mRNA_M-pyrifera_M_contig8144.19047.1 (mRNA) Macrocystis pyrifera P11B4 male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_M-pyrifera_M_contig8144.19047.1
Unique NamemRNA_M-pyrifera_M_contig8144.19047.1
TypemRNA
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Homology
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BLAST of mRNA_M-pyrifera_M_contig8144.19047.1 vs. uniprot
Match: D7G6C0_ECTSI (Mitogen-activated protein kinase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G6C0_ECTSI)

HSP 1 Score: 174 bits (441), Expect = 3.330e-52
Identity = 87/87 (100.00%), Postives = 87/87 (100.00%), Query Frame = 1 
Query:    1 QVAIKKVGDVFSDLVDAKRIVREIKLLRHFDGHENIIAIADIMTIPPDTTDFKDVYIVTNLMESDMDRIIASGQPLTDQHFQYFIYQ 261
            QVAIKKVGDVFSDLVDAKRIVREIKLLRHFDGHENIIAIADIMTIPPDTTDFKDVYIVTNLMESDMDRIIASGQPLTDQHFQYFIYQ
Sbjct:   46 QVAIKKVGDVFSDLVDAKRIVREIKLLRHFDGHENIIAIADIMTIPPDTTDFKDVYIVTNLMESDMDRIIASGQPLTDQHFQYFIYQ 132
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BLAST of mRNA_M-pyrifera_M_contig8144.19047.1 vs. uniprot
Match: A0A6H5JGD5_9PHAE (Mitogen-activated protein kinase n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JGD5_9PHAE)

HSP 1 Score: 172 bits (435), Expect = 2.050e-51
Identity = 85/86 (98.84%), Postives = 86/86 (100.00%), Query Frame = 1 
Query:    4 VAIKKVGDVFSDLVDAKRIVREIKLLRHFDGHENIIAIADIMTIPPDTTDFKDVYIVTNLMESDMDRIIASGQPLTDQHFQYFIYQ 261
            VAIKKVGDVFSDLVDAKRIVREIKLLRHFDGHENI+AIADIMTIPPDTTDFKDVYIVTNLMESDMDRIIASGQPLTDQHFQYFIYQ
Sbjct:   22 VAIKKVGDVFSDLVDAKRIVREIKLLRHFDGHENIVAIADIMTIPPDTTDFKDVYIVTNLMESDMDRIIASGQPLTDQHFQYFIYQ 107
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BLAST of mRNA_M-pyrifera_M_contig8144.19047.1 vs. uniprot
Match: A0A836CP22_9STRA (Mitogen-activated protein kinase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CP22_9STRA)

HSP 1 Score: 159 bits (402), Expect = 1.810e-45
Identity = 76/87 (87.36%), Postives = 84/87 (96.55%), Query Frame = 1 
Query:    1 QVAIKKVGDVFSDLVDAKRIVREIKLLRHFDGHENIIAIADIMTIPPDTTDFKDVYIVTNLMESDMDRIIASGQPLTDQHFQYFIYQ 261
            QVAIKK+GDVF+DLVDAKRI+REIKLLRHFDGHENII I DIM +PP+TTDFKDVYIVTNLMESDMDRII+SGQPL+DQHFQYF+YQ
Sbjct:   50 QVAIKKIGDVFNDLVDAKRILREIKLLRHFDGHENIINITDIMCLPPNTTDFKDVYIVTNLMESDMDRIISSGQPLSDQHFQYFLYQ 136
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BLAST of mRNA_M-pyrifera_M_contig8144.19047.1 vs. uniprot
Match: W7TLJ6_9STRA (Mitogen-activated protein kinase n=4 Tax=Monodopsidaceae TaxID=425072 RepID=W7TLJ6_9STRA)

HSP 1 Score: 147 bits (371), Expect = 4.510e-40
Identity = 69/87 (79.31%), Postives = 80/87 (91.95%), Query Frame = 1 
Query:    1 QVAIKKVGDVFSDLVDAKRIVREIKLLRHFDGHENIIAIADIMTIPPDTTDFKDVYIVTNLMESDMDRIIASGQPLTDQHFQYFIYQ 261
            +VAIKKVGD F+DLVDAKR++REIKLLRHF GHENI+ I DIMT+PP+T DF+DVYIVTNLMESD+DRII S QPL+DQHFQYF+YQ
Sbjct:   49 RVAIKKVGDTFNDLVDAKRVLREIKLLRHFIGHENIVQIYDIMTVPPNTEDFRDVYIVTNLMESDLDRIIGSNQPLSDQHFQYFLYQ 135
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BLAST of mRNA_M-pyrifera_M_contig8144.19047.1 vs. uniprot
Match: A0A6U1B509_9STRA (Mitogen-activated protein kinase n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A6U1B509_9STRA)

HSP 1 Score: 139 bits (351), Expect = 2.760e-38
Identity = 65/87 (74.71%), Postives = 78/87 (89.66%), Query Frame = 1 
Query:    1 QVAIKKVGDVFSDLVDAKRIVREIKLLRHFDGHENIIAIADIMTIPPDTTDFKDVYIVTNLMESDMDRIIASGQPLTDQHFQYFIYQ 261
            +VAIKK+  VF+DLVDAKRI+REIKLLRHF  HENII + D++T+PP+T DF DVYI+TNLMESD+DRII+S QPLTDQHFQYF+YQ
Sbjct:   47 RVAIKKIRRVFNDLVDAKRILREIKLLRHFQNHENIITVKDLITVPPNTIDFTDVYIITNLMESDLDRIISSRQPLTDQHFQYFLYQ 133
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BLAST of mRNA_M-pyrifera_M_contig8144.19047.1 vs. uniprot
Match: A0A6V1P1J1_HETAK (Mitogen-activated protein kinase n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A6V1P1J1_HETAK)

HSP 1 Score: 136 bits (342), Expect = 8.310e-37
Identity = 64/87 (73.56%), Postives = 76/87 (87.36%), Query Frame = 1 
Query:    1 QVAIKKVGDVFSDLVDAKRIVREIKLLRHFDGHENIIAIADIMTIPPDTTDFKDVYIVTNLMESDMDRIIASGQPLTDQHFQYFIYQ 261
            QVAIKK+ DVFSDL+DAKRI+RE+KLLRHF  HEN+I + D M IP +TT+F+DVYIVT L ESDMDRII+SGQ LTDQHFQYF++Q
Sbjct:   51 QVAIKKIADVFSDLIDAKRILRELKLLRHFGAHENVINVIDCMCIPANTTNFRDVYIVTRLFESDMDRIISSGQALTDQHFQYFLFQ 137
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BLAST of mRNA_M-pyrifera_M_contig8144.19047.1 vs. uniprot
Match: A0A7S2XWA1_9STRA (Mitogen-activated protein kinase n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2XWA1_9STRA)

HSP 1 Score: 133 bits (335), Expect = 1.040e-35
Identity = 65/87 (74.71%), Postives = 75/87 (86.21%), Query Frame = 1 
Query:    1 QVAIKKVGDVFSDLVDAKRIVREIKLLRHFDGHENIIAIADIMTIPPDTTDFKDVYIVTNLMESDMDRIIASGQPLTDQHFQYFIYQ 261
            QVAIKKV DVF DLVDAKRI+REIKLL HF  HEN+I + DIM IP +T+ F+DVYIVT LMESDMDRII+SGQPL+ QHFQYF++Q
Sbjct:   51 QVAIKKVADVFQDLVDAKRILREIKLLSHFARHENVITVLDIMCIPQNTSRFRDVYIVTGLMESDMDRIISSGQPLSGQHFQYFLFQ 137
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BLAST of mRNA_M-pyrifera_M_contig8144.19047.1 vs. uniprot
Match: A0A8J2WYE0_9STRA (Mitogen-activated protein kinase n=1 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A8J2WYE0_9STRA)

HSP 1 Score: 133 bits (334), Expect = 1.270e-35
Identity = 62/87 (71.26%), Postives = 76/87 (87.36%), Query Frame = 1 
Query:    1 QVAIKKVGDVFSDLVDAKRIVREIKLLRHFDGHENIIAIADIMTIPPDTTDFKDVYIVTNLMESDMDRIIASGQPLTDQHFQYFIYQ 261
            +VAIKK+ +VF DLVDAKRI+REIKLLRHF  HENI+ + D++T+PP+T DF+DVYIVTNLMESD+DRII S Q LT+QH QYF+YQ
Sbjct:   48 RVAIKKIANVFGDLVDAKRILREIKLLRHFGSHENIVQVKDLVTVPPNTIDFQDVYIVTNLMESDLDRIITSRQALTNQHHQYFLYQ 134
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BLAST of mRNA_M-pyrifera_M_contig8144.19047.1 vs. uniprot
Match: A0A7S3JNM5_9STRA (Mitogen-activated protein kinase n=2 Tax=Aureoumbra lagunensis TaxID=44058 RepID=A0A7S3JNM5_9STRA)

HSP 1 Score: 132 bits (331), Expect = 4.040e-35
Identity = 64/87 (73.56%), Postives = 76/87 (87.36%), Query Frame = 1 
Query:    1 QVAIKKVGDVFSDLVDAKRIVREIKLLRHFDGHENIIAIADIMTIPPDTTDFKDVYIVTNLMESDMDRIIASGQPLTDQHFQYFIYQ 261
            +VAIKK+ +VFSDLVDAKRI+REIKLLRHF  HENI+ I DI+T+P +T DF DVYIVTNLMESD+DRII+S Q LT+QH QYF+YQ
Sbjct:   48 KVAIKKIANVFSDLVDAKRILREIKLLRHFGSHENIVVIKDIITVPQNTIDFCDVYIVTNLMESDLDRIISSRQSLTNQHHQYFLYQ 134
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BLAST of mRNA_M-pyrifera_M_contig8144.19047.1 vs. uniprot
Match: A0A6A4ZEN9_9STRA (Protein kinase domain-containing protein n=1 Tax=Aphanomyces astaci TaxID=112090 RepID=A0A6A4ZEN9_9STRA)

HSP 1 Score: 124 bits (310), Expect = 2.790e-34
Identity = 58/87 (66.67%), Postives = 74/87 (85.06%), Query Frame = 1 
Query:    1 QVAIKKVGDVFSDLVDAKRIVREIKLLRHFDGHENIIAIADIMTIPPDTTDFKDVYIVTNLMESDMDRIIASGQPLTDQHFQYFIYQ 261
            +VAIKK+ DVF DL DAKRI+RE+KLL+H   HENII I D++ IPP+TT+F D+YIVT+LMESD++RII+S Q L+D HFQYF+YQ
Sbjct:   33 KVAIKKITDVFDDLTDAKRILREMKLLKHLGAHENIINILDVILIPPNTTNFDDIYIVTDLMESDLERIISSTQTLSDAHFQYFLYQ 119
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig8144.19047.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7G6C0_ECTSI3.330e-52100.00Mitogen-activated protein kinase n=1 Tax=Ectocarpu... [more]
A0A6H5JGD5_9PHAE2.050e-5198.84Mitogen-activated protein kinase n=1 Tax=Ectocarpu... [more]
A0A836CP22_9STRA1.810e-4587.36Mitogen-activated protein kinase n=1 Tax=Tribonema... [more]
W7TLJ6_9STRA4.510e-4079.31Mitogen-activated protein kinase n=4 Tax=Monodopsi... [more]
A0A6U1B509_9STRA2.760e-3874.71Mitogen-activated protein kinase n=1 Tax=Rhizochro... [more]
A0A6V1P1J1_HETAK8.310e-3773.56Mitogen-activated protein kinase n=1 Tax=Heterosig... [more]
A0A7S2XWA1_9STRA1.040e-3574.71Mitogen-activated protein kinase n=1 Tax=Fibrocaps... [more]
A0A8J2WYE0_9STRA1.270e-3571.26Mitogen-activated protein kinase n=1 Tax=Pelagomon... [more]
A0A7S3JNM5_9STRA4.040e-3573.56Mitogen-activated protein kinase n=2 Tax=Aureoumbr... [more]
A0A6A4ZEN9_9STRA2.790e-3466.67Protein kinase domain-containing protein n=1 Tax=A... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig8144contigM-pyrifera_M_contig8144:568..828 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-19
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score126.7
Seed ortholog evalue5.2e-27
Seed eggNOG ortholog36331.EPrPI00000017260
KEGG koko:K04371,ko:K20536
KEGG Pathwayko01521,ko01522,ko01524,ko04010,ko04011,ko04012,ko04013,ko04014,ko04015,ko04016,ko04022,ko04024,ko04062,ko04066,ko04068,ko04071,ko04072,ko04114,ko04140,ko04150,ko04151,ko04210,ko04214,ko04218,ko04261,ko04270,ko04320,ko04350,ko04360,ko04370,ko04371,ko04380,ko04510,ko04520,ko04540,ko04550,ko04611,ko04620,ko04621,ko04650,ko04657,ko04658,ko04659,ko04660,ko04662,ko04664,ko04666,ko04668,ko04713,ko04720,ko04722,ko04723,ko04724,ko04725,ko04726,ko04730,ko04810,ko04910,ko04912,ko04914,ko04915,ko04916,ko04917,ko04919,ko04921,ko04926,ko04930,ko04933,ko04934,ko04960,ko05010,ko05020,ko05034,ko05131,ko05132,ko05133,ko05140,ko05142,ko05145,ko05152,ko05160,ko05161,ko05164,ko05165,ko05167,ko05200,ko05203,ko05205,ko05210,ko05211,ko05212,ko05213,ko05214,ko05215,ko05216,ko05218,ko05219,ko05220,ko05221,ko05223,ko05224,ko05225,ko05226,ko05230,ko05231,map01521,map01522,map01524,map04010,map04011,map04012,map04013,map04014,map04015,map04016,map04022,map04024,map04062,map04066,map04068,map04071,map04072,map04114,map04140,map04150,map04151,map04210,map04214,map04218,map04261,map04270,map04320,map04350,map04360,map04370,map04371,map04380,map04510,map04520,map04540,map04550,map04611,map04620,map04621,map04650,map04657,map04658,map04659,map04660,map04662,map04664,map04666,map04668,map04713,map04720,map04722,map04723,map04724,map04725,map04726,map04730,map04810,map04910,map04912,map04914,map04915,map04916,map04917,map04919,map04921,map04926,map04930,map04933,map04934,map04960,map05010,map05020,map05034,map05131,map05132,map05133,map05140,map05142,map05145,map05152,map05160,map05161,map05164,map05165,map05167,map05200,map05203,map05205,map05210,map05211,map05212,map05213,map05214,map05215,map05216,map05218,map05219,map05220,map05221,map05223,map05224,map05225,map05226,map05230,map05231
KEGG ModuleM00687
Hectar predicted targeting categoryother localisation
EggNOG free text desc.MAP kinase. Source PGD
EggNOG OGs1MG2N@121069,KOG0660@1,KOG0660@2759
EC2.7.11.24
COG Functional cat.T
Best tax levelPythiales
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko00002,ko01000,ko01001,ko03036,ko04147
Exons1
Model size261
Cds size261
Stop0
Start0
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622816720.6718996-CDS-M-pyrifera_M_contig8144:567..8281622816720.6718996-CDS-M-pyrifera_M_contig8144:567..828Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig8144 568..828 -
1692278139.5236278-CDS-M-pyrifera_M_contig8144:567..8281692278139.5236278-CDS-M-pyrifera_M_contig8144:567..828Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig8144 568..828 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig8144.19047.1prot_M-pyrifera_M_contig8144.19047.1Macrocystis pyrifera P11B4 malepolypeptideM-pyrifera_M_contig8144 568..828 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_M-pyrifera_M_contig8144.19047.1

>prot_M-pyrifera_M_contig8144.19047.1 ID=prot_M-pyrifera_M_contig8144.19047.1|Name=mRNA_M-pyrifera_M_contig8144.19047.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=87bp
QVAIKKVGDVFSDLVDAKRIVREIKLLRHFDGHENIIAIADIMTIPPDTT
DFKDVYIVTNLMESDMDRIIASGQPLTDQHFQYFIYQ
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mRNA from alignment at M-pyrifera_M_contig8144:568..828-

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_M-pyrifera_M_contig8144.19047.1 ID=mRNA_M-pyrifera_M_contig8144.19047.1|Name=mRNA_M-pyrifera_M_contig8144.19047.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=261bp|location=Sequence derived from alignment at M-pyrifera_M_contig8144:568..828- (Macrocystis pyrifera P11B4 male)
CAGGTGGCGATCAAGAAAGTCGGCGACGTGTTCAGCGACCTCGTAGACGC
GAAGCGCATCGTGCGGGAAATCAAGCTGCTGCGGCATTTCGACGGACACG
AGAATATCATAGCGATTGCGGACATCATGACGATTCCTCCGGACACCACC
GACTTCAAAGACGTGTACATCGTGACAAATCTCATGGAATCGGATATGGA
CCGGATCATCGCATCGGGGCAGCCTCTGACTGACCAGCACTTTCAATACT
TCATTTACCAG
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Coding sequence (CDS) from alignment at M-pyrifera_M_contig8144:568..828-

>mRNA_M-pyrifera_M_contig8144.19047.1 ID=mRNA_M-pyrifera_M_contig8144.19047.1|Name=mRNA_M-pyrifera_M_contig8144.19047.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=522bp|location=Sequence derived from alignment at M-pyrifera_M_contig8144:568..828- (Macrocystis pyrifera P11B4 male)
CAGGTGGCGATCAAGAAAGTCGGCGACGTGTTCAGCGACCTCGTAGACGC
GAAGCGCATCGTGCGGGAAATCAAGCTGCTGCGGCATTTCGACGGACACG
AGAATATCATAGCGATTGCGGACATCATGACGATTCCTCCGGACACCACC
GACTTCAAAGACGTGTACATCGTGACAAATCTCATGGAATCGGATATGGA
CCGGATCATCGCATCGGGGCAGCCTCTGACTGACCAGCACTTTCAATACT
TCATTTACCAGCAGGTGGCGATCAAGAAAGTCGGCGACGTGTTCAGCGAC
CTCGTAGACGCGAAGCGCATCGTGCGGGAAATCAAGCTGCTGCGGCATTT
CGACGGACACGAGAATATCATAGCGATTGCGGACATCATGACGATTCCTC
CGGACACCACCGACTTCAAAGACGTGTACATCGTGACAAATCTCATGGAA
TCGGATATGGACCGGATCATCGCATCGGGGCAGCCTCTGACTGACCAGCA
CTTTCAATACTTCATTTACCAG
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