mRNA_M-pyrifera_M_contig81500.19070.1 (mRNA) Macrocystis pyrifera P11B4 male
Overview
Homology
BLAST of mRNA_M-pyrifera_M_contig81500.19070.1 vs. uniprot
Match: A0A2D5B185_9BACT (LPS export ABC transporter ATP-binding protein n=1 Tax=Planctomycetes bacterium TaxID=2026780 RepID=A0A2D5B185_9BACT) HSP 1 Score: 370 bits (950), Expect = 6.330e-127 Identity = 188/262 (71.76%), Postives = 219/262 (83.59%), Query Frame = 1 Query: 16 SSPAPASDPILDVRGLVKAYKGRRVVDGVSFQISAGEIVGLLGPNGAGKTTSFRMTVGLVTPDAGEVWLGGRECGRLPMYQRARNGMGYLPQEPSIFRRMKVRDNVLAVLEAMPMKRGEREDRADELLESLDLTHIVGSLAETLSGGERRRLEIARALASEPKILMLDEPFAGVDPLAVDEIQGILHQLKAEGIGVLITDHNVRETLETTDRAYVIHRGQILREGSPAALISDPVVREVYLGDRFDEALVSRGVTAAEEEGL 801 + PAP D +L+VR LVK+Y+ RRVV+GVSF + AGEIVGLLGPNGAGKTTSFRMTVGL PD GEVWL REC RLPMY+RAR GMGYLPQE S+FRRM VRDN+LAVLEA + + ERE+RA ELL LDLTH+ ++AETLSGGERRRLEI RALASEP IL+LDEPFAGVDP+AV+EIQ ++ +L+ +GIGVLITDHNVRETL++TDRAY+IH G+IL+EG+ A LI DP VREVYLG F+ AL RGVTA EE GL Sbjct: 9 TGPAPHPDSLLEVRNLVKSYRRRRVVNGVSFYVRAGEIVGLLGPNGAGKTTSFRMTVGLTQPDQGEVWLRNRECSRLPMYKRARLGMGYLPQEASVFRRMSVRDNLLAVLEAQRLSKSEREERAGELLSELDLTHLALNVAETLSGGERRRLEICRALASEPTILLLDEPFAGVDPIAVEEIQDLIQKLRGKGIGVLITDHNVRETLQSTDRAYIIHEGRILKEGTAAELIGDPKVREVYLGKSFEPAL--RGVTAEEERGL 268
BLAST of mRNA_M-pyrifera_M_contig81500.19070.1 vs. uniprot
Match: A0A521L0J3_9BACT (LPS export ABC transporter ATP-binding protein n=1 Tax=Planctomycetes bacterium TaxID=2026780 RepID=A0A521L0J3_9BACT) HSP 1 Score: 358 bits (918), Expect = 2.760e-122 Identity = 181/256 (70.70%), Postives = 214/256 (83.59%), Query Frame = 1 Query: 34 SDPILDVRGLVKAYKGRRVVDGVSFQISAGEIVGLLGPNGAGKTTSFRMTVGLVTPDAGEVWLGGRECGRLPMYQRARNGMGYLPQEPSIFRRMKVRDNVLAVLEAMPMKRGEREDRADELLESLDLTHIVGSLAETLSGGERRRLEIARALASEPKILMLDEPFAGVDPLAVDEIQGILHQLKAEGIGVLITDHNVRETLETTDRAYVIHRGQILREGSPAALISDPVVREVYLGDRFDEALVSRGVTAAEEEGL 801 S+ +L+V GLVK YK RRVVDGVSF++ AGEIVGLLGPNGAGKTTSFRM VGL+TPDAG+V L G EC LPMY+RAR GMGYLPQEPSIFRRM VRDN+LAVLEA P+ R +R RADELL L+LTH+ +LAETLSGGERRRLEI RALASEP IL+LDEPFAGVDP+AV+EIQG++ +L+ G+G+LITDHNVRETL++TDRAY++H+GQILREG+ LI DP VREVYLG F+ V +++AEE L Sbjct: 3 SEALLEVSGLVKTYKRRRVVDGVSFRVQAGEIVGLLGPNGAGKTTSFRMAVGLITPDAGKVVLRGVECSNLPMYRRARLGMGYLPQEPSIFRRMAVRDNLLAVLEAQPLSRQQRHARADELLRELELTHLSDALAETLSGGERRRLEICRALASEPSILLLDEPFAGVDPIAVEEIQGLIRRLRERGLGILITDHNVRETLQSTDRAYILHQGQILREGTARELIDDPKVREVYLGKTFE---VGARLSSAEERAL 255
BLAST of mRNA_M-pyrifera_M_contig81500.19070.1 vs. uniprot
Match: A0A518EN12_9BACT (Lipopolysaccharide export system ATP-binding protein LptB n=1 Tax=Planctomycetes bacterium Poly30 TaxID=2528018 RepID=A0A518EN12_9BACT) HSP 1 Score: 356 bits (914), Expect = 1.380e-121 Identity = 175/254 (68.90%), Postives = 214/254 (84.25%), Query Frame = 1 Query: 40 PILDVRGLVKAYKGRRVVDGVSFQISAGEIVGLLGPNGAGKTTSFRMTVGLVTPDAGEVWLGGRECGRLPMYQRARNGMGYLPQEPSIFRRMKVRDNVLAVLEAMPMKRGEREDRADELLESLDLTHIVGSLAETLSGGERRRLEIARALASEPKILMLDEPFAGVDPLAVDEIQGILHQLKAEGIGVLITDHNVRETLETTDRAYVIHRGQILREGSPAALISDPVVREVYLGDRFDEALVSRGVTAAEEEGL 801 P LDVRGLVK+YKGRRVVDGV F + GEIVGLLGPNGAGKTTSFRMTVG+V PD G V LGG++C +LPM++RAR GMGYLPQE S+FR+M V+DNVLAVLEA+P+ R ER A+ LL+ L+L H+ S ++TLSGGERRRLE+AR+LA+ P IL+LDEPFAGVDP+ V+EIQG++ QL+ +GIG+LITDHNVRETL++T+RAY+IH+GQILREG+ LI+DP VREVYLG FD A +RGV+A EE GL Sbjct: 7 PPLDVRGLVKSYKGRRVVDGVGFHVEPGEIVGLLGPNGAGKTTSFRMTVGVVVPDEGTVTLGGKDCTKLPMFRRARLGMGYLPQESSVFRQMTVKDNVLAVLEALPLGRRERHSEAERLLKELELFHLAASRSDTLSGGERRRLELARSLATRPSILLLDEPFAGVDPINVEEIQGLIQQLRDQGIGILITDHNVRETLQSTERAYIIHQGQILREGTAEELIADPKVREVYLGRNFDVAPAARGVSAEEERGL 260
BLAST of mRNA_M-pyrifera_M_contig81500.19070.1 vs. uniprot
Match: A0A7C1WY87_9BACT (Lipopolysaccharide export system ATP-binding protein LptB n=1 Tax=Planctomycetes bacterium TaxID=2026780 RepID=A0A7C1WY87_9BACT) HSP 1 Score: 356 bits (913), Expect = 2.180e-121 Identity = 177/263 (67.30%), Postives = 216/263 (82.13%), Query Frame = 1 Query: 13 PSSPAPASDPILDVRGLVKAYKGRRVVDGVSFQISAGEIVGLLGPNGAGKTTSFRMTVGLVTPDAGEVWLGGRECGRLPMYQRARNGMGYLPQEPSIFRRMKVRDNVLAVLEAMPMKRGEREDRADELLESLDLTHIVGSLAETLSGGERRRLEIARALASEPKILMLDEPFAGVDPLAVDEIQGILHQLKAEGIGVLITDHNVRETLETTDRAYVIHRGQILREGSPAALISDPVVREVYLGDRFDEALVSRGVTAAEEEGL 801 PS+P+P +D +L+ RGLVKA++ RRVVDGVSF + GEIVGLLGPNGAGKTT+FRMTVGL PDAGEVWL GREC R+PM++RAR GMGYLPQE S+FR+M VRDN+LAVLE + R ++ RADE+L+ LDL + ++AETLSGGERRRLEI RALA+ P I +LDEPFAGVDP+AV+EIQG++ L+ G+GVLITDHNVRETLE+ DRAY+IH+GQILREG+ LI+DP VREVYLG FD + RGV+A E+ GL Sbjct: 4 PSAPSPHADALLETRGLVKAFRKRRVVDGVSFHVRKGEIVGLLGPNGAGKTTTFRMTVGLTHPDAGEVWLKGRECSRMPMFRRARLGMGYLPQEASVFRKMTVRDNILAVLETTKLTRRQQRIRADEILQELDLVRLATNIAETLSGGERRRLEICRALATHPSIFLLDEPFAGVDPIAVEEIQGLVRGLRDRGLGVLITDHNVRETLESVDRAYIIHQGQILREGTAEELIADPRVREVYLGRSFDRPV--RGVSAEEQRGL 264
BLAST of mRNA_M-pyrifera_M_contig81500.19070.1 vs. uniprot
Match: A0A7Y4SRE3_9BACT (Lipopolysaccharide export system ATP-binding protein LptB n=1 Tax=Planctomycetes bacterium TaxID=2026780 RepID=A0A7Y4SRE3_9BACT) HSP 1 Score: 354 bits (908), Expect = 6.460e-121 Identity = 179/244 (73.36%), Postives = 207/244 (84.84%), Query Frame = 1 Query: 70 AYKGRRVVDGVSFQISAGEIVGLLGPNGAGKTTSFRMTVGLVTPDAGEVWLGGRECGRLPMYQRARNGMGYLPQEPSIFRRMKVRDNVLAVLEAMPMKRGEREDRADELLESLDLTHIVGSLAETLSGGERRRLEIARALASEPKILMLDEPFAGVDPLAVDEIQGILHQLKAEGIGVLITDHNVRETLETTDRAYVIHRGQILREGSPAALISDPVVREVYLGDRFDEALVSRGVTAAEEEGL 801 AY+GRRVV+GVSF + GEIVGLLGPNGAGKTTSFRMTVGL PDAGEV L GREC RLPM++RAR GMGYLPQEPSIFRRMKVR N+LAVLEAMP+ R +R RADELL LDL H+ G+LA+TLSGGERRRLEIARALA++P IL+LDEPFAGVDP+AV+EIQ ++ +L+ +G+LITDHNVRETL +TDRAY+IH+G+ILREG+ A L+ DP VREVYLG FD V RGVTA EE GL Sbjct: 1 AYRGRRVVNGVSFHVDRGEIVGLLGPNGAGKTTSFRMTVGLTPPDAGEVLLEGRECSRLPMFKRARLGMGYLPQEPSIFRRMKVRHNLLAVLEAMPLARAQRHARADELLAELDLEHLAGNLADTLSGGERRRLEIARALATDPSILLLDEPFAGVDPIAVEEIQTLIGRLRQRNLGILITDHNVRETLHSTDRAYIIHQGRILREGTAAQLVEDPKVREVYLGHSFDTK-VRRGVTAEEERGL 243
BLAST of mRNA_M-pyrifera_M_contig81500.19070.1 vs. uniprot
Match: A0A2D5W7L9_9BACT (LPS export ABC transporter ATP-binding protein n=1 Tax=Planctomycetes bacterium TaxID=2026780 RepID=A0A2D5W7L9_9BACT) HSP 1 Score: 338 bits (868), Expect = 9.340e-115 Identity = 168/249 (67.47%), Postives = 201/249 (80.72%), Query Frame = 1 Query: 22 PAPASDPILDVRGLVKAYKGRRVVDGVSFQISAGEIVGLLGPNGAGKTTSFRMTVGLVTPDAGEVWLGGRECGRLPMYQRARNGMGYLPQEPSIFRRMKVRDNVLAVLEAMPMKRGEREDRADELLESLDLTHIVGSLAETLSGGERRRLEIARALASEPKILMLDEPFAGVDPLAVDEIQGILHQLKAEGIGVLITDHNVRETLETTDRAYVIHRGQILREGSPAALISDPVVREVYLGDRFDEALVS 768 P+ S+ +L+V GLVKA+ GRRVVDGV F + GEIVGLLGPNGAGKTTSFRMTVGL+ PD G+V L G+EC RLPMY+RAR GMGYLPQEPS+FRRM VR N+LAVLE + + R +R AD LLE L+L+H+ A+TLSGGERRRLE++RALA+ P +L+LDEPFAGVDP+ V EIQG++ Q++ GIGVLITDHNVRETLETTDRAY+IH GQILREGS A L+ D VR VYLG+ FD + S Sbjct: 2 PSTGSEHLLEVSGLVKAFDGRRVVDGVGFHVDQGEIVGLLGPNGAGKTTSFRMTVGLLHPDEGQVHLNGQECSRLPMYRRARVGMGYLPQEPSVFRRMTVRGNILAVLETLKLTRADRRREADRLLEELELSHLGKHRADTLSGGERRRLELSRALATRPSLLLLDEPFAGVDPINVQEIQGLISQMRQRGIGVLITDHNVRETLETTDRAYIIHAGQILREGSAAELVDDREVRRVYLGENFDRTVSS 250
BLAST of mRNA_M-pyrifera_M_contig81500.19070.1 vs. uniprot
Match: A0A518BFH1_9BACT (Lipopolysaccharide export system ATP-binding protein LptB n=1 Tax=Planctomycetes bacterium Pla133 TaxID=2528011 RepID=A0A518BFH1_9BACT) HSP 1 Score: 338 bits (866), Expect = 4.780e-114 Identity = 167/254 (65.75%), Postives = 207/254 (81.50%), Query Frame = 1 Query: 43 ILDVRGLVKAYKGRRVVDGVSFQISAGEIVGLLGPNGAGKTTSFRMTVGLVTPDAGEVWLGGRECGRLPMYQRARNGMGYLPQEPSIFRRMKVRDNVLAVLEAMPMKRGEREDRADELLESLDLTHIVGSLAETLSGGERRRLEIARALASEPKILMLDEPFAGVDPLAVDEIQGILHQLKAEGIGVLITDHNVRETLETTDRAYVIHRGQILREGSPAALISDPVVREVYLGDRFDEALVSRGVTAAEEEGLR 804 +L+VRGL K+Y+GR+VVDGVSF + GEIVGLLGPNGAGKTTSFRMTVGLV PD GEV+L GREC R PM++RAR GMGYLPQE S+FRR+ VRDN+LAVLE +P+ R +R RADELL+ +DL + GS+A+TLSGGERRRLEI RALA+ P +L+LDEPFAGVDP+AV+EIQGI+ QL+ GIGVLITDHNVRETL TDRAY+IH+G ILREG+ L++D V++VYLG F+ ++ G + ++ R Sbjct: 26 LLEVRGLEKSYRGRKVVDGVSFDVGPGEIVGLLGPNGAGKTTSFRMTVGLVRPDGGEVFLRGRECSRWPMFKRARLGMGYLPQEASVFRRLGVRDNLLAVLETLPLSRRDRRRRADELLQEMDLERLAGSMADTLSGGERRRLEICRALATNPALLLLDEPFAGVDPIAVEEIQGIVRQLRERGIGVLITDHNVRETLSCTDRAYIIHQGAILREGTADELVADERVKQVYLGHSFEVGVLG-GASGGRDQAPR 278
BLAST of mRNA_M-pyrifera_M_contig81500.19070.1 vs. uniprot
Match: A0A2D6HJP6_9BACT (LPS export ABC transporter ATP-binding protein n=1 Tax=Planctomycetes bacterium TaxID=2026780 RepID=A0A2D6HJP6_9BACT) HSP 1 Score: 337 bits (863), Expect = 9.040e-114 Identity = 168/253 (66.40%), Postives = 205/253 (81.03%), Query Frame = 1 Query: 43 ILDVRGLVKAYKGRRVVDGVSFQISAGEIVGLLGPNGAGKTTSFRMTVGLVTPDAGEVWLGGRECGRLPMYQRARNGMGYLPQEPSIFRRMKVRDNVLAVLEAMPMKRGEREDRADELLESLDLTHIVGSLAETLSGGERRRLEIARALASEPKILMLDEPFAGVDPLAVDEIQGILHQLKAEGIGVLITDHNVRETLETTDRAYVIHRGQILREGSPAALISDPVVREVYLGDRFDEALVSRGVTAAEEEGL 801 +L+V GLVKAY+GRRVVDGVSF++ EIVGLLGPNGAGK+TSFRMTVGL PDAG V L G +C RLPM++RAR GMGYLPQEPS+FRRM VRDN+LAVLE +P+ R +R ADEL+ L+L+H+ + A+TLSGGERRRLE++RALA+ P +L+LDEPFAGVDP+ V EIQGI+ L+ IG+LITDHNVRETL++TDRAY+IH G+ILREGS L++DP VREVYLG+ FD L V+ AEE L Sbjct: 13 LLEVEGLVKAYRGRRVVDGVSFRVGRHEIVGLLGPNGAGKSTSFRMTVGLTRPDAGAVRLMGVDCSRLPMFRRARLGMGYLPQEPSVFRRMSVRDNLLAVLETLPLSRAQRRKEADELMADLELSHLADNEAQTLSGGERRRLELSRALATRPSVLLLDEPFAGVDPINVQEIQGIVRDLRERDIGILITDHNVRETLQSTDRAYIIHEGRILREGSGVELVNDPRVREVYLGEHFDRPLEE--VSQAEEREL 263
BLAST of mRNA_M-pyrifera_M_contig81500.19070.1 vs. uniprot
Match: A0A518D3W2_9BACT (Lipopolysaccharide export system ATP-binding protein LptB n=1 Tax=Planctomycetes bacterium Pla163 TaxID=2528008 RepID=A0A518D3W2_9BACT) HSP 1 Score: 334 bits (857), Expect = 1.190e-112 Identity = 170/252 (67.46%), Postives = 206/252 (81.75%), Query Frame = 1 Query: 10 APSSPAPAS----DPILDVRGLVKAYKGRRVVDGVSFQISAGEIVGLLGPNGAGKTTSFRMTVGLVTPDAGEVWLGGRECGRLPMYQRARNGMGYLPQEPSIFRRMKVRDNVLAVLEAMPMKRGEREDRADELLESLDLTHIVGSLAETLSGGERRRLEIARALASEPKILMLDEPFAGVDPLAVDEIQGILHQLKAEGIGVLITDHNVRETLETTDRAYVIHRGQILREGSPAALISDPVVREVYLGDRFD 753 APS+ A AS D +L+ RGLVK+Y+GRRVVDGVSF + GEIVGLLGPNGAGKTTSFRM VGLV PD G+V+L G EC R+PM++RAR GMGYLPQE SIFRR+ VRDN+LAVLE +P+ R +R +RAD++L +DL + SLA+TLSGGERRRLEI+RALA +P IL+LDEPFAGVDP+AV+EIQ ++ L+ GIGVLITDHNVRETL +TDRAY+IH+G ILREG+ L+ DP VREVYLG F+ Sbjct: 28 APSARAVASGAGSDLLLEARGLVKSYRGRRVVDGVSFNVRPGEIVGLLGPNGAGKTTSFRMVVGLVRPDEGQVFLRGNECARMPMFRRARLGMGYLPQESSIFRRLGVRDNILAVLETLPLSRKQRHERADQILTEMDLLRLSKSLADTLSGGERRRLEISRALALDPAILLLDEPFAGVDPIAVEEIQRLVEGLRERGIGVLITDHNVRETLHSTDRAYIIHQGTILREGTADQLVKDPKVREVYLGHAFE 279
BLAST of mRNA_M-pyrifera_M_contig81500.19070.1 vs. uniprot
Match: A0A2E5X6M5_9BACT (LPS export ABC transporter ATP-binding protein n=1 Tax=Planctomycetes bacterium TaxID=2026780 RepID=A0A2E5X6M5_9BACT) HSP 1 Score: 333 bits (854), Expect = 1.260e-112 Identity = 164/249 (65.86%), Postives = 197/249 (79.12%), Query Frame = 1 Query: 22 PAPASDPILDVRGLVKAYKGRRVVDGVSFQISAGEIVGLLGPNGAGKTTSFRMTVGLVTPDAGEVWLGGRECGRLPMYQRARNGMGYLPQEPSIFRRMKVRDNVLAVLEAMPMKRGEREDRADELLESLDLTHIVGSLAETLSGGERRRLEIARALASEPKILMLDEPFAGVDPLAVDEIQGILHQLKAEGIGVLITDHNVRETLETTDRAYVIHRGQILREGSPAALISDPVVREVYLGDRFDEALVS 768 P+ + +L+V GLVKA+ GRRVVDGV F + GEIVGLLGPNGAGKTTSFRMTVGL+ PD G V L G EC RLPMY+RAR GMGYLPQEPS+FRRM V N+LAVLE + +KR ER A LLE L+L+H+ A+TLSGGERRRLE++RALA+ P +L+LDEPFAGVDP++V EIQG++ Q++ GIGVLITDHNVRETL+TTDRAY+IH G ILREGS L+ DP VR VYLG+ FD + + Sbjct: 2 PSHTPEHLLEVNGLVKAFDGRRVVDGVGFHVDRGEIVGLLGPNGAGKTTSFRMTVGLLHPDEGHVHLHGEECSRLPMYRRARLGMGYLPQEPSVFRRMTVLGNILAVLETLKLKRSERHAEAARLLEELELSHLADHRADTLSGGERRRLELSRALATRPSLLLLDEPFAGVDPISVQEIQGLIGQMRERGIGVLITDHNVRETLQTTDRAYIIHAGHILREGSATELVDDPEVRRVYLGENFDRTVAN 250 The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig81500.19070.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_M-pyrifera_M_contig81500.19070.1 >prot_M-pyrifera_M_contig81500.19070.1 ID=prot_M-pyrifera_M_contig81500.19070.1|Name=mRNA_M-pyrifera_M_contig81500.19070.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=269bp MSDAPSSPAPASDPILDVRGLVKAYKGRRVVDGVSFQISAGEIVGLLGPNback to top mRNA from alignment at M-pyrifera_M_contig81500:107..913- Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_M-pyrifera_M_contig81500.19070.1 ID=mRNA_M-pyrifera_M_contig81500.19070.1|Name=mRNA_M-pyrifera_M_contig81500.19070.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=807bp|location=Sequence derived from alignment at M-pyrifera_M_contig81500:107..913- (Macrocystis pyrifera P11B4 male)back to top Coding sequence (CDS) from alignment at M-pyrifera_M_contig81500:107..913- >mRNA_M-pyrifera_M_contig81500.19070.1 ID=mRNA_M-pyrifera_M_contig81500.19070.1|Name=mRNA_M-pyrifera_M_contig81500.19070.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=1614bp|location=Sequence derived from alignment at M-pyrifera_M_contig81500:107..913- (Macrocystis pyrifera P11B4 male)back to top |