mRNA_M-pyrifera_M_contig81305.19016.1 (mRNA) Macrocystis pyrifera P11B4 male
Overview
Homology
BLAST of mRNA_M-pyrifera_M_contig81305.19016.1 vs. uniprot
Match: A0A7V0NN94_9ACTN (Uncharacterized protein n=1 Tax=Actinomycetia bacterium TaxID=1883427 RepID=A0A7V0NN94_9ACTN) HSP 1 Score: 151 bits (382), Expect = 1.680e-40 Identity = 68/128 (53.12%), Postives = 87/128 (67.97%), Query Frame = 1 Query: 16 RDPAGRLLAYDTGTAVTHAATDGHNDLYGLINPDGTLTDTATYDPYGEPIATTGTTNPVLGYQTDYTDPTTDHVWMGARWYQPSSATFLSRDTYAGEITTPFTLNRYTYAAGNPIRYWDPTGRCSEYV 399 R P GR+LA G + A D H DL L G ++DTA +DP+G+P+ATTGT+ LG+Q+DYTDPT+DHVWMGARWY A FLSRD GE++TP +LNRYTY NP+ +WDP GR + + Sbjct: 392 RSPGGRVLAQSDGVSDLLAGVDRHGDLTFLFTAAGVVSDTALFDPFGDPLATTGTSGTSLGFQSDYTDPTSDHVWMGARWYDGGWAAFLSRDVVFGELSTPISLNRYTYGFANPLSFWDPDGRIPQSI 519
BLAST of mRNA_M-pyrifera_M_contig81305.19016.1 vs. uniprot
Match: A0A3B0SFW5_9ZZZZ (Uncharacterized protein (Fragment) n=1 Tax=hydrothermal vent metagenome TaxID=652676 RepID=A0A3B0SFW5_9ZZZZ) HSP 1 Score: 140 bits (352), Expect = 1.590e-37 Identity = 63/125 (50.40%), Postives = 83/125 (66.40%), Query Frame = 1 Query: 10 FHRDPAGRLLAYDTGTAVTHAATDGHNDLYGLINPDGTLTDTATYDPYGEPIATTGTTNPVLGYQTDYTDPTTDHVWMGARWYQPSSATFLSRDTYAGEITTPFTLNRYTYAAGNPIRYWDPTGR 384 + R P GRL++ G A D H DL L G ++DTA +DP+G+ +A TG+T+P+LG+Q D+TDP + VW+GARWY A FLSRDT GE +P +LNRYTYA+ NP+ YWDP GR Sbjct: 59 YGRSPGGRLVSQSDGVTSLLAGLDRHGDLSFLYTAAGVVSDTAVFDPFGDAVAETGSTDPMLGFQADFTDPVSGQVWLGARWYDGGWAAFLSRDTVFGEQGSPVSLNRYTYASNNPLSYWDPDGR 183
BLAST of mRNA_M-pyrifera_M_contig81305.19016.1 vs. uniprot
Match: A0A3B0T029_9ZZZZ (Uncharacterized protein (Fragment) n=1 Tax=hydrothermal vent metagenome TaxID=652676 RepID=A0A3B0T029_9ZZZZ) HSP 1 Score: 139 bits (351), Expect = 2.020e-37 Identity = 63/125 (50.40%), Postives = 83/125 (66.40%), Query Frame = 1 Query: 10 FHRDPAGRLLAYDTGTAVTHAATDGHNDLYGLINPDGTLTDTATYDPYGEPIATTGTTNPVLGYQTDYTDPTTDHVWMGARWYQPSSATFLSRDTYAGEITTPFTLNRYTYAAGNPIRYWDPTGR 384 + R P GRL++ G A D H DL L G ++DTA +DP+G+ +A TG+T+P+LG+Q D+TDP + VW+GARWY A FLSRDT GE +P +LNRYTYA+ NP+ YWDP GR Sbjct: 97 YGRSPGGRLVSQTDGVTSLLAGLDRHGDLSFLYTAAGVVSDTAVFDPFGDAVAETGSTDPMLGFQADFTDPVSGQVWLGARWYDGGWAAFLSRDTVFGEQGSPVSLNRYTYASNNPLSYWDPDGR 221
BLAST of mRNA_M-pyrifera_M_contig81305.19016.1 vs. uniprot
Match: A0A0F9CIC1_9ZZZZ (Uncharacterized protein (Fragment) n=1 Tax=marine sediment metagenome TaxID=412755 RepID=A0A0F9CIC1_9ZZZZ) HSP 1 Score: 139 bits (350), Expect = 6.310e-36 Identity = 67/146 (45.89%), Postives = 94/146 (64.38%), Query Frame = 1 Query: 1 NDAFHRDPAGRLLAYDTGTAVTHAATDGHNDLYGLINPDGTLT--DTATYDPYGEPIATTGTTNPVLGYQTDYTDPTTDHVWMGARWYQPSSATFLSRDTYAGEITTPFTLNRYTYAAGNPIRYWDPTGRCSEYVQETGECIFYGN 432 ++ + R P GR++++D GT + D H D+ G + GT+T D+ +DP+G+P ATTG++ +G+Q D+TDP + VWMGARWY P+SA F SRDT GE+ TP +LNRYTY NP+ YWDP GR V T + YG+ Sbjct: 303 SNIYGRSPGGRVVSHDNGTVTSLVGLDRHGDV-GYLATTGTVTVTDSRVFDPFGKPAATTGSSTITVGFQGDWTDPASGDVWMGARWYDPTSAQFRSRDTLRGELATPISLNRYTYGWANPLTYWDPDGRM---VTPTPQLEKYGS 444
BLAST of mRNA_M-pyrifera_M_contig81305.19016.1 vs. uniprot
Match: UPI001B0042B9 (Ig-like domain repeat protein n=1 Tax=Nocardioidaceae bacterium TaxID=1871072 RepID=UPI001B0042B9) HSP 1 Score: 123 bits (309), Expect = 6.780e-30 Identity = 61/123 (49.59%), Postives = 78/123 (63.41%), Query Frame = 1 Query: 16 RDPAGRLLAYDTGTAVTHAA-TDGHNDLYGLINPDGTLTDTATYDPYGEPIATTGTTNPVLGYQTDYTDPTTDHVWMGARWYQPSSATFLSRDTYAGEITTPFTLNRYTYAAGNPIRYWDPTG 381 RDP+G +A TGT ++ H DL L + +GT+ + Y+PYGE TTGT +P LG+Q DYTD TT +WMGARWY P TF +RDT G++ TP TLNRYTYA NP+ +D G Sbjct: 4360 RDPSGAPMAQKTGTGTPSLIRSNRHGDLTALFSGNGTVNGSRVYEPYGEVAGTTGTASP-LGFQGDYTDATTHDLWMGARWYLPDVGTFTARDTVFGQLRTPITLNRYTYAGNNPLSMFDADG 4481
BLAST of mRNA_M-pyrifera_M_contig81305.19016.1 vs. uniprot
Match: A0A7H0IS40_9ACTN (DNRLRE domain-containing protein n=2 Tax=Streptomyces roseirectus TaxID=2768066 RepID=A0A7H0IS40_9ACTN) HSP 1 Score: 120 bits (302), Expect = 5.900e-29 Identity = 63/125 (50.40%), Postives = 76/125 (60.80%), Query Frame = 1 Query: 10 FHRDPAGRLLAYDTGTAVTHAATDGHNDLYGLINPDGT-LTDTATYDPYGEPIATTGTTNPVLGYQTDYTDPTTDHVWMGARWYQPSSATFLSRDTYAGEITTPFTLNRYTYAAGNPIRYWDPTG 381 ++R P G LL+Y TGT A TD H DL + PD T T + TYDP+G TTGTT P LGYQ+ +TDPTT + M ARWYQP + +F SRDT+ E NRY Y GNP+ DPTG Sbjct: 2991 YNRTPDGALLSYSTGTTKQWALTDQHTDLVAGLTPDATQTTSSTTYDPFGTKTTTTGTT-PALGYQSGWTDPTTGDINMAARWYQPGTGSFGSRDTWQLEPNPSSRANRYLYGGGNPLLRTDPTG 3114
BLAST of mRNA_M-pyrifera_M_contig81305.19016.1 vs. uniprot
Match: A0A2V1NSP4_9ACTN (Laminin G n=1 Tax=Streptomyces sp. V2 TaxID=1424099 RepID=A0A2V1NSP4_9ACTN) HSP 1 Score: 120 bits (301), Expect = 8.040e-29 Identity = 62/125 (49.60%), Postives = 79/125 (63.20%), Query Frame = 1 Query: 10 FHRDPAGRLLAYDTGTAVTHAATDGHNDLYGLINPDGT-LTDTATYDPYGEPIATTGTTNPVLGYQTDYTDPTTDHVWMGARWYQPSSATFLSRDTYAGEITTPFTLNRYTYAAGNPIRYWDPTG 381 ++R P G LL+Y GT A TD H DL + P+ T T + TYDP+G ATTGTT P +GYQ+ +TDPT+ + M ARWYQP + +F SRDT+ E T NRY YA G+P+ Y DPTG Sbjct: 2990 YNRTPDGALLSYTDGTTKQRALTDQHTDLIAGLTPNATQTTSSTTYDPFGTKTATTGTT-PAVGYQSGWTDPTSGDINMAARWYQPGTGSFGSRDTWQLEPTPSARSNRYLYANGSPLNYTDPTG 3113
BLAST of mRNA_M-pyrifera_M_contig81305.19016.1 vs. uniprot
Match: UPI001FD978F3 (DNRLRE domain-containing protein n=1 Tax=Kibdelosporangium banguiense TaxID=1365924 RepID=UPI001FD978F3) HSP 1 Score: 119 bits (299), Expect = 1.490e-28 Identity = 67/140 (47.86%), Postives = 86/140 (61.43%), Query Frame = 1 Query: 10 FHRDPAGRLLAYDTGTAVTHAATDGHNDLYGLINPDGTLT--DTATYDPYGEPIATTGTTNPVLGYQTDYTDPTTDHVWMGARWYQPSSATFLSRDTYAGEITTPFTLNRYTYAAGNPIRYWDPTGRCSEY-VQETGECI 420 + R P G +LA GT TD H DL G + P G+L D+AT+DP+G+P+ATTG LGYQ+DYTDP+T +V MGARWY PS+ F +RD + T NRYTYAAG+P DP G C+ V+ET + I Sbjct: 2568 YSRGPGGDVLALSQGTDKRLTLTDQHGDLIGGLAPTGSLAVADSATFDPFGKPLATTGAKRS-LGYQSDYTDPSTGNVDMGARWYTPSTGGFNARDKISLPRTPSGLANRYTYAAGSPTNNIDPDGHCAATAVKETKKAI 2706
BLAST of mRNA_M-pyrifera_M_contig81305.19016.1 vs. uniprot
Match: UPI000DD5B6C7 (DNRLRE domain-containing protein n=1 Tax=Streptomyces sp. ST1015 TaxID=1848900 RepID=UPI000DD5B6C7) HSP 1 Score: 119 bits (298), Expect = 2.040e-28 Identity = 62/127 (48.82%), Postives = 79/127 (62.20%), Query Frame = 1 Query: 10 FHRDPAGRLLAYDTGTAVTHAATDGHNDLYGLINPDGTLTDTAT-YDPYGEPIATTGTTNPVLGYQTDYTDPTTDHVWMGARWYQPSSATFLSRDTYAGEITTPFTLNRYTYAAGNPIRYWDPTGRC 387 ++R P G LL+Y GT A TD H DL + PD T T ++T YDP+G ATTGTT P +GYQ+ +TDPT+ V M ARWYQP + +F SRDT+ + T NRY+Y AG + DPTG C Sbjct: 2990 YNRTPDGALLSYTDGTTKQRALTDQHTDLIAGLTPDATQTTSSTAYDPFGTKTATTGTT-PAVGYQSGWTDPTSGDVNMAARWYQPGTGSFGSRDTWQLDPTPSGNANRYSYGAGGALNGTDPTGHC 3115
BLAST of mRNA_M-pyrifera_M_contig81305.19016.1 vs. uniprot
Match: UPI001EE4C21F (polymorphic toxin-type HINT domain-containing protein n=3 Tax=unclassified Frankia TaxID=2632575 RepID=UPI001EE4C21F) HSP 1 Score: 115 bits (289), Expect = 2.900e-27 Identity = 62/136 (45.59%), Postives = 77/136 (56.62%), Query Frame = 1 Query: 1 NDAFHRDPAGRLLAYDTGTAVTHAATDGHNDLYGLINPDGTLTDTATYDPYGEPIATTGTTNPVLGYQTDYTDPTTDHVWMGARWYQPSSATFLSRDTYAGEITTPFTLNRYTYAAGNPIRYWDPTGRCSEYVQET 408 + +F RDP G L+A + TD H DL G LTD+ +Y P+GEP+A G N +GYQ +TDP TD V ARWY P + TF+SRDT IT NRYTYAAGNP+ Y DPTG ++ T Sbjct: 10 SSSFSRDPDGDLVAIGSPAGNWATLTDTHGDLVAAFTTAGVLTDSRSYTPFGEPVAA-GNPNLHVGYQGSWTDPATDKVNAQARWYTPGTGTFISRDTANLPITGTAASNRYTYAAGNPLTYNDPTGFANKSTANT 144 The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig81305.19016.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_M-pyrifera_M_contig81305.19016.1 >prot_M-pyrifera_M_contig81305.19016.1 ID=prot_M-pyrifera_M_contig81305.19016.1|Name=mRNA_M-pyrifera_M_contig81305.19016.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=144bp NDAFHRDPAGRLLAYDTGTAVTHAATDGHNDLYGLINPDGTLTDTATYDPback to top mRNA from alignment at M-pyrifera_M_contig81305:3..434+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_M-pyrifera_M_contig81305.19016.1 ID=mRNA_M-pyrifera_M_contig81305.19016.1|Name=mRNA_M-pyrifera_M_contig81305.19016.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=432bp|location=Sequence derived from alignment at M-pyrifera_M_contig81305:3..434+ (Macrocystis pyrifera P11B4 male)back to top Coding sequence (CDS) from alignment at M-pyrifera_M_contig81305:3..434+ >mRNA_M-pyrifera_M_contig81305.19016.1 ID=mRNA_M-pyrifera_M_contig81305.19016.1|Name=mRNA_M-pyrifera_M_contig81305.19016.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=864bp|location=Sequence derived from alignment at M-pyrifera_M_contig81305:3..434+ (Macrocystis pyrifera P11B4 male)back to top |