mRNA_M-pyrifera_M_contig81487.19064.1 (mRNA) Macrocystis pyrifera P11B4 male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_M-pyrifera_M_contig81487.19064.1
Unique NamemRNA_M-pyrifera_M_contig81487.19064.1
TypemRNA
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Homology
BLAST of mRNA_M-pyrifera_M_contig81487.19064.1 vs. uniprot
Match: A0A518A5N0_9PLAN (Arylsulfatase n=8 Tax=Gimesia TaxID=1649453 RepID=A0A518A5N0_9PLAN)

HSP 1 Score: 275 bits (704), Expect = 1.640e-88
Identity = 133/143 (93.01%), Postives = 138/143 (96.50%), Query Frame = 1
Query:    1 KTPPQMDGQSFLELAAGKLPAADWRKNILYEYYWEFNFPQTPTTFALRTPRYKFIQYHGIWDIDELYDMEKDPLEQHNLIFDPEYQKQIRKMRADLHAILEKSEANRVPFSHKRSMGANLRLESGSKPADFNDKLLREKNAKE 429
            KTP QMDGQSFLELAAGKLPAADWR+NILYEYYWEFNFPQTPTTFALRTPRYKFIQYHGIWDIDELYDMEKDPLEQHNLIFDP+YQKQI+ MRADLHAILEKS ANRVPFSHKRSMGANLR  SGSKPA+FNDKL+REKNAKE
Sbjct:  371 KTPSQMDGQSFLELAAGKLPAADWRQNILYEYYWEFNFPQTPTTFALRTPRYKFIQYHGIWDIDELYDMEKDPLEQHNLIFDPKYQKQIKTMRADLHAILEKSNANRVPFSHKRSMGANLRRSSGSKPAEFNDKLMREKNAKE 513          
BLAST of mRNA_M-pyrifera_M_contig81487.19064.1 vs. uniprot
Match: A0A517V8X7_9PLAN (Arylsulfatase n=8 Tax=Planctomycetaceae TaxID=126 RepID=A0A517V8X7_9PLAN)

HSP 1 Score: 261 bits (666), Expect = 8.310e-83
Identity = 123/142 (86.62%), Postives = 137/142 (96.48%), Query Frame = 1
Query:    1 KTPPQMDGQSFLELAAGKLPAADWRKNILYEYYWEFNFPQTPTTFALRTPRYKFIQYHGIWDIDELYDMEKDPLEQHNLIFDPEYQKQIRKMRADLHAILEKSEANRVPFSHKRSMGANLRLESGSKPADFNDKLLREKNAK 426
            KTPPQMDGQSFL+LAAGK+PA DWR+NILYEYYWE+NFPQTPTTFALRTPRYKFIQYHGIWDIDELYDMEKDP E+HNLIFD + QK+I+KMRADLHAILEK++A+RVPFSHKR MGANLRL+SGSKPADFNDKL+REK+AK
Sbjct:  371 KTPPQMDGQSFLQLAAGKIPAKDWRQNILYEYYWEYNFPQTPTTFALRTPRYKFIQYHGIWDIDELYDMEKDPHEEHNLIFDKDQQKRIQKMRADLHAILEKADADRVPFSHKRRMGANLRLKSGSKPADFNDKLMREKDAK 512          
BLAST of mRNA_M-pyrifera_M_contig81487.19064.1 vs. uniprot
Match: A0A517REQ1_9PLAN (Arylsulfatase n=2 Tax=Gimesia TaxID=1649453 RepID=A0A517REQ1_9PLAN)

HSP 1 Score: 241 bits (614), Expect = 5.090e-75
Identity = 112/143 (78.32%), Postives = 133/143 (93.01%), Query Frame = 1
Query:    1 KTPPQMDGQSFLELAAGKLPAADWRKNILYEYYWEFNFPQTPTTFALRTPRYKFIQYHGIWDIDELYDMEKDPLEQHNLIFDPEYQKQIRKMRADLHAILEKSEANRVPFSHKRSMGANLRLESGSKPADFNDKLLREKNAKE 429
            +TP QMDGQSFL+LAAG +PA+ WR+N LYEYYWE+NFPQTPTTFALRTPRYKFIQYHGIWD+DELYDM++DP E+HNLIF+ E+QK+I+KMRADLHAILEKS+ANRVPFSHKR MGANLRL++GS+PA F  +L+R+KNAKE
Sbjct:  371 QTPSQMDGQSFLQLAAGNMPASQWRQNSLYEYYWEYNFPQTPTTFALRTPRYKFIQYHGIWDLDELYDMQEDPHEEHNLIFEKEHQKRIQKMRADLHAILEKSDANRVPFSHKRRMGANLRLKNGSEPAQFPHQLMRDKNAKE 513          
BLAST of mRNA_M-pyrifera_M_contig81487.19064.1 vs. uniprot
Match: A0A1P8WSK2_9PLAN (Arylsulfatase n=1 Tax=Fuerstiella marisgermanici TaxID=1891926 RepID=A0A1P8WSK2_9PLAN)

HSP 1 Score: 229 bits (585), Expect = 1.170e-70
Identity = 108/143 (75.52%), Postives = 127/143 (88.81%), Query Frame = 1
Query:    1 KTPPQMDGQSFLELAAGKLPAADWRKNILYEYYWEFNFPQTPTTFALRTPRYKFIQYHGIWDIDELYDMEKDPLEQHNLIFDPEYQKQIRKMRADLHAILEKSEANRVPFSHKRSMGANLRLESGSKPADFNDKLLREKNAKE 429
            KTP QMDGQSFL+LAAGK  A DWR+N+LYEYYWE+NFPQTPTTFALRTP YKFIQYHG+WD+DELYDM+ DP E+HNLIF+ + Q +IRKMRADLH IL +S+A RVPFSHKRSMG+NLRL+SGS+PADF  +LLR +NAK+
Sbjct:  374 KTPDQMDGQSFLQLAAGKTKAVDWRQNLLYEYYWEYNFPQTPTTFALRTPEYKFIQYHGVWDLDELYDMKNDPHEEHNLIFNDDQQPRIRKMRADLHKILAESDAARVPFSHKRSMGSNLRLKSGSEPADFPPQLLRNQNAKD 516          
BLAST of mRNA_M-pyrifera_M_contig81487.19064.1 vs. uniprot
Match: A0A517VRL2_9PLAN (Arylsulfatase n=1 Tax=Gimesia aquarii TaxID=2527964 RepID=A0A517VRL2_9PLAN)

HSP 1 Score: 226 bits (576), Expect = 2.630e-69
Identity = 110/143 (76.92%), Postives = 125/143 (87.41%), Query Frame = 1
Query:    1 KTPPQMDGQSFLELAAGKLPAADWRKNILYEYYWEFNFPQTPTTFALRTPRYKFIQYHGIWDIDELYDMEKDPLEQHNLIFDPEYQKQIRKMRADLHAILEKSEANRVPFSHKRSMGANLRLESGSKPADFNDKLLREKNAKE 429
            KT  QMDGQSFL+LAAG +  + WRKNILYEYYWE+NFP TPTTF+LRT RYKFIQYHGIWDIDELYDM+ DP E+HNLIF+ E+Q+ I+KMRADLH IL K++ANRVPFSHKR MGANLRL+SGSKPA F  +LLREKNAKE
Sbjct:  375 KTASQMDGQSFLQLAAGSMQPSKWRKNILYEYYWEYNFPHTPTTFSLRTDRYKFIQYHGIWDIDELYDMKNDPHEKHNLIFEKEHQQLIKKMRADLHQILIKADANRVPFSHKRRMGANLRLKSGSKPAIFPPQLLREKNAKE 517          
BLAST of mRNA_M-pyrifera_M_contig81487.19064.1 vs. uniprot
Match: A0A2D6SZ67_9PLAN (Acetylglucosamine-6-sulfatase n=1 Tax=Planctomycetaceae bacterium TaxID=2026779 RepID=A0A2D6SZ67_9PLAN)

HSP 1 Score: 221 bits (564), Expect = 1.470e-67
Identity = 105/143 (73.43%), Postives = 122/143 (85.31%), Query Frame = 1
Query:    1 KTPPQMDGQSFLELAAGKLPAADWRKNILYEYYWEFNFPQTPTTFALRTPRYKFIQYHGIWDIDELYDMEKDPLEQHNLIFDPEYQKQIRKMRADLHAILEKSEANRVPFSHKRSMGANLRLESGSKPADFNDKLLREKNAKE 429
            +TP  MDG+SFL+LAAGK     WR+N+LYEYYWEF+FPQTPTTFALRT RYKFIQYHGIWD+DELYDM+ DP E+HNLIFDPE+ K++R+MR DLH IL K++ANRVPFSHKRSMGANLRL +GSKPA F  +LLR KN  E
Sbjct:  371 ETPTSMDGESFLDLAAGKTKPDQWRQNMLYEYYWEFSFPQTPTTFALRTQRYKFIQYHGIWDVDELYDMQADPHERHNLIFDPEHAKRVRQMRTDLHDILVKADANRVPFSHKRSMGANLRLRNGSKPAKFPPELLRNKNRDE 513          
BLAST of mRNA_M-pyrifera_M_contig81487.19064.1 vs. uniprot
Match: A0A5C6BS41_9PLAN (Arylsulfatase n=3 Tax=Symmachiella TaxID=2795780 RepID=A0A5C6BS41_9PLAN)

HSP 1 Score: 221 bits (564), Expect = 1.500e-67
Identity = 106/143 (74.13%), Postives = 121/143 (84.62%), Query Frame = 1
Query:    1 KTPPQMDGQSFLELAAGKLPAADWRKNILYEYYWEFNFPQTPTTFALRTPRYKFIQYHGIWDIDELYDMEKDPLEQHNLIFDPEYQKQIRKMRADLHAILEKSEANRVPFSHKRSMGANLRLESGSKPADFNDKLLREKNAKE 429
            K P  MDGQSFL+LAAGK  AA WRKN+LYEYYWE+NFPQTPTTFALR+ RYKFIQYHGIWDIDELYD++ DPLEQHNLIFDP  QK+I++MR++LH IL K++ANRVPFSHKR MG NLR  SGS PA F  +LLR  NAK+
Sbjct:  372 KPPANMDGQSFLDLAAGKEDAAQWRKNLLYEYYWEYNFPQTPTTFALRSQRYKFIQYHGIWDIDELYDLQTDPLEQHNLIFDPAQQKRIKQMRSELHEILVKADANRVPFSHKRRMGQNLRRRSGSSPAKFPPQLLRNSNAKD 514          
BLAST of mRNA_M-pyrifera_M_contig81487.19064.1 vs. uniprot
Match: A0A2G2L6L8_9BACT (Acetylglucosamine-6-sulfatase n=1 Tax=Blastopirellula sp. TaxID=2024826 RepID=A0A2G2L6L8_9BACT)

HSP 1 Score: 207 bits (527), Expect = 4.650e-62
Identity = 97/139 (69.78%), Postives = 119/139 (85.61%), Query Frame = 1
Query:    4 TPPQMDGQSFLELAAGKLPAADWRKNILYEYYWEFNFPQTPTTFALRTPRYKFIQYHGIWDIDELYDMEKDPLEQHNLIFDPEYQKQIRKMRADLHAILEKSEANRVPFSHKRSMGANLRLESGSKPADFNDKLLREKN 420
            TP  MDG SF++LAAGK+   DWRKNILYEYYWE++FPQTPTT ALRT RYKFIQYHGIWDIDELYD+++DP EQHNLIFDP+++K++  MR DLH IL +++AN VPFS KR+MGANLRL+SGSKPA +  +L+R K+
Sbjct:  372 TPEHMDGSSFVDLAAGKMKPEDWRKNILYEYYWEYSFPQTPTTLALRTQRYKFIQYHGIWDIDELYDLQEDPDEQHNLIFDPKHKKRVATMRTDLHNILVEADANNVPFSLKRTMGANLRLKSGSKPAVYPPELMRNKD 510          
BLAST of mRNA_M-pyrifera_M_contig81487.19064.1 vs. uniprot
Match: UPI001CCFE7D7 (sulfatase n=1 Tax=Bremerella volcania TaxID=2527984 RepID=UPI001CCFE7D7)

HSP 1 Score: 176 bits (445), Expect = 5.090e-50
Identity = 84/140 (60.00%), Postives = 104/140 (74.29%), Query Frame = 1
Query:    4 TPPQMDGQSFLELAAGKLPAADWRKNILYEYYWEFNFPQTPTTFALRTPRYKFIQYHGIWDIDELYDMEKDPLEQHNLIFDPEYQKQIRKMRADLHAILEKSEANRVPFSHKRSMGANLRLESGSKPADFNDKLLREKNA 423
            TP QMDG+SF+++A G +P  DWRK++LYEYYWE+NFP TPT FALR  RYKFIQYHGIWD DELYD+E DP E HNLI DP  Q  +R MR  ++  L++  A +VPF  KR  GANLR E+GS  A+F + ++RE NA
Sbjct:  364 TPEQMDGRSFVKIAKGTMPVKDWRKHLLYEYYWEWNFPHTPTMFALRGDRYKFIQYHGIWDTDELYDLENDPHEMHNLINDPGLQSTVRDMRNAINQELKERGAMQVPFGMKRGSGANLRREAGSHAAEFPEDIIRENNA 503          
BLAST of mRNA_M-pyrifera_M_contig81487.19064.1 vs. uniprot
Match: A0A518C905_9BACT (Arylsulfatase n=2 Tax=Pirellulaceae TaxID=2691357 RepID=A0A518C905_9BACT)

HSP 1 Score: 175 bits (443), Expect = 1.170e-49
Identity = 88/143 (61.54%), Postives = 105/143 (73.43%), Query Frame = 1
Query:    1 KTPPQMDGQSFLELAAGKLPAADWRKNILYEYYWEFNFPQTPTTFALRTPRYKFIQYHGIWDIDELYDMEKDPLEQHNLIFDPEYQKQIRKMRADLHAILEKSEANRVPFSHKRSMGANLRLESGSKPADFNDKLLREKNAKE 429
            +TP QMDG SFL +A+GK+   DWRK++LYEY WE+NFPQTPT FALR  RYKFIQYHGIWD DELYD+E DP E  NLI +   Q  +R MR  L+  L++  A +VPF  KR  GANLRLESGSK A F D +LREK+ K+
Sbjct:  372 ETPEQMDGMSFLRIASGKMDTKDWRKHLLYEYNWEWNFPQTPTMFALRGERYKFIQYHGIWDTDELYDLENDPHEMKNLIHESGLQSTVRDMRNALNQELKQRGAMQVPFGAKRGPGANLRLESGSKAAPFPDTVLREKDGKQ 514          
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig81487.19064.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A518A5N0_9PLAN1.640e-8893.01Arylsulfatase n=8 Tax=Gimesia TaxID=1649453 RepID=... [more]
A0A517V8X7_9PLAN8.310e-8386.62Arylsulfatase n=8 Tax=Planctomycetaceae TaxID=126 ... [more]
A0A517REQ1_9PLAN5.090e-7578.32Arylsulfatase n=2 Tax=Gimesia TaxID=1649453 RepID=... [more]
A0A1P8WSK2_9PLAN1.170e-7075.52Arylsulfatase n=1 Tax=Fuerstiella marisgermanici T... [more]
A0A517VRL2_9PLAN2.630e-6976.92Arylsulfatase n=1 Tax=Gimesia aquarii TaxID=252796... [more]
A0A2D6SZ67_9PLAN1.470e-6773.43Acetylglucosamine-6-sulfatase n=1 Tax=Planctomycet... [more]
A0A5C6BS41_9PLAN1.500e-6774.13Arylsulfatase n=3 Tax=Symmachiella TaxID=2795780 R... [more]
A0A2G2L6L8_9BACT4.650e-6269.78Acetylglucosamine-6-sulfatase n=1 Tax=Blastopirell... [more]
UPI001CCFE7D75.090e-5060.00sulfatase n=1 Tax=Bremerella volcania TaxID=252798... [more]
A0A518C905_9BACT1.170e-4961.54Arylsulfatase n=2 Tax=Pirellulaceae TaxID=2691357 ... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig81487contigM-pyrifera_M_contig81487:2..433 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-19
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Properties
Property NameValue
Taxonomic scopeBacteria
Seed ortholog score252.3
Seed ortholog evalue1.3e-64
Seed eggNOG ortholog344747.PM8797T_00067
Preferred namemdsA
KEGG koko:K01137
KEGG ReactionR07808,R07819
KEGG Pathwayko00531,ko01100,ko04142,map00531,map01100,map04142
KEGG ModuleM00078,M00079
Hectar predicted targeting categoryother localisation
EggNOG free text desc.COG3119 Arylsulfatase A and related enzymes
EggNOG OGs2IXMP@203682,COG3119@1,COG3119@2
EC3.1.6.14
COG Functional cat.P
Best tax levelPlanctomycetes
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko00002,ko01000
Exons1
Model size432
Cds size417
Stop1
Start1
Relationships

The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622816721.440473-UTR-M-pyrifera_M_contig81487:1..161622816721.440473-UTR-M-pyrifera_M_contig81487:1..16Macrocystis pyrifera P11B4 maleUTRM-pyrifera_M_contig81487 2..16 +
1692278139.963432-UTR-M-pyrifera_M_contig81487:1..161692278139.963432-UTR-M-pyrifera_M_contig81487:1..16Macrocystis pyrifera P11B4 maleUTRM-pyrifera_M_contig81487 2..16 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622816721.4544725-CDS-M-pyrifera_M_contig81487:16..4331622816721.4544725-CDS-M-pyrifera_M_contig81487:16..433Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig81487 17..433 +
1692278139.9764752-CDS-M-pyrifera_M_contig81487:16..4331692278139.9764752-CDS-M-pyrifera_M_contig81487:16..433Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig81487 17..433 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig81487.19064.1prot_M-pyrifera_M_contig81487.19064.1Macrocystis pyrifera P11B4 malepolypeptideM-pyrifera_M_contig81487 17..433 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_M-pyrifera_M_contig81487.19064.1

>prot_M-pyrifera_M_contig81487.19064.1 ID=prot_M-pyrifera_M_contig81487.19064.1|Name=mRNA_M-pyrifera_M_contig81487.19064.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=139bp
MDGQSFLELAAGKLPAADWRKNILYEYYWEFNFPQTPTTFALRTPRYKFI
QYHGIWDIDELYDMEKDPLEQHNLIFDPEYQKQIRKMRADLHAILEKSEA
NRVPFSHKRSMGANLRLESGSKPADFNDKLLREKNAKE*
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mRNA from alignment at M-pyrifera_M_contig81487:2..433+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_M-pyrifera_M_contig81487.19064.1 ID=mRNA_M-pyrifera_M_contig81487.19064.1|Name=mRNA_M-pyrifera_M_contig81487.19064.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=432bp|location=Sequence derived from alignment at M-pyrifera_M_contig81487:2..433+ (Macrocystis pyrifera P11B4 male)
AAAACACCGCCTCAGATGGATGGTCAAAGTTTCCTGGAACTGGCAGCAGG GAAATTACCGGCAGCCGATTGGAGGAAGAATATTCTCTATGAATATTACT GGGAATTCAATTTCCCTCAGACGCCAACGACCTTCGCACTGCGGACACCA CGTTATAAATTCATCCAATATCATGGTATCTGGGATATTGACGAACTTTA CGACATGGAGAAAGATCCATTGGAACAGCACAATCTGATTTTTGATCCTG AATATCAGAAGCAGATCAGAAAGATGCGGGCCGATCTGCATGCGATCCTG GAGAAGTCAGAGGCGAACCGAGTTCCCTTCAGTCACAAACGGAGCATGGG AGCTAACCTGCGGCTTGAGAGTGGATCAAAGCCGGCTGATTTCAACGATA AGCTGTTGCGGGAGAAAAATGCTAAAGAGTAG
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Coding sequence (CDS) from alignment at M-pyrifera_M_contig81487:2..433+

>mRNA_M-pyrifera_M_contig81487.19064.1 ID=mRNA_M-pyrifera_M_contig81487.19064.1|Name=mRNA_M-pyrifera_M_contig81487.19064.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=834bp|location=Sequence derived from alignment at M-pyrifera_M_contig81487:2..433+ (Macrocystis pyrifera P11B4 male)
ATGGATGGTCAAAGTTTCCTGGAACTGGCAGCAGGGAAATTACCGGCAGC
CGATTGGAGGAAGAATATTCTCTATGAATATTACTGGGAATTCAATTTCC
CTCAGACGCCAACGACCTTCGCACTGCGGACACCACGTTATAAATTCATC
CAATATCATGGTATCTGGGATATTGACGAACTTTACGACATGGAGAAAGA
TCCATTGGAACAGCACAATCTGATTTTTGATCCTGAATATCAGAAGCAGA
TCAGAAAGATGCGGGCCGATCTGCATGCGATCCTGGAGAAGTCAGAGGCG
AACCGAGTTCCCTTCAGTCACAAACGGAGCATGGGAGCTAACCTGCGGCT
TGAGAGTGGATCAAAGCCGGCTGATTTCAACGATAAGCTGTTGCGGGAGA
AAAATGCTAAAGAGTAGATGGATGGTCAAAGTTTCCTGGAACTGGCAGCA
GGGAAATTACCGGCAGCCGATTGGAGGAAGAATATTCTCTATGAATATTA
CTGGGAATTCAATTTCCCTCAGACGCCAACGACCTTCGCACTGCGGACAC
CACGTTATAAATTCATCCAATATCATGGTATCTGGGATATTGACGAACTT
TACGACATGGAGAAAGATCCATTGGAACAGCACAATCTGATTTTTGATCC
TGAATATCAGAAGCAGATCAGAAAGATGCGGGCCGATCTGCATGCGATCC
TGGAGAAGTCAGAGGCGAACCGAGTTCCCTTCAGTCACAAACGGAGCATG
GGAGCTAACCTGCGGCTTGAGAGTGGATCAAAGCCGGCTGATTTCAACGA
TAAGCTGTTGCGGGAGAAAAATGCTAAAGAGTAG
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