mRNA_M-pyrifera_M_contig81392.19041.1 (mRNA) Macrocystis pyrifera P11B4 male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_M-pyrifera_M_contig81392.19041.1
Unique NamemRNA_M-pyrifera_M_contig81392.19041.1
TypemRNA
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Homology
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig81392.19041.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 0
Match NameE-valueIdentityDescription
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig81392contigM-pyrifera_M_contig81392:195..920 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-19
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Properties
Property NameValue
Taxonomic scopeMetazoa
Seed ortholog score64.7
Seed ortholog evalue6.8e-08
Seed eggNOG ortholog8128.ENSONIP00000023769
Preferred nameNTAN1
KEGG rclassRC00010
KEGG koko:K14662
KEGG ReactionR11559
Hectar predicted targeting categorysignal peptide
GOsGO:0003008,GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005737,GO:0006508,GO:0006511,GO:0006807,GO:0007610,GO:0007611,GO:0007613,GO:0007626,GO:0008150,GO:0008152,GO:0008344,GO:0008418,GO:0009056,GO:0009057,GO:0009987,GO:0016787,GO:0016810,GO:0016811,GO:0019538,GO:0019941,GO:0030163,GO:0030534,GO:0032501,GO:0043170,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043632,GO:0044237,GO:0044238,GO:0044248,GO:0044257,GO:0044260,GO:0044265,GO:0044267,GO:0044424,GO:0044464,GO:0050877,GO:0050890,GO:0051603,GO:0071704,GO:1901564,GO:1901565,GO:1901575
EggNOG free text desc.N-terminal asparagine
EggNOG OGs28KA5@1,2QSQW@2759,38RR1@33154,3BD7P@33208,3D100@33213,483YV@7711,4915K@7742,49UJ4@7898
EC3.5.1.121
COG Functional cat.S
Best tax levelActinopterygii
Best eggNOG OGNA|NA|NA
BRITEko00000,ko01000
Exons1
Model size726
Cds size726
Stop0
Start0
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622816720.4239228-CDS-M-pyrifera_M_contig81392:194..9201622816720.4239228-CDS-M-pyrifera_M_contig81392:194..920Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig81392 195..920 +
1692278139.4192116-CDS-M-pyrifera_M_contig81392:194..9201692278139.4192116-CDS-M-pyrifera_M_contig81392:194..920Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig81392 195..920 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig81392.19041.1prot_M-pyrifera_M_contig81392.19041.1Macrocystis pyrifera P11B4 malepolypeptideM-pyrifera_M_contig81392 195..920 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_M-pyrifera_M_contig81392.19041.1

>prot_M-pyrifera_M_contig81392.19041.1 ID=prot_M-pyrifera_M_contig81392.19041.1|Name=mRNA_M-pyrifera_M_contig81392.19041.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=242bp
VIGSVGATTCTILLLCSSTRVACAHVPDDEEPLRKDIAGLVDLVGETSEE
EVEAVLIGAFDKTSSSKNSLRAVVLGMEMARCRVKIRYQQVGESNSAKHV
PKVTAAGIEAKSGNVVIWPSSFPPSSITPLASVRGMRPFHPPEVTLGLAL
ITPSVSPPTLLRLEFTPFPCQLETATMEHLCTLNDKTLLPMISTSPDAEP
EWFVEEMRKTMGLMAKGIGPGRFLPQIYERVADGEGWKWRRV
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mRNA from alignment at M-pyrifera_M_contig81392:195..920+

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_M-pyrifera_M_contig81392.19041.1 ID=mRNA_M-pyrifera_M_contig81392.19041.1|Name=mRNA_M-pyrifera_M_contig81392.19041.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=726bp|location=Sequence derived from alignment at M-pyrifera_M_contig81392:195..920+ (Macrocystis pyrifera P11B4 male)
GTGATTGGGAGTGTAGGTGCTACAACGTGCACAATCCTGCTTCTTTGCTC
ATCGACGCGTGTTGCATGTGCGCATGTCCCTGATGATGAAGAGCCTCTCC
GAAAAGATATTGCTGGACTTGTAGATCTTGTTGGGGAAACAAGTGAGGAG
GAAGTAGAGGCCGTATTGATTGGAGCATTTGACAAAACTTCATCGTCCAA
GAATTCATTACGAGCAGTTGTTCTTGGGATGGAAATGGCTCGATGTCGAG
TGAAAATTAGGTATCAGCAGGTAGGTGAATCAAATTCTGCGAAACATGTT
CCCAAAGTAACTGCAGCTGGAATTGAAGCAAAAAGTGGGAATGTTGTGAT
CTGGCCAAGTTCCTTTCCTCCATCCAGCATTACTCCACTTGCAAGTGTTC
GAGGAATGCGCCCTTTTCACCCTCCAGAAGTCACATTGGGCCTCGCTCTC
ATCACTCCATCTGTGTCACCACCAACATTATTGCGACTCGAATTCACCCC
ATTTCCATGCCAACTAGAAACTGCCACGATGGAACACCTGTGCACTCTCA
ACGACAAAACACTCCTCCCTATGATTTCAACCTCACCAGATGCAGAACCA
GAATGGTTCGTAGAGGAAATGAGGAAGACTATGGGACTGATGGCGAAAGG
GATTGGACCAGGTCGTTTCCTCCCTCAAATCTACGAAAGAGTAGCAGATG
GAGAGGGATGGAAGTGGAGAAGAGTA
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Coding sequence (CDS) from alignment at M-pyrifera_M_contig81392:195..920+

>mRNA_M-pyrifera_M_contig81392.19041.1 ID=mRNA_M-pyrifera_M_contig81392.19041.1|Name=mRNA_M-pyrifera_M_contig81392.19041.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=1452bp|location=Sequence derived from alignment at M-pyrifera_M_contig81392:195..920+ (Macrocystis pyrifera P11B4 male)
GTGATTGGGAGTGTAGGTGCTACAACGTGCACAATCCTGCTTCTTTGCTC
ATCGACGCGTGTTGCATGTGCGCATGTCCCTGATGATGAAGAGCCTCTCC
GAAAAGATATTGCTGGACTTGTAGATCTTGTTGGGGAAACAAGTGAGGAG
GAAGTAGAGGCCGTATTGATTGGAGCATTTGACAAAACTTCATCGTCCAA
GAATTCATTACGAGCAGTTGTTCTTGGGATGGAAATGGCTCGATGTCGAG
TGAAAATTAGGTATCAGCAGGTAGGTGAATCAAATTCTGCGAAACATGTT
CCCAAAGTAACTGCAGCTGGAATTGAAGCAAAAAGTGGGAATGTTGTGAT
CTGGCCAAGTTCCTTTCCTCCATCCAGCATTACTCCACTTGCAAGTGTTC
GAGGAATGCGCCCTTTTCACCCTCCAGAAGTCACATTGGGCCTCGCTCTC
ATCACTCCATCTGTGTCACCACCAACATTATTGCGACTCGAATTCACCCC
ATTTCCATGCCAACTAGAAACTGCCACGATGGAACACCTGTGCACTCTCA
ACGACAAAACACTCCTCCCTATGATTTCAACCTCACCAGATGCAGAACCA
GAATGGTTCGTAGAGGAAATGAGGAAGACTATGGGACTGATGGCGAAAGG
GATTGGACCAGGTCGTTTCCTCCCTCAAATCTACGAAAGAGTAGCAGATG
GAGAGGGATGGAAGTGGAGAAGAGTAGTGATTGGGAGTGTAGGTGCTACA
ACGTGCACAATCCTGCTTCTTTGCTCATCGACGCGTGTTGCATGTGCGCA
TGTCCCTGATGATGAAGAGCCTCTCCGAAAAGATATTGCTGGACTTGTAG
ATCTTGTTGGGGAAACAAGTGAGGAGGAAGTAGAGGCCGTATTGATTGGA
GCATTTGACAAAACTTCATCGTCCAAGAATTCATTACGAGCAGTTGTTCT
TGGGATGGAAATGGCTCGATGTCGAGTGAAAATTAGGTATCAGCAGGTAG
GTGAATCAAATTCTGCGAAACATGTTCCCAAAGTAACTGCAGCTGGAATT
GAAGCAAAAAGTGGGAATGTTGTGATCTGGCCAAGTTCCTTTCCTCCATC
CAGCATTACTCCACTTGCAAGTGTTCGAGGAATGCGCCCTTTTCACCCTC
CAGAAGTCACATTGGGCCTCGCTCTCATCACTCCATCTGTGTCACCACCA
ACATTATTGCGACTCGAATTCACCCCATTTCCATGCCAACTAGAAACTGC
CACGATGGAACACCTGTGCACTCTCAACGACAAAACACTCCTCCCTATGA
TTTCAACCTCACCAGATGCAGAACCAGAATGGTTCGTAGAGGAAATGAGG
AAGACTATGGGACTGATGGCGAAAGGGATTGGACCAGGTCGTTTCCTCCC
TCAAATCTACGAAAGAGTAGCAGATGGAGAGGGATGGAAGTGGAGAAGAG
TA
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