mRNA_M-pyrifera_M_contig8151.19072.1 (mRNA) Macrocystis pyrifera P11B4 male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_M-pyrifera_M_contig8151.19072.1
Unique NamemRNA_M-pyrifera_M_contig8151.19072.1
TypemRNA
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Homology
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BLAST of mRNA_M-pyrifera_M_contig8151.19072.1 vs. uniprot
Match: D7FQL2_ECTSI (5-formyltetrahydrofolate cyclo-ligase n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FQL2_ECTSI)

HSP 1 Score: 294 bits (752), Expect = 1.970e-97
Identity = 153/211 (72.51%), Postives = 172/211 (81.52%), Query Frame = 1 
Query:  100 ERKMALRKRIKLELKTMSQSAVDAASSAVAARLLASSRLTE---GSGGDAVSIYLAMPGELHTQAIISELFKRGKKVYIPKVLGPKSADMRMFPLRSEEEVDSFPLTKWKIPEPSEKLVLSREDGVLAGDIDVVVVPGMAFDKGCNRLGHGRGYYDCFFERVNKANAEKGRSPPVKMGVCFDEQVVDCVPTTPTDVRLDFVFTPSRTFTRD 723
            E+K ALRKRIK ELK MS  AV  AS+AVA RLL+  +L +   G GG AVS+YL+MP EL T AI+S LFKRGKKVYIPKVLG  SADMRMFP+RSEEEV SFPLTKWKI EPSE+LV SREDGV  GDI V++VP +A D  CNRLGHGRG+YDCFFERVNKA+ +KGR PPV +GVCFDEQVVDC+PT  TDVRLDFV TP+RTF RD
Sbjct:   34 EQKKALRKRIKSELKQMSDEAVGVASAAVAERLLSFPQLQQQEGGDGGGAVSVYLSMPKELGTSAIVSGLFKRGKKVYIPKVLGAASADMRMFPVRSEEEVASFPLTKWKISEPSEELVFSREDGVTEGDISVIIVPAVALDPTCNRLGHGRGHYDCFFERVNKASMDKGRPPPVTIGVCFDEQVVDCIPTESTDVRLDFVLTPTRTFRRD 244
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BLAST of mRNA_M-pyrifera_M_contig8151.19072.1 vs. uniprot
Match: A0A835ZF18_9STRA (5-formyltetrahydrofolate cyclo-ligase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZF18_9STRA)

HSP 1 Score: 191 bits (485), Expect = 1.730e-57
Identity = 102/208 (49.04%), Postives = 130/208 (62.50%), Query Frame = 1 
Query:   91 SFFERKMALRKRIKLELKTMSQSAVDAASSAVAARLLASSRLTEGSGGDAVSIYLAMPGELHTQAIISELFKRGKKVYIPKVLGPKSADMRMFPLRSEEEVDSFPLTKWKIPEPSEKLVLSREDGVLAGDIDVVVVPGMAFDKGCNRLGHGRGYYDCFFERVNKANAEKGRSPPVKMGVCFDEQVVDCVPTTPTDVRLDFVFTPSRTF 714
            S    K ALR  IK  L  + + A+ A+S A+   L     L   S    VS YL+MP E  T  I+  LF  GK+VY+PKV+GP  +DMRM+ + S  +++SFPLTKW IPEPS + VL+ EDG   GDID+V++PG AFD  CNRLGHG+GYYD F +R   A   +G   PV +G+C +EQVV  VP T  DV LDFV TP + F
Sbjct:    9 SIVSEKAALRSAIKTALGKLEKPAIAASSEAILGHL---KTLPCWSKSSVVSAYLSMPREAQTMPIMDALFTAGKRVYVPKVVGPDPSDMRMYQIESMGQIESFPLTKWNIPEPSLEAVLAAEDGTTTGDIDLVILPGCAFDARCNRLGHGKGYYDSFLKRCFAAAKARGNPIPVTVGICLEEQVVPSVPVTDHDVPLDFVVTPEQVF 213
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BLAST of mRNA_M-pyrifera_M_contig8151.19072.1 vs. uniprot
Match: W4FG50_9STRA (5-formyltetrahydrofolate cyclo-ligase n=1 Tax=Aphanomyces astaci TaxID=112090 RepID=W4FG50_9STRA)

HSP 1 Score: 161 bits (407), Expect = 1.040e-45
Identity = 91/207 (43.96%), Postives = 128/207 (61.84%), Query Frame = 1 
Query:  106 KMALRKRIKLELKTMSQSAVDAASSAVAARLLASSRLTEGSGGDAVSIYLAMPGELHTQAIISELFKRGKKVYIPKVLGPKSADMRMFPLRSEEEVDSFPLTKWKIPEP--SEKLVLSREDGVLAGDIDVVVVPGMAFDKGCNRLGHGRGYYDCFFERVNKANAEKGRSPPVKMGVCFDEQVVDCVPTTPTDVRLDFVFTPSRTFTR 720
            K  +RK I L+L+  S   V +AS+ + + L+      +     +V  YL MP E  T AII E+F +GKK+Y+PKV GP+S DM M  + S+ ++D+FP +KW IPEP       L RE+ +   D+D+++VPG+AFD  CNRLGHG+GYYDCFFER   A+  +G  PP  +G+   EQV+D VPT+  D  LD + TP    +R
Sbjct:   18 KQVIRKDIDLKLRQYSADEVASASAQLTSHLVQHPAFVQ---AKSVCAYLPMPNEASTAAIIHEIFAQGKKLYVPKVTGPRSEDMVMLHVTSQRDIDTFPKSKWNIPEPLLDHPNGLPRENALDVTDLDLILVPGVAFDAHCNRLGHGKGYYDCFFERY--ASKCRGALPPT-LGIALPEQVIDQVPTSAHDKALDGLVTPRGVLSR 218
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BLAST of mRNA_M-pyrifera_M_contig8151.19072.1 vs. uniprot
Match: A0A067D9P6_SAPPC (5-formyltetrahydrofolate cyclo-ligase n=2 Tax=Saprolegnia TaxID=4769 RepID=A0A067D9P6_SAPPC)

HSP 1 Score: 155 bits (393), Expect = 1.050e-43
Identity = 92/201 (45.77%), Postives = 120/201 (59.70%), Query Frame = 1 
Query:  106 KMALRKRIKLELKTMSQSAVDAASSAVAARLLASSRLTEGSGGDAVSIYLAMPGELHTQAIISELFKRGKKVYIPKVLGPKSADMRMFPLRSEEEVDSFPLTKWKIPEPSEKLVLSRE--DGVLAGDIDVVVVPGMAFDKGCNRLGHGRGYYDCFFERVNKANAEKGRSPPVKMGVCFDEQVVDCVPTTPTDVRLDFVFTP 702
            K  LRK I   L+ +S+  V A S A+A  ++A   L       +VS+YLAM  E  T  ++  LF  GK+VY+PKV+G KS DM M  + S  E+ +FP +KW IPEP   L   R   D + A D+D+V+VPG+AFD  CNRLGHG+GYYDCF ER    N   G   PV +G+  + Q+VD VPT+  D  LD V TP
Sbjct:    9 KAVLRKHIAGLLRALSRDEVVAQSEALAQHVVA---LDVFRHARSVSVYLAMEAEAKTSTLVDALFAAGKRVYVPKVIGAKSEDMVMLRVDSATEMATFPKSKWGIPEPPSSLPSGRPRIDALDALDVDIVLVPGVAFDPRCNRLGHGKGYYDCFLERYASRN---GGKLPVTIGIALEAQIVDAVPTSGHDKMLDMVATP 203
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BLAST of mRNA_M-pyrifera_M_contig8151.19072.1 vs. uniprot
Match: A0A1V9ZFD4_9STRA (5-formyltetrahydrofolate cyclo-ligase n=1 Tax=Achlya hypogyna TaxID=1202772 RepID=A0A1V9ZFD4_9STRA)

HSP 1 Score: 152 bits (385), Expect = 1.760e-42
Identity = 92/202 (45.54%), Postives = 124/202 (61.39%), Query Frame = 1 
Query:  106 KMALRKRIKLELKTMSQSAVDAASSAVAARLLASSRLTEGSGGDAVSIYLAMPGELHTQAIISELFKRGKKVYIPKVLGPKSADMRMFPLRSEEEVDSFPLTKWKIPEPSEKLV--LSREDGVLAGDIDVVVVPGMAFDKGCNRLGHGRGYYDCFFERVNKANAEKGRSPPVKMGVCFDEQVVDCVPTTPTDVRLDFVFTPS 705
            K ALRK+++  L+ M+  A+ A S+A+A  ++A   +        V +YL+M  E  T  I+++LF  GKKVY+PKV G +S DM M  + SE E+ SFP +KW IPEP E L     R + + A DIDVV+VPG+AFD   NRLGHG+GYYDCFF+R    N   G   P  +G+  D Q+V  VPT+  D  LD V TP+
Sbjct:   16 KKALRKQVEGALRAMTPGAIVAQSNALAQHIIALDAIRT---AQCVCVYLSMEHEARTAPILTQLFAAGKKVYVPKVTGMRSEDMVMLQVDSENEMASFPKSKWGIPEPPELLPNGTPRINALDALDIDVVLVPGVAFDAHRNRLGHGKGYYDCFFQRYALRN---GGELPATIGLALDVQMVPAVPTSDHDKVLDMVATPT 211
[Close]
BLAST of mRNA_M-pyrifera_M_contig8151.19072.1 vs. uniprot
Match: A0A0G4F0S7_VITBC (5-formyltetrahydrofolate cyclo-ligase n=1 Tax=Vitrella brassicaformis (strain CCMP3155) TaxID=1169540 RepID=A0A0G4F0S7_VITBC)

HSP 1 Score: 153 bits (387), Expect = 2.370e-42
Identity = 82/204 (40.20%), Postives = 128/204 (62.75%), Query Frame = 1 
Query:  100 ERKMALRKRIKLELKTMSQSAVDAASSAVAARLLASSRLTEGSGGDAVSIYLAMP-GELHTQAIISELFKRGKKVYIPKVLGPKSADMRMFPLRSEEEVDSFPLTKWKIPEPSEKLVLSREDGVLAGDIDVVVVPGMAFDKGCNRLGHGRGYYDCFFERVNKANAEKGRSPPVKMGVCFDEQVVDC--VPTTPTDVRLDFVFTP 702
            E+K ALR++++ +LK++S  +++  S+AV A+L              V +YL+MP GE+ T  ++ E F++GK+V++P+V+G    DMRM  + S +E+ SFP++ W IPE S    L REDG   GDID+V+ PG+AFD+   RLGHG+GYYDCF  R+  +  ++GR     +G+   EQ++    +P    D+ LD+V TP
Sbjct:   31 EQKKALRRQVRGQLKSLSHESIEPQSAAVFAQLSQHPTFVR---SQCVCVYLSMPSGEIDTHTLVREAFRQGKRVFVPRVVGKNPPDMRMVEVSSVDEISSFPMSPWGIPELSLDETLRREDGTYCGDIDLVICPGVAFDQSGRRLGHGKGYYDCFLARLFASLKDRGRPRTTTIGIGLREQLLPLATIPMDSLDMFLDWVVTP 231
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BLAST of mRNA_M-pyrifera_M_contig8151.19072.1 vs. uniprot
Match: A0A7S0P191_9EUKA (5-formyltetrahydrofolate cyclo-ligase n=1 Tax=Calcidiscus leptoporus TaxID=127549 RepID=A0A7S0P191_9EUKA)

HSP 1 Score: 152 bits (383), Expect = 4.420e-42
Identity = 93/201 (46.27%), Postives = 118/201 (58.71%), Query Frame = 1 
Query:  106 KMALRKRIKLELKTMSQSAVDAASSAVAARLLASSRLTEGSGGDAVSIYLAMP-GELHTQAIISELFKRGKKVYIPKVLGPKSADMRMFPLRSEEEVDSFPLTKWKIPEPSEKLVLSREDGVLA-GDIDVVVVPGMAFDKGCNRLGHGRGYYDCFFERVNKANAEKGRSPPVKMGVCFDEQVVDCVPTTPTDVRLDFVFTP 702
            K ALRK ++  L+ +   AV AAS A   R LA   L   S     S+YLAMP GE  T  I+  LF  GK VYIP+V G    +M+M  +RS +EV S P   W IPEP +    +  DG  A   ID+VVVPG++FD+ C RLGHG+GYYD F ER+  A  E+G  P   +G+   EQ+V+ VP  P DVRLD+V  P
Sbjct:   17 KAALRKSMRTTLRELDADAVRAASRAACERALA---LDVVSQCTCASVYLAMPTGECQTDTILRSLFDAGKSVYIPRVTGKAREEMQMLQVRSMDEVTSLPRNAWGIPEPPQS---AAADGASAPSSIDLVVVPGVSFDRSCGRLGHGKGYYDSFLERLQAARHEQGLPPARTVGLGLQEQLVERVPLGPHDVRLDYVCLP 211
[Close]
BLAST of mRNA_M-pyrifera_M_contig8151.19072.1 vs. uniprot
Match: A0A8K1CD56_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1CD56_PYTOL)

HSP 1 Score: 151 bits (382), Expect = 5.410e-42
Identity = 82/201 (40.80%), Postives = 119/201 (59.20%), Query Frame = 1 
Query:  106 KMALRKRIKLELKTMSQSAVDAASSAVAARLLASSRLTEGSGGDAVSIYLAMPGELHTQAIISELFKRGKKVYIPKVLGPKSADMRMFPLRSEEEVDSFPLTKWKIPEP--SEKLVLSREDGVLAGDIDVVVVPGMAFDKGCNRLGHGRGYYDCFFERVNKANAEKGRSPPVKMGVCFDEQVVDCVPTTPTDVRLDFVFTP 702
            K ALRK I   L+ +    +   S A+A R+ A   L E     A+S+YL MP E  T+ I++  F   KKVY+PK++G  + D++M    S E++D+FP  KW+IP+P         R D + + D+D+V++PG+AFD+   RLGHG+GYYD F  R+ +A  E  R  PV +G+C   Q+VD VP +P D  LD + TP
Sbjct:   11 KKALRKSIAASLRAIEDQEITRQSDAIAQRIAA---LPEFQQAMALSVYLHMPKEAATRNILTHSFAEKKKVYVPKIVGKGAEDLKMVHASSLEDIDAFPKDKWQIPDPPLENSAGEPRNDAITSRDLDLVLLPGVAFDRSGGRLGHGKGYYDSFLRRLTEAYDEHNRPLPVTVGICLSSQLVDAVPLSPHDRMLDVIVTP 208
[Close]
BLAST of mRNA_M-pyrifera_M_contig8151.19072.1 vs. uniprot
Match: A0A024UKC7_9STRA (5-formyltetrahydrofolate cyclo-ligase n=1 Tax=Aphanomyces invadans TaxID=157072 RepID=A0A024UKC7_9STRA)

HSP 1 Score: 149 bits (377), Expect = 2.640e-41
Identity = 87/201 (43.28%), Postives = 120/201 (59.70%), Query Frame = 1 
Query:  106 KMALRKRIKLELKTMSQSAVDAASSAVAARLLASSRLTEGSGGDAVSIYLAMPGELHTQAIISELFKRGKKVYIPKVLGPKSADMRMFPLRSEEEVDSFPLTKWKIPEPSEKLVLS--REDGVLAGDIDVVVVPGMAFDKGCNRLGHGRGYYDCFFERVNKANAEKGRSPPVKMGVCFDEQVVDCVPTTPTDVRLDFVFTP 702
            K ALRK I  +L+ ++   +  AS+ + A L+             V  YL MP E  T  II E+F +GKK+Y+PKV GP+S DM M  + S+ ++D+FP +KW IPEP  +      R+  +   D+D+++VPG+AFD  CNRLGHG+GYYDCFF+R   A+   G  PP+ +GV   EQ+V  VPT   D  LD V TP
Sbjct:    8 KKALRKDIDQKLRQLTADEIAEASAQLTAHLIQHPAFVM---AKTVCAYLPMPNEASTSGIIDEIFAQGKKLYVPKVTGPRSEDMVMLHVASQRDIDAFPKSKWNIPEPWFEHPHGGLRDSALDEVDLDLILVPGVAFDGQCNRLGHGKGYYDCFFDRY--ASKTNGLLPPM-LGVALAEQIVSRVPTCEHDKALDAVVTP 202
[Close]
BLAST of mRNA_M-pyrifera_M_contig8151.19072.1 vs. uniprot
Match: A0A485KPN3_9STRA (5-formyltetrahydrofolate cyclo-ligase n=1 Tax=Aphanomyces stellatus TaxID=120398 RepID=A0A485KPN3_9STRA)

HSP 1 Score: 149 bits (375), Expect = 7.610e-41
Identity = 88/202 (43.56%), Postives = 123/202 (60.89%), Query Frame = 1 
Query:  106 KMALRKRIKLELKTMSQSAVDAASSAVAARLLASSRLTEGSGGDAVSIYLAMPGELHTQAIISELFKRGKKVYIPKVLGPKSADMRMFPLRSEEEVDSFPLTKWKIPEPSEKLV--LSREDGVLAGDIDVVVVPGMAFDKGCNRLGHGRGYYDCFFERVNKANAEKGRSPPVKMGVCFDEQVVDCVPTTPTDVRLDFVFTPS 705
            K  LRK I  +LK M++  + AAS+ +   L+    L E     +V  YLAMP E  T  I+ E+F +GK++Y+PKV G  S DM M  + SE +++SFP +KW IPEP+  L   L+R + +   D+D+++VPG+AFD  CNRLGHG+GYYD FFER     A+     P  +G+    Q+VD VPT+  D  LD V TP+
Sbjct:   22 KKTLRKDIDHQLKHMAREDIAAASANLQRHLVT---LPEFIRAKSVCAYLAMPNEASTDTILREIFAQGKQLYVPKVTGGNSEDMLMLRVESEADIESFPKSKWNIPEPALLLPSGLARLNALDTLDVDLIIVPGVAFDASCNRLGHGKGYYDSFFERYA---AKADGHLPATVGIALALQLVDSVPTSAHDRVLDMVVTPN 217
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig8151.19072.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FQL2_ECTSI1.970e-9772.515-formyltetrahydrofolate cyclo-ligase n=2 Tax=Ecto... [more]
A0A835ZF18_9STRA1.730e-5749.045-formyltetrahydrofolate cyclo-ligase n=1 Tax=Trib... [more]
W4FG50_9STRA1.040e-4543.965-formyltetrahydrofolate cyclo-ligase n=1 Tax=Apha... [more]
A0A067D9P6_SAPPC1.050e-4345.775-formyltetrahydrofolate cyclo-ligase n=2 Tax=Sapr... [more]
A0A1V9ZFD4_9STRA1.760e-4245.545-formyltetrahydrofolate cyclo-ligase n=1 Tax=Achl... [more]
A0A0G4F0S7_VITBC2.370e-4240.205-formyltetrahydrofolate cyclo-ligase n=1 Tax=Vitr... [more]
A0A7S0P191_9EUKA4.420e-4246.275-formyltetrahydrofolate cyclo-ligase n=1 Tax=Calc... [more]
A0A8K1CD56_PYTOL5.410e-4240.80Uncharacterized protein n=1 Tax=Pythium oligandrum... [more]
A0A024UKC7_9STRA2.640e-4143.285-formyltetrahydrofolate cyclo-ligase n=1 Tax=Apha... [more]
A0A485KPN3_9STRA7.610e-4143.565-formyltetrahydrofolate cyclo-ligase n=1 Tax=Apha... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig8151contigM-pyrifera_M_contig8151:489..4474 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-19
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score301.6
Seed ortholog evalue3.4e-79
Seed eggNOG ortholog2880.D7FQL2
Preferred nameMTHFS
KEGG rclassRC00183
KEGG koko:K01934,ko:K02731,ko:K22255
KEGG ReactionR02301
KEGG Pathwayko00670,ko01100,ko03050,map00670,map01100,map03050
KEGG ModuleM00337,M00340
Hectar predicted targeting categorysignal peptide
GOsGO:0000166,GO:0003674,GO:0003824,GO:0004857,GO:0005488,GO:0005515,GO:0005524,GO:0005542,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005739,GO:0005759,GO:0005829,GO:0006082,GO:0006520,GO:0006536,GO:0006575,GO:0006725,GO:0006730,GO:0006732,GO:0006760,GO:0006766,GO:0006767,GO:0006778,GO:0006779,GO:0006783,GO:0006807,GO:0006950,GO:0006952,GO:0008144,GO:0008150,GO:0008152,GO:0009056,GO:0009058,GO:0009064,GO:0009108,GO:0009109,GO:0009111,GO:0009396,GO:0009397,GO:0009605,GO:0009607,GO:0009617,GO:0009987,GO:0015942,GO:0016053,GO:0016054,GO:0016874,GO:0016879,GO:0016882,GO:0016999,GO:0017076,GO:0017144,GO:0018130,GO:0019438,GO:0019439,GO:0019752,GO:0019842,GO:0019899,GO:0030234,GO:0030272,GO:0030554,GO:0031406,GO:0031974,GO:0032553,GO:0032555,GO:0032559,GO:0032780,GO:0032787,GO:0033013,GO:0033014,GO:0033218,GO:0034641,GO:0035639,GO:0035999,GO:0036094,GO:0042030,GO:0042168,GO:0042219,GO:0042365,GO:0042398,GO:0042440,GO:0042558,GO:0042559,GO:0042560,GO:0042737,GO:0042742,GO:0043086,GO:0043167,GO:0043168,GO:0043177,GO:0043207,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043233,GO:0043436,GO:0043462,GO:0043603,GO:0043604,GO:0043648,GO:0043649,GO:0044092,GO:0044237,GO:0044238,GO:0044248,GO:0044249,GO:0044270,GO:0044271,GO:0044281,GO:0044282,GO:0044283,GO:0044422,GO:0044424,GO:0044429,GO:0044444,GO:0044446,GO:0044464,GO:0046148,GO:0046394,GO:0046395,GO:0046483,GO:0046653,GO:0046655,GO:0046657,GO:0046700,GO:0050790,GO:0050830,GO:0050896,GO:0051117,GO:0051186,GO:0051187,GO:0051188,GO:0051336,GO:0051346,GO:0051704,GO:0051707,GO:0060589,GO:0060590,GO:0065007,GO:0065009,GO:0070013,GO:0071704,GO:0072341,GO:0097159,GO:0097367,GO:0098542,GO:0098772,GO:1901265,GO:1901360,GO:1901361,GO:1901362,GO:1901363,GO:1901564,GO:1901565,GO:1901566,GO:1901575,GO:1901576,GO:1901605
EggNOG free text desc.5-formyltetrahydrofolate cyclo-ligase activity
EggNOG OGsCOG0212@1,KOG3093@2759
Ec32 ortholog description5-formyltetrahydrofolate cyclo-ligase
Ec32 orthologEc-01_009140.1
EC3.4.25.1,6.3.3.2
COG Functional cat.H
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko00002,ko01000,ko01002,ko03051,ko04131
Exons4
Model size738
Cds size738
Stop0
Start0
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig8151.19072.1prot_M-pyrifera_M_contig8151.19072.1Macrocystis pyrifera P11B4 malepolypeptideM-pyrifera_M_contig8151 489..4474 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622816721.807246-CDS-M-pyrifera_M_contig8151:488..6051622816721.807246-CDS-M-pyrifera_M_contig8151:488..605Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig8151 489..605 -
1692278140.1597614-CDS-M-pyrifera_M_contig8151:488..6051692278140.1597614-CDS-M-pyrifera_M_contig8151:488..605Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig8151 489..605 -
1622816721.8196497-CDS-M-pyrifera_M_contig8151:1640..17051622816721.8196497-CDS-M-pyrifera_M_contig8151:1640..1705Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig8151 1641..1705 -
1692278140.1779783-CDS-M-pyrifera_M_contig8151:1640..17051692278140.1779783-CDS-M-pyrifera_M_contig8151:1640..1705Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig8151 1641..1705 -
1622816721.8343804-CDS-M-pyrifera_M_contig8151:2817..30401622816721.8343804-CDS-M-pyrifera_M_contig8151:2817..3040Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig8151 2818..3040 -
1692278140.1903918-CDS-M-pyrifera_M_contig8151:2817..30401692278140.1903918-CDS-M-pyrifera_M_contig8151:2817..3040Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig8151 2818..3040 -
1622816721.8458717-CDS-M-pyrifera_M_contig8151:4141..44741622816721.8458717-CDS-M-pyrifera_M_contig8151:4141..4474Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig8151 4142..4474 -
1692278140.1995127-CDS-M-pyrifera_M_contig8151:4141..44741692278140.1995127-CDS-M-pyrifera_M_contig8151:4141..4474Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig8151 4142..4474 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_M-pyrifera_M_contig8151.19072.1

>prot_M-pyrifera_M_contig8151.19072.1 ID=prot_M-pyrifera_M_contig8151.19072.1|Name=mRNA_M-pyrifera_M_contig8151.19072.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=246bp
VASTATAAAAAAAAAATAAAPEGGGGGEGESFFERKMALRKRIKLELKTM
SQSAVDAASSAVAARLLASSRLTEGSGGDAVSIYLAMPGELHTQAIISEL
FKRGKKVYIPKVLGPKSADMRMFPLRSEEEVDSFPLTKWKIPEPSEKLVL
SREDGVLAGDIDVVVVPGMAFDKGCNRLGHGRGYYDCFFERVNKANAEKG
RSPPVKMGVCFDEQVVDCVPTTPTDVRLDFVFTPSRTFTRDDDDGD
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mRNA from alignment at M-pyrifera_M_contig8151:489..4474-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_M-pyrifera_M_contig8151.19072.1 ID=mRNA_M-pyrifera_M_contig8151.19072.1|Name=mRNA_M-pyrifera_M_contig8151.19072.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=3986bp|location=Sequence derived from alignment at M-pyrifera_M_contig8151:489..4474- (Macrocystis pyrifera P11B4 male)
GTAGCATCAACAGCAACAGCAGCAGCGGCGGCAGCGGCAGCGGCAGCAAC
AGCAGCAGCGCCCGAAGGTGGAGGTGGCGGCGAAGGAGAGAGTTTCTTCG
AGCGGAAGATGGCTCTCAGGAAACGGATTAAGCTAGAGCTGAAAACGATG
AGCCAGTCGGCGGTGGACGCGGCCTCGAGTGCAGTGGCGGCGAGATTGCT
GGCGTCCTCTCGCCTCACGGAGGGCAGCGGCGGCGACGCCGTGAGCATCT
ACCTAGCTATGCCCGGAGAGCTGCACACCCAGGCCATTATCAGCGAGCTG
TTCAAACGGGGCAAGAAAGTGTATATTCCCAAGGTGAGGCCGTCGGTCAT
GCCCTCAGATTACGACAACAGCATCAACCAAAAGGTTGTTTCGCATTAGA
CAACGAGATCGAGACGTTGTGAGGAAGGCCCAACAATGCTACTCTGTACT
GCCGTACCACAGCTTGCTCCGCTTTCACAGCATATTCGTATCGGGTACCA
GGTACCTGGTGTTACGGAGCGTTCCAAAGCAAGGTGGTGCGCTGCAAGGA
AGAACACCCGGCCTCGCTATGTAGCTTTCTTGGCAAAATATATGCGTCGC
GTCCGCGGTCCCTCTAGACTGCTGTCAAAAGCGATCGAGCGCATTTCTAC
GGAATCCCCCAATCTCGCCCTGCTCGGCTGTAACAGTGTTGCTGTGGGCA
AAGGCGGTATCGATTCGCCCTGGAAGCAGTCAGTACGAGCGATAGCAACA
GCTCTCCAGCTGCAGCAACAGAGGAGAAACAGATGAGAAGGGCATAAGAG
TCCCAAGAGTCCAGAGCCCCACCAGACAAAACAAAAGAAAAAATGTTCGC
TCACCAGCTTCGACCTGACTTCAAAACCCACTCACTCTAAAATCGGTCGC
CACATCCAGTCGACACTCACAACAACCCCCAAAACCCTCTCGTACGTACG
CGCAGCCCACCGGCGGACTGAGATGCTTCCAACCGCGTGTTTAGCCCCGT
GGTGGAGCCGAGTCTCGCGGGCACATGTCCATCCAACCGAGAACCGAGCG
TGTCAAATATCTACAGTAGTTAGCCCCTTTTGAGTGACCTCGCGACAAGG
ACAAAGTTTATGAGGGACCTCAATTTTTTGCGCACCGTTGTTGTGTGGGC
TTACCGGTACCAATTCTGGTAAGGGTCGTTGGTATACAAGGAACCTACTC
TATCGAACGCACTACTATTACGAGGGACCATGGTTAACAGGACCAAATGT
TTTTACTAAAAATAGGTAAATATGTAGGCTATTGTTCGTACCGTAGGTCG
TATTTACTATGGTCCCCCGTAAGAGATTTCTTGAAAGGGGCGGCTGCCTA
CATACTATTTCTTCTTTTCAACCCAAAAAAAAAAAAAAAAAATGGACCCA
AAAAAACGCTCTTCTGCTTCCCCTCCCTCAGTAGGTCTTGGGGCCCAAGT
CAGCGGACATGCGCATGTTTCCCCTTCGATCGGAGGAGGAGGTGGACTCC
TTCCCCCTGACCAAGTGGAAGATACCCGAGCCCTCGGAGAAGCTCGTCTT
ATCGCGAGAGGACGGGGTGCTCGCGGGCGACATCGACGTAGTGGTCGTTC
CCGGGATGGCCTTCGACAAGGGCTGCAATCGGCTGGGCCACGGCAGGGGC
TACTACGGTGAGCAGCAAGCAGCTGGATGGCAGTGGCGGGAAAGCCAGTA
CTCTTTGTACGTAGCGAAGGCAGAGGGCAGAGTTTTTTTTTTTTTTTTTG
CTGGCGGAGCTTATTGGCGTGTTGAGTGTTGTCGAACGGCTTGTTGACGG
TGTGTTGGACCTCTTGTCTCTGCAGGCGGCAACATCTGCCAGTAGTACAA
AACTGGTACCTGGTACCAGCAACTTGTAGTACGGTATACCTGGCACCTGG
TAAGTATGAGTACGTACGTATTGCTGTAGCAGTTGTACGGTATTGTCCCA
CAGTAGATTACTGGAGCAGTCAAAACAACGTTCAGTAGGTCTATGTACGT
ATTGTAGGCACGTAGCATTGGCGTCCTGCAGCGAGTCCTTTCGAAATGGA
ACAATGGGCTCGGCTTTTGCGCGATGCGCTGGCCGTCTTCCCGTGTGTCC
GCGACCGAAGGTTTCGAATGGGGAAAGCTGAAAGGATGCACACGCGCTCA
TTGTTGTTGCCGCTGGAAATGTGTTGTACTGGTGAATCCACTCTCTTTTT
CCCCTCGTGGTCGGTTGCGCATGAGAAAAAACAGTTGCGCACGTTTTGAG
ATGACTCACCTGTGCAGTTGATACTGTCGCTTCCCTGAGGAGGGCGTTCG
CTTGATTTATGCTTGTTTGTCGCCGGCGTGCCCAAGCGATATATGGATAA
AAGATATAATAAACCAAGCGAAACGGTAAAACTTGTGGTCCCACCTTACG
ACTGCTGCGTGTTTTGTGTACGAGTATGGGATTTATTTCTGAGTTCAAGT
CTTTTGGGCGTGTCTTGTGTGTTTGTGTGCGTATCAGATTTTCGAGTGTT
TGCACGTAAATGTCCTATTGTGTAGTTGTTATTGCTGTTTTGATCACACT
ATGAATACAGTAGTTGATCGCCACAATCTAGCCCGCTGTCTCAAGACAGG
CCCCATTAATTATCGAGTGGAGTGGTACCTCAGGGTTTTTTGTATATATA
GTCCTGGTACTATGCGAATAATGCGTTTGTGTTTGTCTGTGTGTGTTTCC
GTGTTTACGACCGATCGGGCTGCTGTTGTATCGCTGTTGTCCTGTCTGTC
CGTCGTCTCCCCACACCAGATTGCTTCTTCGAGCGCGTCAACAAAGCGAA
CGCCGAAAAGGGAAGGTCACCGCCAGTCAAGATGGTGAGTGGGCACCCGT
CTTTGTGTTTTTAGTATAGAATTCTCCCCCCAACACTTTTTTTTCGCATT
CGGCTTATTGATTTGCGGCTGTTGTTTTCGTCGTCGTGTGTTCGCTGACA
TCGATTTTCTTATTTGGTTGAGAGCGGACAGAGGCCAGACCCCCGCTTGT
CCCCGTCCATAAAGATCACGACGGCATGTTGCTTTGGTCTCAACGCAGGT
TTTGATTGAATGAGGTCAGCATACTACCTTCTGGGGTAGGAGTTATGGTT
TTGGCTGTTGCGCCTTCTTTTCGCTTTGCGTGCGTGTGTGTCGACGCAAC
CTGTGCCCACGGCTTGTCGTCTCCCCACCAATACTGATGTACGGCAGCAG
TGTGCATCCATAGTTTTGTTTTTTTGTCCCTGTTGCAATATGGTTTTATT
TCGCTCTGTAAGGAAGCTTTTCCTGCTGATGTAAAGATGAAAGAAGCTCT
GCAATCCAACTCATCAGCATGCATGTAGTCGCACCTGGTACATAGATACA
CTCCGTACACATGCATTACGTATGTAGGATACGTATGCATTGTGACACAC
TTCGCATGCATGTATCACGTAGGATATGTGTGCTTGCACAGACATCAGTC
TGGTCGTAAACAGTTGCATTTAGACCTTTTGTGGTCATCCAAAACTCCTT
TGTACCTGGTATTTTCCTGGGCTTTTCACGGGTCATAACCCGACCCGCGG
GTCGGGTCAGAAAAAGGTTTTGACATCTCACGGGTCGGCTCGGATCGGGT
TGGGTGGGGTGAGGAGGTTTTTAAACTATCACGGGTCGGGTTGGGTCACC
CACACCCGACCCGACCCGACCTGTCCCGCGAGGTTTGACCCGACCCGTGA
ATCGCCCTAATTATTACTTTCGATCACACTAGCTTGAGATGTATCACCTT
GCATCAACCTCTGGGCCTTAAGTCGCCACCATCTCCTCTGCCACGCCACG
CGTTTGTCCCACGTTCTCGCGCTTGCGATAAACGCTCATGACGTCCGACA
TGTACATGGGACGGGACAGGGCGTTTGCTTTGACGAACAGGTGGTGGACT
GCGTACCGACGACCCCTACCGACGTGCGGTTAGATTTCGTCTTCACGCCG
TCCCGAACGTTCACGCGTGACGACGACGACGGCGAC
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Coding sequence (CDS) from alignment at M-pyrifera_M_contig8151:489..4474-

>mRNA_M-pyrifera_M_contig8151.19072.1 ID=mRNA_M-pyrifera_M_contig8151.19072.1|Name=mRNA_M-pyrifera_M_contig8151.19072.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=1476bp|location=Sequence derived from alignment at M-pyrifera_M_contig8151:489..4474- (Macrocystis pyrifera P11B4 male)
GTAGCATCAACAGCAACAGCAGCAGCGGCGGCAGCGGCAGCGGCAGCAAC
AGCAGCAGCGCCCGAAGGTGGAGGTGGCGGCGAAGGAGAGAGTTTCTTCG
AGCGGAAGATGGCTCTCAGGAAACGGATTAAGCTAGAGCTGAAAACGATG
AGCCAGTCGGCGGTGGACGCGGCCTCGAGTGCAGTGGCGGCGAGATTGCT
GGCGTCCTCTCGCCTCACGGAGGGCAGCGGCGGCGACGCCGTGAGCATCT
ACCTAGCTATGCCCGGAGAGCTGCACACCCAGGCCATTATCAGCGAGCTG
TTCAAACGGGGCAAGAAAGTGTATATTCCCAAGGTAGCATCAACAGCAAC
AGCAGCAGCGGCGGCAGCGGCAGCGGCAGCAACAGCAGCAGCGCCCGAAG
GTGGAGGTGGCGGCGAAGGAGAGAGTTTCTTCGAGCGGAAGATGGCTCTC
AGGAAACGGATTAAGCTAGAGCTGAAAACGATGAGCCAGTCGGCGGTGGA
CGCGGCCTCGAGTGCAGTGGCGGCGAGATTGCTGGCGTCCTCTCGCCTCA
CGGAGGGCAGCGGCGGCGACGCCGTGAGCATCTACCTAGCTATGCCCGGA
GAGCTGCACACCCAGGCCATTATCAGCGAGCTGTTCAAACGGGGCAAGAA
AGTGTATATTCCCAAGGTCTTGGGGCCCAAGTCAGCGGACATGCGCATGT
TTCCCCTTCGATCGGAGGAGGAGGTGGACTCCTTCCCCCTGACCAAGTGG
AAGATACCCGAGCCCTCGGAGAAGCTCGTCTTATCGCGAGAGGACGGGGT
GCTCGCGGGCGACATCGACGTAGTGGTCGTTCCCGGGATGGCCTTCGACA
AGGGCTGCAATCGGCTGGGCCACGGCAGGGGCTACTACGGTCTTGGGGCC
CAAGTCAGCGGACATGCGCATGTTTCCCCTTCGATCGGAGGAGGAGGTGG
ACTCCTTCCCCCTGACCAAGTGGAAGATACCCGAGCCCTCGGAGAAGCTC
GTCTTATCGCGAGAGGACGGGGTGCTCGCGGGCGACATCGACGTAGTGGT
CGTTCCCGGGATGGCCTTCGACAAGGGCTGCAATCGGCTGGGCCACGGCA
GGGGCTACTACGATTGCTTCTTCGAGCGCGTCAACAAAGCGAACGCCGAA
AAGGGAAGGTCACCGCCAGTCAAGATGATTGCTTCTTCGAGCGCGTCAAC
AAAGCGAACGCCGAAAAGGGAAGGTCACCGCCAGTCAAGATGGGCGTTTG
CTTTGACGAACAGGTGGTGGACTGCGTACCGACGACCCCTACCGACGTGC
GGTTAGATTTCGTCTTCACGCCGTCCCGAACGTTCACGCGTGACGACGAC
GACGGCGACGGCGTTTGCTTTGACGAACAGGTGGTGGACTGCGTACCGAC
GACCCCTACCGACGTGCGGTTAGATTTCGTCTTCACGCCGTCCCGAACGT
TCACGCGTGACGACGACGACGGCGAC
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