mRNA_M-pyrifera_M_contig812.18995.1 (mRNA) Macrocystis pyrifera P11B4 male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_M-pyrifera_M_contig812.18995.1
Unique NamemRNA_M-pyrifera_M_contig812.18995.1
TypemRNA
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Homology
[Close]
BLAST of mRNA_M-pyrifera_M_contig812.18995.1 vs. uniprot
Match: D7FNA8_ECTSI (Tryptophan-rich sensory-like protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FNA8_ECTSI)

HSP 1 Score: 317 bits (813), Expect = 2.900e-103
Identity = 153/201 (76.12%), Postives = 175/201 (87.06%), Query Frame = 2 
Query:    2 YVAGTGVEFGIIMGGLSLLQGGVLPRLGAKWAKATVFLTFGFLAMKSRTFGVLNARRPKVSVEKEAKSERRRPDWMPPPKVFPFIWITIGILRAVSSTLVWEALGNKLVTTPIAAMVLHLSVGDTWNHINNVEKRLGVAVPVVFLVWLSVANTAFRYYQTLPKAGLIILPSVIWIAIANLLVQAIWRLNGKEPLYPAKKVS 604
            Y+AGT  EF IIMG L+L+QG +LPRL AKWA+ TVFLTFGFLAMKSRTF +LNARRP ++ EKE K ERRRPDWMPP K FP IWITIG+LRA+S+ +VWEALG  LV TPIAAMVLHLSVGDTWNHINNVEK+LGVAV  VFLVWLSVAN  +RYYQ LPKAGL++LPS++WI++ANLLVQ+IWRLNGKEPLYP K+ S
Sbjct:   96 YIAGTAGEFTIIMGLLALMQGKLLPRLPAKWAQRTVFLTFGFLAMKSRTFSLLNARRPSLAKEKEEKIERRRPDWMPPIKAFPVIWITIGVLRALSTAMVWEALGGNLVATPIAAMVLHLSVGDTWNHINNVEKKLGVAVSGVFLVWLSVANAVYRYYQVLPKAGLVLLPSLLWISVANLLVQSIWRLNGKEPLYPPKQTS 296
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BLAST of mRNA_M-pyrifera_M_contig812.18995.1 vs. uniprot
Match: A0A4D9CZE4_9STRA (Uncharacterized protein n=1 Tax=Nannochloropsis salina CCMP1776 TaxID=1027361 RepID=A0A4D9CZE4_9STRA)

HSP 1 Score: 191 bits (485), Expect = 6.530e-55
Identity = 94/170 (55.29%), Postives = 122/170 (71.76%), Query Frame = 2 
Query:   98 KATVFLT---FGFLAMKSRTFGVLNARRPKVSVEKEAKSERRRPDWMPPPKVFPFIWITIGILRAVSSTLVWEALGNKLVTTPIAAMVLHLSVGDTWNHINNVEKRLGVAVPVVFLVWLSVANTAFRYYQTLPKAGLIILPSVIWIAIANLLVQAIWRLNGKEPLYPAKK 598
            +A++FL    F F++++SR F +L+  RP V++E   +  R+RP WMPP K FP IWI+IG+LR ++S+LV+E   N L++  + A VLHLSVGDTWN I NVE R G +VP VFLVWLSV N    Y QTLP AG ++ PS +WI IAN+LV +IWRLNG EPLYP KK
Sbjct:   63 QASIFLVRAFFAFMSLRSRVFSILDNSRPTVAMEDRKRRLRKRPSWMPPAKAFPVIWISIGVLRTIASSLVYETT-NTLLSPALLAFVLHLSVGDTWNTITNVEDRQGASVPGVFLVWLSVVNAVRMYAQTLPLAGKVLAPSAVWITIANVLVISIWRLNGAEPLYPFKK 231
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BLAST of mRNA_M-pyrifera_M_contig812.18995.1 vs. uniprot
Match: L1JGW3_GUITC (Uncharacterized protein n=2 Tax=Geminigeraceae TaxID=589343 RepID=L1JGW3_GUITC)

HSP 1 Score: 189 bits (479), Expect = 9.570e-54
Identity = 95/196 (48.47%), Postives = 130/196 (66.33%), Query Frame = 2 
Query:   14 TGVEFGIIMGGLSLLQ--GGVLPRLGAKWAKATVFLTFGFLAMKSRTFGVLNARRPKVSVEKEAKSERRRPDWMPPPKVFPFIWITIGILRAVSSTLVWEALGNKLVTTPIAAMVLHLSVGDTWNHINNVEKRLGVAVPVVFLVWLSVANTAFRYYQTLPKAGLIILPSVIWIAIANLLVQAIWRLNGKEPLYPAK 595
            T VE  ++   +  +Q  GG LP +G K       L F  +A+KSR F +L+A RP +   +E K    RP W PPP VFP +W TIGILR VSS +VWEA+G +++  P+ AM+ HLS+GDTWN+INNVE+R G AV  V  VW SV    + Y+QT+P AG+I+ PSV+W++IA++L+  IW+LNG EP+ P K
Sbjct:   65 TVVEVALLSAAMFAVQTIGGYLPPIGYK---CLAILFFASMALKSRIFSILDASRPTMGEVQETK----RPSWTPPPIVFPIVWSTIGILRTVSSVVVWEAVGRQMLVLPLIAMMTHLSIGDTWNNINNVERRKGSAVAGVAFVWTSVVTCTYLYWQTIPLAGMILAPSVLWLSIASVLIFNIWKLNGYEPILPYK 253
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BLAST of mRNA_M-pyrifera_M_contig812.18995.1 vs. uniprot
Match: A0A7S2Y3H3_9STRA (Hypothetical protein n=2 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2Y3H3_9STRA)

HSP 1 Score: 191 bits (484), Expect = 1.130e-53
Identity = 95/201 (47.26%), Postives = 129/201 (64.18%), Query Frame = 2 
Query:    2 YVAGTGVEFGIIMGGLSLLQGGVLPRLGAKWAKATVFLTF-GFLAMKSRTFG-VLNARRPKVSVEKEAKSERRRPDWMPPPKVFPFIWITIGILRAVSSTLVWEALGNKLVTTPIAAMVLHLSVGDTWNHINNVEKRLGVAVPVVFLVWLSVANTAFRYYQTLPKAGLIILPSVIWIAIANLLVQAIWRLNGKEPLYPAKK 598
            Y+  T V+ G+I   L +    +   +  K AK  + + F  F+++KSR F   L+  RP +  EK  + +R+ P W PPP  FPFIW+TI  LRA SST+VWEA    L+  P+ + +LHLS+GDTWN INNVE+R+G +V  V LVWLSV N    Y+     AGL++LPS IWI+IA +L+ +IW LNGKEPL+P KK
Sbjct:  114 YIGATSVQIGLISLFLKVADFVMEQYISNKLAKKGIVIAFFAFMSLKSRVFSPFLDNSRPSLKSEKSNRQKRKTPSWTPPPIAFPFIWLTIACLRATSSTMVWEAKNCTLLNAPVLSFMLHLSIGDTWNCINNVERRMGASVSAVILVWLSVINAVRMYWGVSKTAGLVLLPSAIWISIATVLITSIWNLNGKEPLFPVKK 314
[Close]
BLAST of mRNA_M-pyrifera_M_contig812.18995.1 vs. uniprot
Match: A0A7S0S4Y6_9CHLO (Hypothetical protein n=1 Tax=Chlamydomonas leiostraca TaxID=1034604 RepID=A0A7S0S4Y6_9CHLO)

HSP 1 Score: 187 bits (474), Expect = 1.340e-52
Identity = 91/180 (50.56%), Postives = 114/180 (63.33%), Query Frame = 2 
Query:   56 LQGGVLPRLGAKWAKATVFLTFGFLAMKSRTFGVLNARRPKVSVEKEAKSERRRPDWMPPPKVFPFIWITIGILRAVSSTLVWEALGNKLVTTPIAAMVLHLSVGDTWNHINNVEKRLGVAVPVVFLVWLSVANTAFRYYQTLPKAGLIILPSVIWIAIANLLVQAIWRLNGKEPLYPAK 595
            L GGV     AKW     FL     ++KSR F  L+A RP +  EK+A S+R+RP WMPPP  FP +W TIG+LR +SS +VWEA G      P+    LHL+VGD WNHINNVE+R GVAVP V     S       YY T   AGL++ PS +WI+IA+LL+ +IW LNG++PLYP K
Sbjct:   99 LPGGVEGADAAKWLVTAFFLV---TSIKSRIFSPLDASRPTLKGEKKAMSDRKRPSWMPPPVTFPIVWSTIGLLRGISSVMVWEACGRDATALPLVVFCLHLAVGDCWNHINNVERRAGVAVPGVLCCLASCVAAVAAYYNTDTTAGLVLAPSAVWISIASLLIYSIWDLNGRDPLYPTK 275
[Close]
BLAST of mRNA_M-pyrifera_M_contig812.18995.1 vs. uniprot
Match: A0A7S1JAC1_9EUGL (Hypothetical protein n=1 Tax=Eutreptiella gymnastica TaxID=73025 RepID=A0A7S1JAC1_9EUGL)

HSP 1 Score: 189 bits (480), Expect = 1.920e-52
Identity = 99/203 (48.77%), Postives = 128/203 (63.05%), Query Frame = 2 
Query:    2 YVAGTGVEFGIIMGGLSLLQ--GGVLPRLGAKWAKATVFLT--FGFLAMKSRTFGVLNARRPKVSVEKEAKSERRRPDWMPPPKVFPFIWITIGILRAVSSTLVWEALGNKLVTTPIAAMVLHLSVGDTWNHINNVEKRLGVAVPVVFLVWLSVANTAFRYYQTLPKAGLIILPSVIWIAIANLLVQAIWRLNGKEPLYPAKK 598
            Y+  T +++G+I+G L +L   G  L  LGA  A   + +T  F F A+KSR F  L+  RP V+ EK+A  ER RP WMPPP VFP +W TI +LR V+  +VW A G  L+  PI A  L LS+GDTWN INNVE+R+G A   V +VWLS   T   YY   P AGL++    +W+ IA +LV +IWRLNG EP+YP KK
Sbjct:  169 YIGATAMQWGLILGTLWVLDKVGPYLVGLGAPAAVPQLLVTLFFAFTALKSRVFSPLDNSRPTVAKEKQAIDERIRPSWMPPPLVFPIVWTTIAVLRTVAGVMVWLAAGKTLLVAPIMAHFLMLSIGDTWNTINNVERRMGTAAFGVCVVWLSALVTNIMYYNFYPTAGLVLAFQQVWLTIATVLVNSIWRLNGAEPMYPFKK 371
[Close]
BLAST of mRNA_M-pyrifera_M_contig812.18995.1 vs. uniprot
Match: A0A6V2QN12_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A6V2QN12_HETAK)

HSP 1 Score: 182 bits (463), Expect = 8.350e-51
Identity = 96/207 (46.38%), Postives = 128/207 (61.84%), Query Frame = 2 
Query:    2 YVAGTGVEFGII---MGGLSLLQGGVLPRLGAKWAKATVFLTFGFLAMKSRTFGVLNARRPKVSVEKEAKSERRRPDWMPPPKVFPFIWITIGILRAVSSTLVWEALGNKLVTTPIAAMVLHLSVGDTWNHINNVEKRLGVAVPVVFLVWLSVANTAFRYYQTLPKAGLIILPSVIWIAIANLLVQAIWRLN--GKEPLYPAKKVSP 607
            Y+  TG + G I   M GL+ L   V      +    +VF  F  +++KSR F  L+  RP    + +   E +RP WMPPP  FP IW TIGILR VSS LVW+A+G  L+     A++LHLS+GDTWN INNV++RLG AVP V  VWLSV N    Y+   P AG +I PS +W+++A +LV  +WR+N  G+EPL+P K V+P
Sbjct:   86 YIGATGAQMGFISAFMYGLNFLLSKVSGYPLLQTVVISVF--FAIMSLKSRIFSPLDNSRPSPESQTQRNKEMKRPSWMPPPLAFPIIWSTIGILRTVSSVLVWKAMGRDLLNPATLALMLHLSIGDTWNTINNVDRRLGFAVPGVVCVWLSVLNLVRAYFAASPLAGYVIAPSALWLSVAMVLVTTLWRMNSNGQEPLWPYKVVAP 290
[Close]
BLAST of mRNA_M-pyrifera_M_contig812.18995.1 vs. uniprot
Match: A0A7S0WK81_9CHLO (Hypothetical protein n=1 Tax=Ostreococcus mediterraneus TaxID=1486918 RepID=A0A7S0WK81_9CHLO)

HSP 1 Score: 177 bits (449), Expect = 8.850e-49
Identity = 95/201 (47.26%), Postives = 123/201 (61.19%), Query Frame = 2 
Query:    2 YVAGTGVEFGIIMGGLSLLQGGVLPRLGAKW---AKATVFLTFGFLAMKSRTFGVLNARRPKVSVEKEAKSERRRPDWMPPPKVFPFIWITIGILRAVSSTLVWEALGNKLVTTPIAAMVLHLSVGDTWNHINNVEKRLGVAVPVVFLVWLSVANTAFRYYQTLPKAGLIILPSVIWIAIANLLVQAIWRLNGKEPLYPAK 595
            Y+A T  E G I   L   Q   L  L A     AKA V + F  LA +SR F  LNA RPK++ E++AK ER+RP W PP  VFP +WI++G LR++S+ +V+   G  +V   I A+V HLS+GDTWN INNVEK+LG A   V  V  S  N   +YY  +P AG +I P  +W+ IA+ LV  IW +NGK+PLYP K
Sbjct:   94 YIAATAFEVGAITTALFAAQKFCLGNLHATSLGAAKAIVAVMFFMLAFRSRVFSPLNASRPKIANERKAKQERKRPSWTPPAVVFPLVWISMGFLRSLSTMMVFATTGT-VVHPAIIALVAHLSIGDTWNSINNVEKKLGAAAVGVLFVVSSAYNVVAQYYNVIPTAGYVIAPLAVWLTIASALVWNIWAINGKQPLYPTK 293
[Close]
BLAST of mRNA_M-pyrifera_M_contig812.18995.1 vs. uniprot
Match: A0A7S4LLX5_9EUGL (Hypothetical protein n=1 Tax=Eutreptiella gymnastica TaxID=73025 RepID=A0A7S4LLX5_9EUGL)

HSP 1 Score: 179 bits (454), Expect = 1.430e-48
Identity = 92/206 (44.66%), Postives = 126/206 (61.17%), Query Frame = 2 
Query:    2 YVAGTGVEFGIIMGGLSLLQ--------GGVLPRLGAKWAKATVFLTFGFLAMKSRTFGVLNARRPKVSVEKEAKSERRRPDWMPPPKVFPFIWITIGILRAVSSTLVWEALGNKLVTTPIAAMVLHLSVGDTWNHINNVEKRLGVAVPVVFLVWLSVANTAFRYYQTLPKAGLIILPSVIWIAIANLLVQAIWRLNGKEPLYPAK 595
            Y+  TG+++ ++M  L +L         G  LP L  +     V L F F ++KSR F  L+  RP V+ E++   E++RP WMPPP VFP +W +I +LR +S  ++W  LG  L+ TPI    L LS+GDT+N INNVEKR+G A   V  VW +     + YYQ LP AGL++LP  IW++IA  L+ +IWRLNG EPLYP K
Sbjct:  177 YLGATGLQWTLLMATLWVLDQTNAYLVAGLGLPVLVPQ---VLVVLFFAFTSLKSRVFSPLDNSRPTVNKEQKEIDEKKRPSWMPPPLVFPIVWTSIAVLRTISGYMIWNGLGQTLLVTPIMVYFLGLSIGDTFNTINNVEKRMGTAFIAVLFVWSTFLAVNYIYYQALPTAGLVLLPQSIWLSIATCLIYSIWRLNGAEPLYPYK 379
[Close]
BLAST of mRNA_M-pyrifera_M_contig812.18995.1 vs. uniprot
Match: C1E6Y7_MICCC (Tryptophan-rich sensory-like protein n=2 Tax=Micromonas TaxID=38832 RepID=C1E6Y7_MICCC)

HSP 1 Score: 176 bits (445), Expect = 2.600e-47
Identity = 99/204 (48.53%), Postives = 124/204 (60.78%), Query Frame = 2 
Query:    2 YVAGTGVEFGIIMGGLSLLQGGVLPR-LGAKWAKATVFLTFGFLAMKSRTFGVLNARRPKVSVEKEAKSERRRPDWMPPPKVFPFIWITIGILRAVSSTLVWEALGNKLVTTPIAAMVLHLSVGDTWNHINNVEKRLGVAVPVVFLVWLSVANTAFRYYQTLPKAGLIILPSVIWIAIANLLVQAIWRLNGKE-----PLYPAK 595
            Y   T V+F +++     L  G+    L   + KA V   FGF A+KSR F  LNA RPKV  EK+A  ERRRP WMPPP  FP IW TI +LRAVSS +V+   G  L      AM+LHL+VGDTWN INN EKRLG AV  V  V  SV N  ++Y+   P AG++I PS +WI +A +LV  IW++N +E     PL+P K
Sbjct:  171 YFLCTAVQFSVMVWFSMWLNVGISRSPLDLTYQKALVGAWFGFNALKSRVFSPLNASRPKVEGEKDAIKERRRPSWMPPPIAFPIIWTTIAVLRAVSSVVVFSTTGT-LNNPAHFAMLLHLAVGDTWNSINNAEKRLGTAVVGVCAVLASVYNVVYQYWSVTPTAGVLIAPSAVWITVATVLVYTIWKINPREDGTREPLWPMK 373
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig812.18995.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FNA8_ECTSI2.900e-10376.12Tryptophan-rich sensory-like protein n=2 Tax=Ectoc... [more]
A0A4D9CZE4_9STRA6.530e-5555.29Uncharacterized protein n=1 Tax=Nannochloropsis sa... [more]
L1JGW3_GUITC9.570e-5448.47Uncharacterized protein n=2 Tax=Geminigeraceae Tax... [more]
A0A7S2Y3H3_9STRA1.130e-5347.26Hypothetical protein n=2 Tax=Fibrocapsa japonica T... [more]
A0A7S0S4Y6_9CHLO1.340e-5250.56Hypothetical protein n=1 Tax=Chlamydomonas leiostr... [more]
A0A7S1JAC1_9EUGL1.920e-5248.77Hypothetical protein n=1 Tax=Eutreptiella gymnasti... [more]
A0A6V2QN12_HETAK8.350e-5146.38Hypothetical protein n=1 Tax=Heterosigma akashiwo ... [more]
A0A7S0WK81_9CHLO8.850e-4947.26Hypothetical protein n=1 Tax=Ostreococcus mediterr... [more]
A0A7S4LLX5_9EUGL1.430e-4844.66Hypothetical protein n=1 Tax=Eutreptiella gymnasti... [more]
C1E6Y7_MICCC2.600e-4748.53Tryptophan-rich sensory-like protein n=2 Tax=Micro... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig812contigM-pyrifera_M_contig812:6133..14248 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-19
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score307.8
Seed ortholog evalue3.6e-81
Seed eggNOG ortholog2880.D7FNA8
KEGG koko:K05770
KEGG TC9.A.24
KEGG Pathwayko04080,ko04214,ko04979,ko05166,map04080,map04214,map04979,map05166
Hectar predicted targeting categorymitochondrion
EggNOG free text desc.TspO/MBR family
EggNOG OGs2S3PT@2759,COG3476@1
Ec32 ortholog descriptionTspO/MBR-related protein
Ec32 orthologEc-24_000050.1
COG Functional cat.T
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko02000
Exons6
Model size1288
Cds size573
Stop1
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig812.18995.1prot_M-pyrifera_M_contig812.18995.1Macrocystis pyrifera P11B4 malepolypeptideM-pyrifera_M_contig812 6170..13570 +


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622816717.9911773-UTR-M-pyrifera_M_contig812:6132..61691622816717.9911773-UTR-M-pyrifera_M_contig812:6132..6169Macrocystis pyrifera P11B4 maleUTRM-pyrifera_M_contig812 6133..6169 +
1692278138.0144167-UTR-M-pyrifera_M_contig812:6132..61691692278138.0144167-UTR-M-pyrifera_M_contig812:6132..6169Macrocystis pyrifera P11B4 maleUTRM-pyrifera_M_contig812 6133..6169 +
1622816718.0887256-UTR-M-pyrifera_M_contig812:13570..142481622816718.0887256-UTR-M-pyrifera_M_contig812:13570..14248Macrocystis pyrifera P11B4 maleUTRM-pyrifera_M_contig812 13571..14248 +
1692278138.0932424-UTR-M-pyrifera_M_contig812:13570..142481692278138.0932424-UTR-M-pyrifera_M_contig812:13570..14248Macrocystis pyrifera P11B4 maleUTRM-pyrifera_M_contig812 13571..14248 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622816718.0039337-CDS-M-pyrifera_M_contig812:6169..61721622816718.0039337-CDS-M-pyrifera_M_contig812:6169..6172Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig812 6170..6172 +
1692278138.0275333-CDS-M-pyrifera_M_contig812:6169..61721692278138.0275333-CDS-M-pyrifera_M_contig812:6169..6172Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig812 6170..6172 +
1622816718.0183966-CDS-M-pyrifera_M_contig812:7186..72901622816718.0183966-CDS-M-pyrifera_M_contig812:7186..7290Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig812 7187..7290 +
1692278138.0380025-CDS-M-pyrifera_M_contig812:7186..72901692278138.0380025-CDS-M-pyrifera_M_contig812:7186..7290Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig812 7187..7290 +
1622816718.0353544-CDS-M-pyrifera_M_contig812:10441..105951622816718.0353544-CDS-M-pyrifera_M_contig812:10441..10595Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig812 10442..10595 +
1692278138.048794-CDS-M-pyrifera_M_contig812:10441..105951692278138.048794-CDS-M-pyrifera_M_contig812:10441..10595Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig812 10442..10595 +
1622816718.049424-CDS-M-pyrifera_M_contig812:11624..117651622816718.049424-CDS-M-pyrifera_M_contig812:11624..11765Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig812 11625..11765 +
1692278138.0635781-CDS-M-pyrifera_M_contig812:11624..117651692278138.0635781-CDS-M-pyrifera_M_contig812:11624..11765Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig812 11625..11765 +
1622816718.0656023-CDS-M-pyrifera_M_contig812:12621..127151622816718.0656023-CDS-M-pyrifera_M_contig812:12621..12715Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig812 12622..12715 +
1692278138.073072-CDS-M-pyrifera_M_contig812:12621..127151692278138.073072-CDS-M-pyrifera_M_contig812:12621..12715Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig812 12622..12715 +
1622816718.0781958-CDS-M-pyrifera_M_contig812:13493..135701622816718.0781958-CDS-M-pyrifera_M_contig812:13493..13570Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig812 13494..13570 +
1692278138.0813277-CDS-M-pyrifera_M_contig812:13493..135701692278138.0813277-CDS-M-pyrifera_M_contig812:13493..13570Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig812 13494..13570 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_M-pyrifera_M_contig812.18995.1

>prot_M-pyrifera_M_contig812.18995.1 ID=prot_M-pyrifera_M_contig812.18995.1|Name=mRNA_M-pyrifera_M_contig812.18995.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=191bp
MGGLSLLQGGVLPRLGAKWAKATVFLTFGFLAMKSRTFGVLNARRPKVSV
EKEAKSERRRPDWMPPPKVFPFIWITIGILRAVSSTLVWEALGNKLVTTP
IAAMVLHLSVGDTWNHINNVEKRLGVAVPVVFLVWLSVANTAFRYYQTLP
KAGLIILPSVIWIAIANLLVQAIWRLNGKEPLYPAKKVSP*
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mRNA from alignment at M-pyrifera_M_contig812:6133..14248+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_M-pyrifera_M_contig812.18995.1 ID=mRNA_M-pyrifera_M_contig812.18995.1|Name=mRNA_M-pyrifera_M_contig812.18995.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=8116bp|location=Sequence derived from alignment at M-pyrifera_M_contig812:6133..14248+ (Macrocystis pyrifera P11B4 male)
GTACGTCGCTGGAACGGGGGTAGAGTTCGGCATCATCATGGTGAGAGTGA
GAGGGCGTCCCGAACGTGCCCAAAGCATAAACTACCACTAGACTTCGAGA
CGTCCATTGATTGATGCAGAACGGGCTCGACCGTCGAGAAGTTGCCTGTA
CTCCATTGCCGGTGGTTCCTTGTGTTGATAGCATTATTGGAGGGTGGGAA
AACGATCGTTGCCTGCAATAGGGGGGCATATTGTTACTTTCGCTGGAGAC
GGAGCATGCGGAGTTTTCTTTAGATGCCGCCTCGATACATGAGTTCCTCC
TTTATGATCCCTTGGTGCGTTCACTTTGGGTGTTTTCTTGGGAATTTCCG
GCTTGAGTCACCTGAGCTACGAAAATAGTATAAACCAGTACGTGCCTCGT
ACCAGGTGTGTGTTTTTGTTTCGTGCTGTTGTGCCCAGCTTATATGGAAC
GCTTGTTCTGTATTGTTTTTGGCGTTCATCTGAATGAGTCACCTTGTAGT
ACAGCTGGGTGTGGCAAACACACACACACTTCAGTTTGCCTGGTTGGGGA
GTAGCCCTGTGGTCTACAGTGCTTCGGCATCTTTTTTTTTGTAGCTCTAC
CTTTCGTTTATTCGCTTGAGCTGTGCGATTTTGAAGAAGTTACACAAACC
GCTGTGCCCGTAGTGATAGAATTCGATATTATTAACACGTTTCGAGTGTA
ATGGCGCAATGTACGAAGCTTGGCTGACAATGGGCATACCTGGTTCGTGT
TAATCATACTGGTAATATTTTTGTGTACTTGTACTTGTCGTGCTCTACAG
ACGTTGCTGGCCGTACTATGTCTAAACCTTTTTTGAGTTCTCATCGAAAC
GTACAACATGTGGTGCGATCGTTGCGGTACACACCGAGTGCTGCATCACC
AAGTACGGAATGCTCGTTATTATGGTTTTATGCAAGTCCTGCATCACGAA
ATATACTTTTTTATCTCAAGCAAGCATTGCATCAATTGGCACGCTCTTTT
TCTACCTCCATCACGAAAAAAATCGTGTGTGTTTTTTCATACCTACTGTT
CCAGGGCGGGCTCTCATTGCTCCAAGGGGGCGTGCTTCCGAGGCTCGGCG
CGAAGTGGGCCAAAGCCACGGTGTTTCTGACCTTCGGATTCCTGGCCATG
AAGTCCAGGTGATATTTATGTAGCATGCGGCGAAGCGCGGTTCGCCTGAC
AAACATTTGGTGTGTACTACGAACGAGTCAAATTGACGCACGGCACGCAG
TTTTTGCGTGTGCAAGCGTGCTGAGCTTGAGCTTTAGTTCCACCCATCCG
CTGGAGAAGAATCAAAACGAAAACATCAACTGCTCGATTCCAGCGCCCTA
ACAGCACGAGTAGCGGGTCAAAACGCCTATTTTTTAGACACCCCTTCAAT
ATTCGAAATATTGCTGCGGGCTATAAAACGGTTCGACCGGTGTTGACGAC
TCGGGGTCAGCATGTTTTTTTTTCTCCTTGTGATTGCTGACAATGAAGAC
CAAGCTGAGCATTTTATTGAGGTTTTGTCCCGGTTCATCCGGCCGAATTT
TGACCCTGGCGCTTCGCCCATGCATAAAAACGATTCCTGTAATTTAAGTT
TGCTGCTATAGCGATATTTGGCGCTGCCGCTGGTCATTAAATGCAAGTAT
TTTGTTGGAAGCGGCCTTCTGTGCCGAAGCAGGCGGGCCCCGTCCGGGAT
AAACCATCGCGTTCAGTGTGCTCAAAGCGGCGACCATCCCTCGGAATGAA
ATGACCTTGCAAAAACAAAAAAAACTGCTTCGCCTTCAGCAAGAGTGGGA
AGGTCTTCATTTTCCCTCTACCCTCCTTCTTATCGCGGGTTTTGGCCAAA
CGTTCGGGGAATGATAAAACCTTCGATCGCATTTCCAAGATAATTCGGAC
CAGAAGTAGTGGAACCAACTTTGTCCCAATCCTGGGTCCATTTGATTGGG
TCACGATTTTGCTGCTGCTTCACTCTGTGCTGCCACCAACATATCCAATG
TTTAATTTGATTGGATTGGATTAGGCTTCCAGCTCCGGCTAGTAGTCCCA
GTCATACCTCGTTGCGTTCTTAGGTGTGTCATTGACCACCGGCCTGGTGC
TGTGTTGTCACACTAAAGATGTGTATAGATCAGAAGCGAGGAGACTTTGC
CGTGTTCTTGTGATATACTTGGTATTGCGCACCAGGTCTGTGGTGGTGTA
TTGAAGGATATGATGCGAGAGTCGCGATATATCTGAAACAACAAGTATAT
CGTATACTTTGTTCAAGATAATCAAGATTACATACCCCCTGGGACGAATT
TCCGAGCCGAGTTTCTCCAAACTCGCAAGGACACACAACGAAAACAGTGA
CTTTGGAAATATCTTGTGGAGATATGTCTCCATAGACACATCGCTCGGTG
CTTGCACCCTGCCAGTTGTCGGGAAAATCGGCTTCTAAAATCGTCCGAGG
GGATGTGTTATCTTATTACACGGGTGCTACAGTAGTCTTATAGTGCCATA
CGGTAGTCAAGGCGGAGCCACGGTAGCTGGTGTCCCGATACTATTTCCCT
GCGAGTTGCTCGCACGATGTGTGCTTGTGCGTGCCACGATGTGTGCCTGC
GCCTGCGTGGTTCATACGTGTGATACAGGCGCGAGGCCTCAGCGTTTTGG
AGATGTGCGTAACAACTACTCTGCCACCGGCAGGGCCGTCACTGGCAGGT
CACCCGTGGCAGAGACAACTTGGGAGATAGCTCCCATTTATGTGCAAAGT
AAGGACATATTAATACAAGAAGAATGTTTGTATTGTCTTGACTTGAAGTA
GCTGGGACTTACGGCAGCCCTGTTGTGGGTCTGCGCCGACGAGGTCAGCT
GGTCGACCTGTACGCAAAACATGCCAATTTTATTAAACTTAACGTGACTG
GGACAAATGCGAACTATAGGGCTGACCTGCGCCGACGAGTACCCCTTGTC
TGTTGATATACAAGGCTACGGTCCCCCCGCTACCCTGCGGCCGCCCGTCC
TCCTCGCCCCTGTCCCTCCGCACCCCCCCTGCCTCGTTCCAGCCCCCAGC
CCTCCGTGCAGTTAATGGCCGTTTCGGTTGGGGGCACGCGTCTGCGCAAT
GCCCGCCCATCTTGCAGTTACGGTACACTGAAGGCGCACTGTTTGTGGTG
GCGACCGGGGCAAGTGCGTCTACTATTGTCGTATGTACGAGGTGACGCCC
TGGACGGGCGTAAAAGTCTGCTGGGGGTACTCCAGCTTTTGGTTGAAATG
CTCGCACGCCTGCAGGTTCCGGTTGGACGGAGGGGCGGGCGGGCCTTGAC
CAGCCTTTCCCCAGTGCCGGCGTTGGACCGGCCGCCGCGCCCTTGCCCAT
GAGGAAGGGCTGGTGGCGGCATTGGTGTGACCGCTCCATATGCCCCCACT
AGCAGGGTATAAACCCGTGCCACACGCGGCAGTGGGCCTTGGTGTGGGGT
GGTGAAGGGATAGGCTGCCCAAGCGGTGGCACTAAAGGGTCCGCCGGCGG
GTGTAGCGGGCTACTCTCGGCTATAGCCCACACCGCGCGCTACGGAGCCG
CATCTCGCACGACTAGCGGTCGGGCAGCCTCCCCCTCCACGGCTCCGCAC
CAAGCAAGGCTCACCACCGCGCGGGCCACAGATGTATACCCCGCCGGTTG
AAGCGTATGGAGCCGCCGCCAACCCTCCCTCGTGGACAAAGGCGCGGCGG
CCGGTCCAACGCCGGCACCGGGGGAAAGGATGGTCAGGACCCGCCTGCCA
CCCCATCCAGCCGAAACTTGCAGGCGTGCGAGCATACCGACGCTGAAGGA
CCTCCAGCAAACCTTTAGGCCGGTCCGGGGCACCCCCCCTTACACACGAC
AACTGTACAGGCGCTTCGTGGAACCCCAAACGACACCACAAGCAGTGCGC
CTTCACAGTTTGCCGCATCTGCAACCTGGGTGGGCATCGCGCAGACGTGT
GCCCGCAACCAAAACGAACCTGAACCCCTTGCAACACTGAAAAAAGTATC
CCACACCAACTCAGAGTATGTTATCCCCAAAAATATGGCCGCCGTTCTAT
AAAAGCGTTAACCGCGCGGATGGTGGGAATGAGACCGAGGGGGGTCGAAA
GGGGAGTGCGCAGTGACAGAGTCGGGGGGGGCGGGCGGCCGCGGAGTACG
AGCCGACGCCTGTGGAGTTCACTACTAACAGGCTGTGTTGCGCCTTTGCC
CTTTCCTGTGGTACTGAGGTTTGTGTTCTGGCCCGACTCTGACGTATGCT
GTGCGTTATCCTTCCGTCTGCCCGCCCGCTCCCTTGTTTGTGTGCACCCC
GGGGGTAAGGACGTTTGGGGTATTGAACGCCCGTCGGCCGAAGGTGTCAG
TCGAGAAGGAAGCCAAGAGCGAACGCCGTCGTCCCGATTGGATGCCGCCT
CCGAAGGTGTTCCCCTTCATCTGGATCACCATCGGCATCCTGAGAGCCGT
CTCTTCTACCTTGGTAAGAGACGAAAGCGCCTTTGGTAAGGCGAACGATT
GGTTCTCGTGATGATAAGCAATGACAGAATAAAGCCATTTAGTGGGCGCG
GTTGGAGAGTACGGTACCAGGCTGGTGTTCAAGCAGGCATCCCTTGTGAC
GCAATGATTTCTTTTATATGGTTCAAGGCGTTGGTCCGCAGATACGGATA
TTCCTTTTTTTCCCTCCCTCACCGTATCAATATGCTTGATGGACGTGAAA
CTCTTGGGATTACGGATGGGGGCGTGCGTGTATTTTTCGGTATGTCTGTA
GCAGGCACAGCTGAAGTCGAAACTGTCGCCGTCAAGGGTCCCGTGCGTTT
GGTATGGTTGAACAACGGTGCTTGCGTTGACCACTCGATCAATGTTGACG
CCGCAGGTCATGGTTGTGTTTTGTGTGTTATTTTCTTGAGGAGGGGGGGA
GGGATACTCTAGGGGTTGGATTGGGTCTTCGCCCGTACCGTTTGGATACT
CTCACGTGACCTCATCTGCGTGAAATCTACAAAATTGGGACAGTGTTTAA
TTTGTGTCGGTTTTGACTCGGCCTCCCGAACGCTACGCAGTTTTGCTGAG
CCCGGTGATAAAAAACCCGTCGAGTTGTCGATTGCCCTGGGTGTTAGTTC
CATGGTCGTGCGCCTGATGAGGGGTTGAAGTGTTTGTCCAAGCTCGTTTG
GACCGAGAAACATTCACCCCTTTTAGACCCAGGTGAAGATTCCAACAAAG
TGTCAAGAGCGGATATCATCAACCGTCCTCTATGGTATGGGCGCGCCGTA
GAAGTAACATCATGCGGCGGGCGTGTCTGACAACTTCTTGCGTTGAAGCC
CGGGTACTCAAATTACTCCATGTCTACCCCAGTAGTACCATAGCCTGGGT
TGCTGCAATGCTTCGTATGGCCATAGCTGTACTATAGTCAAGTCGCGTTT
TTCGACACCTTTTCGCCGTCAAGGCATGCCTTCGAGTGCCAAAAGGGCTA
GGGTTCCCGTGATGTTCGGCTTTCGTCGGACCGACTGCGCAGGTGTGGGA
AGCCCTCGGCAACAAGCTGGTGACAACTCCGATTGCGGCCATGGTGCTCC
ACCTCAGCGTCGGCGACACGTGGAACCACATCAACAACGTCGAGAAACGA
CTGGGGGTAGCTGTCCCCGTGGTCTTCCTCGTGGTGCGCCGATTTTTTTG
GGTGTTTCGTTTAGTGTCGACGACATTTGGCATCCTACGCTTGGTTTGAT
GTGATTTCGATTTGCTATCCTCCCGCGGTTTGACTAAAACGATGGCTAAT
GCTAGACTGCAACGAAAACAATATCTAGACCTCTACTGATTGGACGCAGC
CGAATCCGCTGTTGGTAGGACTGCCTATTCGCTCGGGATAGGTACAGACA
GCGACAATAGCAAATACGCTATTACGGGGGTCCATAGTTTATAGGACCTA
TGGTACGAATAAAAACCTATATATTTACCTATTTTTACTAACAATATGTG
GTCCTATCTATACTATGGTCCCCCGTAATACCAAGTGCCCCCAAGATTCG
CTGGTTCATGAAAAATGCATCTTCTCGGTCTAGTGTATTGCTTCTCAGGA
GGGAGACACAAAACACAAGACGTCGGGCGGTATGTGGCAGATGTGAAATG
ACCCGGTCGTTACATCTTCCCGCCAAGGTAGCAGAGTTCAGAGCTCTAAG
TTTAGCTGTAGCCCTCATTGACGCTAGGGTAACGGACTGGCGTTTGTACC
GAAAAACTACGCTGCTGATGGCCAAGAAGTAAAGCCGTTAGCATTGCTTT
GAACGGCACCTTTCCTCGTTTTTTTTGCGTCTTGCGTTGTTTACTGAACA
CCAACAACAGCGTGCTTATCTCTCAAGCACTTTACGTTCGAACAAACATG
GGCTTAACAACGAAAAGTGCGGCGCTATTGCACCTTCTCGAGAAAAAAAA
TCCTCCCGCAGAATGTGTCGCAGGTTAATCGCGTGATTCGATTTGTAATA
CCTTGTCTGCCCTCGTGTGTTCCGCGTGTTTCGCTGCAGTGGCTGAGCGT
GGCCAACACGGCATTCCGCTACTACCAAACGTTGCCTAAGGCAGGCCTGA
TCATCCTGCCCAGCGTAATCTGGATAGCCATCGGTAAGTGAACCTCTTAC
GTTGGCAATTGTGCCAACCCAGGCCTTGAGAGTGTGCGTGGCTCTCACTT
GGTATACTTGAACAGACAGTAGACGATTTCCTGCTGTTGGCACAATAACA
TGTTGCGGCTTTCTCTGGTGCCTCTTGAGTGGACTGTTTGCTTCCCAAGA
GACACCGTTAATTTCCCGTTGTCACAGGAAAATTTTAGGGACTGCTTTCG
TGGAGGGTTGCCCAGCGTAAGGTATACACCAGAACAACTGAGCTACAGTA
CGTGACTATTTTTATTTATTTATTGCGTGTTCCATCCTACAGCTCCCTCC
CTATTAACCGTCGTAACTCAGATCGGGGGTCACAAAGCAGGCTCTTTTCC
CCCCTCCGCACTACGGTGCGTGCCTTACACTTTTATAGCGAGAAATCAAC
GTTATATTCCCTCGTGGACTACACCATAACTACCAAGCCGACTTTTAGGT
CAGCGGTTTTGGTGTAGCAGGTACCTGGTATGTCTATAACGCAAGCGCAA
TCTGGGGTTCCAATCCCCGAATGGTATTTGTTGGCCGTTTTTTTGTTTGA
AGGAAAATACGGAAGTACACACCTGAAGGCCCGTGCACAATGCTCGGTTC
GGGTGTTGCTCGCTTCAACCATATCAGGTACAGTTGTTTGACTAGCAACA
CCCTGCCAGGTTCCGTTGTCCTTCCCAAGAGGGGGGCAGTTTGCTAACCT
CGTGCAACGCCCACGCTTTCCTGCATCGCCCCTCCGAATTTGTACGAAAC
ACGTGCTGAAGCAAACCTGTTGGTGCAGGCTATCTGGCGGCTGAACGGCA
AAGAACCCCTTTACCCTGCAAAGAAGGTCTCACCATGAATGCAAGAGCCC
GGGAAAATGCCTCCAAGAACAAACGAGACCAAAAAGCTGGTGTAGCCTCC
AAGACAAGAGTACTGGCGTAGACGCGTTGGCGGATCGCGTGCGAGCGCTT
GTAGTTGCCTGCTGTTTGGAGCCGTGGGTGCGGTAGCTTGGCGGCGGCGA
TACAAGAGCGCTAATTTCTCAACGGTTATATCCTTGCGGAAATATCGTTT
TCTTTTCGTTGCCACAACGTGCGCGCCGGGGATTGTGACCGACCAGGAAA
CGCTGGTGTTCGCGGGTGATTGCTGCACCGGCACTTACCCCCTACCCAAG
CGTCGCTGTTCAGACATTCTTTGTTCGGGGGACGAGCCAGGGAGGGCGTT
TCATGGCGTTCAACGGCGTGGCTAGCGGCAATATTTGCTTTGCCGGGGTT
GCTGCCTCGTCAGGAAGGCAACCCAGTATCCATGAACCGTTTTTGGCAAA
ACCTGTACAGTGGCCTTGAAACTAGCGGTGCAGATGTTCCAGGATACTAA
CCAAGTTGGCTGGATTCGAACACATGGCGACGTTGTGAGAGCGAAGACAC
ATATCACAAGACCGATTTCATGCGCCAAGAAAGTCGCCGTATAACAACGA
AAAGTCGGCACACTTTGTTCATTGAGCATGCCTACGGTGCCAAATGTGAA
TACATTCATTCAGCTA
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Coding sequence (CDS) from alignment at M-pyrifera_M_contig812:6133..14248+

>mRNA_M-pyrifera_M_contig812.18995.1 ID=mRNA_M-pyrifera_M_contig812.18995.1|Name=mRNA_M-pyrifera_M_contig812.18995.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=1146bp|location=Sequence derived from alignment at M-pyrifera_M_contig812:6133..14248+ (Macrocystis pyrifera P11B4 male)
ATGATGGGCGGGCTCTCATTGCTCCAAGGGGGCGTGCTTCCGAGGCTCGG
CGCGAAGTGGGCCAAAGCCACGGTGTTTCTGACCTTCGGATTCCTGGCCA
TGAAGTCCAGGGCGGGCTCTCATTGCTCCAAGGGGGCGTGCTTCCGAGGC
TCGGCGCGAAGTGGGCCAAAGCCACGGTGTTTCTGACCTTCGGATTCCTG
GCCATGAAGTCCAGGACGTTTGGGGTATTGAACGCCCGTCGGCCGAAGGT
GTCAGTCGAGAAGGAAGCCAAGAGCGAACGCCGTCGTCCCGATTGGATGC
CGCCTCCGAAGGTGTTCCCCTTCATCTGGATCACCATCGGCATCCTGAGA
GCCGTCTCTTCTACCTTGGACGTTTGGGGTATTGAACGCCCGTCGGCCGA
AGGTGTCAGTCGAGAAGGAAGCCAAGAGCGAACGCCGTCGTCCCGATTGG
ATGCCGCCTCCGAAGGTGTTCCCCTTCATCTGGATCACCATCGGCATCCT
GAGAGCCGTCTCTTCTACCTTGGTGTGGGAAGCCCTCGGCAACAAGCTGG
TGACAACTCCGATTGCGGCCATGGTGCTCCACCTCAGCGTCGGCGACACG
TGGAACCACATCAACAACGTCGAGAAACGACTGGGGGTAGCTGTCCCCGT
GGTCTTCCTCGTGGTGTGGGAAGCCCTCGGCAACAAGCTGGTGACAACTC
CGATTGCGGCCATGGTGCTCCACCTCAGCGTCGGCGACACGTGGAACCAC
ATCAACAACGTCGAGAAACGACTGGGGGTAGCTGTCCCCGTGGTCTTCCT
CGTGTGGCTGAGCGTGGCCAACACGGCATTCCGCTACTACCAAACGTTGC
CTAAGGCAGGCCTGATCATCCTGCCCAGCGTAATCTGGATAGCCATCGTG
GCTGAGCGTGGCCAACACGGCATTCCGCTACTACCAAACGTTGCCTAAGG
CAGGCCTGATCATCCTGCCCAGCGTAATCTGGATAGCCATCGCAAACCTG
TTGGTGCAGGCTATCTGGCGGCTGAACGGCAAAGAACCCCTTTACCCTGC
AAAGAAGGTCTCACCATGACAAACCTGTTGGTGCAGGCTATCTGGCGGCT
GAACGGCAAAGAACCCCTTTACCCTGCAAAGAAGGTCTCACCATGA
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