mRNA_M-pyrifera_M_contig81548.19082.1 (mRNA) Macrocystis pyrifera P11B4 male
Overview
Homology
BLAST of mRNA_M-pyrifera_M_contig81548.19082.1 vs. uniprot
Match: A0A356KHP6_9BACT (Cobalamin-binding protein n=1 Tax=Planctomycetes bacterium TaxID=2026780 RepID=A0A356KHP6_9BACT) HSP 1 Score: 175 bits (444), Expect = 4.320e-52 Identity = 83/123 (67.48%), Postives = 95/123 (77.24%), Query Frame = 1 Query: 1 TWMPELVADAGGEALVTSPGDHAPTLDRKALAALRPDVVLLKPCGFDLARSHAEDALIARQLDGLPWPALEHGRVYLADGNAFFNRPGPRLLESLEILAACVHPEVFGDFAERHAASFERLAL 369 TWMPELV AGGEALVT PG HAPTL R LA LRPD+VL+KPCGF LA++ E + L GL WPAL GRVY+ADGNA+FNRPGPRL+ES EILAAC+HPE D AERHA +FER+ + Sbjct: 187 TWMPELVTAAGGEALVTEPGQHAPTLTRGDLAGLRPDLVLIKPCGFPLAQTRRELSAFLEGLSGLEWPALNTGRVYVADGNAYFNRPGPRLVESAEILAACLHPEACADLAERHAGAFERVQV 309
BLAST of mRNA_M-pyrifera_M_contig81548.19082.1 vs. uniprot
Match: A0A2D5XNB1_9BACT (Fe/B12 periplasmic-binding domain-containing protein n=1 Tax=Planctomycetes bacterium TaxID=2026780 RepID=A0A2D5XNB1_9BACT) HSP 1 Score: 169 bits (429), Expect = 1.010e-49 Identity = 81/120 (67.50%), Postives = 93/120 (77.50%), Query Frame = 1 Query: 4 WMPELVADAGGEALVTSPGDHAPTLDRKALAALRPDVVLLKPCGFDLARSHAEDALIARQLDGLPWPALEHGRVYLADGNAFFNRPGPRLLESLEILAACVHPEVFGDFAERHAASFERL 363 WMPELV AGG LVT+ GDHAPTLD +AL L PD VL+KPCGF LAR+ AE + + LD L W A + GRVYLADGNAFFNRPGPRL ESLEI+AACVHPE+F D AE H++ +ERL Sbjct: 201 WMPELVELAGGVPLVTAAGDHAPTLDEEALRELAPDTVLIKPCGFSLARTRAEASALCALLDRLGWKAWQEGRVYLADGNAFFNRPGPRLAESLEIMAACVHPELFEDMAEAHSSDYERL 320
BLAST of mRNA_M-pyrifera_M_contig81548.19082.1 vs. uniprot
Match: A0A800MFH4_9BACT (Cobalamin-binding protein n=1 Tax=Planctomycetes bacterium TaxID=2026780 RepID=A0A800MFH4_9BACT) HSP 1 Score: 167 bits (423), Expect = 7.470e-49 Identity = 81/120 (67.50%), Postives = 94/120 (78.33%), Query Frame = 1 Query: 4 WMPELVADAGGEALVTSPGDHAPTLDRKALAALRPDVVLLKPCGFDLARSHAEDALIARQLDGLPWPALEHGRVYLADGNAFFNRPGPRLLESLEILAACVHPEVFGDFAERHAASFERL 363 WMPELV AGG LVT+ GDHAPTLD AL L PDVVL+KPCGF+LAR+ AE + + LD L W A + GRV+LADGNAFFNRPGPRL ESLEI+AACVHPE+F D AE H++ +ERL Sbjct: 198 WMPELVELAGGVPLVTAAGDHAPTLDEDALRELVPDVVLIKPCGFNLARTRAEASALCALLDRLGWKAWQEGRVFLADGNAFFNRPGPRLAESLEIMAACVHPELFVDMAEVHSSDYERL 317
BLAST of mRNA_M-pyrifera_M_contig81548.19082.1 vs. uniprot
Match: A0A534WLR0_9DELT (Fe/B12 periplasmic-binding domain-containing protein n=4 Tax=Deltaproteobacteria TaxID=28221 RepID=A0A534WLR0_9DELT) HSP 1 Score: 158 bits (399), Expect = 1.950e-45 Identity = 80/117 (68.38%), Postives = 90/117 (76.92%), Query Frame = 1 Query: 4 WMPELVADAGGEALVTSPGDHAPTLDRKALAALRPDVVLLKPCGFDLARSHAEDALIARQLDGLPWPALEHGRVYLADGNAFFNRPGPRLLESLEILAACVHPEVFGDFAERHAASF 354 WMPEL+A AGGEALVT PG HAPTLDR ALAAL P+VVL+KPCGF L R+ E ++ L P RVYLADGNAFFNRPGPR++ESLEILAACVHPE+F DFA +H ASF Sbjct: 186 WMPELIALAGGEALVTRPGQHAPTLDRDALAALDPEVVLVKPCGFPLQRTVEELDVLREAL-----PPAWRARVYLADGNAFFNRPGPRIVESLEILAACVHPELFEDFAAKHVASF 297
BLAST of mRNA_M-pyrifera_M_contig81548.19082.1 vs. uniprot
Match: A0A2V6XSJ3_9BACT (Fe/B12 periplasmic-binding domain-containing protein n=1 Tax=Candidatus Rokubacteria bacterium TaxID=2053607 RepID=A0A2V6XSJ3_9BACT) HSP 1 Score: 159 bits (401), Expect = 4.240e-45 Identity = 76/120 (63.33%), Postives = 89/120 (74.17%), Query Frame = 1 Query: 4 WMPELVADAGGEALVTSPGDHAPTLDRKALAALRPDVVLLKPCGFDLARSHAEDALIARQLDGLPWPALEHGRVYLADGNAFFNRPGPRLLESLEILAACVHPEVFGDFAERHAASFERL 363 WMPEL+ AGG LVT PGDHAPT+ R AL AL PDVVL+KPCGF L R E AL+ L W A+E GRVY+ADGNA+FNRPGPR++ESLEILAAC+HPE F DF ++H S R+ Sbjct: 235 WMPELIERAGGIPLVTRPGDHAPTVTRDALLALTPDVVLIKPCGFPLGRIIEELALLRTSLPWESWRAVEEGRVYVADGNAYFNRPGPRIVESLEILAACLHPEAFDDFRDKHRDSVSRV 354
BLAST of mRNA_M-pyrifera_M_contig81548.19082.1 vs. uniprot
Match: A0A2V6VDM6_9BACT (Fe/B12 periplasmic-binding domain-containing protein n=1 Tax=Candidatus Rokubacteria bacterium TaxID=2053607 RepID=A0A2V6VDM6_9BACT) HSP 1 Score: 157 bits (396), Expect = 1.530e-44 Identity = 75/120 (62.50%), Postives = 89/120 (74.17%), Query Frame = 1 Query: 4 WMPELVADAGGEALVTSPGDHAPTLDRKALAALRPDVVLLKPCGFDLARSHAEDALIARQLDGLPWPALEHGRVYLADGNAFFNRPGPRLLESLEILAACVHPEVFGDFAERHAASFERL 363 WMPEL+ AGG LVT PGDHAPT+ R AL AL PDVVL+KPCGF L R E +L+ L W A++ GRVY+ADGNA+FNRPGPR++ESLEILAAC+HPE F DF +H AS R+ Sbjct: 216 WMPELIERAGGFPLVTRPGDHAPTVTRDALLALTPDVVLIKPCGFPLDRIIEELSLLRTSLPWESWRAVQEGRVYVADGNAYFNRPGPRIVESLEILAACLHPEAFEDFRSKHRASVRRV 335
BLAST of mRNA_M-pyrifera_M_contig81548.19082.1 vs. uniprot
Match: A0A2L0F6X8_SORCE (ABC transporter substrate-binding protein n=1 Tax=Sorangium cellulosum TaxID=56 RepID=A0A2L0F6X8_SORCE) HSP 1 Score: 154 bits (389), Expect = 8.940e-44 Identity = 79/120 (65.83%), Postives = 88/120 (73.33%), Query Frame = 1 Query: 4 WMPELVADAGGEALVTSPGDHAPTLDRKALAALRPDVVLLKPCGFDLARSHAEDALIARQLDGLPWPALEHGRVYLADGNAFFNRPGPRLLESLEILAACVHPEVFGDFAERHAASFERL 363 WMPEL+A AGGE LVT PGDHAPTL LAAL PDVVL+KPCGF L R+ AE L+ R L + A+ GRV+LADGNAFFNRPGPR++ESLEILAACVHP F D HA S RL Sbjct: 186 WMPELIALAGGEPLVTRPGDHAPTLSLADLAALDPDVVLIKPCGFALERTLAEVDLLPRVLPWSSYRAVAQGRVFLADGNAFFNRPGPRIVESLEILAACVHPGPFADARRAHARSVVRL 305
BLAST of mRNA_M-pyrifera_M_contig81548.19082.1 vs. uniprot
Match: A0A518CUL2_9BACT (Corrinoid ABC transporter substrate-binding protein n=1 Tax=Planctomycetes bacterium Pla163 TaxID=2528008 RepID=A0A518CUL2_9BACT) HSP 1 Score: 153 bits (387), Expect = 1.740e-43 Identity = 75/121 (61.98%), Postives = 88/121 (72.73%), Query Frame = 1 Query: 1 TWMPELVADAGGEALVTSPGDHAPTLDRKALAALRPDVVLLKPCGFDLARSHAEDALIARQLDGLPWPALEHGRVYLADGNAFFNRPGPRLLESLEILAACVHPEVFGDFAERHAASFERL 363 TWMPELV AGG ALVT PG HAPTL + L AL PDVVL+KPCGFDLAR+ E AL+ + L W A GRV++ADGNA+FNRPGPRL+ES EILAAC+HP D +HAA+ R+ Sbjct: 185 TWMPELVEIAGGTALVTVPGQHAPTLALEDLRALDPDVVLVKPCGFDLARTAEEAALLQKVLPWSEWRAAREGRVFVADGNAYFNRPGPRLVESAEILAACMHPSACEDLVTKHAAAMRRV 305
BLAST of mRNA_M-pyrifera_M_contig81548.19082.1 vs. uniprot
Match: A0A518BFP4_9BACT (Corrinoid ABC transporter substrate-binding protein n=1 Tax=Planctomycetes bacterium Pla133 TaxID=2528011 RepID=A0A518BFP4_9BACT) HSP 1 Score: 153 bits (387), Expect = 1.780e-43 Identity = 76/121 (62.81%), Postives = 86/121 (71.07%), Query Frame = 1 Query: 1 TWMPELVADAGGEALVTSPGDHAPTLDRKALAALRPDVVLLKPCGFDLARSHAEDALIARQLDGLPWPALEHGRVYLADGNAFFNRPGPRLLESLEILAACVHPEVFGDFAERHAASFERL 363 TW PELV AGG ALV G ++P L R LA L PDVV+LKPCGFDL R+ AE L+A L W A+ GRVYLADGNA+FNRPGPRL+ES EILAACVHP F D AERHA + R+ Sbjct: 185 TWCPELVRAAGGRALVAVAGQYSPVLGRAELANLDPDVVVLKPCGFDLERTEAELPLLAEALPWEAWRAVRRGRVYLADGNAYFNRPGPRLVESAEILAACVHPTEFADLAERHAGAVRRV 305
BLAST of mRNA_M-pyrifera_M_contig81548.19082.1 vs. uniprot
Match: A9EZ80_SORC5 (Putative periplasmic substrate-binding protein n=1 Tax=Sorangium cellulosum (strain So ce56) TaxID=448385 RepID=A9EZ80_SORC5) HSP 1 Score: 153 bits (386), Expect = 2.520e-43 Identity = 75/121 (61.98%), Postives = 88/121 (72.73%), Query Frame = 1 Query: 1 TWMPELVADAGGEALVTSPGDHAPTLDRKALAALRPDVVLLKPCGFDLARSHAEDALIARQLDGLPWPALEHGRVYLADGNAFFNRPGPRLLESLEILAACVHPEVFGDFAERHAASFERL 363 TWMPEL+ AGGE LVT PG+HAPTL ALAAL PDVV++KPCGF L R+ E L+ R L + A+ GRVY+ADGNAFFNRPGPR++ESLEILAAC HP +F D HA S R+ Sbjct: 185 TWMPELITLAGGEPLVTRPGEHAPTLSPAALAALDPDVVMIKPCGFTLERTLDELDLLPRVLPWATYRAVAQGRVYIADGNAFFNRPGPRIVESLEILAACAHPALFADARRAHARSVARI 305 The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig81548.19082.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_M-pyrifera_M_contig81548.19082.1 >prot_M-pyrifera_M_contig81548.19082.1 ID=prot_M-pyrifera_M_contig81548.19082.1|Name=mRNA_M-pyrifera_M_contig81548.19082.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=122bp MPELVADAGGEALVTSPGDHAPTLDRKALAALRPDVVLLKPCGFDLARSHback to top mRNA from alignment at M-pyrifera_M_contig81548:3..374+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_M-pyrifera_M_contig81548.19082.1 ID=mRNA_M-pyrifera_M_contig81548.19082.1|Name=mRNA_M-pyrifera_M_contig81548.19082.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=372bp|location=Sequence derived from alignment at M-pyrifera_M_contig81548:3..374+ (Macrocystis pyrifera P11B4 male)back to top Coding sequence (CDS) from alignment at M-pyrifera_M_contig81548:3..374+ >mRNA_M-pyrifera_M_contig81548.19082.1 ID=mRNA_M-pyrifera_M_contig81548.19082.1|Name=mRNA_M-pyrifera_M_contig81548.19082.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=732bp|location=Sequence derived from alignment at M-pyrifera_M_contig81548:3..374+ (Macrocystis pyrifera P11B4 male)back to top |