mRNA_M-pyrifera_M_contig816.19099.1 (mRNA) Macrocystis pyrifera P11B4 male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_M-pyrifera_M_contig816.19099.1
Unique NamemRNA_M-pyrifera_M_contig816.19099.1
TypemRNA
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Homology
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BLAST of mRNA_M-pyrifera_M_contig816.19099.1 vs. uniprot
Match: D7FLA7_ECTSI (Protein kinase domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FLA7_ECTSI)

HSP 1 Score: 170 bits (430), Expect = 3.390e-47
Identity = 77/87 (88.51%), Postives = 82/87 (94.25%), Query Frame = 1 
Query:    4 QGIAKLADFGCSKQFQGARTPSFDESLQTMRGSVPWMAPEMVKQTGHGRSADVWSLGATMIEMYTARYPWPAFSNNIAAMYHVATCT 264
            QGIAKLADFGCSKQFQG  TPSFD+SL+TMRGSVPWMAPEM KQTGHGRSADVWS+GATMIEMYTARYPWP FSNN+AA+YHVAT T
Sbjct: 1300 QGIAKLADFGCSKQFQGVTTPSFDDSLRTMRGSVPWMAPEMAKQTGHGRSADVWSVGATMIEMYTARYPWPPFSNNMAAIYHVATAT 1386
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BLAST of mRNA_M-pyrifera_M_contig816.19099.1 vs. uniprot
Match: A0A6H5JFJ5_9PHAE (Protein kinase domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JFJ5_9PHAE)

HSP 1 Score: 170 bits (430), Expect = 3.390e-47
Identity = 77/87 (88.51%), Postives = 82/87 (94.25%), Query Frame = 1 
Query:    4 QGIAKLADFGCSKQFQGARTPSFDESLQTMRGSVPWMAPEMVKQTGHGRSADVWSLGATMIEMYTARYPWPAFSNNIAAMYHVATCT 264
            QGIAKLADFGCSKQFQG  TPSFD+SL+TMRGSVPWMAPEM KQTGHGRSADVWS+GATMIEMYTARYPWP FSNN+AA+YHVAT T
Sbjct: 1300 QGIAKLADFGCSKQFQGVTTPSFDDSLRTMRGSVPWMAPEMAKQTGHGRSADVWSVGATMIEMYTARYPWPPFSNNMAAIYHVATAT 1386
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BLAST of mRNA_M-pyrifera_M_contig816.19099.1 vs. uniprot
Match: A0A835ZGH4_9STRA (Kinase-like domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZGH4_9STRA)

HSP 1 Score: 142 bits (357), Expect = 2.490e-40
Identity = 66/85 (77.65%), Postives = 73/85 (85.88%), Query Frame = 1 
Query:    4 QGIAKLADFGCSKQFQGARTPSFDESLQTMRGSVPWMAPEMVKQTGHGRSADVWSLGATMIEMYTARYPWPAFSNNIAAMYHVAT 258
            QGIAKLADFGCSKQ QG RT SF+ES   +RGSV WMAPE++KQT HGRSADVWS GATMIEM TA  PWPAF+NN+AAM+HVAT
Sbjct:  132 QGIAKLADFGCSKQLQGMRTQSFEESAHGIRGSVMWMAPEVIKQTRHGRSADVWSAGATMIEMGTAHRPWPAFTNNLAAMFHVAT 216
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BLAST of mRNA_M-pyrifera_M_contig816.19099.1 vs. uniprot
Match: F0YGX3_AURAN (Protein kinase domain-containing protein n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0YGX3_AURAN)

HSP 1 Score: 137 bits (346), Expect = 1.830e-38
Identity = 58/86 (67.44%), Postives = 75/86 (87.21%), Query Frame = 1 
Query:    7 GIAKLADFGCSKQFQGARTPSFDESLQTMRGSVPWMAPEMVKQTGHGRSADVWSLGATMIEMYTARYPWPAFSNNIAAMYHVATCT 264
            G+AKLADFGCSKQ QG RT + ++SLQ ++GSVPWMAPE++KQ+GHGR ADVWS+GAT+IEM TA++PWP FSNN+ A++ +AT T
Sbjct:  140 GVAKLADFGCSKQLQGMRTGTLEQSLQAIQGSVPWMAPEVIKQSGHGRGADVWSVGATVIEMATAKHPWPKFSNNLTALFQIATST 225
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BLAST of mRNA_M-pyrifera_M_contig816.19099.1 vs. uniprot
Match: A0A2D7SNP5_9BACT (Non-specific serine/threonine protein kinase n=1 Tax=Parcubacteria group bacterium TaxID=2026774 RepID=A0A2D7SNP5_9BACT)

HSP 1 Score: 141 bits (355), Expect = 4.420e-37
Identity = 59/84 (70.24%), Postives = 74/84 (88.10%), Query Frame = 1 
Query:    7 GIAKLADFGCSKQFQGARTPSFDESLQTMRGSVPWMAPEMVKQTGHGRSADVWSLGATMIEMYTARYPWPAFSNNIAAMYHVAT 258
            GIAKLADFGCSKQ  G RT   DESL+T+RGS+PWMAPE+++QTGHGR AD+WS+GAT++EM TAR+PWP+F NN +A++HVAT
Sbjct: 1289 GIAKLADFGCSKQMAGIRTNRLDESLKTLRGSIPWMAPEVIRQTGHGRKADIWSIGATVLEMATARHPWPSFENNFSALFHVAT 1372
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BLAST of mRNA_M-pyrifera_M_contig816.19099.1 vs. uniprot
Match: A0A425CTE0_9STRA (Protein kinase domain-containing protein (Fragment) n=1 Tax=Aphanomyces astaci TaxID=112090 RepID=A0A425CTE0_9STRA)

HSP 1 Score: 127 bits (320), Expect = 1.150e-34
Identity = 54/84 (64.29%), Postives = 71/84 (84.52%), Query Frame = 1 
Query:    4 QGIAKLADFGCSKQFQGARTPSFDESLQTMRGSVPWMAPEMVKQTGHGRSADVWSLGATMIEMYTARYPWPAFSNNIAAMYHVA 255
            QG+AKLADFGCSKQ    +T S +ESL+++RGSVPWMAPEM KQ+GH   AD+WS+GAT+IEM TA++PWPA +N+++ MYH+A
Sbjct:  130 QGVAKLADFGCSKQLSSVKTTSMEESLRSIRGSVPWMAPEMAKQSGHDFKADIWSVGATVIEMATAKHPWPANTNHLSVMYHLA 213
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BLAST of mRNA_M-pyrifera_M_contig816.19099.1 vs. uniprot
Match: K3WXL8_GLOUD (Protein kinase domain-containing protein n=1 Tax=Globisporangium ultimum (strain ATCC 200006 / CBS 805.95 / DAOM BR144) TaxID=431595 RepID=K3WXL8_GLOUD)

HSP 1 Score: 127 bits (320), Expect = 1.530e-34
Identity = 55/87 (63.22%), Postives = 74/87 (85.06%), Query Frame = 1 
Query:    4 QGIAKLADFGCSKQFQGARTPSFDESLQTMRGSVPWMAPEMVKQTGHGRSADVWSLGATMIEMYTARYPWPAFSNNIAAMYHVATCT 264
            Q ++KLADFGCSKQ    +T S +ESL+++RGSVPWM+PE+VKQTGHG  AD+WS+GAT++EM TAR+PWPA +N+++AMY +AT T
Sbjct:  153 QCVSKLADFGCSKQLPQIQTTSLEESLRSIRGSVPWMSPEVVKQTGHGFKADIWSIGATVVEMATARHPWPAATNSLSAMYTIATTT 239
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BLAST of mRNA_M-pyrifera_M_contig816.19099.1 vs. uniprot
Match: H3G7R8_PHYRM (Protein kinase domain-containing protein n=1 Tax=Phytophthora ramorum TaxID=164328 RepID=H3G7R8_PHYRM)

HSP 1 Score: 124 bits (312), Expect = 1.430e-33
Identity = 54/87 (62.07%), Postives = 69/87 (79.31%), Query Frame = 1 
Query:    4 QGIAKLADFGCSKQFQGARTPSFDESLQTMRGSVPWMAPEMVKQTGHGRSADVWSLGATMIEMYTARYPWPAFSNNIAAMYHVATCT 264
            QG++KLADFGCSKQ     T S +ESL+++RGS+PWMAPE+VKQTGHG  AD+WS+GAT+IEM TA++PWP   N +A MY +A  T
Sbjct:  139 QGVSKLADFGCSKQIPQMLTTSLEESLRSIRGSIPWMAPEIVKQTGHGYKADIWSIGATVIEMATAKHPWPHCHNGLAVMYTIAMAT 225
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BLAST of mRNA_M-pyrifera_M_contig816.19099.1 vs. uniprot
Match: A0A7S3XTM4_HETAK (Hypothetical protein (Fragment) n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3XTM4_HETAK)

HSP 1 Score: 123 bits (309), Expect = 4.340e-33
Identity = 55/84 (65.48%), Postives = 68/84 (80.95%), Query Frame = 1 
Query:    7 GIAKLADFGCSKQFQGARTPSFDESLQTMRGSVPWMAPEMVKQTGHGRSADVWSLGATMIEMYTARYPWPAFSNNIAAMYHVAT 258
            G+AKLADFGCSKQ    RT SF +SL  ++GSVPWMAPE++KQ GHGRSADVWS G T++EM TA +PWP  +NN+AAM+ VA+
Sbjct:   64 GVAKLADFGCSKQLSAMRTASFQDSL-AIKGSVPWMAPEVIKQEGHGRSADVWSAGVTLVEMATAEHPWPQCTNNLAAMFFVAS 146
[Close]
BLAST of mRNA_M-pyrifera_M_contig816.19099.1 vs. uniprot
Match: A0A7S2CCW9_9STRA (Hypothetical protein n=1 Tax=Florenciella parvula TaxID=236787 RepID=A0A7S2CCW9_9STRA)

HSP 1 Score: 124 bits (310), Expect = 9.710e-33
Identity = 54/88 (61.36%), Postives = 74/88 (84.09%), Query Frame = 1 
Query:    4 QGIAKLADFGCSKQFQGARTPSFDESL-QTMRGSVPWMAPEMVKQTGHGRSADVWSLGATMIEMYTARYPWPAFSNNIAAMYHVATCT 264
            QG+AKLADFGCSKQ QG  + + ++S+ +T+ GSVPWMAPE++KQ+G+GR++DVWS+GAT+IEM TA +PWPA SNN AA++ +A  T
Sbjct:  169 QGVAKLADFGCSKQLQGLCSNTLEDSMNKTVSGSVPWMAPEVIKQSGYGRTSDVWSVGATVIEMATAHHPWPALSNNFAAIFEIANAT 256
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig816.19099.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FLA7_ECTSI3.390e-4788.51Protein kinase domain-containing protein n=1 Tax=E... [more]
A0A6H5JFJ5_9PHAE3.390e-4788.51Protein kinase domain-containing protein n=1 Tax=E... [more]
A0A835ZGH4_9STRA2.490e-4077.65Kinase-like domain-containing protein n=1 Tax=Trib... [more]
F0YGX3_AURAN1.830e-3867.44Protein kinase domain-containing protein n=1 Tax=A... [more]
A0A2D7SNP5_9BACT4.420e-3770.24Non-specific serine/threonine protein kinase n=1 T... [more]
A0A425CTE0_9STRA1.150e-3464.29Protein kinase domain-containing protein (Fragment... [more]
K3WXL8_GLOUD1.530e-3463.22Protein kinase domain-containing protein n=1 Tax=G... [more]
H3G7R8_PHYRM1.430e-3362.07Protein kinase domain-containing protein n=1 Tax=P... [more]
A0A7S3XTM4_HETAK4.340e-3365.48Hypothetical protein (Fragment) n=1 Tax=Heterosigm... [more]
A0A7S2CCW9_9STRA9.710e-3361.36Hypothetical protein n=1 Tax=Florenciella parvula ... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig816contigM-pyrifera_M_contig816:23591..25305 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-19
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score169.9
Seed ortholog evalue5.5e-40
Seed eggNOG ortholog2880.D7FLA7
Hectar predicted targeting categoryother localisation
EggNOG free text desc.MAP kinase kinase kinase activity
EggNOG OGsKOG0198@1,KOG0198@2759
COG Functional cat.S
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
Exons2
Model size266
Cds size264
Stop0
Start0
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622816723.2424152-CDS-M-pyrifera_M_contig816:23590..236561622816723.2424152-CDS-M-pyrifera_M_contig816:23590..23656Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig816 23591..23656 +
1692278141.0383606-CDS-M-pyrifera_M_contig816:23590..236561692278141.0383606-CDS-M-pyrifera_M_contig816:23590..23656Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig816 23591..23656 +
1622816723.2573347-CDS-M-pyrifera_M_contig816:25107..253051622816723.2573347-CDS-M-pyrifera_M_contig816:25107..25305Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig816 25108..25305 +
1692278141.0567243-CDS-M-pyrifera_M_contig816:25107..253051692278141.0567243-CDS-M-pyrifera_M_contig816:25107..25305Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig816 25108..25305 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig816.19099.1prot_M-pyrifera_M_contig816.19099.1Macrocystis pyrifera P11B4 malepolypeptideM-pyrifera_M_contig816 23591..25305 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_M-pyrifera_M_contig816.19099.1

>prot_M-pyrifera_M_contig816.19099.1 ID=prot_M-pyrifera_M_contig816.19099.1|Name=mRNA_M-pyrifera_M_contig816.19099.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=88bp
PQGIAKLADFGCSKQFQGARTPSFDESLQTMRGSVPWMAPEMVKQTGHGR
SADVWSLGATMIEMYTARYPWPAFSNNIAAMYHVATCT
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mRNA from alignment at M-pyrifera_M_contig816:23591..25305+

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_M-pyrifera_M_contig816.19099.1 ID=mRNA_M-pyrifera_M_contig816.19099.1|Name=mRNA_M-pyrifera_M_contig816.19099.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=1715bp|location=Sequence derived from alignment at M-pyrifera_M_contig816:23591..25305+ (Macrocystis pyrifera P11B4 male)
CCGCAGGGCATCGCCAAGCTTGCAGACTTCGGGTGCTCGAAGCAGTTTCA
GGGAGCAAGGACGCCGGTGAGGGTCGTCATACCTTGCTGTAGCGATTGGT
ACAACAGTACTGTGCGAGGTTTTCTCACCGACTTGCCATCTAGAGTGGCG
TCTCAACGACTCGCCGCCGCCGCCGCCGCCACCAGGAGACTTACCTTGCC
AAACGAGATGCCTGCATGTGGTGGTGGTGCTTCAGAAACACTCAACCCAC
CCATGCCGTTGTGCTCGTTAGGCATGTTGTGCCGATTCTGCGGCGAGGTT
ATGGTGCGCAGCACGTAAAACGTCCATGCTATGACTTGCCGTCGTCGATC
AGACTGGACTGTTTTCGGTTCGTGACTCACGTTTTCACTCCTGTCGGATT
CGACACTTATGCTGTACACGCGGTGTTCATTGGAGGCGTGCTATGCTAGG
GGTAGCGTTGATTTTGACCAAGCAAAGGTTGTGACTGACCGGGCTCCTGA
ACCCAATATCGTTGGAGTACCAATATCAATGCTTGTGTTTTACAACATTC
TTCGTGATGTACCGACAGTACTACTGCAGGCTCCGAGATTGTTCATCGGG
GTGCGCTTTTATCTTTTGTCGAAATCACTTTTTTTAGTGGCATCCGATTA
GAATAGAGCTCTTCAAGTGAGGAGTCTCACACAAATTAGGCGTTGCCTGG
TACAGACTATGCCCCTACAGTAGCACGCATTACCTACAATTACTGCAGTC
TTCTCTTACCCCTACAGCTCGACGCCTACGGCGGGAAGCCTACTGCGGGG
TACGCTCTCGGCGTTGTCTGTGGCTGCCGAGAGGCTCGCGTTTTTTCGGA
ACAGTGCCGCCCACCCTTCGGAGCTCTTCGAATAAAAAGAACTTCCCACA
AAAACGCGAAGCGACCCACCCTTCATCCATGCGCTAGGCGTTAATGGTGC
ACTGCGGAGATGCTTCGTAGCGATTGTCGTTGATATCGGCAATTGCCTTG
CAGGAACGGAATTACTCCGTGGCACCGACAGTGGTATTCGTGGGCTCGGA
GATGCCCAAAGCACCTCGTTCTGCATTGAGCAGCACTGGCCGTCGTCCCC
GCGTTTTTGTTCCACTCGCACGCATGTGTTGCTCTTCACACGGCATGGTG
TCGTCTGGAAACACCCTGGCATGATCCTCGCGGCTTTGCAGTTGGTATTT
CATGCATGCCCCGTGTCATGCTATATAGTCAACACCTTCTCAACAATGTC
TGCCGGGTTATGCGCGATTGGCTCGCACCTCGAGTCCCCTGCTCGTTGGA
ATGCTGTTGCCGCGTTCAGAAGCTTTCACGTATTGACGTTTTTGTGAAAT
GTTGACGAGTTTTTTTAAGCACATGTCGTTTGGCTTTTGGGTGAATGCCT
CGTTCTGACGCACATCTCGGTTTGGTGTTTCGGCGAATTGTTGATGTTGT
CGCCGCGTTTTGCGAAGCACACGTCATTTTGATGCCTTTGTTTGTGAAAT
GCTTGTTGTTTGCTCAGAGCTTCGACGAAAGCCTGCAGACAATGAGAGGA
TCCGTGCCATGGATGGCACCCGAGATGGTCAAGCAAACAGGCCACGGCCG
CAGCGCCGACGTGTGGAGCTTAGGAGCCACGATGATCGAGATGTATACAG
CTCGCTATCCTTGGCCTGCGTTTTCTAATAACATTGCCGCCATGTACCAC
GTTGCGACATGCACA
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Coding sequence (CDS) from alignment at M-pyrifera_M_contig816:23591..25305+

>mRNA_M-pyrifera_M_contig816.19099.1 ID=mRNA_M-pyrifera_M_contig816.19099.1|Name=mRNA_M-pyrifera_M_contig816.19099.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=528bp|location=Sequence derived from alignment at M-pyrifera_M_contig816:23591..25305+ (Macrocystis pyrifera P11B4 male)
CCGCAGGGCATCGCCAAGCTTGCAGACTTCGGGTGCTCGAAGCAGTTTCA
GGGAGCAAGGACGCCGCCGCAGGGCATCGCCAAGCTTGCAGACTTCGGGT
GCTCGAAGCAGTTTCAGGGAGCAAGGACGCCGAGCTTCGACGAAAGCCTG
CAGACAATGAGAGGATCCGTGCCATGGATGGCACCCGAGATGGTCAAGCA
AACAGGCCACGGCCGCAGCGCCGACGTGTGGAGCTTAGGAGCCACGATGA
TCGAGATGTATACAGCTCGCTATCCTTGGCCTGCGTTTTCTAATAACATT
GCCGCCATGTACCACGTTGCGACATGCACAAGCTTCGACGAAAGCCTGCA
GACAATGAGAGGATCCGTGCCATGGATGGCACCCGAGATGGTCAAGCAAA
CAGGCCACGGCCGCAGCGCCGACGTGTGGAGCTTAGGAGCCACGATGATC
GAGATGTATACAGCTCGCTATCCTTGGCCTGCGTTTTCTAATAACATTGC
CGCCATGTACCACGTTGCGACATGCACA
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