mRNA_M-pyrifera_M_contig81304.19014.1 (mRNA) Macrocystis pyrifera P11B4 male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_M-pyrifera_M_contig81304.19014.1
Unique NamemRNA_M-pyrifera_M_contig81304.19014.1
TypemRNA
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Homology
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BLAST of mRNA_M-pyrifera_M_contig81304.19014.1 vs. uniprot
Match: A0A7S4MP24_9EUKA (Hypothetical protein n=1 Tax=Vannella sp. CB-2014 TaxID=1487602 RepID=A0A7S4MP24_9EUKA)

HSP 1 Score: 122 bits (305), Expect = 7.160e-31
Identity = 59/100 (59.00%), Postives = 73/100 (73.00%), Query Frame = 1 
Query:    1 LASATYAKKREYFIAAEEVQWNYAPTGMNNFKEVPLTEDHESAVFFEQSDDRIGGTYLKALYIQYTDASFEQRVERGPEWEHLGFLGPPISAEVGDTIEV 300
            L  +++A  R ++IAA+EV+WNYAP+G NN +EV L E  +S VFFE   DRIGGTY+KALY +YTD SF + V R    EHLG LGP I AEVGDTIE+
Sbjct:   16 LVHSSFASTRRHYIAADEVEWNYAPSGFNNVEEVLLEEGRDSHVFFETGPDRIGGTYIKALYREYTDESFSELVPRD---EHLGLLGPIIWAEVGDTIEI 112
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BLAST of mRNA_M-pyrifera_M_contig81304.19014.1 vs. uniprot
Match: UPI00074FAE24 (ceruloplasmin isoform X1 n=2 Tax=Gekko japonicus TaxID=146911 RepID=UPI00074FAE24)

HSP 1 Score: 122 bits (305), Expect = 4.530e-30
Identity = 58/97 (59.79%), Postives = 69/97 (71.13%), Query Frame = 1 
Query:   19 AKKREYFIAAEEVQWNYAPTGMNNFKEVPLTEDHESAVFFEQSDDRIGGTYLKALYIQYTDASFEQRVERGPEWEHLGFLGPPISAEVGDTIEVRHQ 309
            AK R Y+IAAEE+ WNYAP+G+NNF    L  D ES  FFEQ++ RIGGTY KA++ +Y D +F +R ER PE EHLG LGP I AEVGD I V  Q
Sbjct:  369 AKIRHYYIAAEEILWNYAPSGINNFTGEELINDGESEAFFEQNEKRIGGTYKKAVFREYVDGTFTERKERLPEEEHLGLLGPVIRAEVGDIIRVTFQ 465
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BLAST of mRNA_M-pyrifera_M_contig81304.19014.1 vs. uniprot
Match: A0A7K5HYA7_CROSL (CERU protein (Fragment) n=1 Tax=Crotophaga sulcirostris TaxID=33598 RepID=A0A7K5HYA7_CROSL)

HSP 1 Score: 120 bits (301), Expect = 1.570e-29
Identity = 57/95 (60.00%), Postives = 67/95 (70.53%), Query Frame = 1 
Query:   16 YAKKREYFIAAEEVQWNYAPTGMNNFKEVPLTEDHESAVFFEQSDDRIGGTYLKALYIQYTDASFEQRVERGPEWEHLGFLGPPISAEVGDTIEV 300
            + K REYFIAAEE+ WNY P+ MN+F    L  D ES VFFEQ + RIGG+Y KA+Y +YTD SF +  +R PE EHLG LGP I AEVGD I V
Sbjct:  368 FTKIREYFIAAEEIIWNYGPSAMNHFTGQELIADSESQVFFEQGETRIGGSYKKAIYKEYTDGSFTEHKKRLPEEEHLGLLGPVIKAEVGDRIRV 462
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BLAST of mRNA_M-pyrifera_M_contig81304.19014.1 vs. uniprot
Match: UPI001864DAF7 (ceruloplasmin n=1 Tax=Megalops cyprinoides TaxID=118141 RepID=UPI001864DAF7)

HSP 1 Score: 120 bits (300), Expect = 2.140e-29
Identity = 55/95 (57.89%), Postives = 67/95 (70.53%), Query Frame = 1 
Query:   16 YAKKREYFIAAEEVQWNYAPTGMNNFKEVPLTEDHESAVFFEQSDDRIGGTYLKALYIQYTDASFEQRVERGPEWEHLGFLGPPISAEVGDTIEV 300
            + + REY+IAAEE  W+Y PT +N F   PL  D ES  FFE  DDRIGG Y KA+Y++YTD++F +R +R PE EHLG LGP I AEV DTI V
Sbjct:  370 HGEVREYYIAAEEAIWDYGPTQINKFTGKPLKSDSESETFFETGDDRIGGKYKKAVYVEYTDSTFTKRKDRTPEEEHLGILGPVIRAEVADTIRV 464
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BLAST of mRNA_M-pyrifera_M_contig81304.19014.1 vs. uniprot
Match: A0A852MH43_9AVES (CERU protein (Fragment) n=1 Tax=Centropus bengalensis TaxID=1463675 RepID=A0A852MH43_9AVES)

HSP 1 Score: 119 bits (297), Expect = 5.350e-29
Identity = 57/93 (61.29%), Postives = 66/93 (70.97%), Query Frame = 1 
Query:   22 KKREYFIAAEEVQWNYAPTGMNNFKEVPLTEDHESAVFFEQSDDRIGGTYLKALYIQYTDASFEQRVERGPEWEHLGFLGPPISAEVGDTIEV 300
            K REYFIAAEE+ WNY P+  N+F    L  D ES VFFEQS+ RIGG+Y KA+Y +YTD SF +  +R PE EHLG LGP I AEVGD I V
Sbjct:  320 KTREYFIAAEEIIWNYGPSATNHFTGQELIADSESQVFFEQSETRIGGSYKKAIYKEYTDGSFTKHKKRLPEEEHLGLLGPVIKAEVGDCIRV 412
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BLAST of mRNA_M-pyrifera_M_contig81304.19014.1 vs. uniprot
Match: UPI00051C9BCF (ceruloplasmin n=1 Tax=Cuculus canorus TaxID=55661 RepID=UPI00051C9BCF)

HSP 1 Score: 119 bits (297), Expect = 5.360e-29
Identity = 57/93 (61.29%), Postives = 65/93 (69.89%), Query Frame = 1 
Query:   22 KKREYFIAAEEVQWNYAPTGMNNFKEVPLTEDHESAVFFEQSDDRIGGTYLKALYIQYTDASFEQRVERGPEWEHLGFLGPPISAEVGDTIEV 300
            K REYFIAA E+ WNY P+  N F    L  D ES VFFEQS+ RIGG+Y KA+Y +YTD SF Q  ER PE EHLG LGP I AEVGD ++V
Sbjct:  150 KTREYFIAAGEIIWNYGPSATNRFTGEELIADSESQVFFEQSETRIGGSYKKAIYKEYTDGSFTQHKERLPEEEHLGLLGPVIKAEVGDCVKV 242
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BLAST of mRNA_M-pyrifera_M_contig81304.19014.1 vs. uniprot
Match: A0A8D0E029_9SAUR (Uncharacterized protein n=10 Tax=Salvator merianae TaxID=96440 RepID=A0A8D0E029_9SAUR)

HSP 1 Score: 119 bits (297), Expect = 5.410e-29
Identity = 54/94 (57.45%), Postives = 69/94 (73.40%), Query Frame = 1 
Query:   19 AKKREYFIAAEEVQWNYAPTGMNNFKEVPLTEDHESAVFFEQSDDRIGGTYLKALYIQYTDASFEQRVERGPEWEHLGFLGPPISAEVGDTIEV 300
            +K R Y+IAAEE +WNYAP+G+NNF    L  D ++ VFFE+   RIGGTY KAL+  Y+D +F QR+ER P  +HLG LGP I AEVG+TI+V
Sbjct:  254 SKIRHYYIAAEETEWNYAPSGINNFTGEELINDEDAKVFFEKGPQRIGGTYKKALFYGYSDDNFAQRLERPPAEQHLGLLGPVIKAEVGETIQV 347
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BLAST of mRNA_M-pyrifera_M_contig81304.19014.1 vs. uniprot
Match: A0A091GFP0_9AVES (Ceruloplasmin (Fragment) n=3 Tax=Cuculiformes TaxID=8940 RepID=A0A091GFP0_9AVES)

HSP 1 Score: 119 bits (297), Expect = 5.430e-29
Identity = 57/93 (61.29%), Postives = 65/93 (69.89%), Query Frame = 1 
Query:   22 KKREYFIAAEEVQWNYAPTGMNNFKEVPLTEDHESAVFFEQSDDRIGGTYLKALYIQYTDASFEQRVERGPEWEHLGFLGPPISAEVGDTIEV 300
            K REYFIAA E+ WNY P+  N F    L  D ES VFFEQS+ RIGG+Y KA+Y +YTD SF Q  ER PE EHLG LGP I AEVGD ++V
Sbjct:  372 KTREYFIAAGEIIWNYGPSATNRFTGEELIADSESQVFFEQSETRIGGSYKKAIYKEYTDGSFTQHKERLPEEEHLGLLGPVIKAEVGDCVKV 464
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BLAST of mRNA_M-pyrifera_M_contig81304.19014.1 vs. uniprot
Match: UPI000C6D4927 (ceruloplasmin-like n=1 Tax=Centruroides sculpturatus TaxID=218467 RepID=UPI000C6D4927)

HSP 1 Score: 119 bits (297), Expect = 5.430e-29
Identity = 55/89 (61.80%), Postives = 64/89 (71.91%), Query Frame = 1 
Query:   28 REYFIAAEEVQWNYAPTGMNNFKEVPLTEDHESAVFFEQSDDRIGGTYLKALYIQYTDASFEQRVERGPEWEHLGFLGPPISAEVGDTI 294
            R+YFIAAEE+QWNYAP+ +N F    LT D  +AVFFEQ  +RIGGTY KA+Y  YTDA+F  R  R  E EHLG LGP I  EVG+TI
Sbjct:  408 RKYFIAAEEIQWNYAPSNLNKFNNKELTSDEHAAVFFEQQPNRIGGTYKKAVYRSYTDANFTNRNPRNEEEEHLGLLGPVIRIEVGETI 496
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BLAST of mRNA_M-pyrifera_M_contig81304.19014.1 vs. uniprot
Match: A0A7K8XLQ3_9PICI (CERU protein (Fragment) n=2 Tax=Ramphastidae TaxID=57381 RepID=A0A7K8XLQ3_9PICI)

HSP 1 Score: 118 bits (296), Expect = 7.400e-29
Identity = 58/93 (62.37%), Postives = 67/93 (72.04%), Query Frame = 1 
Query:   22 KKREYFIAAEEVQWNYAPTGMNNFKEVPLTEDHESAVFFEQSDDRIGGTYLKALYIQYTDASFEQRVERGPEWEHLGFLGPPISAEVGDTIEV 300
            K REYFIAAEE+ WNY P+ MN+F    LT D +S VFFEQS+ RIGG+Y KA+Y +YTD SF    +R PE EHLG LGP I AEVGD I V
Sbjct:  371 KIREYFIAAEEIIWNYGPSAMNHFTGQELTADSDSQVFFEQSETRIGGSYKKAIYKEYTDGSFTVWKKRLPEEEHLGLLGPVIRAEVGDYIRV 463
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig81304.19014.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A7S4MP24_9EUKA7.160e-3159.00Hypothetical protein n=1 Tax=Vannella sp. CB-2014 ... [more]
UPI00074FAE244.530e-3059.79ceruloplasmin isoform X1 n=2 Tax=Gekko japonicus T... [more]
A0A7K5HYA7_CROSL1.570e-2960.00CERU protein (Fragment) n=1 Tax=Crotophaga sulciro... [more]
UPI001864DAF72.140e-2957.89ceruloplasmin n=1 Tax=Megalops cyprinoides TaxID=1... [more]
A0A852MH43_9AVES5.350e-2961.29CERU protein (Fragment) n=1 Tax=Centropus bengalen... [more]
UPI00051C9BCF5.360e-2961.29ceruloplasmin n=1 Tax=Cuculus canorus TaxID=55661 ... [more]
A0A8D0E029_9SAUR5.410e-2957.45Uncharacterized protein n=10 Tax=Salvator merianae... [more]
A0A091GFP0_9AVES5.430e-2961.29Ceruloplasmin (Fragment) n=3 Tax=Cuculiformes TaxI... [more]
UPI000C6D49275.430e-2961.80ceruloplasmin-like n=1 Tax=Centruroides sculpturat... [more]
A0A7K8XLQ3_9PICI7.400e-2962.37CERU protein (Fragment) n=2 Tax=Ramphastidae TaxID... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig81304contigM-pyrifera_M_contig81304:15..323 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-19
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Properties
Property NameValue
Taxonomic scopeMammalia
Seed ortholog score119.0
Seed ortholog evalue1.3e-24
Seed eggNOG ortholog10181.XP_004834476.1
Preferred nameCP
KEGG rclassRC02758
KEGG koko:K13624
KEGG ReactionR00078
KEGG Pathwayko00860,ko04216,map00860,map04216
Hectar predicted targeting categoryother localisation
GOsGO:0000041,GO:0001889,GO:0003674,GO:0003824,GO:0004322,GO:0005488,GO:0005507,GO:0005515,GO:0005575,GO:0005576,GO:0005615,GO:0005623,GO:0005886,GO:0006810,GO:0006811,GO:0006812,GO:0006825,GO:0006873,GO:0006875,GO:0006879,GO:0007275,GO:0007568,GO:0007584,GO:0008150,GO:0008152,GO:0009605,GO:0009987,GO:0009991,GO:0010035,GO:0010038,GO:0015679,GO:0016020,GO:0016491,GO:0016722,GO:0016724,GO:0019725,GO:0030001,GO:0030003,GO:0030323,GO:0030324,GO:0031224,GO:0031225,GO:0031226,GO:0031667,GO:0032501,GO:0032502,GO:0034220,GO:0035295,GO:0035434,GO:0042221,GO:0042592,GO:0043167,GO:0043169,GO:0044421,GO:0044425,GO:0044459,GO:0044464,GO:0046658,GO:0046688,GO:0046872,GO:0046914,GO:0046916,GO:0048513,GO:0048731,GO:0048732,GO:0048856,GO:0048878,GO:0050801,GO:0050896,GO:0051087,GO:0051179,GO:0051234,GO:0055065,GO:0055072,GO:0055076,GO:0055080,GO:0055082,GO:0055085,GO:0055114,GO:0060541,GO:0061008,GO:0065007,GO:0065008,GO:0071944,GO:0098655,GO:0098660,GO:0098662,GO:0098771
EggNOG free text desc.Belongs to the multicopper oxidase family
EggNOG OGs35F7P@314146,38BPV@33154,3BAZ3@33208,3CW79@33213,3JF1X@40674,4832U@7711,48Y6W@7742,4Q11G@9989,COG2132@1,KOG1263@2759
EC1.16.3.1
COG Functional cat.Q
Best tax levelRodentia
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko01000,ko04147
Exons1
Model size309
Cds size309
Stop0
Start0
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622816719.2606165-CDS-M-pyrifera_M_contig81304:14..3231622816719.2606165-CDS-M-pyrifera_M_contig81304:14..323Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig81304 15..323 -
1692278138.894917-CDS-M-pyrifera_M_contig81304:14..3231692278138.894917-CDS-M-pyrifera_M_contig81304:14..323Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig81304 15..323 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig81304.19014.1prot_M-pyrifera_M_contig81304.19014.1Macrocystis pyrifera P11B4 malepolypeptideM-pyrifera_M_contig81304 15..323 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_M-pyrifera_M_contig81304.19014.1

>prot_M-pyrifera_M_contig81304.19014.1 ID=prot_M-pyrifera_M_contig81304.19014.1|Name=mRNA_M-pyrifera_M_contig81304.19014.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=103bp
LASATYAKKREYFIAAEEVQWNYAPTGMNNFKEVPLTEDHESAVFFEQSD
DRIGGTYLKALYIQYTDASFEQRVERGPEWEHLGFLGPPISAEVGDTIEV
RHQ
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mRNA from alignment at M-pyrifera_M_contig81304:15..323-

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_M-pyrifera_M_contig81304.19014.1 ID=mRNA_M-pyrifera_M_contig81304.19014.1|Name=mRNA_M-pyrifera_M_contig81304.19014.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=309bp|location=Sequence derived from alignment at M-pyrifera_M_contig81304:15..323- (Macrocystis pyrifera P11B4 male)
CTCGCCTCCGCTACCTACGCGAAGAAGCGCGAGTACTTCATCGCAGCGGA
GGAGGTACAGTGGAACTATGCCCCTACCGGTATGAACAACTTCAAAGAAG
TCCCCCTTACAGAAGACCACGAGTCCGCTGTCTTCTTCGAGCAGAGCGAC
GACAGGATCGGCGGAACGTACCTGAAGGCGCTCTACATCCAGTACACCGA
CGCCTCTTTCGAGCAGCGCGTCGAGCGCGGCCCTGAGTGGGAGCACCTCG
GGTTCCTCGGCCCCCCCATCTCCGCCGAGGTTGGCGACACCATCGAGGTA
CGCCACCAA
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Coding sequence (CDS) from alignment at M-pyrifera_M_contig81304:15..323-

>mRNA_M-pyrifera_M_contig81304.19014.1 ID=mRNA_M-pyrifera_M_contig81304.19014.1|Name=mRNA_M-pyrifera_M_contig81304.19014.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=618bp|location=Sequence derived from alignment at M-pyrifera_M_contig81304:15..323- (Macrocystis pyrifera P11B4 male)
CTCGCCTCCGCTACCTACGCGAAGAAGCGCGAGTACTTCATCGCAGCGGA
GGAGGTACAGTGGAACTATGCCCCTACCGGTATGAACAACTTCAAAGAAG
TCCCCCTTACAGAAGACCACGAGTCCGCTGTCTTCTTCGAGCAGAGCGAC
GACAGGATCGGCGGAACGTACCTGAAGGCGCTCTACATCCAGTACACCGA
CGCCTCTTTCGAGCAGCGCGTCGAGCGCGGCCCTGAGTGGGAGCACCTCG
GGTTCCTCGGCCCCCCCATCTCCGCCGAGGTTGGCGACACCATCGAGGTA
CGCCACCAACTCGCCTCCGCTACCTACGCGAAGAAGCGCGAGTACTTCAT
CGCAGCGGAGGAGGTACAGTGGAACTATGCCCCTACCGGTATGAACAACT
TCAAAGAAGTCCCCCTTACAGAAGACCACGAGTCCGCTGTCTTCTTCGAG
CAGAGCGACGACAGGATCGGCGGAACGTACCTGAAGGCGCTCTACATCCA
GTACACCGACGCCTCTTTCGAGCAGCGCGTCGAGCGCGGCCCTGAGTGGG
AGCACCTCGGGTTCCTCGGCCCCCCCATCTCCGCCGAGGTTGGCGACACC
ATCGAGGTACGCCACCAA
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