278141.2905672-CDS-M-pyrifera_M_contig8162:7820..79341692278141.2905672-CDS-M-pyrifera_M_contig8162:7820..7934Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig8162 7821..7934 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig8162.19105.1prot_M-pyrifera_M_contig8162.19105.1Macrocystis pyrifera P11B4 malepolypeptideM-pyrifera_M_contig8162 1788..7934 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_M-pyrifera_M_contig8162.19105.1

>prot_M-pyrifera_M_contig8162.19105.1 ID=prot_M-pyrifera_M_contig8162.19105.1|Name=mRNA_M-pyrifera_M_contig8162.19105.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=430bp
MARRMSSFVQKYAWGKPGDQSVVASLKAAGDKSYKVDADEPYAEMWIGTH
PSGPSNLLTNSGNVGPLLKDHLTSEPDALGDIAHKGDLPFLFKVISINKA
LSIQAHPNKKLAERLHAKRPDVYADDNHKPEMAVTLSDFEALCGFRPFME
IIWNLHFFPELLALVSLEAIHQMMTAGDDVERQKFALRELFRSYNNAPDE
KVRTQVDLLVARLDWASGIPRVDEVEFNEGEVKMSHGEGRDEEEQKAQFT
ETMFDSRFRQGSLAAEALDKRMKKENPDVIRVMLRLSTEYPGDLGILMPL
VLNLLMLKTGKAFFMTVDEPHAYLRGDILECMACSNNVVRCALTPKFRDV
DLLVDMLSYNMAAPAVLHPNIVDENRKRFTPPVADFEIEDIHVPANDVYG
LEPMPVPAVLVTLKGTQGGLLLDEDTGKEV
back to top

mRNA from alignment at M-pyrifera_M_contig8162:1788..7934+

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_M-pyrifera_M_contig8162.19105.1 ID=mRNA_M-pyrifera_M_contig8162.19105.1|Name=mRNA_M-pyrifera_M_contig8162.19105.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=6147bp|location=Sequence derived from alignment at M-pyrifera_M_contig8162:1788..7934+ (Macrocystis pyrifera P11B4 male)
ATGGCGCGGCGCATGTCAAGCTTCGTTCAGGTGAATTACGAACCGCTCAT
ACACACGGTGGGAATTTATGAGCATGCATATGCGCGGTGGGACTGCTGGA
TGTGGATCGCGAGCAGGTGTAGGAATATATGACGCACAGCAGCAGTCCAG
TGCGAGCCCAATGCTCTGTGAGACTACTCACGAGTACTTCGCCGTCATGT
CATGAGATAGTTTGAGTGTCCAGCTGTACGTACTGTAAATGTATGCGCAT
AACCAACGTTGCGTGTGATGTTGGAGATCGGGCAAAAGTTACGTTCACAT
CGTCGCCGCCCGACCAAGCACATACAAATCTGGGACCTAGCGCTATGGCT
CGCCGTAAGGCGTTATATGCACCGCACTTGCACGCCGAGACTTTGACAAC
TTCTGTTCCATCGCTTCTACCGAGGCCAGAAATATGCCTGGGGAAAGCCG
GGCGACCAGAGCGTGGTGGCGAGCTTGAAGGCTGCCGGTGACAAATCCTA
CAAAGTAGACGCCGACGAGCCGTACGCAGAGATGTGGATCGGAACGCATC
CCAGCGGCCCCTCCAACCTGCTCACCAACAGCGGAAACGTCGGGCCTCTT
CTCAAGGTGGTGTTATCGCATGCATCACTCCTTTCTCTGTTTCAGGGGGA
TGATAGATGCAAGGCCCGCTTGCGGCTCAACGATACTGCAGTTTTTTTCA
TCGCCGGTATTTACTTACAGCAAGTATGAACGCAGAGCTATGCATGCGCC
TTGAGGCCGCAAGCAATGATCGTTTACAAACACTAAGAAAATCCCGTGTG
TGCGTATCACTGCAAATTGCAAAGTGGCAGCAGTCAAGACGTCTTGAGCA
TCCCCTATTTCCTGACATTTGTCCCGCCCGCCAGAAGCTTAGCGTCACGT
AGCCTGTTAAGTCTAAACTCTCATCACAGCTTACATTGCTACGTATGTAT
CCCATATGGCACTCCGTCACACGAATCCCTCATCCTTGTTGCTAGATGCA
GAAGTCAGGCACTGTTCATGACTCTTCGGGCTCTTGCTCGGCTTCGCTCG
TTCGCGCGCGCTGGTTTGCTGCAGGATCACCTCACTTCCGAACCCGACGC
TCTGGGTGACATAGCCCACAAAGGAGACCTTCCGTTTCTCTTCAAGGTTA
TTTCCATCAACAAAGCTCTGAGCATCCAGGTGAGCCGGCCGAAACACACT
CGCCTACGTAAGCTGGCCTGGATCGTCTAAGAATGCGTACCTGGCGCGAA
ATACCACGAGATTAACCGACCAGACGAAGTTACAGTAGGTCGGTTGAAGA
TTTTCCCTAAATTAGTACGACCCAGAGCGTTATGTTTCCCCCCTTTGTTG
TTCACGAACACGTAACGATATGTAGCCCCCTGCATTTTTTGGCCGAAAAT
GCCTCAAAGGTCAAGAAGGCCGACAGAAAGTTGTGCAATGCCCGTTCTGA
CTGGTCGATCCATAACAAGTTGTTGGTCGTCTTAAGATCACTATACGCAC
ACGTCGAACACGCTAGAAAGTTATTAACCCCGAGTCAGGCAACCGAATGG
GGCGAATGTGAATTATTCTTATAGTTACGCACGTCCAGTCTGACCGACTG
TGTAGACTCCGGCTTGTGCTTGCGCTCTTGCAGAGTAGCGGTAGTTTTTT
TGGCTTGGCTCGGAGTTACTCAGACTAGGGACCTCTGGATTAGGGGGTTT
GGATCACGCCTGTCTTGTGTGTGATTGCTCCTGCACAAAATCAGGCTCCA
TCGCAAAACGTGGTTCAGCACTTCGGCCGCAAATGGACAGGTCGCGCCTG
ACGTTTAATGACTGAACGCTTGGCGACGGCCAACGAATATATATATATGC
ATATTGCGCGGCAAACAAAAACAGCGGCTACCCCCGCGTGTTTGGTGCGC
TCCCTGACAGGCGCACCCTAACAAGAAGCTCGCTGAGAGGCTCCATGCCA
AGAGACCCGACGTCTACGCGGATGACAACCACAAGCCGGAGATGGCGGTG
ACGCTGTCCGACTTCGAGGCCCTCTGCGGCTTCCGTCCCTTCATGGAAAT
AATCTGGAACCTGCACTTCTTTCCGGAGCTGCTCGCCCTCGTGTCTCTCG
AAGCCATCCACCAGGTGTGTCTATCAAAACATGTGAACAGCGGCCGATAG
GGGTCATGGGGCGAGCGCTTGACGTTTGAAGCACGCCCGCCGATGATGAC
ATGCAGCGGCGGTGACACGGATCGTGCTCGGCAACCTGTTTAACGTATTA
AAATGATTAATAATGAAGAGGCTAGCATGCGAAAAAGAGCAAAAAGGGAA
ACGCCTGTCGACGTGCGTTCGAGTTTCAGCGTCAAACTCTCCTCAAGAGC
TCGTCTGAACATCCGTTGTGCGTCATCTAAGTTAAAACCATTGCTTCCGC
TCTAAACCGTTTGATGTACCGCAGCGATTTGATGGTTTGGGGCTACGCAA
TCGTTTTTTAGTTTTACGTGCTACACAATCGGTGCCTGCCGTACCACGCT
TGAAACATCTCCTGTAGTCTGAACAGTAATATCGGAATGCATCACCCACC
GGCAGATGGTCATCGTAAATTTAATAATACCATGTGGCCTAATCAAGTGA
ATGAAGGGTACAACGTTCATGCTCAACGCCGCATGAAAACCAGATGATGA
CGGCCGGCGACGATGTGGAGAGGCAAAAGTTTGCTCTTCGAGAACTCTTC
CGCTCCTACAACAATGCCCCCGACGAAAAAGTGAGAACTCAGGTGGACCT
TTTGGTCGCCAGGCTGGACTGGGCATCCGGCATCCCTCGAGTCGACGAGG
TCGAATTCAACGAGGGAGAAGTCAAGATGAGCCACGGGGAGGTAAGCAAC
TGACGTGAAGGAACGTTCTATTCGAGTGCCACTACTGTTGCACGCATGGT
CGACGGAAACGGAAATCGACAATTGATGTGGACCGGCATGTCTCCCGCTT
TCCAACGTTCATGTTCGGTAAATTTTGACTGCGCCGTGAGTGGTTGGCGG
GCGGTAGCGAGCAACAAATACGTGCTGTACCTCGCGAGAAGACCTCGAAA
ATTAGTTTAAGAAAACCCGTGGAGATCCAGCGACCTCGTGGAGATCCAAG
CGGCGTTATCTCGCCAACTGCGGCGGCTGTCGCCTCAAGCTATATGCGAC
ATTAAACGTTTAGCTAGAACACCCCCAGACACACAACTCATTTGGGGAGG
GGAGGGTGGGGGGATCGAAGAGGGGGGGCAAGGAATCGTTCTACTGGTTC
CACCAGCTGCAATTCGCAAGAAACGTTAAGGGTTCACCCTGGTGCAGTGC
CTAATGGCTACTAATAGCCCACTTGGTGACTGAGTGGAAGTAGGATACCC
CTTACCACCAACAAAATGTGTACGTTGTTCGACTCGGTCTCGGCGTTGAT
CTCCGGGACGAACCCCTCGCCACGCGCTGATGGTCTGAGAAATGAACAAA
CTTTGAGCCTTTTTCAACCTAGAATAATAAATGATCATGCTGGGACTCGA
ACCCACGCATGCCATGCTCAGAAGCGGACGATCTACCCACCAAGCCAACC
TGCGCTGACCGAGTAGATAAATAGGTTATCCCTTGTGACCAACGCACCCG
TCGCTGTCGATTCGGATCGTTACGACTGCGCTTTATTCGTCACCTCAGGG
GAGAGACGAGGAGGAGCAGAAGGCCCAGTTTACGGAAACAATGTTCGACA
GCCGGTTTCGGCAGGGGTCCCTTGCGGCAGAGGCTTTGGACAAAAGGTGA
GCGTGTAAAAACTTGGGGATCTTGGCGGGCAGTGGGCACGACTAGAGGAG
AAACCAGTGGGCGCGACCCCATGGGGTGTTCTAGACAGAGTAGTATGTTG
AGGACACCCGGGTTAGGATAGAGGTGTGGCGATTCCCGCAGGGAGTCAGA
CAACTCTTGCCACAGTATTACACACAGAGAGGGGTTACCTAGAAAAATCA
ATCGACAGGGTGATCATAGTTGCGGAAGGGAGATCCTCGAAGCCTCTTTC
CTGTGTGTTGAGTTGAGACACCGGAACCACCCAGCTGGACCGTAGTGGTT
CCACTTTTCTCAACGGTTCGAGGATAGGAGAGGAGTTGTGATGAGGGGAA
AGCAACACGCGACGCGCGGAGTGTTCAATTCTCACGTCACTCTAAAAAAC
ACCTGGTAGCATAATCAGGGACAACATCAAGGACTTATGCTTGTTCCCGT
CTTCGACTGTACCGATTGGCTAGAGATTGTCATAGTCACCCCCACCATGT
GTTGTCTCCGCCGTGGCCGCGAACTCGTTCAGGATGAAAAAGGAAAACCC
CGATGTGATCCGCGTGATGCTACGGTTGTCTACCGAATACCCGGGAGATC
TCGGCATTCTGATGCCCTTGGTGCTCAACCTGCTGATGCTCAAGACTGGC
AAGGCGTTCTTTATGACGGTCGACGAGCCCCACGCCTACCTTCGCGGGGA
TATTCTCGAGGTACTGCTTCTGTTGTCATGCGTGCCGCGCTGAAAAGCGT
AAGGTCCGTGAGAAATACATGCCCAAAACAAGCTGTATGCATATGTTACG
CTGACCGGTCTACTAAAATACTGCAATGTAAGCGTCGGCCCGTCCAAGAC
GACAAATAACCACAGCGTAGGATTATGTTTCCCGAAAGAGTCCACGGGAG
GGCAGGGCTTCACTTTGCCATAGACTGGAACAAGGCTACCAATAGAGCTC
TGGGTGTAGATGCGCCCGTGAAGGGTGGACGTGTATGATACGGAGCAGAA
GGACCAGAGGAAATACTGTAGAATCATCACACTGCACAGATATTGTGCAG
CGTCGGGTAATTCCGTTGCTGTACGCTATGTTGTGTCTCTCGCGAAAGCA
CGCTCGTACTCTGCCCCCTTTCATACGCGGAACTTCAATAATCGAGTTCA
AAGCACCAACTTATCCAGTCCTATAAAAGCCGCTATCAAACACTCCGTTT
TCGCATCATCATAGGTTTTCCGCGATGTTGCAAGAGACGTATTGAGCTGT
TGCCTGTGGGGTTGCATCGCGAAACGTAAGGCTTGCTTTATGGAACTGTT
GGGGACTGTCAGGAAGAGCTCCGACCCCGGAAGGGCGTTCCTCATGCCTC
AACAGAGCACACCTCTTGCTGCAGCCTACCTTGTATATCATTCTATTGCC
CTGCAGGAAAAACATGTATCCGTTGTCTCCATCTCCCGCTTCCATCCTTA
TGCGACCACGGAAAGCCCCCGCGATTCATTTCCGACAGACGAGCACTCAC
TTGTTTTTGCCCTTCCTTTCAGTGCATGGCGTGCTCCAACAATGTCGTGC
GGTGCGCCCTGACCCCCAAGTTCCGCGACGTGGATCTGTTGGTGGACATG
CTGTCCTACAACATGGCCGCGCCGGCGGTGCTGCACCCGAACATCGTGGA
CGAAAACCGCAAGCGCTTTACGCCTCCCGTCGCTGATTTCGAGATCGAAG
ACATCCACGTGAGTCTTCACGGCCTCGCTTTGCCCGCGCAGTGCTCTGTG
GGATTGTCTAGATGTTTTCCTGAGTGGTGCTTGGTGCATTTGGAAGGGTT
ATGGTTTGTTCGTGAACCACGATACGGCCATAACAAGGTGTCTCGCGCGG
TGAAGCACAGTAGCAGCTTCACTCATATCTCCCTCTCACGGTTTTGGTAT
ACATTAAACATAAGTCAACTGTGAGCTCGACCAAAACTTGACTGAACATG
CGCCATTGCACTGGGCGTAACCATCTCCATAGCAATATCGGAATAATTTC
AGTCAACTCCTTTTGCAGCAGATTTAGCTCTTACAGCATATCACAAGCGT
CTTTCCCATAGCACAGGAAATCTCAGTCTCTCCACCACATTGTATTGCTT
GTGCGAGCTACTACCTATACATCAGCTGATTCCTCCTCCACCCCCCTCTA
CCAAGCATGAAACGAAATCCTGACGCGATATATTTCACGTGGTACAGTAT
TTAACCGAGCAGAAAATTCCATCATGCTGAAACGCGCCCGTAACGAGCGA
GCCCCGTTCGCACCCCATCAAAAACCCTGCAAGGTACCTGCGAATGATGT
TTATGGCTTGGAGCCGATGCCAGTGCCTGCAGTGCTGGTGACACTCAAGG
GCACTCAGGGAGGTTTGTTGCTCGACGAAGACACAGGCAAGGAGGTA
back to top

Coding sequence (CDS) from alignment at M-pyrifera_M_contig8162:1788..7934+

>mRNA_M-pyrifera_M_contig8162.19105.1 ID=mRNA_M-pyrifera_M_contig8162.19105.1|Name=mRNA_M-pyrifera_M_contig8162.19105.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=2580bp|location=Sequence derived from alignment at M-pyrifera_M_contig8162:1788..7934+ (Macrocystis pyrifera P11B4 male)
ATGGCGCGGCGCATGTCAAGCTTCGTTCAGATGGCGCGGCGCATGTCAAG
CTTCGTTCAGAAATATGCCTGGGGAAAGCCGGGCGACCAGAGCGTGGTGG
CGAGCTTGAAGGCTGCCGGTGACAAATCCTACAAAGTAGACGCCGACGAG
CCGTACGCAGAGATGTGGATCGGAACGCATCCCAGCGGCCCCTCCAACCT
GCTCACCAACAGCGGAAACGTCGGGCCTCTTCTCAAGAAATATGCCTGGG
GAAAGCCGGGCGACCAGAGCGTGGTGGCGAGCTTGAAGGCTGCCGGTGAC
AAATCCTACAAAGTAGACGCCGACGAGCCGTACGCAGAGATGTGGATCGG
AACGCATCCCAGCGGCCCCTCCAACCTGCTCACCAACAGCGGAAACGTCG
GGCCTCTTCTCAAGGATCACCTCACTTCCGAACCCGACGCTCTGGGTGAC
ATAGCCCACAAAGGAGACCTTCCGTTTCTCTTCAAGGTTATTTCCATCAA
CAAAGCTCTGAGCATCCAGGATCACCTCACTTCCGAACCCGACGCTCTGG
GTGACATAGCCCACAAAGGAGACCTTCCGTTTCTCTTCAAGGTTATTTCC
ATCAACAAAGCTCTGAGCATCCAGGCGCACCCTAACAAGAAGCTCGCTGA
GAGGCTCCATGCCAAGAGACCCGACGTCTACGCGGATGACAACCACAAGC
CGGAGATGGCGGTGACGCTGTCCGACTTCGAGGCCCTCTGCGGCTTCCGT
CCCTTCATGGAAATAATCTGGAACCTGCACTTCTTTCCGGAGCTGCTCGC
CCTCGTGTCTCTCGAAGCCATCCACCAGGCGCACCCTAACAAGAAGCTCG
CTGAGAGGCTCCATGCCAAGAGACCCGACGTCTACGCGGATGACAACCAC
AAGCCGGAGATGGCGGTGACGCTGTCCGACTTCGAGGCCCTCTGCGGCTT
CCGTCCCTTCATGGAAATAATCTGGAACCTGCACTTCTTTCCGGAGCTGC
TCGCCCTCGTGTCTCTCGAAGCCATCCACCAGATGATGACGGCCGGCGAC
GATGTGGAGAGGCAAAAGTTTGCTCTTCGAGAACTCTTCCGCTCCTACAA
CAATGCCCCCGACGAAAAAGTGAGAACTCAGGTGGACCTTTTGGTCGCCA
GGCTGGACTGGGCATCCGGCATCCCTCGAGTCGACGAGGTCGAATTCAAC
GAGGGAGAAGTCAAGATGAGCCACGGGGAGATGATGACGGCCGGCGACGA
TGTGGAGAGGCAAAAGTTTGCTCTTCGAGAACTCTTCCGCTCCTACAACA
ATGCCCCCGACGAAAAAGTGAGAACTCAGGTGGACCTTTTGGTCGCCAGG
CTGGACTGGGCATCCGGCATCCCTCGAGTCGACGAGGTCGAATTCAACGA
GGGAGAAGTCAAGATGAGCCACGGGGAGGGGAGAGACGAGGAGGAGCAGA
AGGCCCAGTTTACGGAAACAATGTTCGACAGCCGGTTTCGGCAGGGGTCC
CTTGCGGCAGAGGCTTTGGACAAAAGGGGAGAGACGAGGAGGAGCAGAAG
GCCCAGTTTACGGAAACAATGTTCGACAGCCGGTTTCGGCAGGGGTCCCT
TGCGGCAGAGGCTTTGGACAAAAGGATGAAAAAGGAAAACCCCGATGTGA
TCCGCGTGATGCTACGGTTGTCTACCGAATACCCGGGAGATCTCGGCATT
CTGATGCCCTTGGTGCTCAACCTGCTGATGCTCAAGACTGGCAAGGCGTT
CTTTATGACGGTCGACGAGCCCCACGCCTACCTTCGCGGGGATATTCTCG
AGGATGAAAAAGGAAAACCCCGATGTGATCCGCGTGATGCTACGGTTGTC
TACCGAATACCCGGGAGATCTCGGCATTCTGATGCCCTTGGTGCTCAACC
TGCTGATGCTCAAGACTGGCAAGGCGTTCTTTATGACGGTCGACGAGCCC
CACGCCTACCTTCGCGGGGATATTCTCGAGTGCATGGCGTGCTCCAACAA
TGTCGTGCGGTGCGCCCTGACCCCCAAGTTCCGCGACGTGGATCTGTTGG
TGGACATGCTGTCCTACAACATGGCCGCGCCGGCGGTGCTGCACCCGAAC
ATCGTGGACGAAAACCGCAAGCGCTTTACGCCTCCCGTCGCTGATTTCGA
GATCGAAGACATCCACTGCATGGCGTGCTCCAACAATGTCGTGCGGTGCG
CCCTGACCCCCAAGTTCCGCGACGTGGATCTGTTGGTGGACATGCTGTCC
TACAACATGGCCGCGCCGGCGGTGCTGCACCCGAACATCGTGGACGAAAA
CCGCAAGCGCTTTACGCCTCCCGTCGCTGATTTCGAGATCGAAGACATCC
ACGTACCTGCGAATGATGTTTATGGCTTGGAGCCGATGCCAGTGCCTGCA
GTGCTGGTGACACTCAAGGGCACTCAGGGAGGTTTGTTGCTCGACGAAGA
CACAGGCAAGGAGGTAGTACCTGCGAATGATGTTTATGGCTTGGAGCCGA
TGCCAGTGCCTGCAGTGCTGGTGACACTCAAGGGCACTCAGGGAGGTTTG
TTGCTCGACGAAGACACAGGCAAGGAGGTA
back to top