mRNA_M-pyrifera_M_contig81560.19087.1 (mRNA) Macrocystis pyrifera P11B4 male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_M-pyrifera_M_contig81560.19087.1
Unique NamemRNA_M-pyrifera_M_contig81560.19087.1
TypemRNA
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Homology
BLAST of mRNA_M-pyrifera_M_contig81560.19087.1 vs. uniprot
Match: A0A6I6ABK9_9PLAN (DUF1549 domain-containing protein n=15 Tax=Gimesia TaxID=1649453 RepID=A0A6I6ABK9_9PLAN)

HSP 1 Score: 497 bits (1280), Expect = 7.220e-168
Identity = 297/309 (96.12%), Postives = 301/309 (97.41%), Query Frame = 1
Query:    1 RDQWMDDVVKHTSQTFLGITVGCAKCHDHMYDPIKQTEYYQMRAIFEPYHVRTDRVEGVLDVSKNGIPRAYDRSLTSKTWFLEAGDERRPVKDKSIPPGVPEFLGGKYEVEPVSLPLVASQPARREFVKQDLLDQAKETMEQXXXXXXXXXXXXXLAVLEAQFAIEAMEVAGDKKSDAWKTAAQNLVKLQREAAIEAAQWELTSAIKQEEQATTALKKAEKGKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDAAKEKLTTKYSPRKQSKYPESSTGRRLAFARWLTNRQNPLTARVAMNHIWLRHFG 927
            RDQWMDDVVKHTSQ FLGITVGCAKCHDHMYDPIKQTEYYQMRAIFEPYHVRTDRV GVLDVSKNGIPRAYDRSLTSKTWFLEAGDERRPVKDKSIPPGVPEFLGGKYEVEPVSLPLVASQPARREFVKQDLLDQAK TMEQ   XXXXXXXXX LAVLEAQFAIEAMEVAGDKKSDAWKTAAQNLVKLQREAA+EAAQWELTSAIKQ+EQAT ALKKAEKGKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDAAKEKLTTKY+PRKQSKYPESSTGRRLAFARWLT+RQNPLTARVAMNHIWLRHFG
Sbjct:  328 RDQWMDDVVKHTSQAFLGITVGCAKCHDHMYDPIKQTEYYQMRAIFEPYHVRTDRVAGVLDVSKNGIPRAYDRSLTSKTWFLEAGDERRPVKDKSIPPGVPEFLGGKYEVEPVSLPLVASQPARREFVKQDLLDQAKGTMEQAKAXXXXXXXXXALAVLEAQFAIEAMEVAGDKKSDAWKTAAQNLVKLQREAAVEAAQWELTSAIKQQEQATAALKKAEKGKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDAAKEKLTTKYAPRKQSKYPESSTGRRLAFARWLTDRQNPLTARVAMNHIWLRHFG 636          
BLAST of mRNA_M-pyrifera_M_contig81560.19087.1 vs. uniprot
Match: A0A517RDI4_9PLAN (Uncharacterized protein n=3 Tax=Gimesia TaxID=1649453 RepID=A0A517RDI4_9PLAN)

HSP 1 Score: 422 bits (1086), Expect = 8.600e-139
Identity = 239/309 (77.35%), Postives = 265/309 (85.76%), Query Frame = 1
Query:    1 RDQWMDDVVKHTSQTFLGITVGCAKCHDHMYDPIKQTEYYQMRAIFEPYHVRTDRVEGVLDVSKNGIPRAYDRSLTSKTWFLEAGDERRPVKDKSIPPGVPEFLGGKYEVEPVSLPLVASQPARREFVKQDLLDQAKETMEQXXXXXXXXXXXXXLAVLEAQFAIEAMEVAGDKKSDAWKTAAQNLVKLQREAAIEAAQWELTSAIKQEEQATTALKKAEKGKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDAAKEKLTTKYSPRKQSKYPESSTGRRLAFARWLTNRQNPLTARVAMNHIWLRHFG 927
            RDQWMDDVVKHTSQ FLGITVGCAKCHDHMYDPIKQ EYYQMRA+FE YHVRTDRVEGVLD S+NGIPRAYD+S+T+KTWF E GDERRPVKDKSIPPGVP+FLGG YEV+PVSLPLVASQPARR+FVKQD L Q +  MEQ             LAVLEAQFAIE ME AGDKKSDAWKTAA+ LV+LQREAA++ AQW+L SA++++EQA   L KAEKGK     XXXXXXXXXXXXXXXXXXXXXXXXX+AA+ K+TTKY+PRKQ  YP+ S+GRRLAFARWLT++ NPLTARVAMNHIWLRHFG
Sbjct:  328 RDQWMDDVVKHTSQAFLGITVGCAKCHDHMYDPIKQDEYYQMRAVFETYHVRTDRVEGVLDTSENGIPRAYDKSVTAKTWFFEKGDERRPVKDKSIPPGVPKFLGGAYEVQPVSLPLVASQPARRDFVKQDFLAQMRGAMEQAKQPEQRLAAESALAVLEAQFAIEEMEAAGDKKSDAWKTAAKELVQLQREAALKDAQWKLMSAVEKQEQAKQTLAKAEKGKKKSAIXXXXXXXXXXXXXXXXXXXXXXXXXEAAQAKVTTKYTPRKQPTYPKQSSGRRLAFARWLTDKNNPLTARVAMNHIWLRHFG 636          
BLAST of mRNA_M-pyrifera_M_contig81560.19087.1 vs. uniprot
Match: A0A2E2BYX2_9PLAN (Uncharacterized protein n=8 Tax=Planctomycetaceae TaxID=126 RepID=A0A2E2BYX2_9PLAN)

HSP 1 Score: 386 bits (992), Expect = 1.850e-124
Identity = 224/309 (72.49%), Postives = 251/309 (81.23%), Query Frame = 1
Query:    1 RDQWMDDVVKHTSQTFLGITVGCAKCHDHMYDPIKQTEYYQMRAIFEPYHVRTDRVEGVLDVSKNGIPRAYDRSLTSKTWFLEAGDERRPVKDKSIPPGVPEFLGGKYEVEPVSLPLVASQPARREFVKQDLLDQAKETMEQXXXXXXXXXXXXXLAVLEAQFAIEAMEVAGDKKSDAWKTAAQNLVKLQREAAIEAAQWELTSAIKQEEQATTALKKAEKGKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDAAKEKLTTKYSPRKQSKYPESSTGRRLAFARWLTNRQNPLTARVAMNHIWLRHFG 927
            RDQWMDDVVKHTSQ FLGITVGCAKCHDHMYD I+Q EYY+MRAIFE YHVRTDRVEGVLD + NGIPRAYDRSLT+KTW  E GDERRPVK++ IPPGVP FLGG+Y+V PVSLP+VASQPARRE VK+DLL  A++ MEQ             LAVLEAQFAIE +E +GDKKS  WK AA NLVKLQR++A+E A+W LT+A ++++ A  AL+KAE  K      XXXXXXXXXXXXXXXXXXXXXXXX     KLTTKY+PRKQ  YP+SS+GRRLAFARWLTN  NPLTARVAMNHIWLRHFG
Sbjct:  360 RDQWMDDVVKHTSQAFLGITVGCAKCHDHMYDEIEQREYYEMRAIFETYHVRTDRVEGVLDTATNGIPRAYDRSLTAKTWLFEKGDERRPVKEEVIPPGVPTFLGGEYKVAPVSLPMVASQPARRESVKEDLLTHARKMMEQAKAKEQRLAAESELAVLEAQFAIEDLEASGDKKSAEWKDAALNLVKLQRQSALENARWNLTAAEQEQQAAQQALEKAEAKKNKSVITXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKLTTKYTPRKQPVYPQSSSGRRLAFARWLTNANNPLTARVAMNHIWLRHFG 668          
BLAST of mRNA_M-pyrifera_M_contig81560.19087.1 vs. uniprot
Match: A0A2D5H433_9PLAN (Uncharacterized protein n=2 Tax=Gimesia TaxID=1649453 RepID=A0A2D5H433_9PLAN)

HSP 1 Score: 374 bits (960), Expect = 1.010e-119
Identity = 223/309 (72.17%), Postives = 251/309 (81.23%), Query Frame = 1
Query:    1 RDQWMDDVVKHTSQTFLGITVGCAKCHDHMYDPIKQTEYYQMRAIFEPYHVRTDRVEGVLDVSKNGIPRAYDRSLTSKTWFLEAGDERRPVKDKSIPPGVPEFLGGKYEVEPVSLPLVASQPARREFVKQDLLDQAKETMEQXXXXXXXXXXXXXLAVLEAQFAIEAMEVAGDKKSDAWKTAAQNLVKLQREAAIEAAQWELTSAIKQEEQATTALKKAEKGKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDAAKEKLTTKYSPRKQSKYPESSTGRRLAFARWLTNRQNPLTARVAMNHIWLRHFG 927
            RDQWMDDVVKHTSQ FLGITVGCAKCHDHMYD I+Q EYY+MRAIFE YHVRTDR EGVLD +KNGIPRAYD+SLT+KTW  E GDERRPVK+++IPPGVP FLGG+++V PVSLP+VASQPARRE VK+DLL  A++ MEQ             LAVLEAQFAIE M   GDKKSD WK AA NLVKLQR++A+E A+W L SA ++++ A  AL+ AE  KXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX         KY+PRKQ  YP SS+GRRLAFARWLT+ +NPLTARVAMNHIWLRHFG
Sbjct:  359 RDQWMDDVVKHTSQAFLGITVGCAKCHDHMYDEIEQREYYEMRAIFETYHVRTDRAEGVLDTAKNGIPRAYDKSLTAKTWLFEKGDERRPVKEEAIPPGVPTFLGGEFKVSPVSLPMVASQPARRETVKRDLLSHARKMMEQAKAKEQRVAAESELAVLEAQFAIEEMVAKGDKKSDTWKEAALNLVKLQRQSAVENARWNLISATQEQQAAQQALENAEAKKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKYTPRKQPVYPRSSSGRRLAFARWLTDGKNPLTARVAMNHIWLRHFG 667          
BLAST of mRNA_M-pyrifera_M_contig81560.19087.1 vs. uniprot
Match: A0A350KAS1_9PLAN (PSD1 domain-containing protein n=1 Tax=Planctomycetaceae bacterium TaxID=2026779 RepID=A0A350KAS1_9PLAN)

HSP 1 Score: 293 bits (749), Expect = 1.450e-92
Identity = 187/268 (69.78%), Postives = 213/268 (79.48%), Query Frame = 1
Query:  124 MRAIFEPYHVRTDRVEGVLDVSKNGIPRAYDRSLTSKTWFLEAGDERRPVKDKSIPPGVPEFLGGKYEVEPVSLPLVASQPARREFVKQDLLDQAKETMEQXXXXXXXXXXXXXLAVLEAQFAIEAMEVAGDKKSDAWKTAAQNLVKLQREAAIEAAQWELTSAIKQEEQATTALKKAEKGKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDAAKEKLTTKYSPRKQSKYPESSTGRRLAFARWLTNRQNPLTARVAMNHIWLRHFG 927
            MRAIFE YHVRTDRVEGVLD +KNGIPRAYD+SLT+KTW  E GDERRPVK+++IPPGVP FLGG+++V PVSLP+VASQPARRE VK+DLL  A++ MEQ             LAVLEAQFAIE ME  GDKKSD WK AA NLVKLQR++ +E A+W L SA ++++ A  AL+ AE  KXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX          YSPRKQ  YP+SS+GRRL FARWLT+ +NPLTARVAMNHIWLRHFG
Sbjct:    1 MRAIFETYHVRTDRVEGVLDTAKNGIPRAYDKSLTAKTWLFEKGDERRPVKEEAIPPGVPTFLGGEFKVTPVSLPMVASQPARRETVKEDLLTHARKMMEQAKAKEQRLAAKSELAVLEAQFAIEEMEAKGDKKSDTWKEAALNLVKLQRQSVLENARWNLISATQEQQAAQQALENAEAQKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXYSPRKQPVYPKSSSGRRLTFARWLTDGKNPLTARVAMNHIWLRHFG 268          
BLAST of mRNA_M-pyrifera_M_contig81560.19087.1 vs. uniprot
Match: A0A2E7CX60_9PLAN (Uncharacterized protein n=1 Tax=Planctomycetaceae bacterium TaxID=2026779 RepID=A0A2E7CX60_9PLAN)

HSP 1 Score: 287 bits (734), Expect = 1.410e-86
Identity = 187/309 (60.52%), Postives = 220/309 (71.20%), Query Frame = 1
Query:    1 RDQWMDDVVKHTSQTFLGITVGCAKCHDHMYDPIKQTEYYQMRAIFEPYHVRTDRVEGVLDVSKNGIPRAYDRSLTSKTWFLEAGDERRPVKDKSIPPGVPEFLGGKYEVEPVSLPLVASQPARREFVKQDLLDQAKETMEQXXXXXXXXXXXXXLAVLEAQFAIEAMEVAGDKKSDAWKTAAQNLVKLQREAAIEAAQWELTSAIKQEEQATTALKKAEKGKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDAAKEKLTTKYSPRKQSKYPESSTGRRLAFARWLTNRQNPLTARVAMNHIWLRHFG 927
            RDQWMD+VVKH+SQ FLGITVGCAKCHDHMYDPI Q EYY MRAIFE Y VRTDRV GVLD  K GIPRAYD +L   TWFLEAGDERRPVKD  IP GVP  LGG +E + VSLP  A++P RR+FV+ DLL  A++++               +AVL+AQF IE +E  G K +D W + A+ L +LQR++A+  AQ ++ +A                  XXXXXXXXXXXXXXXXXXXXXXXXXXXXXX   + ++TTKY+PRKQS Y   S G RLAFARW+T  +NPL ARVA+NHIWLRHFG
Sbjct:  360 RDQWMDNVVKHSSQGFLGITVGCAKCHDHMYDPITQREYYSMRAIFERYSVRTDRVPGVLDTMKGGIPRAYDNTLVVNTWFLEAGDERRPVKDDPIPAGVPASLGGTFEPQQVSLPRFATKPDRRDFVRADLLAAAQKSVVAAKDDKTKQAAESKVAVLQAQFEIEDLEDNGGKDTDEWTSQAKALFELQRQSALFDAQAKMEAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEAEVTTKYAPRKQSTYLNKSNGSRLAFARWVTANENPLAARVAVNHIWLRHFG 668          
BLAST of mRNA_M-pyrifera_M_contig81560.19087.1 vs. uniprot
Match: A0A2E5EJ93_9BACT (Multidrug transporter n=1 Tax=Verrucomicrobiales bacterium TaxID=2026801 RepID=A0A2E5EJ93_9BACT)

HSP 1 Score: 283 bits (724), Expect = 1.400e-85
Identity = 176/309 (56.96%), Postives = 215/309 (69.58%), Query Frame = 1
Query:    1 RDQWMDDVVKHTSQTFLGITVGCAKCHDHMYDPIKQTEYYQMRAIFEPYHVRTDRVEGVLDVSKNGIPRAYDRSLTSKTWFLEAGDERRPVKDKSIPPGVPEFLGGKYEVEPVSLPLVASQPARREFVKQDLLDQAKETMEQXXXXXXXXXXXXXLAVLEAQFAIEAMEVAGDKKSDAWKTAAQNLVKLQREAAIEAAQWELTSAIKQEEQATTALKKAEKGKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDAAKEKLTTKYSPRKQSKYPESSTGRRLAFARWLTNRQNPLTARVAMNHIWLRHFG 927
            R QWMD+VV HTSQ F+G+TVGCAKCHDHMYDPI Q +YY MRA+FE Y VRTDR+ G LD+ K+GIPR YD+S+ SKT+  E GDERRP+KDK+IPP VP  LGG Y+++ V LP  A QP  R FV ++LL QA+  +               L  L+A+ A E +E    KKS  W  AA+N++KLQREA +  A+ ++ ++ K +   +TA  K     XXXXXXXXXXXXXXXXXXXXXXXX       A K KLT+KY  R    Y  SSTGRRLAFA+WLT+++NPLTARVAMNHIWLRHFG
Sbjct:  304 RQQWMDNVVTHTSQAFMGVTVGCAKCHDHMYDPIPQQDYYAMRAVFESYTVRTDRIPGQLDIMKDGIPRVYDQSMKSKTYMFERGDERRPIKDKAIPPNVPAALGGSYDLQTVKLPRFAYQPEHRPFVIKELLAQAEGNLAAAKTDLSRKSASMKLTALKAELAAERIEFKEGKKSKTWIKAAENVLKLQREANLAEARSDIETSQKSQ---STAEAKMXXXXXXXXXXXXXXXXXXXXXXXXXXXXKLETAEKAMKAKLTSKYKSRGAPTYLTSSTGRRLAFAKWLTDKENPLTARVAMNHIWLRHFG 609          
BLAST of mRNA_M-pyrifera_M_contig81560.19087.1 vs. uniprot
Match: A0A2E7K641_9PLAN (Colicin uptake protein (Fragment) n=1 Tax=Gimesia sp. TaxID=2024833 RepID=A0A2E7K641_9PLAN)

HSP 1 Score: 266 bits (679), Expect = 6.710e-83
Identity = 180/199 (90.45%), Postives = 184/199 (92.46%), Query Frame = 1
Query:  331 EPVSLPLVASQPARREFVKQDLLDQAKETMEQXXXXXXXXXXXXXLAVLEAQFAIEAMEVAGDKKSDAWKTAAQNLVKLQREAAIEAAQWELTSAIKQEEQATTALKKAEKGKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDAAKEKLTTKYSPRKQSKYPESSTGRRLAFARWLTNRQNPLTARVAMNHIWLRHFG 927
            EPVSLPLVASQPARREFVK+DLL+QAK TMEQ             LAVLEAQFAIEAMEVAGDKKSDAWKTAAQNLVKLQREAAIEAAQWELTSAIKQ+EQAT ALKKAEKGKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDAAKEKLTTKY+PRKQSKYPESSTGRRLAFARWLTNRQNPLTARVAMNHIWLRHFG
Sbjct:    1 EPVSLPLVASQPARREFVKEDLLNQAKGTMEQAKAPEQRAAAESALAVLEAQFAIEAMEVAGDKKSDAWKTAAQNLVKLQREAAIEAAQWELTSAIKQQEQATAALKKAEKGKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDAAKEKLTTKYTPRKQSKYPESSTGRRLAFARWLTNRQNPLTARVAMNHIWLRHFG 199          
BLAST of mRNA_M-pyrifera_M_contig81560.19087.1 vs. uniprot
Match: A0A848X2P7_9BACT (DUF1553 domain-containing protein n=1 Tax=Verrucomicrobiales bacterium TaxID=2026801 RepID=A0A848X2P7_9BACT)

HSP 1 Score: 253 bits (647), Expect = 7.610e-77
Identity = 170/320 (53.12%), Postives = 206/320 (64.38%), Query Frame = 1
Query:   16 DDVVKHTSQTFLGITVGCAKCHDHMYDPIKQTEYYQMRAIFEPYHVRTDRVEGVLDVSKNGIPRAYDRSLTSKTWFLEAGDERRPVKDKSIPPGVPEFLGGKYEVEPVSLPLVASQPARREFVKQDLLD-------QAKETMEQXXXXXXXXXXXXXLAVLE----------AQFAIEAMEVAGDKKSDAWKTAAQNLVKLQREAAIEAAQWELTSAIKQEEQATTALKKAEKGKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDAAKEKLTTKYSPRKQSKYPESSTGRRLAFARWLTNRQNPLTARVAMNHIWLRHF 924
            DDVV HTSQ FLG+T+GC+KCHDHMYDP  QT+Y+ MRAIFE Y VRTDRV G LD+ K G+PRAYD S+ +KT+  EAGDER PVKDK IPP +P  LGG++++E V LP+ A +P RREFV+ +LL         AKE +++                LE          A+F  EA+E AG K SD WK AA+     QR+AA+  A+W+L S                   XXXXXXXXXXXXXXXXXXXXXXXXXX       K K+TT++ PR Q  YP  S+GRR AFA WL + +NPLTARVAMNHIW+RHF
Sbjct:    1 DDVVTHTSQAFLGVTMGCSKCHDHMYDPFPQTDYFSMRAIFESYQVRTDRVPGELDIMKAGLPRAYDASIEAKTYLFEAGDERYPVKDKPIPPAIPAALGGEFQIESVKLPVKAYRPWRREFVRNELLAVESKLMADAKEELKKLAPDCDPKMRETVELKLESEKLKHAALLAEFESEALEDAGKKASDEWKAAAEKTFDAQRKAALANAKWKLVSGEVSRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAAAEKQMKAKVTTEFKPR-QGNYPNRSSGRRTAFATWLIDSKNPLTARVAMNHIWMRHF 319          
BLAST of mRNA_M-pyrifera_M_contig81560.19087.1 vs. uniprot
Match: A0A2E7KB73_9PLAN (PSCyt2 domain-containing protein (Fragment) n=1 Tax=Gimesia sp. TaxID=2024833 RepID=A0A2E7KB73_9PLAN)

HSP 1 Score: 246 bits (629), Expect = 2.270e-75
Identity = 115/119 (96.64%), Postives = 116/119 (97.48%), Query Frame = 1
Query:    1 RDQWMDDVVKHTSQTFLGITVGCAKCHDHMYDPIKQTEYYQMRAIFEPYHVRTDRVEGVLDVSKNGIPRAYDRSLTSKTWFLEAGDERRPVKDKSIPPGVPEFLGGKYEVEPVSLPLVA 357
            RDQWMDDVVKHTSQ FLGITVGCAKCHDHMYDPIKQTEYYQMRAIFEPYHVRTDRV GVLDVSKNGIPRAYDRSLTSKTWFLEAGDERRPVKDKSI PGVPEFLGGKY+VEPVSLPLVA
Sbjct:  325 RDQWMDDVVKHTSQAFLGITVGCAKCHDHMYDPIKQTEYYQMRAIFEPYHVRTDRVAGVLDVSKNGIPRAYDRSLTSKTWFLEAGDERRPVKDKSIQPGVPEFLGGKYQVEPVSLPLVA 443          
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig81560.19087.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6I6ABK9_9PLAN7.220e-16896.12DUF1549 domain-containing protein n=15 Tax=Gimesia... [more]
A0A517RDI4_9PLAN8.600e-13977.35Uncharacterized protein n=3 Tax=Gimesia TaxID=1649... [more]
A0A2E2BYX2_9PLAN1.850e-12472.49Uncharacterized protein n=8 Tax=Planctomycetaceae ... [more]
A0A2D5H433_9PLAN1.010e-11972.17Uncharacterized protein n=2 Tax=Gimesia TaxID=1649... [more]
A0A350KAS1_9PLAN1.450e-9269.78PSD1 domain-containing protein n=1 Tax=Planctomyce... [more]
A0A2E7CX60_9PLAN1.410e-8660.52Uncharacterized protein n=1 Tax=Planctomycetaceae ... [more]
A0A2E5EJ93_9BACT1.400e-8556.96Multidrug transporter n=1 Tax=Verrucomicrobiales b... [more]
A0A2E7K641_9PLAN6.710e-8390.45Colicin uptake protein (Fragment) n=1 Tax=Gimesia ... [more]
A0A848X2P7_9BACT7.610e-7753.13DUF1553 domain-containing protein n=1 Tax=Verrucom... [more]
A0A2E7KB73_9PLAN2.270e-7596.64PSCyt2 domain-containing protein (Fragment) n=1 Ta... [more]

Pages

back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig81560contigM-pyrifera_M_contig81560:1..927 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-19
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Properties
Property NameValue
Taxonomic scopeBacteria
Seed ortholog score367.5
Seed ortholog evalue6.2e-99
Seed eggNOG ortholog344747.PM8797T_27784
Hectar predicted targeting categoryother localisation
EggNOG free text desc.Protein of unknown function (DUF1549)
EggNOG OGs2J2QT@203682,COG2010@1,COG2010@2
COG Functional cat.C
Best tax levelPlanctomycetes
Best eggNOG OGNA|NA|NA
Exons1
Model size927
Cds size915
Stop0
Start1
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622816722.414217-CDS-M-pyrifera_M_contig81560:0..9151622816722.414217-CDS-M-pyrifera_M_contig81560:0..915Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig81560 1..915 -
1692278140.5013392-CDS-M-pyrifera_M_contig81560:0..9151692278140.5013392-CDS-M-pyrifera_M_contig81560:0..915Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig81560 1..915 -


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622816722.4258852-UTR-M-pyrifera_M_contig81560:915..9271622816722.4258852-UTR-M-pyrifera_M_contig81560:915..927Macrocystis pyrifera P11B4 maleUTRM-pyrifera_M_contig81560 916..927 -
1692278140.5149207-UTR-M-pyrifera_M_contig81560:915..9271692278140.5149207-UTR-M-pyrifera_M_contig81560:915..927Macrocystis pyrifera P11B4 maleUTRM-pyrifera_M_contig81560 916..927 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig81560.19087.1prot_M-pyrifera_M_contig81560.19087.1Macrocystis pyrifera P11B4 malepolypeptideM-pyrifera_M_contig81560 1..915 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_M-pyrifera_M_contig81560.19087.1

>prot_M-pyrifera_M_contig81560.19087.1 ID=prot_M-pyrifera_M_contig81560.19087.1|Name=mRNA_M-pyrifera_M_contig81560.19087.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=305bp
MDDVVKHTSQTFLGITVGCAKCHDHMYDPIKQTEYYQMRAIFEPYHVRTD
RVEGVLDVSKNGIPRAYDRSLTSKTWFLEAGDERRPVKDKSIPPGVPEFL
GGKYEVEPVSLPLVASQPARREFVKQDLLDQAKETMEQAKAPEQRAAAES
ALAVLEAQFAIEAMEVAGDKKSDAWKTAAQNLVKLQREAAIEAAQWELTS
AIKQEEQATTALKKAEKGKKKASISKAKQQLKKAEQAHKAAETQLKKAED
AAKEKLTTKYSPRKQSKYPESSTGRRLAFARWLTNRQNPLTARVAMNHIW
LRHFG
back to top

mRNA from alignment at M-pyrifera_M_contig81560:1..927-

Legend: UTRCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_M-pyrifera_M_contig81560.19087.1 ID=mRNA_M-pyrifera_M_contig81560.19087.1|Name=mRNA_M-pyrifera_M_contig81560.19087.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=927bp|location=Sequence derived from alignment at M-pyrifera_M_contig81560:1..927- (Macrocystis pyrifera P11B4 male)
CGTGACCAGTGGATGGATGACGTCGTGAAACATACTTCGCAGACATTCCT GGGAATCACCGTCGGTTGTGCGAAATGCCACGATCACATGTATGATCCGA TCAAACAGACTGAATACTATCAGATGCGGGCTATTTTCGAACCGTATCAC GTTCGTACAGACCGGGTGGAAGGCGTACTGGATGTCTCTAAGAATGGGAT TCCTCGTGCCTACGATCGTTCCTTGACGTCGAAGACCTGGTTTCTGGAAG CCGGCGACGAGCGACGTCCTGTGAAAGACAAAAGTATTCCGCCGGGAGTC CCTGAATTCCTGGGAGGGAAATATGAAGTCGAGCCGGTCTCACTGCCGTT GGTGGCCAGTCAGCCTGCCCGGCGCGAGTTCGTCAAGCAAGATCTGCTCG ATCAGGCCAAAGAGACTATGGAGCAGGCCAAAGCACCGGAACAGCGGGCT GCTGCGGAAAGTGCACTGGCAGTCCTGGAAGCCCAGTTTGCCATCGAAGC GATGGAAGTGGCTGGTGATAAAAAATCAGATGCCTGGAAAACGGCAGCAC AGAATCTGGTGAAGCTACAGCGTGAAGCAGCTATTGAAGCGGCTCAATGG GAATTAACCTCTGCCATCAAGCAGGAGGAGCAGGCCACTACAGCGCTCAA GAAAGCTGAGAAAGGAAAGAAAAAAGCGAGTATCAGCAAAGCGAAGCAGC AGTTGAAAAAAGCGGAGCAGGCTCACAAGGCAGCAGAAACTCAACTCAAA AAAGCAGAGGATGCAGCCAAAGAAAAGCTGACAACGAAATATTCTCCACG TAAACAGTCCAAGTATCCGGAAAGCAGCACCGGGCGACGTCTGGCATTTG CTCGCTGGCTAACCAACCGTCAAAATCCGTTGACGGCCCGTGTGGCGATG AATCATATCTGGTTGCGACACTTTGGT
back to top

Coding sequence (CDS) from alignment at M-pyrifera_M_contig81560:1..927-

>mRNA_M-pyrifera_M_contig81560.19087.1 ID=mRNA_M-pyrifera_M_contig81560.19087.1|Name=mRNA_M-pyrifera_M_contig81560.19087.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=1830bp|location=Sequence derived from alignment at M-pyrifera_M_contig81560:1..927- (Macrocystis pyrifera P11B4 male)
ATGGATGACGTCGTGAAACATACTTCGCAGACATTCCTGGGAATCACCGT
CGGTTGTGCGAAATGCCACGATCACATGTATGATCCGATCAAACAGACTG
AATACTATCAGATGCGGGCTATTTTCGAACCGTATCACGTTCGTACAGAC
CGGGTGGAAGGCGTACTGGATGTCTCTAAGAATGGGATTCCTCGTGCCTA
CGATCGTTCCTTGACGTCGAAGACCTGGTTTCTGGAAGCCGGCGACGAGC
GACGTCCTGTGAAAGACAAAAGTATTCCGCCGGGAGTCCCTGAATTCCTG
GGAGGGAAATATGAAGTCGAGCCGGTCTCACTGCCGTTGGTGGCCAGTCA
GCCTGCCCGGCGCGAGTTCGTCAAGCAAGATCTGCTCGATCAGGCCAAAG
AGACTATGGAGCAGGCCAAAGCACCGGAACAGCGGGCTGCTGCGGAAAGT
GCACTGGCAGTCCTGGAAGCCCAGTTTGCCATCGAAGCGATGGAAGTGGC
TGGTGATAAAAAATCAGATGCCTGGAAAACGGCAGCACAGAATCTGGTGA
AGCTACAGCGTGAAGCAGCTATTGAAGCGGCTCAATGGGAATTAACCTCT
GCCATCAAGCAGGAGGAGCAGGCCACTACAGCGCTCAAGAAAGCTGAGAA
AGGAAAGAAAAAAGCGAGTATCAGCAAAGCGAAGCAGCAGTTGAAAAAAG
CGGAGCAGGCTCACAAGGCAGCAGAAACTCAACTCAAAAAAGCAGAGGAT
GCAGCCAAAGAAAAGCTGACAACGAAATATTCTCCACGTAAACAGTCCAA
GTATCCGGAAAGCAGCACCGGGCGACGTCTGGCATTTGCTCGCTGGCTAA
CCAACCGTCAAAATCCGTTGACGGCCCGTGTGGCGATGAATCATATCTGG
TTGCGACACTTTGGTATGGATGACGTCGTGAAACATACTTCGCAGACATT
CCTGGGAATCACCGTCGGTTGTGCGAAATGCCACGATCACATGTATGATC
CGATCAAACAGACTGAATACTATCAGATGCGGGCTATTTTCGAACCGTAT
CACGTTCGTACAGACCGGGTGGAAGGCGTACTGGATGTCTCTAAGAATGG
GATTCCTCGTGCCTACGATCGTTCCTTGACGTCGAAGACCTGGTTTCTGG
AAGCCGGCGACGAGCGACGTCCTGTGAAAGACAAAAGTATTCCGCCGGGA
GTCCCTGAATTCCTGGGAGGGAAATATGAAGTCGAGCCGGTCTCACTGCC
GTTGGTGGCCAGTCAGCCTGCCCGGCGCGAGTTCGTCAAGCAAGATCTGC
TCGATCAGGCCAAAGAGACTATGGAGCAGGCCAAAGCACCGGAACAGCGG
GCTGCTGCGGAAAGTGCACTGGCAGTCCTGGAAGCCCAGTTTGCCATCGA
AGCGATGGAAGTGGCTGGTGATAAAAAATCAGATGCCTGGAAAACGGCAG
CACAGAATCTGGTGAAGCTACAGCGTGAAGCAGCTATTGAAGCGGCTCAA
TGGGAATTAACCTCTGCCATCAAGCAGGAGGAGCAGGCCACTACAGCGCT
CAAGAAAGCTGAGAAAGGAAAGAAAAAAGCGAGTATCAGCAAAGCGAAGC
AGCAGTTGAAAAAAGCGGAGCAGGCTCACAAGGCAGCAGAAACTCAACTC
AAAAAAGCAGAGGATGCAGCCAAAGAAAAGCTGACAACGAAATATTCTCC
ACGTAAACAGTCCAAGTATCCGGAAAGCAGCACCGGGCGACGTCTGGCAT
TTGCTCGCTGGCTAACCAACCGTCAAAATCCGTTGACGGCCCGTGTGGCG
ATGAATCATATCTGGTTGCGACACTTTGGT
back to top