mRNA_M-pyrifera_M_contig81445.19053.1 (mRNA) Macrocystis pyrifera P11B4 male
Overview
Homology
BLAST of mRNA_M-pyrifera_M_contig81445.19053.1 vs. uniprot
Match: A0A7X5WTS4_9ACTN (AAA family ATPase (Fragment) n=1 Tax=Actinomycetia bacterium TaxID=1883427 RepID=A0A7X5WTS4_9ACTN) HSP 1 Score: 251 bits (640), Expect = 2.200e-73 Identity = 157/289 (54.33%), Postives = 169/289 (58.48%), Query Frame = 1 Query: 1 ALTLALDEARAQAGAARLADVDGVLGTLLDLVAVDAGWELAFEAAVGEALGAVIVRDPDTARRSLDRLSDGDATGAVLALGGGVRRSDS-GGDSIRTRVRGTQSGVDELLDALLGHVGVVDGDWRAAADAVLADPSRTVVTRAGDRFGPDGWRIGASGTGATGAALAEAEERVAATQTGXXXXXXXXXXXXXXXXXRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXETALPVLEADETESLEKGRRLAAARADIE 864 ALTLALDEARA+AGAARLAD++GVLGTLLDLVAVD GWE AFEAA G+ALGAV+VRDP TAR +LD L G+ GAVLALG R G D +R RVRGT GVD LLDALLGHV VDGDWR A D V+ADP RTVVTRAGDRFGPDGWRIGASGTGATGAAL EA R AA + E +LP LEADETESLEKGRRLAAARA+IE Sbjct: 485 ALTLALDEARARAGAARLADLEGVLGTLLDLVAVDPGWEAAFEAAAGDALGAVVVRDPSTARTALDLLGAGEVAGAVLALGARPSRPRPVGADLVRRRVRGTAEGVDALLDALLGHVETVDGDWRVAMDLVMADPGRTVVTRAGDRFGPDGWRIGASGTGATGAALREATARAAAAERAWHAAAGAVASARDSRARAESRAADVGERLDRVDSGLAAAGDALQRIESDRRNLTTEADALQTRFDELTVRVAREEERVAELEGSLPDLEADETESLEKGRRLAAARAEIE 773
BLAST of mRNA_M-pyrifera_M_contig81445.19053.1 vs. uniprot
Match: A0A7W0KR38_9ACTN (AAA family ATPase n=1 Tax=Acidimicrobiia bacterium TaxID=2080302 RepID=A0A7W0KR38_9ACTN) HSP 1 Score: 193 bits (490), Expect = 7.560e-53 Identity = 110/176 (62.50%), Postives = 127/176 (72.16%), Query Frame = 1 Query: 1 ALTLALDEARAQAGAARLADVDGVLGTLLDLVAVDAGWELAFEAAVGEALGAVIVRDPDTARRSLDRLSDGDATGAVLALGGGVRRSDS--GGDSIRTRVRGTQSGVDELLDALLGHVGVVDGDWRAAADAVLADPSRTVVTRAGDRFGPDGWRIGASGTGATGAALAEAEERVAA 522 AL LALDEARA+AGA RLA VDGV+GTLLD+V VD GWE AFEAAVGEA+ AV+V D RR+L L GDA GAVLALG G + S GD++R+ VRG + GVD LLD ++G VD DW+AA D LA P+ VVTR GDRFGP GW +GASG+GATGAAL EA R A Sbjct: 22 ALALALDEARARAGAERLAAVDGVVGTLLDVVEVDPGWEPAFEAAVGEAIAAVVVDSVDNGRRALAELRSGDAAGAVLALGAGRHPAPSMVDGDAVRSHVRGIRPGVDGLLDVIVGGCVAVD-DWKAAVDVALAHPAAVVVTRDGDRFGPTGWHVGASGSGATGAALVEARSRAGA 196
BLAST of mRNA_M-pyrifera_M_contig81445.19053.1 vs. uniprot
Match: A0A2D6U7B7_9ACTN (Chromosome partition protein Smc n=7 Tax=Acidimicrobiaceae bacterium TaxID=2024894 RepID=A0A2D6U7B7_9ACTN) HSP 1 Score: 194 bits (493), Expect = 3.450e-52 Identity = 108/167 (64.67%), Postives = 122/167 (73.05%), Query Frame = 1 Query: 1 ALTLALDEARAQAGAARLADVDGVLGTLLDLVAVDAGWELAFEAAVGEALGAVIVRDPDTARRSLDRLSDGDATGAVLALGGGVRRSDSGGDSIRTRVRGTQSGVDELLDALLGHVGVVDGDWRAAADAVLADPSRTVVTRAGDRFGPDGWRIGASGTGATGAALAE 501 ALTLALDEARA++GA RLA VDGVLGTLLDLVAV+AGWE AFEAA G+AL AVIV DTAR +L L+ GD TGAVLALG G + + + V GT VD+LLD LLG DGDW+AA D LA P + VVTR GDRFG GWRIG++G GATGAALAE Sbjct: 485 ALTLALDEARARSGAQRLATVDGVLGTLLDLVAVEAGWEAAFEAAAGDALTAVIVDGTDTARLALTELASGDXTGAVLALGSRTGTRAEGAEFVXSHVSGTTPAVDDLLDVLLGDAITADGDWQAALDQALAHPGQVVVTRTGDRFGARGWRIGSAGPGATGAALAE 651
BLAST of mRNA_M-pyrifera_M_contig81445.19053.1 vs. uniprot
Match: A0A3M2GZE6_ACTSX (Chromosome partition protein Smc n=1 Tax=Actinomyces sp. TaxID=29317 RepID=A0A3M2GZE6_ACTSX) HSP 1 Score: 192 bits (489), Expect = 1.190e-51 Identity = 108/174 (62.07%), Postives = 124/174 (71.26%), Query Frame = 1 Query: 1 ALTLALDEARAQAGAARLADVDGVLGTLLDLVAVDAGWELAFEAAVGEALGAVIVRDPDTARRSLDRLSDGDATGAVLALGG---GVRRSDSGGDSIRTRVRGTQSGVDELLDALLGHVGVVDGDWRAAADAVLADPSRTVVTRAGDRFGPDGWRIGASGTGATGAALAEAEER 513 AL LALD ARA+AG+ RL D+DG+LG+LLDLV VDAGWE AFE+AVG+AL AV+V DPD ARR+L+RL+ GAVLALG G R+D G+++R VRG GVD LLD LL VVDGDW AA D LA P VVTR GDRF WR+G TGATGAALAEAE R Sbjct: 485 ALALALDSARARAGSDRLGDLDGMLGSLLDLVEVDAGWEAAFESAVGDALAAVVVADPDVARRALERLTAEGEAGAVLALGASGAGTPRADGPGEALRRHVRGLAPGVDALLDVLLHDAVVVDGDWTAAVDVALAHPDLVVVTRGGDRFAAGTWRLGQGATGATGAALAEAEAR 658
BLAST of mRNA_M-pyrifera_M_contig81445.19053.1 vs. uniprot
Match: A0A8F4J735_9ACTN (Chromosome partition protein Smc n=1 Tax=Aquihabitans sp. G128 TaxID=2849779 RepID=A0A8F4J735_9ACTN) HSP 1 Score: 189 bits (479), Expect = 2.570e-50 Identity = 109/179 (60.89%), Postives = 128/179 (71.51%), Query Frame = 1 Query: 1 ALTLALDEARAQAGAARLADVDGVLGTLLDLVAVDAGWELAFEAAVGEALGAVIVRDPDTARRSLDRLSDGDATGAVLALGGGVRRSDSG--GDSIRTRVRGTQSGVDELLDALLGHVGVVDGDWRAAADAVLADPSRTVVTRAGDRFGPDGWRIGASGTGATGAALAEAEERV-AATQ 528 AL LALD+ARA+AGA RLA +DGV+GTLLD+V VD GWE AFEAA GEA+ AV+V D+ RR+L L GDA GAVLALG G R G G+++R VRG + GVD LLD L+G V DW AA D LA+P VVTR GDRFGP GWR+GA+G+GATGAAL EA R AAT+ Sbjct: 485 ALALALDQARARAGAERLASIDGVVGTLLDVVEVDPGWEPAFEAAAGEAIAAVVVDSVDSGRRALAELRAGDAAGAVLALGAGRNRLPLGSDGEAVRDHVRGIRPGVDALLDVLVGSCVAV-ADWTAAVDVALANPDAVVVTRTGDRFGPTGWRVGATGSGATGAALEEARTRADAATE 662
BLAST of mRNA_M-pyrifera_M_contig81445.19053.1 vs. uniprot
Match: A0A7X7HT86_9ACTN (Chromosome partition protein Smc n=1 Tax=Acidimicrobiales bacterium TaxID=2201156 RepID=A0A7X7HT86_9ACTN) HSP 1 Score: 182 bits (463), Expect = 3.560e-48 Identity = 101/159 (63.52%), Postives = 118/159 (74.21%), Query Frame = 1 Query: 1 ALTLALDEARAQAGAARLADVDGVLGTLLDLVAVDAGWELAFEAAVGEALGAVIVRDPDTARRSLDRLSDGDATGAVLALGGG--VRRSDSGGDSIRTRVRGTQSGVDELLDALLGHVGVVDGDWRAAADAVLADPSRTVVTRAGDRFGPDGWRIGASG 471 AL ALD+ARA AGA RLA V GV+GTLLDLV VD GWE AFEAA GEA+ AV+V DTARR+L L DG+A+GAV+ALG + S SGG+ +R VRG + GVDELLDAL+G VV GDW +A DA LADP VVTR+GDRFGP GWR+G+ G Sbjct: 502 ALAQALDQARAAAGAERLAGVPGVVGTLLDLVEVDPGWEDAFEAAAGEAIAAVVVDSVDTARRALSELRDGNASGAVVALGAARSIPASSSGGERVRAHVRGIRDGVDELLDALVGSA-VVAGDWASAVDASLADPGSVVVTRSGDRFGPTGWRLGSGG 659
BLAST of mRNA_M-pyrifera_M_contig81445.19053.1 vs. uniprot
Match: UPI001C63B18D (chromosome segregation protein SMC n=1 Tax=Iamia sp. SCSIO 61187 TaxID=2722752 RepID=UPI001C63B18D) HSP 1 Score: 182 bits (463), Expect = 3.560e-48 Identity = 110/177 (62.15%), Postives = 127/177 (71.75%), Query Frame = 1 Query: 1 ALTLALDEARAQAGAARLADVDGVLGTLLDLVAVDAGWELAFEAAVGEALGAVIVRDPDTARRSLDRLSDGDATGAVLAL--GGGVRRSDSG----GDSIRTRVRGTQSGVDELLDALLGHVGVVDGDWRAAADAVLADPSRTVVTRAGDRFGPDGWRIGASGTGATGAALAEAEER 513 AL LALDEARA+AGA RLA V GVLGTLLDLVAVD GWE AFEAA G ALGAV+V + ARR+L+ L+ G+ GAV+ L G R S G+++R VR GV+ LLDAL+G VVD W A DAVLA P VVTRAGDRF PDGWR+GA+G+GATGAALAEA+ER Sbjct: 496 ALGLALDEARARAGAERLAGVSGVLGTLLDLVAVDEGWEAAFEAAAGAALGAVVVDGVEGARRALETLAAGELAGAVVPLTSASGPARDASDAIRDGEALRPHVRAVAPGVEGLLDALVGSAVVVDA-WPDAVDAVLAAPGTVVVTRAGDRFAPDGWRVGAAGSGATGAALAEAQER 671
BLAST of mRNA_M-pyrifera_M_contig81445.19053.1 vs. uniprot
Match: A0A359F0V0_9ACTN (SMC hinge domain-containing protein (Fragment) n=1 Tax=Acidimicrobiaceae bacterium TaxID=2024894 RepID=A0A359F0V0_9ACTN) HSP 1 Score: 175 bits (444), Expect = 1.130e-47 Identity = 100/172 (58.14%), Postives = 123/172 (71.51%), Query Frame = 1 Query: 1 ALTLALDEARAQAGAARLADVDGVLGTLLDLVAVDAGWELAFEAAVGEALGAVIVRDPDTARRSLDRLSDGDATGAVLALGGGV--RRSDSGGDSIRTRVRGTQSGVDELLDALLGHVGVVDGDWRAAADAVLADPSRTVVTRAGDRFGPDGWRIGASGTGATGAALAEAEE 510 AL+LALD+AR +AGAA LAD+DGV+GTLLD+V VD GWE AFEAA GEAL AV+V D AR++L L +G+ TGAVLALG G + G SIR +VRG + GVD+LLD L+G+ V G A DA ++ P+ VVT+AGDRF GWR+G +G GATGAAL EA E Sbjct: 301 ALSLALDQARQRAGAAHLADLDGVIGTLLDVVEVDPGWETAFEAAAGEALAAVVVADRTVARQALAALEEGELTGAVLALGTGHVGAAPPAIGTSIRAKVRGIRPGVDDLLDLLVGNAVAVSGGIEALFDAAVSHPTAVVVTQAGDRFAATGWRVGGTGGGATGAALVEATE 472
BLAST of mRNA_M-pyrifera_M_contig81445.19053.1 vs. uniprot
Match: A0A382U9S2_9ZZZZ (SMC hinge domain-containing protein (Fragment) n=1 Tax=marine metagenome TaxID=408172 RepID=A0A382U9S2_9ZZZZ) HSP 1 Score: 170 bits (430), Expect = 1.950e-47 Identity = 97/168 (57.74%), Postives = 117/168 (69.64%), Query Frame = 1 Query: 19 DEARAQAGAARLADVDGVLGTLLDLVAVDAGWELAFEAAVGEALGAVIVRDPDTARRSLDRLSDGDATGAVLALGGGV--RRSDSGGDSIRTRVRGTQSGVDELLDALLGHVGVVDGDWRAAADAVLADPSRTVVTRAGDRFGPDGWRIGASGTGATGAALAEAEERV 516 DEAR+QAGAA LA ++GVLGTLLDLV VD G++ AFEAA G+AL AV+V P+ AR +++ L GD + AVLAL GV + + G+ IR RVR + GVD LLD LLGH +VDG+ D LA P +VTR GDRFGP GWRIGA GATGAAL EAE R+ Sbjct: 1 DEARSQAGAAHLAGIEGVLGTLLDLVEVDDGYQAAFEAAAGDALDAVVVDGPERARMAVEALRRGDFSAAVLALDNGVPGQPAPRVGEPIRPRVRARRDGVDALLDRLLGHAVLVDGEPDEVVDVALAHPDAVIVTRVGDRFGPTGWRIGAGRRGATGAALEEAEARL 168
BLAST of mRNA_M-pyrifera_M_contig81445.19053.1 vs. uniprot
Match: A0A5Q2RGT4_9ACTN (Chromosome partition protein Smc n=1 Tax=Actinomarinicola tropica TaxID=2789776 RepID=A0A5Q2RGT4_9ACTN) HSP 1 Score: 179 bits (455), Expect = 4.140e-47 Identity = 146/309 (47.25%), Postives = 170/309 (55.02%), Query Frame = 1 Query: 1 ALTLALDEARAQAGAARLADVDGVLGTLLDLVAVDAGWELAFEAAVGEALGAVIVRDPDTARRSLDRLSDGDATGAVLALGGGVRRSDSG---GDSIRTRVRGTQSGVDELLDALLGHVGVVDGDWRAAADAVLADPSRTVVTRAGDRFGPDGWRIGASGTGATGAALAEAEERVAATQTGXXXXXXXXXXXXXXXXXRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXETALPVLEADETESLEKGRRLAAARADIETRAAEVCSLRTDIEVRSA 918 AL +ALD ARA+AGA RL+ VDGV+GTLLD+V VDAGWE AFEAA G+A+ AV+V D RR+LD L GD GAVLALG + + G+ +R VR V+ LLD L+G VDG W AA DA L P VVTR G RFG GWRIG +GTGATGAAL EA ERVAA XXXXXXXXXXXXXXXXX XXXX E LP+LE +E E +E+G+ LAAAR +E R A + S R VR+A Sbjct: 485 ALGMALDAARARAGAERLSGVDGVVGTLLDVVEVDAGWEAAFEAAAGDAITAVVVDGVDAGRRALDALVSGDTQGAVLALGARHAAAPAAPPIGEPVRRHVRSANRDVEALLDQLIGAAVAVDGGWSAAVDAALGHPGAVVVTRDGSRFGASGWRIGVAGTGATGAALEEANERVAAXXXXXXXXXXXXXXXXXXXXXXXXXXDAIAKELDANDGLLSAAGDALQRVETERRDATTQGEELRSRRDEQLARLERDRARRRELEATLPMLEDEEAERIEQGKALAAARTRLEQRTATLTSRRXXXXVRAA 793 The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig81445.19053.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_M-pyrifera_M_contig81445.19053.1 >prot_M-pyrifera_M_contig81445.19053.1 ID=prot_M-pyrifera_M_contig81445.19053.1|Name=mRNA_M-pyrifera_M_contig81445.19053.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=306bp ALTLALDEARAQAGAARLADVDGVLGTLLDLVAVDAGWELAFEAAVGEALback to top mRNA from alignment at M-pyrifera_M_contig81445:12..929- Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_M-pyrifera_M_contig81445.19053.1 ID=mRNA_M-pyrifera_M_contig81445.19053.1|Name=mRNA_M-pyrifera_M_contig81445.19053.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=918bp|location=Sequence derived from alignment at M-pyrifera_M_contig81445:12..929- (Macrocystis pyrifera P11B4 male)back to top Coding sequence (CDS) from alignment at M-pyrifera_M_contig81445:12..929- >mRNA_M-pyrifera_M_contig81445.19053.1 ID=mRNA_M-pyrifera_M_contig81445.19053.1|Name=mRNA_M-pyrifera_M_contig81445.19053.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=1836bp|location=Sequence derived from alignment at M-pyrifera_M_contig81445:12..929- (Macrocystis pyrifera P11B4 male)back to top |