mRNA_M-pyrifera_M_contig8137.19030.1 (mRNA) Macrocystis pyrifera P11B4 male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_M-pyrifera_M_contig8137.19030.1
Unique NamemRNA_M-pyrifera_M_contig8137.19030.1
TypemRNA
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Homology
[Close]
BLAST of mRNA_M-pyrifera_M_contig8137.19030.1 vs. uniprot
Match: D8LNZ7_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LNZ7_ECTSI)

HSP 1 Score: 461 bits (1187), Expect = 7.000e-150
Identity = 370/708 (52.26%), Postives = 456/708 (64.41%), Query Frame = 1 
Query:    1 MSGARDTGRGA-LFSQDVLRQLDKENVNTTNVPAGLGRTPDRRR------------GKANAGFKVFQAEGDESRPSTFKKDRPPSQLEADLSLAKSEAAKYKEEFRLAQRALDGRNERVRDLKSTTASTNLRYTALLKSHEEVNKEVGLLRTQLVNGGG--GDGNVERLKARIENLETNNELLREERSSLETRLAKREAAMANTKADLAAAAQRESALCAEAKGLREELDEALRDATARADAQNQVASGTGAGQAQWALEKASLDAQIGELEAQLSASGHRCASAAAERAVLAEEATRRENEHNSAVAALQDELRSLHRRTSADLGDWQRRHREAVGARKAVEGQLERLVGASKSVALVAEKQAALEASLQEACGLLSKAVLAESAGIDGGAVALGPDSTERVVEGVLENILGGVFERVKEAGAREEDEEEEE--------------ATAMLGV-MEELSAKMASLREFRAAEADVYLERAQSLEAELENVCGRHAEAVAELEAARGIAENEVAQLTRRMNDGDGERKDLELRLNSAAQELATTVQLSELALAARVSAAEDERQEXXXXXXXXXXXXXXXXXXXXXXXXXXLDLVRRDCAGKVDAVEEENRSLQDKLEGLSAQALELKERADASVQMPPDAGVSAEDWAAREKELLEMEARLVAVVAQNNELERTIEASSASASAAGERLPPSPGKEERQAKIVALES 2034
            M GARD G G  LFS  VL+QLDKENV   N PA   RTPDRRR              A  GFKVFQ +G+ S   T    +  SQL  DLS A+SE A+ KEE R A+RALD RNE V  LK++ A+T  RYTALL+SHEE NKE+ LLRTQ ++  G  G G VE+L+A +ENLETNNELLREER SL+TRLAKR+AA++  KADLAAA QR+ AL  +A  LREELD A              AS  GA QAQW L+K +L+A+IGELE Q ++SG RC    AER +LAEE+ RRE EH S VA+L+ E++ LHRRT+ADLGDW++R+R+ VGA++A+EGQLERLV AS+SV  V EK A LEASLQEA GLLS+AVLAE  G              RVVEGVLE++LG VF+    +G  EE+ E+EE              A+  LG  +E+L+A M +LR F   EA  +LE+A+SLE ELE V  +HA +V++LEAAR  +E EV +L   +  G GER++L+LRL +AA EL   V                    XXXXXXXXXXXXXXXXXXXXXXXXXX    RR  A K +A+E ENR+L +KLEGL+ QA  LK +A A     P + VS  DW A+++EL EMEARL  VV++N ELER +E   A    A      S G EERQA++ ALE+
Sbjct:    1 MPGARDAGSGGGLFSPGVLQQLDKENV--VNTPA---RTPDRRRKLGSAIRGTSSAAAAGVGFKVFQQQGEAS-TRTSVAGQEASQLATDLSRAESELARLKEEARQARRALDERNEMVEQLKASKANTKQRYTALLQSHEEANKELELLRTQKLDSSGDSGSGIVEQLRATVENLETNNELLREERGSLQTRLAKRDAAVSAMKADLAAATQRDDALRQKADRLREELDAAA------------AASKAGA-QAQWDLDKEALEARIGELETQAASSGRRCVELVAERDLLAEESARREKEHASTVASLRSEMQGLHRRTTADLGDWRQRYRQEVGAKRALEGQLERLVAASESVTRVIEKHAVLEASLQEAYGLLSQAVLAEERGXX-----XXXXXAARVVEGVLEHLLGRVFQATATSGDEEEEGEDEEGRKEREADRRLSKEASDNLGEELEKLTADMEALRSFGLDEAHTFLEQAKSLETELEAVREKHAASVSDLEAARAHSEREVERLAGMLERGQGEREELKLRLETAANELVINVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRRAYAQKAEAMEGENRALHEKLEGLATQASALKAKAAAREATSPPS-VSVTDWEAKQQELEEMEARLSTVVSKNQELERKVETVKAEGQEA------SLGSEERQAQVAALEA 677
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig8137.19030.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D8LNZ7_ECTSI7.000e-15052.26Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig8137contigM-pyrifera_M_contig8137:761..6656 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-19
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Properties
Property NameValue
Hectar predicted targeting categoryother localisation
Ec32 ortholog descriptionexpressed unknown protein
Ec32 orthologEc-01_000560.1
Exons7
Model size2043
Cds size2043
Stop0
Start1
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622816719.8750718-CDS-M-pyrifera_M_contig8137:760..20591622816719.8750718-CDS-M-pyrifera_M_contig8137:760..2059Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig8137 761..2059 +
1692278139.133314-CDS-M-pyrifera_M_contig8137:760..20591692278139.133314-CDS-M-pyrifera_M_contig8137:760..2059Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig8137 761..2059 +
1622816719.88583-CDS-M-pyrifera_M_contig8137:2822..28881622816719.88583-CDS-M-pyrifera_M_contig8137:2822..2888Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig8137 2823..2888 +
1692278139.147065-CDS-M-pyrifera_M_contig8137:2822..28881692278139.147065-CDS-M-pyrifera_M_contig8137:2822..2888Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig8137 2823..2888 +
1622816719.897331-CDS-M-pyrifera_M_contig8137:3643..39311622816719.897331-CDS-M-pyrifera_M_contig8137:3643..3931Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig8137 3644..3931 +
1692278139.1578698-CDS-M-pyrifera_M_contig8137:3643..39311692278139.1578698-CDS-M-pyrifera_M_contig8137:3643..3931Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig8137 3644..3931 +
1622816719.907743-CDS-M-pyrifera_M_contig8137:4573..46511622816719.907743-CDS-M-pyrifera_M_contig8137:4573..4651Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig8137 4574..4651 +
1692278139.1700191-CDS-M-pyrifera_M_contig8137:4573..46511692278139.1700191-CDS-M-pyrifera_M_contig8137:4573..4651Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig8137 4574..4651 +
1622816719.9202764-CDS-M-pyrifera_M_contig8137:5448..55281622816719.9202764-CDS-M-pyrifera_M_contig8137:5448..5528Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig8137 5449..5528 +
1692278139.1793807-CDS-M-pyrifera_M_contig8137:5448..55281692278139.1793807-CDS-M-pyrifera_M_contig8137:5448..5528Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig8137 5449..5528 +
1622816719.9339232-CDS-M-pyrifera_M_contig8137:6021..61271622816719.9339232-CDS-M-pyrifera_M_contig8137:6021..6127Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig8137 6022..6127 +
1692278139.1884763-CDS-M-pyrifera_M_contig8137:6021..61271692278139.1884763-CDS-M-pyrifera_M_contig8137:6021..6127Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig8137 6022..6127 +
1622816719.9445248-CDS-M-pyrifera_M_contig8137:6530..66561622816719.9445248-CDS-M-pyrifera_M_contig8137:6530..6656Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig8137 6531..6656 +
1692278139.1975462-CDS-M-pyrifera_M_contig8137:6530..66561692278139.1975462-CDS-M-pyrifera_M_contig8137:6530..6656Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig8137 6531..6656 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig8137.19030.1prot_M-pyrifera_M_contig8137.19030.1Macrocystis pyrifera P11B4 malepolypeptideM-pyrifera_M_contig8137 761..6656 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_M-pyrifera_M_contig8137.19030.1

>prot_M-pyrifera_M_contig8137.19030.1 ID=prot_M-pyrifera_M_contig8137.19030.1|Name=mRNA_M-pyrifera_M_contig8137.19030.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=681bp
MSGARDTGRGALFSQDVLRQLDKENVNTTNVPAGLGRTPDRRRGKANAGF
KVFQAEGDESRPSTFKKDRPPSQLEADLSLAKSEAAKYKEEFRLAQRALD
GRNERVRDLKSTTASTNLRYTALLKSHEEVNKEVGLLRTQLVNGGGGDGN
VERLKARIENLETNNELLREERSSLETRLAKREAAMANTKADLAAAAQRE
SALCAEAKGLREELDEALRDATARADAQNQVASGTGAGQAQWALEKASLD
AQIGELEAQLSASGHRCASAAAERAVLAEEATRRENEHNSAVAALQDELR
SLHRRTSADLGDWQRRHREAVGARKAVEGQLERLVGASKSVALVAEKQAA
LEASLQEACGLLSKAVLAESAGIDGGAVALGPDSTERVVEGVLENILGGV
FERVKEAGAREEDEEEEEATAMLGVMEELSAKMASLREFRAAEADVYLER
AQSLEAELENVCGRHAEAVAELEAARGIAENEVAQLTRRMNDGDGERKDL
ELRLNSAAQELATTVQLSELALAARVSAAEDERQEKERRLEAEKTRLAEE
LEAQDKAKLEELDLVRRDCAGKVDAVEEENRSLQDKLEGLSAQALELKER
ADASVQMPPDAGVSAEDWAAREKELLEMEARLVAVVAQNNELERTIEASS
ASASAAGERLPPSPGKEERQAKIVALESEVN
back to top

mRNA from alignment at M-pyrifera_M_contig8137:761..6656+

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_M-pyrifera_M_contig8137.19030.1 ID=mRNA_M-pyrifera_M_contig8137.19030.1|Name=mRNA_M-pyrifera_M_contig8137.19030.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=5896bp|location=Sequence derived from alignment at M-pyrifera_M_contig8137:761..6656+ (Macrocystis pyrifera P11B4 male)
ATGTCGGGAGCAAGAGATACTGGGCGTGGAGCTCTGTTCTCGCAGGATGT
TCTCCGCCAACTGGACAAGGAAAACGTCAACACGACCAACGTGCCGGCCG
GACTAGGACGAACGCCCGACAGGAGGCGAGGCAAGGCCAACGCCGGGTTC
AAGGTCTTCCAAGCCGAAGGCGATGAGAGTCGCCCGTCGACATTCAAGAA
GGACAGGCCTCCTTCGCAGCTGGAGGCCGATCTTTCGCTCGCTAAGTCGG
AGGCGGCCAAGTATAAGGAGGAATTTCGACTGGCCCAGCGAGCTCTTGAT
GGCCGGAACGAGCGTGTTCGCGACCTGAAATCCACGACGGCCTCCACGAA
CTTACGATATACGGCTTTGCTCAAGAGCCACGAGGAGGTAAACAAGGAAG
TCGGCCTGTTGCGCACCCAGCTTGTGAACGGTGGCGGTGGGGATGGAAAT
GTCGAGCGGCTCAAAGCTCGAATCGAAAACCTCGAAACGAACAACGAGCT
GTTACGAGAAGAGCGGAGCTCGCTTGAGACGCGGTTGGCGAAGCGAGAGG
CGGCGATGGCGAACACAAAGGCCGACCTCGCAGCCGCCGCGCAACGAGAA
AGCGCTCTTTGCGCAGAAGCCAAGGGCTTGCGGGAGGAGCTGGACGAAGC
TCTGCGCGACGCAACCGCCCGAGCTGACGCACAGAACCAAGTAGCCTCCG
GTACCGGGGCAGGTCAAGCGCAGTGGGCCCTCGAGAAGGCCTCTCTCGAC
GCCCAGATCGGCGAGCTCGAGGCGCAGCTGTCGGCGTCAGGGCACAGGTG
CGCCTCAGCAGCGGCGGAGCGCGCCGTCCTTGCCGAGGAGGCAACACGGC
GCGAAAACGAACACAACTCTGCGGTAGCCGCGCTGCAGGACGAGCTTCGG
TCGCTGCACCGCAGAACCTCGGCCGACCTAGGGGACTGGCAGCGGCGGCA
TCGGGAAGCGGTGGGAGCGAGGAAAGCCGTGGAGGGACAGCTCGAGCGAC
TTGTCGGCGCGAGCAAATCTGTCGCCCTCGTCGCGGAGAAGCAAGCCGCC
TTGGAGGCGTCCCTGCAAGAGGCCTGCGGGCTGCTGTCTAAGGCGGTGCT
CGCGGAGAGTGCGGGGATTGATGGGGGGGCGGTTGCGCTGGGTCCGGACT
CGACTGAAAGGGTAGTGGAAGGGGTGCTTGAGAACATTTTGGGAGGCGTT
TTCGAGCGGGTCAAGGAGGCCGGAGCGAGGGAGGAGGACGAGGAGGAAGA
AGAGGCGACAGCGATGCTGGGGGTCATGGAGGAGCTTTCGGCGAAAATGG
TACGCCCATTCATCAAGTTTATATTCATGTATCCCGGTATATCGTATATA
GCATGTCGGCGAGGTCAGCGACGTACTCGTACAAGCAGCAGCAGTACTAT
ACTACTGCTGTAAAGTACTGGTATTAATGGTATACGTACTGCTGTAGGAC
CAGGTGCAACCCCGTCGGTGCGGTTTGGAAAGTGTAAGTTTTGAGGATGC
CCGTCCAGACCTTTTCCGATCCCGGCAGTTCCTCCATGGCCCAGACGGCA
GTAATCATGCGCTAGGTATTCGGAGACAGTAAGTCGGTGTCTTTCAATGC
TTGGCGTCGGAGATTGGCGGCGTTCGAGCACTAACTGTAGAGTACCGGTA
TAAGGTGCCTGGTATAATATCAGGTAGGTTTACTCTATCTTCGTACGAGT
CCAAGAGAGCGGGTATTCCACCCTCGACGAGTTGCGCTGTATGTTTCCCC
CAACTCGGCGGCCGAACTTACGATCGCTGGCAGTACAGATCCAACCCAGG
AAATATGCGCTAGATCATGCAGACTACCAGGGTATATGACTCCCACCCGG
CAACATGAGCTAAGTCATACAGATCATAAAGATCAGGGGTGTATCTGCCC
TAAAAGATCTAGATCATCAAGTGGGAATCGATTATCGGTCCGAAAGATTC
GACGGGAGACCGTAACCCTCGACCCTCGCTGTGATTCGCTGCTGCAAAAC
CGTTGCCGTCGTTGCCGTCGTCCCCGATGGCACCACCTCTGTGCTCGTGC
CACGCGTTTTAGGCAAGTCTGCGAGAGTTTCGTGCAGCCGAGGCTGACGT
ATATCTGGAGAGAGCCCAGTCGCTGGAGGTGAGGGGATGATCCCGTTGTT
TGACGTTTTCTCCGGCTTGCCTTGACCTTTTTCACTGCTGCATAACGTTC
TTCAACTCTGAATTCAAGACCTTTGTCCCCGAATATACGGTAGGTATTAG
TAGCGCACTTGTAAAGGGGTTCAACTTGATACGGCAGCAGTTTGCCGGTA
GTAGCTGTACATCAGCTTTGCAGCAGCTTTGCAGCAGTAGCGTTTGTGCG
AGTTCTGTTCTGCTGATGAACAATTGTCGTTCTCTTACGGCAGAACGTAT
ATACTGTACGACGAGATGAAATACTGGTACGTACGGTAGTTTTTTTGTAT
TGATGTCGGCAGAGCGACGGAACGACCGAGCGGCAACCTCGAATCTCGAA
CGAAACAAGCTTACCCGACTACCAGTTCCGTCGAGGGCTTGATCGCAACG
CATCGTGCAGAAGAACTCCCGTCCCTTGCCTTTCCCGTCGCAGAGAATAG
TAATACCGTGCCTGACCCGAGGCACCACTGTTTTTAGCCTGCTCCGCTCG
CTATCGACCTTAACCTCTTTAGGACTACACTCCCTGGAGCACAAACTCCT
TGAATTTTGACTATTCATATTGATAAAATGTTTCTTCTGTTCACTTTGGT
AGTAAAATGTTGAACCTCTTTCGAATTGCTCCCACGTTTGAGGGCTCACA
CTACTTGGAATTGGTGTAGGATCACTTTGCTGTTCTAGAAGGGTTGAATT
AAAAACGCCGGCCGACCGACTTGCACCCAACAGGCGGAGCTGGAGAACGT
TTGCGGGCGGCACGCGGAAGCAGTGGCTGAGCTCGAAGCAGCGCGCGGCA
TAGCTGAAAACGAGGTGGCGCAACTAACGCGGAGGATGAACGACGGAGAC
GGCGAGCGCAAGGATCTCGAGCTGCGGCTAAACTCGGCGGCTCAGGAGCT
GGCCACGACGGTGCAGCTCTCTGAGCTTGCCCTGGCTGCGAGGGTGTCGG
CTGCGGAAGACGAGCGGCAGGAGAAGGAGAGAAGGCTCGAGGCGGAGAAG
ACGCGTCTTGCAGAAGAGCTGGTAGGTCGCGTGGTGTTGTTGGTGCTATC
TACAATCGTATCTGTGGACGACGTACATACCTGGTTTTGTGTTTTTTTTT
TGGTGAGGGCGGGGTTTTTGAGACTACTTGCGGTGGGATGCACAATTTTT
GGACCCCATCGGCCGTAAGGTTTGGTCCGAGCGTGCGTCAGAAGATGCGT
TTGGGAGATAGTTTTTGGCGTTGCCGAGCGGGAAGCATGGCCTCCCGCGG
CCCCGCGTGCTTCATTCAGACATGATGTTATCAATCGAAAACACGAAAAT
GGCGGTTACAAGTTGTGGCACTGCTGTAGATTCAACTCGTTGTGTTTGGT
CGAGAACGGGTTCTGCTGAAGGTACTCTTGACTCTATCGGTCCAATGGCT
TCATCATATGCTTGTTCACACGATTTTCTCTCTCTGGCGCGACAATTTTT
CCTGCCGGAATATTGGAAAGCTTGGCTTCACGTACGGCTTGTGTGGGCAC
CGGGCACGCGCACCGTCTCCGAGGAATTTCCGTTATGCGACGGGTTCAGC
GGTACTCAGTCTACGGTCGGTCACCCCGTCTTTTGGCGCTCTCCTGATTG
GTGTCTGTCTCCCCTCCTTTTGTCTCTCTTCTCGATTGATCTCTGGTGCC
CCGTGGGGTATAGGAAGCTCAGGACAAGGCGAAGCTTGAGGAGCTCGATT
TGGTGCGTCGCGACTGCGCGGGAAAGGTGGATGCCGTGGAGGTAAGCAAT
GCCGTACAAATCGCCCCACTGGAGCGTGTTGTGGCCGATGCCAGCGGCGG
TCATGGGACAGTCTGGCAACTACTCCTGGTGAAAGATTCAAGTAAACTGG
TATTTTCAGGCCCGCCAAGACTTCTTTCGTCCTTGATTCCTGGTGACATG
TATCCACCTCTCTGGTCTACGGTAGAGTATATTGTCCCTTTGGACTCTGA
TGTGGGTATAAAACATTGCTTGTATTCACGGCCACAGTGGTATGTGATAC
AGTGGCGTAGAGAGACGGTCAGGTCAGTCAAGGGGTCAACTCGCGGTCTC
CTCCTCCTCCTCCTATAATAGCACATTTTGCTCCTGGAGGGAGTTCGGCA
AGCAGGCGGGCCGGTTCTTCACCGCGATGACGGCGCTCAACGAACAGCCG
TGTTTGTCACTGTCAAGGTCTCTCAACCGGATACGACAGAGAGATGACAC
TAGGCGACCCACGGCAGTTGGTTGATTGTGGTGTGTTTATCGTGATGACT
GGCCACTCCTATCTTTTTTCTTGTGCGATCGTCGTCACCAGCGAGGCCTG
ACACGTGCACAGAACCCGGCGCAAGCGTCTTCATCACCCTAGATAGTCTC
TTTTCTCGACTATCTTTTCTCGGCCGGAGCCCAGGGTAGGCATTACCACC
CTGGGGGGTCACTTTATCGTCTACCTATTATCTCTTTCCCCGCACTCCGC
ACTGATGGTTTAGTTACCTGCCCGAACTCCTTCGCGACCTCGGAGACATA
TTTGACAGCAGCACCGCCGGTTGCTATGCTGCTCGCAGGAAGAAAACCGA
TCTCTGCAGGACAAGTTGGAGGGGCTGTCCGCGCAAGCGTTGGAGCTGAA
GGAAAGAGCCGACGCGAGGTGAGCCAAAGGATGCTGTGACGATGTTGTCC
GTGACTCCTTTTTTTTCCTACCGCAATACTATGCCACAGCAAGGCTGATT
CAGATCACGACCATTTCACAGCAATACTGATTTGCAGCTATGACAAGCCA
CGGCAACAGCAATACTAGTTCACAGTAGAAATATCCCACAGCAGTGGTTA
TCGAAGTACCGGTAGATGCTCTTGCCGCCTCTCAAGAGGGAAGCGAGCGG
CATGATCACCCTCGTCAGTCGTTCCGGTTGGTTGTTCAGAAAAAAACAAA
TCGTACGTTTGGTTGTTTGATGTTTCTAGCGGAAGACGTCAAAGCCGTCA
GCTGCTCTTGCTTGTGGTCTAGTCTACATCTCTGTTTGGAGCGCGCACAA
CCATTATGTTATCTCGCTTGGGATACCCTGATGATACCCCACCAAATCTG
ATCCCACCCGAACCTGAATCTTCCATTTTGTCTTCATTTTTTTCACCAAC
GGTTTCATAAGTGTGCAAATGCCGCCAGACGCCGGCGTTTCAGCCGAAGA
TTGGGCGGCGAGAGAGAAGGAGCTGCTGGAAATGGAGGCCCGTCTTGTCG
CCGTAGTGGCGCAGAACGTGAGTTCCCATGGACTATGTTTTGATGGTTGG
ATTGGGAGCGTTGTGTGATGACTTTGAGGTGGAGAGCATCGCAATGCGCG
CCCTGATGAATTTTCTTGATTCTCCCCGTCTCAACCGGGTGCCGCGGAAT
TTGTGCCGATGTTGGTGCAGTAGCGCCGTCGTAGATTGTGCGGAATAGGA
CAAGCGGCTTCTCTGTGCGATAGGAGCGCTGTTACGAGAAAGAGCGCTTG
AATGGGGAGAGATAATAATGGTATTCGTGTCCGTCCTTGGTAAACCGAAT
CGAGCTCAAACCCAACCAAACCATACCAAACCTAATCAAACCAAACCAAA
CCCAATCAAACCATAATACCAAACCAAAACAACCCAAACTGCACTGGGGC
GGTTGGTTGTGCCGCCTCAGAACGAGCTTGAGAGAACGATCGAAGCGTCT
TCTGCCTCTGCTTCTGCTGCGGGAGAGCGACTGCCTCCTTCCCCTGGCAA
GGAGGAGCGGCAGGCCAAGATTGTGGCGCTTGAATCGGAGGTAAAT
back to top

Coding sequence (CDS) from alignment at M-pyrifera_M_contig8137:761..6656+

>mRNA_M-pyrifera_M_contig8137.19030.1 ID=mRNA_M-pyrifera_M_contig8137.19030.1|Name=mRNA_M-pyrifera_M_contig8137.19030.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=4086bp|location=Sequence derived from alignment at M-pyrifera_M_contig8137:761..6656+ (Macrocystis pyrifera P11B4 male)
ATGTCGGGAGCAAGAGATACTGGGCGTGGAGCTCTGTTCTCGCAGGATGT
TCTCCGCCAACTGGACAAGGAAAACGTCAACACGACCAACGTGCCGGCCG
GACTAGGACGAACGCCCGACAGGAGGCGAGGCAAGGCCAACGCCGGGTTC
AAGGTCTTCCAAGCCGAAGGCGATGAGAGTCGCCCGTCGACATTCAAGAA
GGACAGGCCTCCTTCGCAGCTGGAGGCCGATCTTTCGCTCGCTAAGTCGG
AGGCGGCCAAGTATAAGGAGGAATTTCGACTGGCCCAGCGAGCTCTTGAT
GGCCGGAACGAGCGTGTTCGCGACCTGAAATCCACGACGGCCTCCACGAA
CTTACGATATACGGCTTTGCTCAAGAGCCACGAGGAGGTAAACAAGGAAG
TCGGCCTGTTGCGCACCCAGCTTGTGAACGGTGGCGGTGGGGATGGAAAT
GTCGAGCGGCTCAAAGCTCGAATCGAAAACCTCGAAACGAACAACGAGCT
GTTACGAGAAGAGCGGAGCTCGCTTGAGACGCGGTTGGCGAAGCGAGAGG
CGGCGATGGCGAACACAAAGGCCGACCTCGCAGCCGCCGCGCAACGAGAA
AGCGCTCTTTGCGCAGAAGCCAAGGGCTTGCGGGAGGAGCTGGACGAAGC
TCTGCGCGACGCAACCGCCCGAGCTGACGCACAGAACCAAGTAGCCTCCG
GTACCGGGGCAGGTCAAGCGCAGTGGGCCCTCGAGAAGGCCTCTCTCGAC
GCCCAGATCGGCGAGCTCGAGGCGCAGCTGTCGGCGTCAGGGCACAGGTG
CGCCTCAGCAGCGGCGGAGCGCGCCGTCCTTGCCGAGGAGGCAACACGGC
GCGAAAACGAACACAACTCTGCGGTAGCCGCGCTGCAGGACGAGCTTCGG
TCGCTGCACCGCAGAACCTCGGCCGACCTAGGGGACTGGCAGCGGCGGCA
TCGGGAAGCGGTGGGAGCGAGGAAAGCCGTGGAGGGACAGCTCGAGCGAC
TTGTCGGCGCGAGCAAATCTGTCGCCCTCGTCGCGGAGAAGCAAGCCGCC
TTGGAGGCGTCCCTGCAAGAGGCCTGCGGGCTGCTGTCTAAGGCGGTGCT
CGCGGAGAGTGCGGGGATTGATGGGGGGGCGGTTGCGCTGGGTCCGGACT
CGACTGAAAGGGTAGTGGAAGGGGTGCTTGAGAACATTTTGGGAGGCGTT
TTCGAGCGGGTCAAGGAGGCCGGAGCGAGGGAGGAGGACGAGGAGGAAGA
AGAGGCGACAGCGATGCTGGGGGTCATGGAGGAGCTTTCGGCGAAAATGA
TGTCGGGAGCAAGAGATACTGGGCGTGGAGCTCTGTTCTCGCAGGATGTT
CTCCGCCAACTGGACAAGGAAAACGTCAACACGACCAACGTGCCGGCCGG
ACTAGGACGAACGCCCGACAGGAGGCGAGGCAAGGCCAACGCCGGGTTCA
AGGTCTTCCAAGCCGAAGGCGATGAGAGTCGCCCGTCGACATTCAAGAAG
GACAGGCCTCCTTCGCAGCTGGAGGCCGATCTTTCGCTCGCTAAGTCGGA
GGCGGCCAAGTATAAGGAGGAATTTCGACTGGCCCAGCGAGCTCTTGATG
GCCGGAACGAGCGTGTTCGCGACCTGAAATCCACGACGGCCTCCACGAAC
TTACGATATACGGCTTTGCTCAAGAGCCACGAGGAGGTAAACAAGGAAGT
CGGCCTGTTGCGCACCCAGCTTGTGAACGGTGGCGGTGGGGATGGAAATG
TCGAGCGGCTCAAAGCTCGAATCGAAAACCTCGAAACGAACAACGAGCTG
TTACGAGAAGAGCGGAGCTCGCTTGAGACGCGGTTGGCGAAGCGAGAGGC
GGCGATGGCGAACACAAAGGCCGACCTCGCAGCCGCCGCGCAACGAGAAA
GCGCTCTTTGCGCAGAAGCCAAGGGCTTGCGGGAGGAGCTGGACGAAGCT
CTGCGCGACGCAACCGCCCGAGCTGACGCACAGAACCAAGTAGCCTCCGG
TACCGGGGCAGGTCAAGCGCAGTGGGCCCTCGAGAAGGCCTCTCTCGACG
CCCAGATCGGCGAGCTCGAGGCGCAGCTGTCGGCGTCAGGGCACAGGTGC
GCCTCAGCAGCGGCGGAGCGCGCCGTCCTTGCCGAGGAGGCAACACGGCG
CGAAAACGAACACAACTCTGCGGTAGCCGCGCTGCAGGACGAGCTTCGGT
CGCTGCACCGCAGAACCTCGGCCGACCTAGGGGACTGGCAGCGGCGGCAT
CGGGAAGCGGTGGGAGCGAGGAAAGCCGTGGAGGGACAGCTCGAGCGACT
TGTCGGCGCGAGCAAATCTGTCGCCCTCGTCGCGGAGAAGCAAGCCGCCT
TGGAGGCGTCCCTGCAAGAGGCCTGCGGGCTGCTGTCTAAGGCGGTGCTC
GCGGAGAGTGCGGGGATTGATGGGGGGGCGGTTGCGCTGGGTCCGGACTC
GACTGAAAGGGTAGTGGAAGGGGTGCTTGAGAACATTTTGGGAGGCGTTT
TCGAGCGGGTCAAGGAGGCCGGAGCGAGGGAGGAGGACGAGGAGGAAGAA
GAGGCGACAGCGATGCTGGGGGTCATGGAGGAGCTTTCGGCGAAAATGGC
AAGTCTGCGAGAGTTTCGTGCAGCCGAGGCTGACGTATATCTGGAGAGAG
CCCAGTCGCTGGAGGCAAGTCTGCGAGAGTTTCGTGCAGCCGAGGCTGAC
GTATATCTGGAGAGAGCCCAGTCGCTGGAGGCGGAGCTGGAGAACGTTTG
CGGGCGGCACGCGGAAGCAGTGGCTGAGCTCGAAGCAGCGCGCGGCATAG
CTGAAAACGAGGTGGCGCAACTAACGCGGAGGATGAACGACGGAGACGGC
GAGCGCAAGGATCTCGAGCTGCGGCTAAACTCGGCGGCTCAGGAGCTGGC
CACGACGGTGCAGCTCTCTGAGCTTGCCCTGGCTGCGAGGGTGTCGGCTG
CGGAAGACGAGCGGCAGGAGAAGGAGAGAAGGCTCGAGGCGGAGAAGACG
CGTCTTGCAGAAGAGCTGGCGGAGCTGGAGAACGTTTGCGGGCGGCACGC
GGAAGCAGTGGCTGAGCTCGAAGCAGCGCGCGGCATAGCTGAAAACGAGG
TGGCGCAACTAACGCGGAGGATGAACGACGGAGACGGCGAGCGCAAGGAT
CTCGAGCTGCGGCTAAACTCGGCGGCTCAGGAGCTGGCCACGACGGTGCA
GCTCTCTGAGCTTGCCCTGGCTGCGAGGGTGTCGGCTGCGGAAGACGAGC
GGCAGGAGAAGGAGAGAAGGCTCGAGGCGGAGAAGACGCGTCTTGCAGAA
GAGCTGGAAGCTCAGGACAAGGCGAAGCTTGAGGAGCTCGATTTGGTGCG
TCGCGACTGCGCGGGAAAGGTGGATGCCGTGGAGGAAGCTCAGGACAAGG
CGAAGCTTGAGGAGCTCGATTTGGTGCGTCGCGACTGCGCGGGAAAGGTG
GATGCCGTGGAGGAAGAAAACCGATCTCTGCAGGACAAGTTGGAGGGGCT
GTCCGCGCAAGCGTTGGAGCTGAAGGAAAGAGCCGACGCGAGGAAGAAAA
CCGATCTCTGCAGGACAAGTTGGAGGGGCTGTCCGCGCAAGCGTTGGAGC
TGAAGGAAAGAGCCGACGCGAGTGTGCAAATGCCGCCAGACGCCGGCGTT
TCAGCCGAAGATTGGGCGGCGAGAGAGAAGGAGCTGCTGGAAATGGAGGC
CCGTCTTGTCGCCGTAGTGGCGCAGAACTGTGCAAATGCCGCCAGACGCC
GGCGTTTCAGCCGAAGATTGGGCGGCGAGAGAGAAGGAGCTGCTGGAAAT
GGAGGCCCGTCTTGTCGCCGTAGTGGCGCAGAACAACGAGCTTGAGAGAA
CGATCGAAGCGTCTTCTGCCTCTGCTTCTGCTGCGGGAGAGCGACTGCCT
CCTTCCCCTGGCAAGGAGGAGCGGCAGGCCAAGATTGTGGCGCTTGAATC
GGAGGTAAATAACGAGCTTGAGAGAACGATCGAAGCGTCTTCTGCCTCTG
CTTCTGCTGCGGGAGAGCGACTGCCTCCTTCCCCTGGCAAGGAGGAGCGG
CAGGCCAAGATTGTGGCGCTTGAATCGGAGGTAAAT
back to top