|
|
Homology
BLAST of mRNA_M-pyrifera_M_contig8148.19061.1 vs. uniprot
Match: A0A6H5KZU7_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KZU7_9PHAE) HSP 1 Score: 238 bits (608), Expect = 1.670e-65 Identity = 241/556 (43.35%), Postives = 285/556 (51.26%), Query Frame = 1
Query: 1 LALAALVVWFREFLTVLDDGAVGGEGEGSWGSPPSRLLRVIDQRVGCAQEAVQLFVALCRGLGLRTRYVSCLDPLPPFP-----RSLRPTKQTRNNTVDLVAA-----EGRKG---RHRQ-------SGG--QAAATLG--GSQAWAEVLCQGDRESLVRRSGRVVTGASRYAGQPPXXXXXLAAQPRPLKRHRTE------------LPKSLSGSGGGSSAEPVFGVDASVRDGDDGXXXXXXXXXXXXXDXXXXXXXXVGRR------------------------AGGETKPTAFEEQKDATEERQAAAPKAEVGAGAEXXXXXXXXXXVETARAPAEKQPPRKTPRKKGKVSAVSAGDDKAKAALPQATAAPQRKTDSITTLTMARRRSPRGRPPREQSAEIPAASNISNGXXXXXXXXXXXIESKMEVCLGGGAAETEAETGAEPGEREGRAAGVDGAGSVATSAGARERWVHVDPVLGAADQPEKVQGLRFRKQLMPYVVAEDERRAIVDVTRRYSSQWSRTLRTRGRAMASQDGWWNLALRQWGASSVR 1488
L LA LVVWFREF+TVLDDGAVGG EGSWGS P RLLRVI+Q+ GCAQEAVQLFV+LCRGLGLR RYV+CLDP+PP P R P+KQTRN TV+L AA EG++G HRQ SGG QAA +G SQAWAEVLC+ +E + S R XXX + RP KR RT PK +G GG XXXXXXXXXXXXX XXXXXXXX +G +PT +++AT AA G+ A A T K +V+ G+ + A+P TA P T T+ E +A +++G XXXXXXXXXX AGV S T G RERW+HVDPV+GA DQ +KVQ LRFRK+LMPYVVAEDE++ IVDVTRRYSS+W+RTLRTRGRAMAS DGWWN ++R+WGAS+ R
Sbjct: 241 LRLADLVVWFREFITVLDDGAVGGS-EGSWGSRPQRLLRVIEQQAGCAQEAVQLFVSLCRGLGLRARYVACLDPVPPSPAAGLRRQPPPSKQTRNYTVNLAAAPAVLAEGKQGVRHHHRQRRWGSGESGGGLQAAGGVGVGSSQAWAEVLCREGKELELSPSRRPXXXXXXXXXX--XXXAPATSPRRPSKRQRTRGTPEACLPPRDSRPKGSAGMPGGGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTSEKVDXXXXXXXXXXXXTLSGARARPTRAGSKRNATGAIAAAETCTRPSNGSRRELPRSREAASSAAGASG-------TAHKTKRVAGAPKGEG-FRDAVPCNTAYPTGGTGGGTSADDG-----------EATANGARGVGVADGGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX---------XXAGVSSCPS--TRGGDRERWIHVDPVVGALDQADKVQELRFRKRLMPYVVAEDEKKLIVDVTRRYSSEWARTLRTRGRAMASADGWWNRSMRKWGASADR 763
BLAST of mRNA_M-pyrifera_M_contig8148.19061.1 vs. uniprot
Match: D8LJY2_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LJY2_ECTSI) HSP 1 Score: 215 bits (548), Expect = 1.940e-57 Identity = 227/561 (40.46%), Postives = 267/561 (47.59%), Query Frame = 1
Query: 1 LALAALVVWFREFLTVLDDGAVGGEGEGSWGSPPSRLLRVIDQRVGCAQEAVQLFVALCRGLGLRTRYVSCLDPLPPFPRS-LR--------------------PTKQTRNNTVDLVAAEGRKGRHRQSGGQAAAT---LGGSQAWAEVLCQGDRESLVRRSGRVVTGASRYAGQPPXXXXXLAAQPRPLKRHRTE------LPKSLSGSGGGSSAEPVFGVDASVRDGDDGXXXXXXXXXXXXXDXXXXXXXXVGRRAGGETKPTAFEEQKDATEERQAAAPKAEVGAGAEXXXXXXXXXXVETARAPAEKQPPRKTPRKKGKVSAVSAGDDKAKAALPQATAAPQRKTDSITTLTMARRRSPRGRPPREQSAEIPAASNISN--GXXXXXXXXXXXIESKMEVCLGGGAAETEAETG-AEPGEREGRAAGVDGAGSV--------------------------------ATSAGARERWVHVDPVLGAADQPEKVQGLRFRKQLMPYVVAEDERRAIVDVTRRYSSQWSRTLRTRGRAMASQDGWWNLALRQWGASSVR 1488
L LA LVVWFREF+TVL+D AVGG EGSWGS P RL RVI+QR GCAQEAVQLFV+LCRGLGLR RYV+CLDP+PP P + LR G GG AA G SQAWAEVLC+ +E V V SR XXXXX RP KR RT LP S SS+ P XXXXXXXXXXXXX XXXXXX R+ GE + Q A+E+ P E A A V ARA +P R AG + A + A R ++ +RR+ PR +A A+ ++ + GG T A+ G A G + G G GS +T GARERW+HVDPV+GA DQ +KVQ LRFRK+LMPYVVAEDE++ IVDVTRRYSS+W+RTLRTRGRAMAS DGWWN +LR+WGAS+ R
Sbjct: 197 LRLADLVVWFREFITVLNDDAVGGS-EGSWGSRPQRLQRVIEQRAGCAQEAVQLFVSLCRGLGLRARYVACLDPVPPSPAADLRRQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGSGESRGGLQAAGGVGAGSSQAWAEVLCREGKELHVLTEKEV--SPSRRPXXXXXXXXXXXXPRRPSKRQRTRGTPEACLPPRDSRPKV-SSSMPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGHGARQLAGEQR-----RQNRASEKMDVDPPPGESTATA----------TVSGARA----RPTR-------------AGSKRKAAGVTAAAETCTRPSNG------SRRKLPRSPEAASSAAGASGAAQKTDREAGAPKGEGFRDAVPCNAAYPTGGRGGGTAADDGEATANGARGASGGHGGGGSKKXXXXXXXXXXXXXXXXXXXXXXXXXXVSSTPSTRGGARERWIHVDPVVGALDQADKVQDLRFRKRLMPYVVAEDEKKLIVDVTRRYSSEWARTLRTRGRAMASADGWWNRSLRKWGASAHR 715
BLAST of mRNA_M-pyrifera_M_contig8148.19061.1 vs. uniprot
Match: A0A1Y1I3Q9_KLENI (Transglutaminase-like n=1 Tax=Klebsormidium nitens TaxID=105231 RepID=A0A1Y1I3Q9_KLENI) HSP 1 Score: 64.7 bits (156), Expect = 3.110e-7 Identity = 40/86 (46.51%), Postives = 47/86 (54.65%), Query Frame = 1
Query: 7 LAALVVWFREFLTVLDDGAVGGEGEG----SWGSPPSRLLRVIDQRVGCAQEAVQLFVALCRGLGLRTRYVSCLD--PLPPFPRSL 246
LA LV WF+E + + EG W S RL RV++ +VG +E LFVALCR LGL TRYVS LD PL P SL
Sbjct: 349 LAPLVEWFQERFRISEGAERKNGNEGVELSGWESDAERLQRVLELKVGTTEELTALFVALCRSLGLTTRYVSVLDVTPLKPDAASL 434
BLAST of mRNA_M-pyrifera_M_contig8148.19061.1 vs. uniprot
Match: A0A3M6VNL8_9STRA (Uncharacterized protein n=2 Tax=Peronospora effusa TaxID=542832 RepID=A0A3M6VNL8_9STRA) HSP 1 Score: 60.1 bits (144), Expect = 6.920e-6 Identity = 30/82 (36.59%), Postives = 46/82 (56.10%), Query Frame = 1
Query: 1240 ERWVHVDPVLGAADQPEKVQGLRFRKQLMPYVVAEDERRAIVDVTRRYSSQWSRTLRTRGRAMASQDGWWNLALRQWGASSV 1485
+RW+HVD V D+P++V+ LR R YV++ + +VDVT RY+ QWS++L R D WW L ++ +V
Sbjct: 312 QRWIHVDVVRRLVDRPQEVEKLRGRSARFSYVISIQDDELLVDVTSRYTVQWSKSLTLR-----LADSWWKQVLERFNEDTV 388
The following BLAST results are available for this feature:
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
| Property Name | Value |
|---|
| Taxonomic scope | Eukaryota |
| Seed ortholog score | 226.5 |
| Seed ortholog evalue | 2.8e-56 |
| Seed eggNOG ortholog | 2880.D8LJY2 |
| Preferred name | RAD4 |
| KEGG ko | ko:K10838 |
| KEGG Pathway | ko03420,map03420 |
| Hectar predicted targeting category | other localisation |
| GOs | GO:0000109,GO:0000111,GO:0000217,GO:0000404,GO:0000405,GO:0000715,GO:0003674,GO:0003676,GO:0003677,GO:0003684,GO:0003690,GO:0003697,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005654,GO:0005730,GO:0005737,GO:0005739,GO:0005886,GO:0006139,GO:0006259,GO:0006281,GO:0006289,GO:0006294,GO:0006298,GO:0006725,GO:0006807,GO:0006950,GO:0006974,GO:0006996,GO:0007346,GO:0008150,GO:0008152,GO:0009314,GO:0009411,GO:0009416,GO:0009507,GO:0009536,GO:0009628,GO:0009987,GO:0010564,GO:0016020,GO:0016043,GO:0022607,GO:0030983,GO:0031974,GO:0031981,GO:0032135,GO:0032991,GO:0033554,GO:0034622,GO:0034641,GO:0034644,GO:0043170,GO:0043226,GO:0043227,GO:0043228,GO:0043229,GO:0043231,GO:0043232,GO:0043233,GO:0043933,GO:0044085,GO:0044237,GO:0044238,GO:0044260,GO:0044422,GO:0044424,GO:0044428,GO:0044444,GO:0044446,GO:0044464,GO:0046483,GO:0050789,GO:0050794,GO:0050896,GO:0051276,GO:0051716,GO:0051726,GO:0065003,GO:0065004,GO:0065007,GO:0070013,GO:0070911,GO:0070914,GO:0071214,GO:0071478,GO:0071482,GO:0071704,GO:0071824,GO:0071840,GO:0071942,GO:0071944,GO:0090304,GO:0097159,GO:0104004,GO:1901360,GO:1901363,GO:1901987,GO:1901990,GO:1990391 |
| EggNOG free text desc. | mismatch repair |
| EggNOG OGs | COG5535@1,KOG2179@2759 |
| COG Functional cat. | L |
| Best tax level | Eukaryota |
| Best eggNOG OG | NA|NA|NA |
| BRITE | ko00000,ko00001,ko03400 |
| Exons | 6 |
| Model size | 1488 |
| Cds size | 1488 |
| Stop | 0 |
| Start | 0 |
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type | Position |
|---|
| 1622816721.2662795-CDS-M-pyrifera_M_contig8148:1328..1437 | 1622816721.2662795-CDS-M-pyrifera_M_contig8148:1328..1437 | Macrocystis pyrifera P11B4 male | CDS | M-pyrifera_M_contig8148 1329..1437 - |
| 1692278139.84295-CDS-M-pyrifera_M_contig8148:1328..1437 | 1692278139.84295-CDS-M-pyrifera_M_contig8148:1328..1437 | Macrocystis pyrifera P11B4 male | CDS | M-pyrifera_M_contig8148 1329..1437 - |
| 1622816721.278112-CDS-M-pyrifera_M_contig8148:3759..3845 | 1622816721.278112-CDS-M-pyrifera_M_contig8148:3759..3845 | Macrocystis pyrifera P11B4 male | CDS | M-pyrifera_M_contig8148 3760..3845 - |
| 1692278139.857661-CDS-M-pyrifera_M_contig8148:3759..3845 | 1692278139.857661-CDS-M-pyrifera_M_contig8148:3759..3845 | Macrocystis pyrifera P11B4 male | CDS | M-pyrifera_M_contig8148 3760..3845 - |
| 1622816721.289785-CDS-M-pyrifera_M_contig8148:8120..8844 | 1622816721.289785-CDS-M-pyrifera_M_contig8148:8120..8844 | Macrocystis pyrifera P11B4 male | CDS | M-pyrifera_M_contig8148 8121..8844 - |
| 1692278139.8718991-CDS-M-pyrifera_M_contig8148:8120..8844 | 1692278139.8718991-CDS-M-pyrifera_M_contig8148:8120..8844 | Macrocystis pyrifera P11B4 male | CDS | M-pyrifera_M_contig8148 8121..8844 - |
| 1622816721.30359-CDS-M-pyrifera_M_contig8148:8901..9053 | 1622816721.30359-CDS-M-pyrifera_M_contig8148:8901..9053 | Macrocystis pyrifera P11B4 male | CDS | M-pyrifera_M_contig8148 8902..9053 - |
| 1692278139.882108-CDS-M-pyrifera_M_contig8148:8901..9053 | 1692278139.882108-CDS-M-pyrifera_M_contig8148:8901..9053 | Macrocystis pyrifera P11B4 male | CDS | M-pyrifera_M_contig8148 8902..9053 - |
| 1622816721.3177612-CDS-M-pyrifera_M_contig8148:9973..10228 | 1622816721.3177612-CDS-M-pyrifera_M_contig8148:9973..10228 | Macrocystis pyrifera P11B4 male | CDS | M-pyrifera_M_contig8148 9974..10228 - |
| 1692278139.8930678-CDS-M-pyrifera_M_contig8148:9973..10228 | 1692278139.8930678-CDS-M-pyrifera_M_contig8148:9973..10228 | Macrocystis pyrifera P11B4 male | CDS | M-pyrifera_M_contig8148 9974..10228 - |
| 1622816721.3304598-CDS-M-pyrifera_M_contig8148:11136..11298 | 1622816721.3304598-CDS-M-pyrifera_M_contig8148:11136..11298 | Macrocystis pyrifera P11B4 male | CDS | M-pyrifera_M_contig8148 11137..11298 - |
| 1692278139.9044178-CDS-M-pyrifera_M_contig8148:11136..11298 | 1692278139.9044178-CDS-M-pyrifera_M_contig8148:11136..11298 | Macrocystis pyrifera P11B4 male | CDS | M-pyrifera_M_contig8148 11137..11298 - |
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_M-pyrifera_M_contig8148.19061.1 >prot_M-pyrifera_M_contig8148.19061.1 ID=prot_M-pyrifera_M_contig8148.19061.1|Name=mRNA_M-pyrifera_M_contig8148.19061.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=496bp
LALAALVVWFREFLTVLDDGAVGGEGEGSWGSPPSRLLRVIDQRVGCAQE
AVQLFVALCRGLGLRTRYVSCLDPLPPFPRSLRPTKQTRNNTVDLVAAEG
RKGRHRQSGGQAAATLGGSQAWAEVLCQGDRESLVRRSGRVVTGASRYAG
QPPPPPPPLAAQPRPLKRHRTELPKSLSGSGGGSSAEPVFGVDASVRDGD
DGGGGGGGGGGGGGGDGGGSGGGKVGRRAGGETKPTAFEEQKDATEERQA
AAPKAEVGAGAEAGAKAEAEAVVETARAPAEKQPPRKTPRKKGKVSAVSA
GDDKAKAALPQATAAPQRKTDSITTLTMARRRSPRGRPPREQSAEIPAAS
NISNGGGGETTSAPPPIESKMEVCLGGGAAETEAETGAEPGEREGRAAGV
DGAGSVATSAGARERWVHVDPVLGAADQPEKVQGLRFRKQLMPYVVAEDE
RRAIVDVTRRYSSQWSRTLRTRGRAMASQDGWWNLALRQWGASSVR back to topmRNA from alignment at M-pyrifera_M_contig8148:1329..11298- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_M-pyrifera_M_contig8148.19061.1 ID=mRNA_M-pyrifera_M_contig8148.19061.1|Name=mRNA_M-pyrifera_M_contig8148.19061.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=9970bp|location=Sequence derived from alignment at M-pyrifera_M_contig8148:1329..11298- (Macrocystis pyrifera P11B4 male)
TTGGCCTTGGCTGCTCTGGTCGTCTGGTTTCGGGAATTTCTGACTGTGTT
GGACGATGGCGCCGTCGGAGGCGAGGGCGAGGGCTCGTGGGGGTCACCTC
CGTCGCGGCTGCTGAGAGTCATCGATCAGCGGGTCGGGTGCGCTCAAGAG
GCTGTCCAGTTGGTGAGGGGGAGGGGCGGAACGTGTATGAGAGGATGGCT
GTGAGGCGTACGGGCGGCGGCGGCGGCGGGGGGGGGGCGGATATCGTATC
GGCGAAACGTCTGGGGTGCGCTACCGCGGTTGATTTTGTTCAGTTAATTT
GTTCGGTTGGTTAGCTTGCGGGTTGATTGATTGGTCGGTCGGTAGATTGG
TTGGTTAAGGCACTTGTAGTTAGAGGGGAAAGGGGGCGATGGATGAAGTG
AAAAGCGATTACCTTTGCCCTCTCTCTCAATCTCTGTCTCTCGCCCCCGC
TCTCACTTTCCCACCCCCGTGCTCCGTCTCGAAAGGATGCGTGGTCAATG
GTCCAAAGATAAGGCAAGCAGCAAATGAATACCCCCCACGCACACACACA
CCTCCATTCTACCGGGGGTTGTATGTTAGACCTTTGTTCATTTTTTTTTT
TTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTAT
TTTTTATTTATTTTTTTTTTCTATTATCTATATTTCGACACTACATTTTT
TTTTTTTTTTCTTTATATTTNNNNNNNNNNCCTCCCCTCTCGCGGGGGTT
GTTTGTTAGCCTTTTTTTATTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT
TAATCATCACTTTTACTTTCCAGTCAGGTACGACGAAATGGTGCAGCTAC
ACATGGCTGTGACCCATAATAACCCTATCCATATCGCCGACCGCCCGCGA
ATTTTCTCGGAACGAATATGTAATAAGGAATTAGTGTAGACTACCAAACA
ATATTTGGAAACTGGGCGTGGTCGTGAACACTAATGTTCCCCGCCCCCCC
CCCCCCCACCTCCCTCCCTCCCTTCCTCCCTCTCTCCCCCCTCCCTGTTC
GCGCGCACGCCGTTTTGCAGTTCGTGGCGTTGTGCCGAGGCCTCGGCCTT
CGAACGCGGTACGTGTCGTGTCTCGACCCTCTCCCACCTTTCCCGCGCTC
CCTGCGACCTACGAAGCAGACGCGGAACAACACGGTTGATCTCGTGGCGG
CGGAGGGGCGGAAAGGGCGTCACAGGCAGTCCGGCGGCCAAGCCGCAGCC
ACCTTGGGGGGGTCGCAGGCTTGGGCGGAGGTCCTGTGCCAGGGGGATAG
AGAGAGTCTGGTAAGGAGGAGCGGGGTCGCTTACTCTTGGTGCGGGAGTG
TCGTCGGGGGGGGGGGGCTGATGGGGTGGTTTTCCGGAAGGGTGGAAGCG
GAGGGGGGGTTTGCTTGGTTATGTTCGTTGTGGTTGTTGTTGTTGGTGTT
GGTATAGGTGTTGTTGGCACTGTTGGTGTTGTTGTGGTTGTTGCAGCTGA
TGTCGTTTGTTGTTGTTTTTTGTCATCGTTGTTGTTGTCCTTCACATGAA
CGTGATGAGGCGTTACTTCATCAGCTCCTGTTGAAAACCATGTTCAACTT
GCGTCCCACGTTCAGGGGACTGTTGTGTAACTACTCGGAAATGAAAGTCG
TGCAGAGCTAATAGTTGCTGCGGTAAAAAACGAACAATACAACGGCGAAG
TCGACTTTACCGCCGAAGCTGTTAAGTCGATTTTCCGTATTTTTTTTGTG
TTGGCGGCGAAGTGCTTGTCATCCGGGACCGGATGGGAAGAAGGGAGAAG
GCAGACCTTAGCAAGGAACTCAAGCACGTGTAGGTAGGTGGTAACGAAAA
ACGGGAAAAGGGTTGTTTGTGCGTACGCAGCAAGCGTTTTTCCCCTTCCA
ACCACGTTGTGTCTCTACCTCGTTCGAGCTGTTGGGTAGGAAAAATGGGT
GGGTGGGTGTGCGGATTGGTGAGTCGCGCTCACACCGTCGCGACAGAAAC
GTCTTTTTTGTTTTGCTCTGCAATGTGCTGGACGTTCGTAAGCCAACCAG
TCAGCCAATCAGCCGGCCGAGAGACGAACATAGCGGGACGTTGCTTTTTT
TATTGTGTCTCTTTCTTCCCCTCCCTCCTCGTTCTCCTTGTTATTGCTTT
TTTGTTTTTCGCTGAGGGCGTCCTCCTCCCGCCCTCCTCGTGTGTGTGTG
TGTGTGTTTTGCCCTCGTCTGCCTGTATGTACGAATCTCCCGCAGCGTGT
CGTTACGGGAGCTTCGCGCTACGCCGGACAACCGCCGCCGCCGCCGCCGC
CCCTCGCTGCACAGCCGCGGCCGCTGAAGCGACACCGCACCGAGCTGCCC
AAGTCCCTGTCCGGGTCGGGAGGGGGGAGCAGCGCCGAGCCGGTGTTGTT
GGACATCGACGACAACGACGTTCGGGATGCTATTTCCCGCCGAGGTGGCC
AAAGCGGAGTCGACGCAAGCGTCCGCGATGGTGACGATGGCGGCGGCGGC
GGCGGCGGCGGCGGTGGCGGTGGTGGCGGTGATGGTGGTGGCAGTGGTGG
GGGTAAGGTGGGGCGACGCGCAGGAGGCGAGACAAAGCCGACAGCCTTCG
AGGAACAGAAGGATGCGACAGAGGAACGGCAAGCGGCCGCGCCAAAAGCA
GAAGTGGGGGCGGGGGCGGAGGCGGGGGCGAAGGCAGAGGCAGAGGCCGT
GGTGGAGACCGCTCGCGCTCCGGCAGAAAAACAACCACCCAGGAAAACTC
CGCGGAAAAAAGGGAAGGTATCGGCGGTCTCTGCTGGCGACGATAAGGCC
AAAGCCGCGCTACCGCAGGCCACCGCGGCGCCGCAAAGAAAGACGGACAG
CATCACCACGTTGACAATGGCAAGACGCCGCTCTCCCCGCGGTCGGCCGC
CTCGAGAGCAGAGCGCGGAAATTCCCGCGGCGTCGAATATCAGCAACGGC
GGCGGCGGCGAAACGACAAGCGCCCCCCCCCCCATCGAGAGTAAAATGGA
GGTTTGCCTGGGTGGCGGGGCGGCTGAGACCGAGGCCGAGACGGGGGCGG
AGCCAGGAGAGCGGGAAGGGAGAGCGGCGGGGGTAGATGGCGCCGGCTCT
GTCGCCACTTCGGCCGGGGCACGGGAGAGGTGGGTTCACGTCGACCCCGT
CCTTGGTGCGGCGGACCAACCGGAGAAGGTGAGCGCCGGCCGGGGAAGGG
TGGGGGGCAAGCGGGGGGGGGGGTGCTTCGCTCTCTCTCCTGTCCTAGGA
ATATCGCTGGCAATCGCTATGAACGGTGGGACTAGCCGCAGCCGCCGCCA
CCCCTGCCGTCGCCGTGGCCGTCGCGGCTCATGCTCCCAGTTTTGGGAAG
ACACCTCTCGCACCCTCGCAAGTTTCTGCGACAGAAAAAAATGTAAAGTG
TTGTTGAAACGCACGCGTGCGCCGCCGACACCGCCGCCGCCGCCGTGGCA
CACGATATCTTGCTTGAGGACGATGAGTGTTCCGTGTCGTCGCCCGGTCC
GGTGGTCAATCACAAGAGAAATACCACTCTTTTGAGAGAAAGATGGAATC
GTTTTGGGGCTTTGGGGCGAATATTCTATGACTAGCGCACTCTATTTTAA
ACGAACGGAGTACGTAGTATATATTAATACAGCAGTTATGTTTGTGAAAT
TTTCGTGCTTTTTCGAACGTATCTCTTCGTTCGAGCGCTTTTGGGCAAAA
CGCTAAGTAGTCGACATGGGAAGCCCGGCCGGACACATTGGTCGAGGTCC
GGGCGCGATTCGTGCACTCTGGAGCGCGTGGCGGGCGCTCTAAGTTTTCT
TTTTCCGGCGGGAGTGGATAAGACGATTTCCCTGGTTTCAGTACGAGTAC
GAGAGTCCTTATTTTGTGCCAGGTACGTACGTACCGGTATAATGTTATAA
TGTTGTCTGTTTTCTTCCCTAGGCTCTCATGAGCTGTGAGCACACCGCCC
GGACATATACCAGGTACACAACAAACAACACGCACAGATACCATCGTTAC
AACGCTGCCGCCCACACGCCGTGTGTACGACCCACCCATATGCGCAGTAT
TGCTGTGGCTGGTTGTGTTTATCGGAGCCTGCCGTCCGTATTCCACCGTC
CGCCTTACCAGGTACCGGAATTACGTATGATACAATACGTACAAGTTGTG
TGTGTTTTACGCTAGGCCACGGAGTTTGGGCGCCCTTACGTGTGGCGTGC
GTTCATTCCTCAACCTTTCACAATTGTTTCCAATACTCGGGACTAGAGCA
AAGTATGTTCGAGAAAATACTGTAGGTACTTCTTGCACTCGCAGTATTTC
AGGTTTTTACTGCAGCGGATACTGCGAGTATACTCGAGTATTTCGAAGTT
GTGTACTACAACTGAGGATGCTACTCTGAGTATACTTTCGGGCTCGCACT
GATTCGGGATTCGCTACTGCTGCTGCTGCTGCTGCTGCTGCTGCTGTGGA
TACTACCTGTTGTGCTTCAAGTATCTCGGGTTTCTGTACTGCGGGTACTG
CAAGTACTATCAGTATTTCGTCCGTTGGTTGTGTTCGTACTGCGAGTACT
CGCAGTACCGAAATATTCTCATGCTCAGTCTACTTGGAATATGACGTGTA
CTTCGACCTTCTGTGCACCGTGTCGACAATTTTTAGACCCACTGTTCGAC
ACAAAACACTCAAACAGATGGTACCACAAGTGGGAGTTGGAGCGAATTAC
TTTCGATGGTACAACTCGAGTACTTGGAGCACTGGCAGTATTTCGGGAAT
ATGTACTGTGAGGAGTATGTACTGCAAGTACTCTCGGTATCTCGAGGTTC
TGTACTGCGCGTATTGCCTGTACTCCCAAGCATTTCGTGTTTCGGTACTG
CGGGTACATATTTGCCTGTGCTCTCGGGGGTCCGTACTGTTCATATTCTC
AGTATACTCTCAGCAGTTGGGCCTTCTCAGTACTCGCAATATTTTTGCCG
CCAGTACTCCATTACTCTCAGTACTCGGACTACGAATTGTTCTCGAGCAT
CTTCTACTTTGTCTGTAAAAGCTATTTTTTACCTAAAGCGCCAAGAAACA
TTGATTTTGGGGGAATATATTTGGGCAAATGCCAAAATCAGGTATACCTG
ATCCGTTTGAGCCAAAATCAGGTACATTTTAAAACCAAGTAAAAAACGCG
CGCCACGAGGGGTGTGATGTCCATGACAACCCGCAAAAAAAAAGAATGCG
CTTTTAAAGCATTAAGCGTGCCACATGGCCTCCAAAATCTGAAATGTTTT
GTTTTCTTCAGGGTGTAGGTACCACGGGCTCCACTCGGACCTGCAAAGAG
TCACTATTACTATGATTCGTTTGTTTCGCCACGGCGGGAGCGCCAAGAGT
ATTTACTCTGGCTCCCCCCCCCCGTTGACAGCTTAGAGCTTCCAGACCGT
CCTCGCGGAACCGCCTGCTCGGCACGAAATACTCTTGCCGTACGAAACCT
GAGACCACCTCGACGCGAGGTGGTGCAGACGAAACGCCGAGTGTACATGG
TGCTGTAAAGACTGCTGTGAACATAAAAAACAACAGAGTACACACAACAA
CTATTGATAACTGAAGCACATCGCACACCTCAAAGGAGAAAAAGTGAAAC
CAGCGTACGCATGTATGCATGTATATACGTGCTTTTACGTACGAGTACAG
AGTTTATACGCCAATACAGAAGAATTTCAACCGAGGGAGGGCAGACGCAT
ACGGAGGGAAAACACAGTGTACGTATGGCCTCTCTGATTGGTTCAAAGTT
GGCCAAAATCAATTGAAAGCTAGAGAGAGTAGAAAAAATCAGGTGTACCT
TGGCCTTTTCGTGCCAAAATCAGTTACAACGTCAGCTTGGCCAATAGCAG
GGCTCCTGGTGTGTGTTTTGTACTTGATTTCAGTATGTAACTGTTTTTGG
CACGAAAGTGGCCAGGTATACCTGATTTTGGCAAAAACCCAATATATTTT
GCATGTGCTGGATTTTACTCAGTCGGTCACAAAGTATTATGTCGCAACCT
CGACATCACGCAACTTTTTGTACTTACGTTTAAGCCGCAAGCATCAAATT
GATCGGCGCGAGTCATCTGTTCAGGATCAATATCCACTAACCGGTATACC
CTCTTTTATATTGTTGTAGTAGTAATGTGATCCCACGCTATTTCCGCAAA
CAACAGTATATAGTCTGTCCTCAAAAATATATGTGTGTGTTCTTCACATT
GATGATGGATGGATGCGGTTACTGTAGTTCTAAACAGGTGTGCAGGTATT
CATGCGAGTATTATTGGTTCTTGCGCCACTCCCCTAGGCACCTCCCGGAG
GGGAACCTTGTATATATCTTACTTCGCAGTTAATGTCCTTATATCTGGTA
TTAATAGTTGCTTTCGCCACCGAGATACTTTTCAAGCAAAACAAGACTGG
CTATAATCGAACGCCAACGTCCCGTCCGGCCTTTTGCCCCCCCCTCCCTC
CCTCGCCGCCCTCGTCCCCGGGGTTGTATGGAAAGGCTGGCCCAGCTTCG
ACAAAATTGTTTTGAATACCTTTTTTTCAAACCCTGCGTATATAGATAGC
CTTATGGAAGCTTCACCCCGCAAAAGGGTTTCAAATATGGCGATAACCAA
AATTGGGTACAGCCGGTCCGTTTCGAGTCGAAAACGGGTACACAGCCTTG
GACGCGAGTAAAAAACACTCTAATATCCGTAGCCCGCAAAACGCTTTTGA
GTACGCTTGACGTCAACCCCTACCCCTATACCACCATAACCCCGCAAAAT
AGGCACTTTTTCCGTACCAGGTGTTGAATACCTCGTAGCCCTTCAAAAGT
CCTGATTTTACCCCAACCGCCTTGAAATTTCGGAGTTGTCGCTAGTGCCG
ACTGGCTGTCGTTCGTGTCCCGGAATTGCGAAAATATTTTAATTGCAACC
AACCCTTGATATAATGCCCTGTACCTGGCGCCATAATCGTATCCCTATTT
TGCGAAATTGGGTGTAGCCCTTTTTTACAGACCTGGTATGTACGGTATAT
TCTCGGGTTATGTAGTGCTTAGTAGCCAACAGCGCAATTTAGTAGTAGTT
TTTTAGCACCAGGTATTTTATTACGGGGGCCCATAGTTAATAGAACCTAT
GGTATACATTAAAAAAAACTATATATTCACCTATTTTTACTAACAATATT
TGGTCCTATTTACTATGGTCCCCCGTAATAGAGGTTGCAAGCAACCCGTT
TTGCCGAAGCTCTGGGTCAAGCCAAGCCGTAAAAACACGAACGCACTGTT
ACGGGGGACCGTGGTAAAATTGGACCAAATATTTGTCGGTAAAAATAGGG
AAATATGTAGGTTTTTGTGTGTATCGCAGGTGCTATTTATTTACGGTCCC
CCGTGGTACGAAGTTACTTGCCTTTCCCTTCGCCGAGTCGATTCTCCCGT
TCGCGCCGGTGTTTTGCCCCGCCGCCGCCGGGTGTTTTTGTTGCGTACAA
CAGGTCCAGGGCTTGAGGTTCAGGAAGCAGCTCATGCCTTACGTGGTAGC
CGAGGACGAGAGGCGAGCGATTGTTGACGTCACGCGAAGGTAGGCGGGTG
GATGGGTAGGGAGGTGGGTGGGTGGGTAGGTGGATAGGTACGTAGACAGG
TGGACGGATGGACGGGTGGGTAGGCGGGTAGGCGGATGGGCTAAGGGGGA
GGTAGGGGAGTGGGGTGAGGAGGTTGGGTGGTTGAATAGGTAGGTAGGTG
GTGGAGGTGAGTGGGTGAATGGGTGTGCGTGCGTGCGCACAAGCGCCATT
CTGCTGTTGCCGTTGGACCCACTGCCGAGGCATGTACTTGACGCCGGGCG
CGACGACCGGTCGGCCCGCGCAATCCGCCGCGACCGCACCACGAAACACG
CGCTTGATAAGCGGCGGTGGTGGTGCGCGCATACAATCGACCCGGCTGGG
TTGAAAACGGTCTTGCCCACAAGTTTGCTCCGCGGTAGAAACTGGGAGAA
GGGGGCGGGGTGTACATACTCGACATCATGCATGGCCTTAGTCGTATGAC
CATAGACCCTCGCATCCCTACAATGCCGGCACGAAGCACGTGGGGCTTTC
ACCAACCAGGCAGACATTGCTTGCGCCAAGCGCGAAACGCCTTGAGGTGT
GCGGCGAGTCGCGTGAAGGGTGAGCTGCATCGTACTAAGAACCGCTTGTG
AGGCGGACTTGCATATGGACGACAGCTACAATGAGTTAATTTTTTTCCGG
TATGGCCACTTCCAGAGACAGCAATGGGGTTACTATGTAACTGCCTCGTG
GGTGCTTTATCGTAAACACTACGTGATATGATCATTCCCCTTGTGCGGAG
TAAAGGTTTTCCACCGTGCACAAATTTTCATACTCGATCACCAGCTGTGA
CCGACCGCCAAAAAACAGCAAAGGCGGTACCCTGGGTGTCTAGCTCACGT
ATTGAGCGGCATGTTTTACAGTGTCGTTGCTAACCGCACCTACTCAACCT
TATATATAATATATTGAGGGGTGTACTCATTTGTTGCTTGCCATAGTCTT
TTGACCGTTATCACTCATCCCTTTCGACGTGGAACACCGTTCCTACCCCT
CTTGGAAATATCTCCAACTTTTCGGCGCTCATCACGCTTTTTCCATTTAT
CACGTAGGAACCGGGGGGGGGGGGGTTCTGCCTCCCTTCCCACCCGATGA
TGTCCAGTTCTATGGGGTTTAGCCGGTCATATATATATATGTCTGTCGCC
ATCGCCCCCGGTTTGTTGGTTTTTAACTCGTGGTCACCCCCTTGCGTTCT
GGCTTCCACCCTTGCTTCTTGGGTGGGAAGTAGTTCCTTGGCCTATCGGA
CACGGGCTGTACTGACAATCGTACTTCAGCCCGAACTACACTCGCCACCG
CTGGTGCATGCGCCATGTGTCCGACGCCCTTCCTCCTGTGTATTGACTGA
CGCGCCAACAACCGAAGCTTGTTCCTCTTTTAGCAACATTTGTTTTCGCA
CGAATGTCAGCGGTGAGTTCGACCTACTGCGTTTTTTTTTTTTCGAATGT
TTGTGTGTGCCAGGGGGGAAACGAACGAGTGCAGTCGGCATTCCATATTT
TTATCCCATGTGCCAGCATCTAGCGTTTGGCACACGAGGTTGCATCGCAG
ATCAAGACTCTCTTTTTCGCCGCCGACGGAAACCCCAGCGCGGATGCTCC
TACACCGTTGTTGCTGTAGGTTATCTTATGGGGCGGAAATGCCCGAAAAT
GATGCTGATGCTGCTGGCTCGCAAGCCACGAGCCCCCCCCCCCCCGCGCG
CTCTATTGCCTTGTTAAGAAATTTCCGGGTCAAGTTTCTCCGCAGGGGCA
CACACTCAACGGAAAAATGGTGGCTTGGGAAAGAAGAATCTCGTTCTGAG
AGATAATTCCATGTTTTAGACGCGGTTGCGCTCGGCATTTTACACTTTCC
CGGTGGTCGAGAAAAATAGCCTCGAAATCCGTCAGAATTGGGGTGTGTGC
TATGTATCACGCATGCTTATGTCGCTTCCCCTATAGTCCGGAAAATAAAT
AATTCACTATTTTTGCGAAAAAAAAAAAAAAAAAAAATGAGGAGGGGGCA
AGGGACAATCAAGAGGGACTGCTGTTCACTGGTCGACAAGCATTGCCGTG
ATGGAGATAAATCCGGGGGCTGTACTCGTACCAGTGAATAAATAGACACC
AGGGAGGGCTACTCTGCTATCTGCAAGCGGGGCGTATATATTTCCGCGAT
GTGTAACGGTAACCTTCTTATACCGCTTCAAAAATGACCCAACTCTAATT
CCAAGTACCTTGTCTCCAAAATTTGGAGGCAGTTTTAGACGGGGTAAGGC
CTCAAATACTCCTGTGTACATATATATACATATATATATATATATTTGTG
GGGGCATCCAGGTATTCGTCGCAGTGGTCACGAACTCTGCGGACGAGGGG
GCGCGCCATGGCCAGCCAGGACGGGTGGTGGAATCTAGCTCTTCGCCAGT
GGGGGGCTTCGTCGGTCAGG back to topCoding sequence (CDS) from alignment at M-pyrifera_M_contig8148:1329..11298- >mRNA_M-pyrifera_M_contig8148.19061.1 ID=mRNA_M-pyrifera_M_contig8148.19061.1|Name=mRNA_M-pyrifera_M_contig8148.19061.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=2976bp|location=Sequence derived from alignment at M-pyrifera_M_contig8148:1329..11298- (Macrocystis pyrifera P11B4 male)
TTGGCCTTGGCTGCTCTGGTCGTCTGGTTTCGGGAATTTCTGACTGTGTT
GGACGATGGCGCCGTCGGAGGCGAGGGCGAGGGCTCGTGGGGGTCACCTC
CGTCGCGGCTGCTGAGAGTCATCGATCAGCGGGTCGGGTGCGCTCAAGAG
GCTGTCCAGTTGTTGGCCTTGGCTGCTCTGGTCGTCTGGTTTCGGGAATT
TCTGACTGTGTTGGACGATGGCGCCGTCGGAGGCGAGGGCGAGGGCTCGT
GGGGGTCACCTCCGTCGCGGCTGCTGAGAGTCATCGATCAGCGGGTCGGG
TGCGCTCAAGAGGCTGTCCAGTTGTTCGTGGCGTTGTGCCGAGGCCTCGG
CCTTCGAACGCGGTACGTGTCGTGTCTCGACCCTCTCCCACCTTTCCCGC
GCTCCCTGCGACCTACGAAGCAGACGCGGAACAACACGGTTGATCTCGTG
GCGGCGGAGGGGCGGAAAGGGCGTCACAGGCAGTCCGGCGGCCAAGCCGC
AGCCACCTTGGGGGGGTCGCAGGCTTGGGCGGAGGTCCTGTGCCAGGGGG
ATAGAGAGAGTCTGGTAAGGAGGAGCGGGTTCGTGGCGTTGTGCCGAGGC
CTCGGCCTTCGAACGCGGTACGTGTCGTGTCTCGACCCTCTCCCACCTTT
CCCGCGCTCCCTGCGACCTACGAAGCAGACGCGGAACAACACGGTTGATC
TCGTGGCGGCGGAGGGGCGGAAAGGGCGTCACAGGCAGTCCGGCGGCCAA
GCCGCAGCCACCTTGGGGGGGTCGCAGGCTTGGGCGGAGGTCCTGTGCCA
GGGGGATAGAGAGAGTCTGGTAAGGAGGAGCGGGCGTGTCGTTACGGGAG
CTTCGCGCTACGCCGGACAACCGCCGCCGCCGCCGCCGCCCCTCGCTGCA
CAGCCGCGGCCGCTGAAGCGACACCGCACCGAGCTGCCCAAGTCCCTGTC
CGGGTCGGGAGGGGGGAGCAGCGCCGAGCCGGTGTTCGTGTCGTTACGGG
AGCTTCGCGCTACGCCGGACAACCGCCGCCGCCGCCGCCGCCCCTCGCTG
CACAGCCGCGGCCGCTGAAGCGACACCGCACCGAGCTGCCCAAGTCCCTG
TCCGGGTCGGGAGGGGGGAGCAGCGCCGAGCCGGTGTTCGGAGTCGACGC
AAGCGTCCGCGATGGTGACGATGGCGGCGGCGGCGGCGGCGGCGGCGGTG
GCGGTGGTGGCGGTGATGGTGGTGGCAGTGGTGGGGGTAAGGTGGGGCGA
CGCGCAGGAGGCGAGACAAAGCCGACAGCCTTCGAGGAACAGAAGGATGC
GACAGAGGAACGGCAAGCGGCCGCGCCAAAAGCAGAAGTGGGGGCGGGGG
CGGAGGCGGGGGCGAAGGCAGAGGCAGAGGCCGTGGTGGAGACCGCTCGC
GCTCCGGCAGAAAAACAACCACCCAGGAAAACTCCGCGGAAAAAAGGGAA
GGTATCGGCGGTCTCTGCTGGCGACGATAAGGCCAAAGCCGCGCTACCGC
AGGCCACCGCGGCGCCGCAAAGAAAGACGGACAGCATCACCACGTTGACA
ATGGCAAGACGCCGCTCTCCCCGCGGTCGGCCGCCTCGAGAGCAGAGCGC
GGAAATTCCCGCGGCGTCGAATATCAGCAACGGCGGCGGCGGCGAAACGA
CAAGCGCCCCCCCCCCCATCGAGAGTAAAATGGAGGTTTGCCTGGGTGGC
GGGGCGGCTGAGACCGAGGCCGAGACGGGGGCGGAGCCAGGAGAGCGGGA
AGGGAGAGCGGCGGGGGTAGATGGCGCCGGCTCTGTCGCCACTTCGGCCG
GGGCACGGGAGAGGTGGGTTCACGTCGACCCCGTCCTTGGTGCGGCGGAC
CAACCGGAGAAGCGGAGTCGACGCAAGCGTCCGCGATGGTGACGATGGCG
GCGGCGGCGGCGGCGGCGGCGGTGGCGGTGGTGGCGGTGATGGTGGTGGC
AGTGGTGGGGGTAAGGTGGGGCGACGCGCAGGAGGCGAGACAAAGCCGAC
AGCCTTCGAGGAACAGAAGGATGCGACAGAGGAACGGCAAGCGGCCGCGC
CAAAAGCAGAAGTGGGGGCGGGGGCGGAGGCGGGGGCGAAGGCAGAGGCA
GAGGCCGTGGTGGAGACCGCTCGCGCTCCGGCAGAAAAACAACCACCCAG
GAAAACTCCGCGGAAAAAAGGGAAGGTATCGGCGGTCTCTGCTGGCGACG
ATAAGGCCAAAGCCGCGCTACCGCAGGCCACCGCGGCGCCGCAAAGAAAG
ACGGACAGCATCACCACGTTGACAATGGCAAGACGCCGCTCTCCCCGCGG
TCGGCCGCCTCGAGAGCAGAGCGCGGAAATTCCCGCGGCGTCGAATATCA
GCAACGGCGGCGGCGGCGAAACGACAAGCGCCCCCCCCCCCATCGAGAGT
AAAATGGAGGTTTGCCTGGGTGGCGGGGCGGCTGAGACCGAGGCCGAGAC
GGGGGCGGAGCCAGGAGAGCGGGAAGGGAGAGCGGCGGGGGTAGATGGCG
CCGGCTCTGTCGCCACTTCGGCCGGGGCACGGGAGAGGTGGGTTCACGTC
GACCCCGTCCTTGGTGCGGCGGACCAACCGGAGAAGGTCCAGGGCTTGAG
GTTCAGGAAGCAGCTCATGCCTTACGTGGTAGCCGAGGACGAGAGGCGAG
CGATTGTTGACGTCACGCGAAGGTCCAGGGCTTGAGGTTCAGGAAGCAGC
TCATGCCTTACGTGGTAGCCGAGGACGAGAGGCGAGCGATTGTTGACGTC
ACGCGAAGGTATTCGTCGCAGTGGTCACGAACTCTGCGGACGAGGGGGCG
CGCCATGGCCAGCCAGGACGGGTGGTGGAATCTAGCTCTTCGCCAGTGGG
GGGCTTCGTCGGTCAGGGTATTCGTCGCAGTGGTCACGAACTCTGCGGAC
GAGGGGGCGCGCCATGGCCAGCCAGGACGGGTGGTGGAATCTAGCTCTTC
GCCAGTGGGGGGCTTCGTCGGTCAGG back to top
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