mRNA_M-pyrifera_M_contig8139.19040.1 (mRNA) Macrocystis pyrifera P11B4 male
Overview
Homology
BLAST of mRNA_M-pyrifera_M_contig8139.19040.1 vs. uniprot
Match: D7G1T6_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G1T6_ECTSI) HSP 1 Score: 513 bits (1320), Expect = 3.680e-169 Identity = 323/600 (53.83%), Postives = 378/600 (63.00%), Query Frame = 1 Query: 1 MAWRPGPPPSPGLPTSDYDQRDPWTQRFISKTDGGELSLDVDAMNGLETAAGEVFVELIRQQAERPSSPVESPWSSWKPGQTSTGSGYLQHHPSAMRVESPMAQYKPFRCTYVSDPACVPQLRFANVSDTGADHHKRETTHHWRRAGRTWSRVPRFRKSEAAFKHAPDYKPPHAVGDKWYRTEAGPKLSLAGRVQESRWQSCHSMQSGREPRQPTRSRMPR---EPKRPQPGPASYNLQDPWEVKQVCGTVPKSSMFCEPVRRLRPRTTVFACPTSSSCEMSVDSSVATGTDEYGEDSIARRQSYHTRSVTASANQAATGRPLALSYPPTPTQRAGD----RTRVGTEMDRCYR--PGTKNPSAAGTATTPSAGGVG------AGARGRGEQRRRPPTVGPSSFARAERPNITDERRRQEDSYHSKAVRLLTGSGDVLVTVNRRRTSAWGTTTTLD--------------SAEPAPHLDRARTTAGKGSNXXXXXXXXXXXXXXXXXXRKGENRGESRGGDDAPLTPAGANTTTTTVSIRPSGVLTLQKSVFSNGTLEAEAIKLLPADLASAIPVYREPGRAQLPLIFRATSAPIVKSTP 1713 MAWRPGP S GL +S+YD+RDPW QRFISKTD GELSLDV+AMNGLETAAG +FVELIRQQAERP SP +S SSW PGQ Q HP+AMRV+ PMAQY+PFR TYVSDP+CVPQLRFANV DTGADH KRE + HWRR+GRTWSRVPRFRK E AF H P+YKPPHAV DKWY TEAGPK+SLAGRV+ESRWQSCHSMQSGREPR+PTRSR+P+ E RP PGPASY+++DPWEV++VCG VP S +FC+PVRR+ P+T+ FA SC+MSVD+S A G+D + +S ++ A+A AAT +S T A D RV R R G P GT T+P G A A R + R VGPSSFARAERP+I DE RR+E+SY K VRLLTG GDVLVTV RRR SAWG A +DR XXXXXXX K + G R D P T A T + P +LE+ A LLP DL ++ PVYREPG+++LP+IFRATSAPIV++ P Sbjct: 1 MAWRPGPRSSLGLGSSEYDERDPWIQRFISKTDDGELSLDVNAMNGLETAAGAIFVELIRQQAERPVSPADSTISSWMPGQDM--GRQRQRHPAAMRVDPPMAQYEPFRRTYVSDPSCVPQLRFANVPDTGADHDKREASRHWRRSGRTWSRVPRFRKGETAFTHDPNYKPPHAVVDKWYMTEAGPKVSLAGRVEESRWQSCHSMQSGREPRKPTRSRLPQDQQEKPRP-PGPASYHMRDPWEVREVCGAVPNSRVFCKPVRRVLPQTSAFAVAPGGSCDMSVDTSAAPPPSAAGDDENSAFRSDEPQARPATAGVAAT-----VSSATALTGAARDLPLHSRRVSRTQQRSARFGGGVGRP---GTKTSPGRHQSGNNLLPPAAAAVRAARARPAAAVGPSSFARAERPHIADEGRRKEESYGKKVVRLLTGDGDVLVTVTRRRASAWGDVEPXXXXXXXXXXXXXXXAGPRAATTIDRXXXXXXXXXXXXXXXXXAVGRGRNAPGGWKTSDGGSGR--DALPSTSAIRKRQPTAPGVHPPAT--------RESSLESRAKGLLPDDLTASPPVYREPGKSELPVIFRATSAPIVRAVP 579
BLAST of mRNA_M-pyrifera_M_contig8139.19040.1 vs. uniprot
Match: A0A6H5KSY3_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KSY3_9PHAE) HSP 1 Score: 71.6 bits (174), Expect = 1.240e-11 Identity = 37/55 (67.27%), Postives = 40/55 (72.73%), Query Frame = 1 Query: 1 MAWRPGPPPSPGLPTSDYDQRDPWTQRFISKTDGGELSLDVDAM---NGLETAAG 156 MAWRPGP S GL SDYD+RDPW QRFISKTD GELSLDV+ N + AAG Sbjct: 1 MAWRPGPRSSLGLGASDYDERDPWIQRFISKTDDGELSLDVNVSSRRNTMPCAAG 55 The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig8139.19040.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90) Total hits: 2
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_M-pyrifera_M_contig8139.19040.1 >prot_M-pyrifera_M_contig8139.19040.1 ID=prot_M-pyrifera_M_contig8139.19040.1|Name=mRNA_M-pyrifera_M_contig8139.19040.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=731bp MAWRPGPPPSPGLPTSDYDQRDPWTQRFISKTDGGELSLDVDAMNGLETAback to top mRNA from alignment at M-pyrifera_M_contig8139:3360..11718+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_M-pyrifera_M_contig8139.19040.1 ID=mRNA_M-pyrifera_M_contig8139.19040.1|Name=mRNA_M-pyrifera_M_contig8139.19040.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=8359bp|location=Sequence derived from alignment at M-pyrifera_M_contig8139:3360..11718+ (Macrocystis pyrifera P11B4 male)back to top Coding sequence (CDS) from alignment at M-pyrifera_M_contig8139:3360..11718+ >mRNA_M-pyrifera_M_contig8139.19040.1 ID=mRNA_M-pyrifera_M_contig8139.19040.1|Name=mRNA_M-pyrifera_M_contig8139.19040.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=4386bp|location=Sequence derived from alignment at M-pyrifera_M_contig8139:3360..11718+ (Macrocystis pyrifera P11B4 male)back to top |