mRNA_M-pyrifera_M_contig81385.19036.1 (mRNA) Macrocystis pyrifera P11B4 male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_M-pyrifera_M_contig81385.19036.1
Unique NamemRNA_M-pyrifera_M_contig81385.19036.1
TypemRNA
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Homology
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BLAST of mRNA_M-pyrifera_M_contig81385.19036.1 vs. uniprot
Match: A0A5A8CMD8_CAFRO (Protein kinase domain-containing protein n=2 Tax=Cafeteria roenbergensis TaxID=33653 RepID=A0A5A8CMD8_CAFRO)

HSP 1 Score: 153 bits (387), Expect = 2.770e-41
Identity = 83/157 (52.87%), Postives = 107/157 (68.15%), Query Frame = 1 
Query:   16 DVARGLCHLHAHRILHRDCKSHNILLDQYGGRLRAKLCDFGSVKVLEA-TPKERFTETGTSGYVAPEVLGAVEGVEGYSFEADVFSLGIVLWEIVAIDHKA-HPLVGLPPVRYCRQLEQGTRPPLPKHPAICPPEYAKIVNQCWSFHPKDRPTAKQV 480
            DVARGL HLHA   +HRD KSHN+LLD     LRAK+ DFG+ +++E       +T+TGT GYVAPE+LG ++GV+G     DVFSL +VLWE+VA D    +PL  L PV+YCR+LE+G RP     P + P EYA++  +CWSF P  RPTA +V
Sbjct:  333 DVARGLAHLHACGRVHRDLKSHNVLLDIGASGLRAKVGDFGTARLVEEWRATTAWTQTGTLGYVAPEMLGGIDGVDGRGPAVDVFSLAVVLWELVAEDPVGGNPLKMLAPVKYCRELERGLRPSF--LPGV-PDEYAEVTLRCWSFEPAARPTAAEV 486
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BLAST of mRNA_M-pyrifera_M_contig81385.19036.1 vs. uniprot
Match: A0A5A8C8G8_CAFRO (Protein kinase domain-containing protein n=1 Tax=Cafeteria roenbergensis TaxID=33653 RepID=A0A5A8C8G8_CAFRO)

HSP 1 Score: 153 bits (387), Expect = 3.300e-40
Identity = 83/157 (52.87%), Postives = 107/157 (68.15%), Query Frame = 1 
Query:   16 DVARGLCHLHAHRILHRDCKSHNILLDQYGGRLRAKLCDFGSVKVLEA-TPKERFTETGTSGYVAPEVLGAVEGVEGYSFEADVFSLGIVLWEIVAIDHKA-HPLVGLPPVRYCRQLEQGTRPPLPKHPAICPPEYAKIVNQCWSFHPKDRPTAKQV 480
            DVARGL HLHA   +HRD KSHN+LLD     LRAK+ DFG+ +++E       +T+TGT GYVAPE+LG ++GV+G     DVFSL +VLWE+VA D    +PL  L PV+YCR+LE+G RP     P + P EYA++  +CWSF P  RPTA +V
Sbjct:  689 DVARGLAHLHACGRVHRDLKSHNVLLDIGASGLRAKVGDFGTARLVEEWRATTAWTQTGTLGYVAPEMLGGIDGVDGRGPAVDVFSLAVVLWELVAEDPVGGNPLKMLAPVKYCRELERGLRPSF--LPGV-PDEYAEVTLRCWSFEPAARPTAAEV 842
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BLAST of mRNA_M-pyrifera_M_contig81385.19036.1 vs. uniprot
Match: X6LUT8_RETFI (Protein kinase domain-containing protein n=1 Tax=Reticulomyxa filosa TaxID=46433 RepID=X6LUT8_RETFI)

HSP 1 Score: 131 bits (329), Expect = 8.910e-36
Identity = 69/157 (43.95%), Postives = 96/157 (61.15%), Query Frame = 1 
Query:   10 AADVARGLCHLHAHRILHRDCKSHNILLDQYGGRLRAKLCDFGSVKVLEATPKERFTETGTSGYVAPEVLGAVEGVEGYSFEADVFSLGIVLWEIVAIDHKAHPLVGLPPVRYCRQLEQGTRPPLPKHPAICPPEYAKIVNQCWSFHPKDRPTAKQV 480
            A DVARG+ +LHA  I+HRD KSHN+LLD+     R K+ DFG+ K ++       TE GT GY+APEV+   +   GY  + DVFS G++LWE+ +   + + L GL    Y +Q+ QG RP +PK    CP E+  ++N CW + PK RPT  Q+
Sbjct:    2 ALDVARGMEYLHAQNIIHRDLKSHNLLLDE---EFRVKVTDFGTAKHVDRLTSA-MTEIGTLGYMAPEVIEPPQPY-GYDSKVDVFSYGVLLWEMYSRGKEENTLKGLGLGNYVKQVRQGIRPTIPKD---CPDEFRNLINSCWEYEPKTRPTFAQI 150
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BLAST of mRNA_M-pyrifera_M_contig81385.19036.1 vs. uniprot
Match: A0A8K1CHA3_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1CHA3_PYTOL)

HSP 1 Score: 125 bits (313), Expect = 3.230e-30
Identity = 69/156 (44.23%), Postives = 99/156 (63.46%), Query Frame = 1 
Query:   16 DVARGLCHLHAHRILHRDCKSHNILLDQYGGRLRAKLCDFGSVKVLEATPKERFTETGTSGYVAPEVLGAVEGVEGYSFEADVFSLGIVLWEIVAIDHKAHPLVGLPPVRYCRQ-LEQGTRPPLPKHPAICPPEYAKIVNQCWSFHPKDRPTAKQV 480
            D ARG+ +LH+ RI+HRD KSHN L+D      R K+ DFG  KVLE      FT+ GT+G+VAPEVL  ++   GY+F+AD +S  IV+WE+VA D   +P +G+ P+++  Q +  G RPPLP+      PEY  ++N CW  +  DRP+  ++
Sbjct:  698 DAARGIQYLHSKRIIHRDIKSHNFLVDD---DWRVKVADFGISKVLE-NDANAFTQCGTTGWVAPEVL--LDEDLGYTFKADNWSFAIVMWEMVA-DGNQNPFIGMAPIKFYNQTVHSGIRPPLPEG---VDPEYVGLINDCWHSNASDRPSFTEI 843
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BLAST of mRNA_M-pyrifera_M_contig81385.19036.1 vs. uniprot
Match: A0A2D4BG79_PYTIN (TKL/DRK protein kinase n=2 Tax=Pythium insidiosum TaxID=114742 RepID=A0A2D4BG79_PYTIN)

HSP 1 Score: 123 bits (308), Expect = 1.520e-29
Identity = 68/156 (43.59%), Postives = 99/156 (63.46%), Query Frame = 1 
Query:   16 DVARGLCHLHAHRILHRDCKSHNILLDQYGGRLRAKLCDFGSVKVLEATPKERFTETGTSGYVAPEVLGAVEGVEGYSFEADVFSLGIVLWEIVAIDHKAHPLVGLPPVRYCRQ-LEQGTRPPLPKHPAICPPEYAKIVNQCWSFHPKDRPTAKQV 480
            D ARG+ +LH+ RI+HRD KSHN L+D      R K+ DFG  KVLE      FT+ GT+G+VAPEVL  ++   GY+F+AD +S  IV+WE+VA   + +P +G+ P+++  Q +  G RPP P +      EYA ++N CW  +P DRP+  ++
Sbjct:  713 DAARGIQYLHSKRIIHRDIKSHNFLVDD---DWRVKVADFGISKVLE-NXANAFTQCGTTGWVAPEVL--LDEDLGYTFKADNWSFAIVMWEMVAXGMQ-NPFIGMAPIKFYNQTVNSGIRPPFPDN---VDSEYAVLINDCWHSNPSDRPSFTEI 858
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BLAST of mRNA_M-pyrifera_M_contig81385.19036.1 vs. uniprot
Match: X6N1B7_RETFI (LIM-type zinc finger-containing protein n=1 Tax=Reticulomyxa filosa TaxID=46433 RepID=X6N1B7_RETFI)

HSP 1 Score: 115 bits (289), Expect = 6.480e-29
Identity = 64/162 (39.51%), Postives = 93/162 (57.41%), Query Frame = 1 
Query:   10 AADVARGLCHLHAHRILHRDCKSHNI-----LLDQYGGRLRAKLCDFGSVKVLEATPKERFTETGTSGYVAPEVLGAVEGVEGYSFEADVFSLGIVLWEIVAIDHKAHPLVGLPPVRYCRQLEQGTRPPLPKHPAICPPEYAKIVNQCWSFHPKDRPTAKQV 480
            A DV+RG+ +LH+  I+HRD KSH +     LLD+     R K+ DFG+ K L+       TE GT GY+APEV+       GY  + DVFS G++LWE+     + + L  +    Y  +++QG RP   K P+ CP E+ K++N CW F P +RPT  ++
Sbjct:   66 ALDVSRGMEYLHSQNIIHRDLKSHKLNMEFLLLDE---EFRVKVTDFGTAKHLDLLTSA-MTEVGTMGYMAPEVIEPPRP-HGYDSKVDVFSYGVLLWEMYCRGREENTLKNIGFASYATKVKQGLRP---KIPSDCPEEFCKLINACWEFDPVNRPTFTEI 219
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BLAST of mRNA_M-pyrifera_M_contig81385.19036.1 vs. uniprot
Match: K3WK92_GLOUD (Uncharacterized protein n=1 Tax=Globisporangium ultimum (strain ATCC 200006 / CBS 805.95 / DAOM BR144) TaxID=431595 RepID=K3WK92_GLOUD)

HSP 1 Score: 121 bits (303), Expect = 7.150e-29
Identity = 65/156 (41.67%), Postives = 100/156 (64.10%), Query Frame = 1 
Query:   16 DVARGLCHLHAHRILHRDCKSHNILLDQYGGRLRAKLCDFGSVKVLEATPKERFTETGTSGYVAPEVLGAVEGVEGYSFEADVFSLGIVLWEIVAIDHKAHPLVGLPPVRYCRQ-LEQGTRPPLPKHPAICPPEYAKIVNQCWSFHPKDRPTAKQV 480
            D ARG+ +LH+ RI+HRD KSHN L+D      R K+ DFG  KVL+      FT+ GT+G+VAPEVL  ++   GY+F+AD +S  IV+WE++A D   +P +G+ P+++  Q +  G RPP+P+      P+Y  ++++CWS +  DRP+   +
Sbjct:  704 DAARGIQYLHSKRIIHRDIKSHNFLVDD---DWRVKVADFGISKVLDNDTA--FTQCGTTGWVAPEVL--LDEDLGYTFKADNWSFAIVMWEMIA-DGNQNPFIGMAPIKFYNQTIHSGIRPPIPEG---VEPDYVSLISECWSANADDRPSFDHI 848
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BLAST of mRNA_M-pyrifera_M_contig81385.19036.1 vs. uniprot
Match: T0SFK4_SAPDV (TKL/DRK protein kinase n=2 Tax=Saprolegnia TaxID=4769 RepID=T0SFK4_SAPDV)

HSP 1 Score: 119 bits (297), Expect = 4.590e-28
Identity = 67/152 (44.08%), Postives = 98/152 (64.47%), Query Frame = 1 
Query:   16 DVARGLCHLHAHRILHRDCKSHNILLDQYGGRLRAKLCDFGSVKVLEATPKERFTETGTSGYVAPEVLGAVEGVEGYSFEADVFSLGIVLWEIVAIDHKAHPLVGLPPVRYCRQ-LEQGTRPPLPKHPAICPPEYAKIVNQCWSFHPKDRPT 468
            D ARG+ +LHA+RI+HRD KSHN+L+D      RAK+ DFG  KVL+    + FT  GTSG+VAPEVL  ++   GY+F+AD +S  IV+WE++A  H+ +P +G+ PV++  Q + +G RP +        P YA ++ +CW   P  RP+
Sbjct:  706 DAARGIAYLHANRIIHRDIKSHNLLVDD---DWRAKVADFGISKVLDVGA-QAFTHCGTSGWVAPEVL--LDEDIGYTFKADNWSFAIVMWEMIAGAHE-NPFLGMAPVKFYHQTINKGLRPLIDD---TVDPAYASLIRECWDSDPPARPS 847
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BLAST of mRNA_M-pyrifera_M_contig81385.19036.1 vs. uniprot
Match: X6MY24_RETFI (LIM-type zinc finger-containing protein (Fragment) n=1 Tax=Reticulomyxa filosa TaxID=46433 RepID=X6MY24_RETFI)

HSP 1 Score: 118 bits (296), Expect = 6.210e-28
Identity = 66/165 (40.00%), Postives = 97/165 (58.79%), Query Frame = 1 
Query:   10 AADVARGLCHLHAHRILHRDCKSHN--------ILLDQYGGRLRAKLCDFGSVKVLEATPKERFTETGTSGYVAPEVLGAVEGVEGYSFEADVFSLGIVLWEIVAIDHKAHPLVGLPPVRYCRQLEQGTRPPLPKHPAICPPEYAKIVNQCWSFHPKDRPTAKQV 480
            A DVARG+ +LHA  I+HRD KSH         +LLD+     R K+ DFG+ K ++       TE GT GY+APEV+   +   GY  + DVFS G++LWE+ +   + + L G+    Y ++++ G RP +P   A CP E++K++N CW F PK+RPT   +
Sbjct:  669 ALDVARGMEYLHAQNIIHRDLKSHKFGLTFANILLLDE---EFRVKVTDFGTAKHVDKL-SSAMTEIGTLGYMAPEVIEPPQP-HGYDSKVDVFSYGVLLWEMFSRGTEENTLKGIGFGNYVKKVKIGVRPVIP---AYCPQEFSKLINACWEFDPKNRPTFADI 825
[Close]
BLAST of mRNA_M-pyrifera_M_contig81385.19036.1 vs. uniprot
Match: A0A1V9ZTR4_9STRA (Protein kinase n=1 Tax=Achlya hypogyna TaxID=1202772 RepID=A0A1V9ZTR4_9STRA)

HSP 1 Score: 118 bits (296), Expect = 6.230e-28
Identity = 66/156 (42.31%), Postives = 98/156 (62.82%), Query Frame = 1 
Query:   16 DVARGLCHLHAHRILHRDCKSHNILLDQYGGRLRAKLCDFGSVKVLEATPKERFTETGTSGYVAPEVLGAVEGVEGYSFEADVFSLGIVLWEIVAIDHKAHPLVGLPPVRYCRQ-LEQGTRPPLPKHPAICPPEYAKIVNQCWSFHPKDRPTAKQV 480
            D ARG+ +LHA+RI+HRD KSHN+L+D      R K+ DFG  KVL+    + FT  GTSG+VAPEVL  ++   GY+F+AD +S  IV+WE++A  H+ +P +G+ PV++  Q + +G RP +        P YA ++ +CW   P  RP+   +
Sbjct:  685 DAARGIAYLHANRIIHRDIKSHNLLVDD---DWRVKVADFGISKVLDVGA-QAFTHCGTSGWVAPEVL--LDEDIGYTFKADNWSFAIVMWEMIAGAHE-NPFLGMAPVKFYHQTINKGLRPEIDD---TVDPAYAALIRECWDSDPPARPSFSSI 830
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig81385.19036.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A5A8CMD8_CAFRO2.770e-4152.87Protein kinase domain-containing protein n=2 Tax=C... [more]
A0A5A8C8G8_CAFRO3.300e-4052.87Protein kinase domain-containing protein n=1 Tax=C... [more]
X6LUT8_RETFI8.910e-3643.95Protein kinase domain-containing protein n=1 Tax=R... [more]
A0A8K1CHA3_PYTOL3.230e-3044.23Uncharacterized protein n=1 Tax=Pythium oligandrum... [more]
A0A2D4BG79_PYTIN1.520e-2943.59TKL/DRK protein kinase n=2 Tax=Pythium insidiosum ... [more]
X6N1B7_RETFI6.480e-2939.51LIM-type zinc finger-containing protein n=1 Tax=Re... [more]
K3WK92_GLOUD7.150e-2941.67Uncharacterized protein n=1 Tax=Globisporangium ul... [more]
T0SFK4_SAPDV4.590e-2844.08TKL/DRK protein kinase n=2 Tax=Saprolegnia TaxID=4... [more]
X6MY24_RETFI6.210e-2840.00LIM-type zinc finger-containing protein (Fragment)... [more]
A0A1V9ZTR4_9STRA6.230e-2842.31Protein kinase n=1 Tax=Achlya hypogyna TaxID=12027... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig81385contigM-pyrifera_M_contig81385:441..920 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-19
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score121.7
Seed ortholog evalue3.1e-25
Seed eggNOG ortholog65071.PYU1_T005384
Hectar predicted targeting categoryother localisation
EggNOG free text desc.Protein kinase. Source PGD
EggNOG OGs1MA8K@121069,COG0515@1,KOG0192@2759
Ec32 ortholog descriptionAmino acid-binding ACT
Ec32 orthologEc-12_001120.1
COG Functional cat.T
Best tax levelPythiales
Best eggNOG OGNA|NA|NA
Exons1
Model size480
Cds size480
Stop0
Start1
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622816720.1756258-CDS-M-pyrifera_M_contig81385:440..9201622816720.1756258-CDS-M-pyrifera_M_contig81385:440..920Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig81385 441..920 -
1692278139.2993221-CDS-M-pyrifera_M_contig81385:440..9201692278139.2993221-CDS-M-pyrifera_M_contig81385:440..920Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig81385 441..920 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig81385.19036.1prot_M-pyrifera_M_contig81385.19036.1Macrocystis pyrifera P11B4 malepolypeptideM-pyrifera_M_contig81385 441..920 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_M-pyrifera_M_contig81385.19036.1

>prot_M-pyrifera_M_contig81385.19036.1 ID=prot_M-pyrifera_M_contig81385.19036.1|Name=mRNA_M-pyrifera_M_contig81385.19036.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=160bp
MCWAADVARGLCHLHAHRILHRDCKSHNILLDQYGGRLRAKLCDFGSVKV
LEATPKERFTETGTSGYVAPEVLGAVEGVEGYSFEADVFSLGIVLWEIVA
IDHKAHPLVGLPPVRYCRQLEQGTRPPLPKHPAICPPEYAKIVNQCWSFH
PKDRPTAKQV
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mRNA from alignment at M-pyrifera_M_contig81385:441..920-

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_M-pyrifera_M_contig81385.19036.1 ID=mRNA_M-pyrifera_M_contig81385.19036.1|Name=mRNA_M-pyrifera_M_contig81385.19036.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=480bp|location=Sequence derived from alignment at M-pyrifera_M_contig81385:441..920- (Macrocystis pyrifera P11B4 male)
ATGTGTTGGGCTGCGGATGTGGCTCGAGGGTTGTGTCACTTGCATGCGCA
TCGCATTCTGCATAGGGATTGCAAGAGCCACAACATTCTGCTGGACCAGT
ATGGGGGTCGATTGCGGGCGAAATTGTGCGATTTTGGAAGCGTCAAGGTG
TTGGAAGCGACGCCGAAAGAGAGGTTCACCGAAACGGGGACCAGTGGGTA
TGTTGCTCCAGAGGTGCTGGGAGCTGTGGAGGGCGTGGAAGGGTATTCGT
TTGAAGCCGACGTGTTTTCGCTGGGAATCGTGCTCTGGGAAATCGTCGCA
ATCGACCACAAAGCCCACCCACTCGTCGGATTGCCTCCCGTGCGCTACTG
CAGGCAGCTCGAGCAAGGCACGCGCCCGCCACTCCCAAAACACCCCGCCA
TCTGCCCTCCAGAGTACGCCAAAATCGTAAATCAGTGCTGGAGCTTCCAC
CCAAAAGACAGACCCACCGCCAAACAGGTC
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Coding sequence (CDS) from alignment at M-pyrifera_M_contig81385:441..920-

>mRNA_M-pyrifera_M_contig81385.19036.1 ID=mRNA_M-pyrifera_M_contig81385.19036.1|Name=mRNA_M-pyrifera_M_contig81385.19036.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=960bp|location=Sequence derived from alignment at M-pyrifera_M_contig81385:441..920- (Macrocystis pyrifera P11B4 male)
ATGTGTTGGGCTGCGGATGTGGCTCGAGGGTTGTGTCACTTGCATGCGCA
TCGCATTCTGCATAGGGATTGCAAGAGCCACAACATTCTGCTGGACCAGT
ATGGGGGTCGATTGCGGGCGAAATTGTGCGATTTTGGAAGCGTCAAGGTG
TTGGAAGCGACGCCGAAAGAGAGGTTCACCGAAACGGGGACCAGTGGGTA
TGTTGCTCCAGAGGTGCTGGGAGCTGTGGAGGGCGTGGAAGGGTATTCGT
TTGAAGCCGACGTGTTTTCGCTGGGAATCGTGCTCTGGGAAATCGTCGCA
ATCGACCACAAAGCCCACCCACTCGTCGGATTGCCTCCCGTGCGCTACTG
CAGGCAGCTCGAGCAAGGCACGCGCCCGCCACTCCCAAAACACCCCGCCA
TCTGCCCTCCAGAGTACGCCAAAATCGTAAATCAGTGCTGGAGCTTCCAC
CCAAAAGACAGACCCACCGCCAAACAGGTCATGTGTTGGGCTGCGGATGT
GGCTCGAGGGTTGTGTCACTTGCATGCGCATCGCATTCTGCATAGGGATT
GCAAGAGCCACAACATTCTGCTGGACCAGTATGGGGGTCGATTGCGGGCG
AAATTGTGCGATTTTGGAAGCGTCAAGGTGTTGGAAGCGACGCCGAAAGA
GAGGTTCACCGAAACGGGGACCAGTGGGTATGTTGCTCCAGAGGTGCTGG
GAGCTGTGGAGGGCGTGGAAGGGTATTCGTTTGAAGCCGACGTGTTTTCG
CTGGGAATCGTGCTCTGGGAAATCGTCGCAATCGACCACAAAGCCCACCC
ACTCGTCGGATTGCCTCCCGTGCGCTACTGCAGGCAGCTCGAGCAAGGCA
CGCGCCCGCCACTCCCAAAACACCCCGCCATCTGCCCTCCAGAGTACGCC
AAAATCGTAAATCAGTGCTGGAGCTTCCACCCAAAAGACAGACCCACCGC
CAAACAGGTC
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